+D GENES KO
#
KEGG Orthology (KO) - Sphingobium amiense
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sami00010]
D SAMIE_1006230 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007740 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007850 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMIE_1011210 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SAMIE_1009400 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SAMIE_1025690 fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D SAMIE_1008580 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMIE_1005440 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SAMIE_1008560 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SAMIE_1008570 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SAMIE_1005670 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_1000590 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_2000290 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_5000280 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_6000160 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_1014830 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMIE_1020920 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SAMIE_1006670 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SAMIE_1011020 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SAMIE_1014810 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMIE_1014800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMIE_1007880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMIE_1032610 dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1000380 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_2000240 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_1011120 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_3001470 alcohol dehydrogenase Adh K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_3001480 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D SAMIE_1026420 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMIE_1030340 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SAMIE_1000770 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SAMIE_1003990 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SAMIE_1006610 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMIE_1011360 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_1022170 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_2000530 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:sami00020]
D SAMIE_1013360 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SAMIE_1033830 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1]
D SAMIE_1003690 aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SAMIE_1009480 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SAMIE_1003600 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SAMIE_1003610 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1003590 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SAMIE_1016450 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SAMIE_1020820 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SAMIE_1003540 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SAMIE_1020840 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SAMIE_1020830 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SAMIE_1027540 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SAMIE_1024760 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SAMIE_1003580 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SAMIE_1011360 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_1022170 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_2000530 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_1014810 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMIE_1014800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMIE_1007880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMIE_1032610 dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:sami00030]
D SAMIE_1007850 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMIE_1006250 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SAMIE_1006290 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D SAMIE_1027970 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMIE_1008550 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SAMIE_1018240 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SAMIE_1012410 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMIE_1006610 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMIE_1011160 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMIE_1028200 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMIE_3000930 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMIE_1006240 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D SAMIE_1006220 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SAMIE_1026930 hypothetical protein K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D SAMIE_1002070 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SAMIE_1030540 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D SAMIE_1008580 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMIE_1009400 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SAMIE_1025690 fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D SAMIE_1011210 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:sami00040]
D SAMIE_1004100 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D SAMIE_1004080 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D SAMIE_1004110 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D SAMIE_1026610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1032430 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1027910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMIE_1027970 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMIE_1004020 NAD(P)-dependent oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D SAMIE_1004010 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110]
D SAMIE_1002350 dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D SAMIE_1002340 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:sami00051]
D SAMIE_1007080 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SAMIE_1023320 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SAMIE_1026590 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMIE_2000400 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMIE_1027790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_1028750 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_2000370 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_1027800 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SAMIE_2000410 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SAMIE_1011210 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SAMIE_1009400 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SAMIE_1025690 fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D SAMIE_1007160 mannitol dehydrogenase family protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D SAMIE_1008580 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMIE_1005440 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SAMIE_1012410 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMIE_1022120 PTS fructose transporter subunit II K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:sami00052]
D SAMIE_1000770 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SAMIE_1003990 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SAMIE_1006310 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SAMIE_1027910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMIE_1006610 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMIE_1006230 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007740 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1002470 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SAMIE_1002550 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SAMIE_1034070 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SAMIE_1011210 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SAMIE_1002530 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D SAMIE_1002330 gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]
D SAMIE_1002590 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D SAMIE_1002580 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D SAMIE_1029750 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SAMIE_1029760 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SAMIE_1002520 SIS domain-containing protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:sami00053]
D SAMIE_1026610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1032430 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1002070 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SAMIE_1032270 UDP-glucuronate 5-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1002340 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:sami00500]
D SAMIE_1029750 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SAMIE_1029760 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SAMIE_1023310 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D SAMIE_1027910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMIE_1002090 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1030210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1033960 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1029580 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1033980 glycoside hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SAMIE_1014480 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SAMIE_1014470 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D SAMIE_1025530 glycosyltransferase, exosortase A system-associated K16150 K16150; glycogen synthase [EC:2.4.1.11]
D SAMIE_1014490 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SAMIE_1014500 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SAMIE_1014460 glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D SAMIE_1004180 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D SAMIE_1004160 malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D SAMIE_1004170 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D SAMIE_1012420 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D SAMIE_1012440 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D SAMIE_1006610 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMIE_1006230 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007740 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007850 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMIE_1007080 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SAMIE_1023320 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sami00520]
D SAMIE_1020140 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SAMIE_1007080 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SAMIE_1023320 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SAMIE_1009460 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SAMIE_1019680 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SAMIE_1009440 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SAMIE_1015040 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D SAMIE_1012910 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D SAMIE_1012920 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D SAMIE_1000970 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMIE_1019950 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SAMIE_1014260 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SAMIE_1014250 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SAMIE_1000730 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D SAMIE_1034050 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D SAMIE_1022860 carbohydrate-binding protein K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D SAMIE_1034100 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D SAMIE_1034140 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D SAMIE_1006230 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007740 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1006610 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMIE_1027910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMIE_1026610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1032430 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1006310 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SAMIE_1032270 UDP-glucuronate 5-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SAMIE_1022120 PTS fructose transporter subunit II K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SAMIE_1007850 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMIE_1026590 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMIE_2000400 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMIE_1027790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_1028750 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_2000370 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_1027800 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SAMIE_2000410 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SAMIE_1014480 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:sami00620]
D SAMIE_1026420 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMIE_1014810 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMIE_1014800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMIE_1007880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMIE_1032610 dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1011120 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_3001470 alcohol dehydrogenase Adh K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_1000380 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_2000240 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_1001370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_1011740 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_3001040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_1001380 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1011750 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_3001050 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1020920 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SAMIE_1009670 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SAMIE_1000280 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMIE_1000270 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMIE_1008200 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_3001480 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D SAMIE_1030340 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SAMIE_1023110 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SAMIE_2001100 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SAMIE_1027360 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SAMIE_1027370 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SAMIE_1027430 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SAMIE_1013760 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SAMIE_1028630 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SAMIE_1003580 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SAMIE_1027540 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SAMIE_1024760 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SAMIE_1026210 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SAMIE_1011360 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_1022170 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_2000530 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMIE_1006670 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SAMIE_1011020 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SAMIE_1013740 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1014700 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sami00630]
D SAMIE_1021110 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D SAMIE_1026420 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMIE_1013740 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D SAMIE_1003580 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SAMIE_1013360 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SAMIE_1033830 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1]
D SAMIE_1003690 aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1001420 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SAMIE_1001440 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SAMIE_1020460 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SAMIE_1012640 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D SAMIE_1022050 CoA ester lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30]
D SAMIE_1012670 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D SAMIE_1012630 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D SAMIE_1012650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SAMIE_1004780 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D SAMIE_1005260 catalase K03781 katE; catalase [EC:1.11.1.6]
D SAMIE_2001380 catalase K03781 katE; catalase [EC:1.11.1.6]
D SAMIE_1003670 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D SAMIE_1009430 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SAMIE_1024840 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SAMIE_1002710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1013400 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1012400 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1035170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1019860 aminomethyl-transferring glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SAMIE_1019850 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SAMIE_1019880 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1019870 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SAMIE_1034780 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D SAMIE_1021780 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D SAMIE_1006220 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SAMIE_1000370 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SAMIE_1000360 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SAMIE_1000350 NADH-quinone oxidoreductase subunit K00127 fdoI; formate dehydrogenase subunit gamma
D SAMIE_1035710 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D SAMIE_1005620 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:sami00640]
D SAMIE_1026420 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMIE_1030340 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SAMIE_1001370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_1011740 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_3001040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_1001380 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1011750 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_3001050 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1008480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMIE_1016310 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMIE_1008490 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMIE_1016320 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMIE_1008500 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMIE_1016330 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1033840 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_2000960 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_4000080 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1009670 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SAMIE_1000280 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMIE_1000270 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMIE_1008200 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SAMIE_1012670 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D SAMIE_1012630 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D SAMIE_1012640 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D SAMIE_1012650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SAMIE_1016450 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SAMIE_1003590 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SAMIE_1029910 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00650 Butanoate metabolism [PATH:sami00650]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1028310 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SAMIE_1015920 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1033840 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_2000960 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_4000080 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_1001390 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SAMIE_1011760 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SAMIE_1012710 alpha/beta hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SAMIE_1022630 class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SAMIE_3001060 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SAMIE_1003720 polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D SAMIE_1001420 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SAMIE_1001440 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SAMIE_1020460 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SAMIE_1020820 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SAMIE_1003540 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SAMIE_1020840 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SAMIE_1020830 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SAMIE_1004700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SAMIE_1033620 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D SAMIE_1033770 enoyl-CoA hydratase K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D SAMIE_1019210 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SAMIE_1022590 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SAMIE_4000260 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SAMIE_1022570 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SAMIE_4000250 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SAMIE_1018000 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D SAMIE_1011140 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D SAMIE_1014640 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMIE_1014660 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMIE_1002760 NAD(P)-dependent oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D SAMIE_1032590 NAD(P)-dependent oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:sami00660]
D SAMIE_1014640 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMIE_1014660 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMIE_1016450 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SAMIE_1003590 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SAMIE_1030460 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D SAMIE_1019200 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1021090 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1019190 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1021080 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1010180 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:sami00562]
D SAMIE_1014140 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SAMIE_1031980 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SAMIE_1024690 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D SAMIE_1034760 sugar phosphate isomerase/epimerase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D SAMIE_1029910 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SAMIE_1005440 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sami00190]
D SAMIE_1014130 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D SAMIE_1014120 NADH-quinone oxidoreductase subunit NuoB K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D SAMIE_1014110 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D SAMIE_1014100 NADH-quinone oxidoreductase subunit NuoD K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D SAMIE_1014090 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D SAMIE_1014080 NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D SAMIE_1014070 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D SAMIE_1014060 NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D SAMIE_1014040 NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D SAMIE_1014030 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D SAMIE_1014020 NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D SAMIE_1014010 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D SAMIE_1014000 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D SAMIE_1013990 NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D SAMIE_1001240 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SAMIE_1005280 carboxymuconolactone decarboxylase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SAMIE_1020820 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SAMIE_1003540 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SAMIE_1020840 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SAMIE_1020830 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SAMIE_1023920 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D SAMIE_1023910 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SAMIE_1023900 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D SAMIE_1033220 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SAMIE_1006050 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D SAMIE_1033240 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D SAMIE_1033210 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D SAMIE_1033200 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D SAMIE_1033230 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D SAMIE_1002360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D SAMIE_1023180 cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SAMIE_3001300 cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SAMIE_1023190 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D SAMIE_3001290 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D SAMIE_1023200 cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D SAMIE_3001280 cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D SAMIE_1006060 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D SAMIE_1006070 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D SAMIE_1006080 ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D SAMIE_1011430 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SAMIE_1011420 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SAMIE_1019240 cytochrome c family protein K08738 CYC; cytochrome c
D SAMIE_1021660 cytochrome c family protein K08738 CYC; cytochrome c
D SAMIE_1018300 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SAMIE_3000970 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SAMIE_1018320 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SAMIE_3001010 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SAMIE_1018310 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SAMIE_3000960 H(+)-transporting ATPase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SAMIE_1018290 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SAMIE_3001000 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SAMIE_1010120 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMIE_3000990 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMIE_1010130 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMIE_1010140 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMIE_3000980 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMIE_1029320 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SAMIE_1021800 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:sami00680]
D SAMIE_1000380 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_2000240 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_1000390 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D SAMIE_1000370 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SAMIE_1000360 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SAMIE_1000350 NADH-quinone oxidoreductase subunit K00127 fdoI; formate dehydrogenase subunit gamma
D SAMIE_1012400 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1035170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1014830 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMIE_1026210 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SAMIE_1003580 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SAMIE_1008580 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMIE_1009400 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SAMIE_1025690 fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D SAMIE_1011210 1-phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SAMIE_1001370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_1011740 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_3001040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_1001380 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1011750 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_3001050 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1026420 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMIE_1011020 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SAMIE_1005670 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_1000590 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_2000290 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_5000280 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_6000160 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_1035680 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SAMIE_1035670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SAMIE_1014620 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:sami00910]
D SAMIE_1022520 NagC family transcriptional regulator K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D SAMIE_3001370 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D SAMIE_1005930 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D SAMIE_1005050 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D SAMIE_1017010 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D SAMIE_1002710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1013400 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1025880 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SAMIE_1025870 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SAMIE_1005180 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D SAMIE_1013230 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D SAMIE_1020400 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sami00920]
D SAMIE_1016900 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SAMIE_1016910 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D SAMIE_1018870 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SAMIE_1030200 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SAMIE_1024480 sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SAMIE_1024470 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SAMIE_1024490 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SAMIE_1010390 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SAMIE_1034650 oxidase K05301 sorA; sulfite dehydrogenase (cytochrome) subunit A [EC:1.8.2.1]
D SAMIE_1034640 cytochrome C K00386 sorB; sulfite dehydrogenase (cytochrome) subunit B [EC:1.8.2.1]
D SAMIE_1010410 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D SAMIE_1011240 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D SAMIE_1024730 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SAMIE_1005900 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMIE_1020350 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMIE_1020080 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SAMIE_1020580 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SAMIE_1033060 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SAMIE_1010210 aminotransferase class V-fold PLP-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D SAMIE_1020760 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D SAMIE_1029880 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D SAMIE_3000890 isoprenylcysteine carboxylmethyltransferase family protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sami00061]
D SAMIE_1009670 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SAMIE_1000280 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMIE_1000270 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMIE_1008200 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SAMIE_1004360 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SAMIE_1027400 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SAMIE_1004390 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SAMIE_1004370 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1004500 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1017100 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1018970 KR domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1031520 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1009610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SAMIE_1001360 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_1035790 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_3001030 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_1022010 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SAMIE_1016820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1027640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031370 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031480 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:sami00071]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1031510 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1015920 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SAMIE_1033840 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_2000960 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_4000080 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_1015970 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_1019060 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_1032470 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_4000120 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_1016820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1027640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031370 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031480 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1022930 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D SAMIE_1004430 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SAMIE_1000380 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_2000240 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_1011120 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_3001470 alcohol dehydrogenase Adh K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:sami00100]
D SAMIE_1021640 sterol desaturase K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sami00561]
D SAMIE_1021780 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1017070 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SAMIE_1027410 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SAMIE_1007780 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SAMIE_1033010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SAMIE_1016840 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D SAMIE_1002470 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SAMIE_1002550 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SAMIE_1034070 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:sami00564]
D SAMIE_1028120 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SAMIE_1017080 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SAMIE_1007780 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SAMIE_1033010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SAMIE_1001350 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_1011730 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_6000120 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_1003470 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D SAMIE_1027450 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SAMIE_1022930 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D SAMIE_1031610 ethanolamine ammonia-lyase subunit EutB K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D SAMIE_1031600 ethanolamine ammonia-lyase subunit EutC K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D SAMIE_1004190 methyltransferase domain-containing protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D SAMIE_1009560 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SAMIE_1009500 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SAMIE_1009490 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SAMIE_1000480 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SAMIE_1011690 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D SAMIE_1005860 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D SAMIE_1007720 DUF3419 domain-containing protein K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
D SAMIE_1007730 methyltransferase domain-containing protein K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase
C 00565 Ether lipid metabolism [PATH:sami00565]
D SAMIE_1001350 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_1011730 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_6000120 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:sami00600]
D SAMIE_1002470 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SAMIE_1002550 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SAMIE_1034070 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D SAMIE_1001350 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_1011730 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_6000120 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D SAMIE_1001350 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_1011730 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_6000120 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:sami00592]
D SAMIE_1001350 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_1011730 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_6000120 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SAMIE_1031510 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:sami01040]
D SAMIE_1030490 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SAMIE_1007890 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D SAMIE_1029400 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sami00230]
D SAMIE_1022480 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SAMIE_1006610 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMIE_1011160 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMIE_1028200 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMIE_3000930 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMIE_1007410 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SAMIE_1028400 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SAMIE_1021840 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SAMIE_1009740 phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D SAMIE_1014220 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMIE_1021830 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SAMIE_1005690 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SAMIE_1005680 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SAMIE_1014200 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SAMIE_1004050 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SAMIE_1027990 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SAMIE_1023890 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SAMIE_1032780 peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SAMIE_1002220 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SAMIE_1019550 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SAMIE_1021010 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SAMIE_1026580 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D SAMIE_1026570 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D SAMIE_1026560 aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D SAMIE_1002730 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1003700 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1035180 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1035370 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1024790 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SAMIE_1027520 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SAMIE_1027500 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SAMIE_1019890 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D SAMIE_1021140 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SAMIE_1021790 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SAMIE_1025380 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SAMIE_1035720 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SAMIE_1012850 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D SAMIE_1024980 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SAMIE_1013110 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SAMIE_1025460 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D SAMIE_1024480 sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SAMIE_1024470 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:sami00240]
D SAMIE_1014900 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SAMIE_1014920 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SAMIE_1017670 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SAMIE_1017680 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SAMIE_1024890 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SAMIE_1026090 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SAMIE_1033190 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SAMIE_1003970 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SAMIE_1009530 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SAMIE_1019550 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SAMIE_1013110 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SAMIE_1026300 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SAMIE_1028820 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SAMIE_1005460 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SAMIE_1013660 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SAMIE_1010350 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SAMIE_1010340 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SAMIE_1027520 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SAMIE_1027500 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SAMIE_1013050 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SAMIE_1036090 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SAMIE_1011150 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D SAMIE_3000920 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D SAMIE_1005540 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SAMIE_1008470 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SAMIE_1033850 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sami00250]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1002170 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SAMIE_1019560 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D SAMIE_1020260 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SAMIE_1008970 asparagine synthetase B family protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SAMIE_1009960 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SAMIE_1000460 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SAMIE_1033880 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SAMIE_1021570 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SAMIE_1035720 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SAMIE_1004050 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SAMIE_1017670 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SAMIE_1004700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SAMIE_1033620 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D SAMIE_1025880 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SAMIE_1025870 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SAMIE_1017010 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D SAMIE_1004140 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SAMIE_1002710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1013400 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1014900 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SAMIE_1014920 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SAMIE_1013690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SAMIE_1014220 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMIE_1009460 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SAMIE_1007410 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sami00260]
D SAMIE_1022020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMIE_1012800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMIE_1025680 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SAMIE_1020190 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D SAMIE_1033260 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SAMIE_1025960 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D SAMIE_1012400 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1035170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1005670 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_1000590 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_2000290 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_5000280 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_6000160 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_1021780 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D SAMIE_1035680 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SAMIE_1035670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SAMIE_1014620 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SAMIE_1007750 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SAMIE_1035220 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SAMIE_1019860 aminomethyl-transferring glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SAMIE_1019850 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SAMIE_1019880 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1019870 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SAMIE_1009500 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SAMIE_1031410 aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D SAMIE_1016620 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SAMIE_1010000 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMIE_1010200 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMIE_1007280 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D SAMIE_1008210 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SAMIE_1008220 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:sami00270]
D SAMIE_1005900 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMIE_1020350 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMIE_1020080 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SAMIE_1020580 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SAMIE_1024740 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SAMIE_1021250 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SAMIE_1021260 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SAMIE_1003040 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SAMIE_3001630 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SAMIE_1023880 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SAMIE_1032780 peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SAMIE_1029250 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D SAMIE_1010030 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SAMIE_1012880 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SAMIE_1022020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMIE_1012800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMIE_1025680 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SAMIE_1033060 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SAMIE_1010210 aminotransferase class V-fold PLP-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D SAMIE_1025950 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMIE_1031860 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SAMIE_1021400 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1024730 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SAMIE_1003580 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SAMIE_1016620 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SAMIE_1035680 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SAMIE_1035670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:sami00280]
D SAMIE_1025950 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMIE_1016300 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D SAMIE_1008480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMIE_1016310 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMIE_1008490 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMIE_1016320 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMIE_1008500 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMIE_1016330 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1033840 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_2000960 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_4000080 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_1015970 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_1019060 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_1032470 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_4000120 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D SAMIE_1029650 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1031510 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SAMIE_1012670 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D SAMIE_1012630 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D SAMIE_1012640 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D SAMIE_1012650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SAMIE_1009990 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D SAMIE_1019100 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D SAMIE_1029850 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D SAMIE_1029910 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1029620 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D SAMIE_1029640 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D SAMIE_1019210 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SAMIE_1022590 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SAMIE_4000260 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SAMIE_1022570 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SAMIE_4000250 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sami00290]
D SAMIE_1010000 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMIE_1010200 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMIE_1019200 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1021090 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1019190 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1021080 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SAMIE_1010180 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SAMIE_1014640 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMIE_1014660 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMIE_1014670 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SAMIE_1016590 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SAMIE_1025950 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMIE_1016300 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D SAMIE_1014700 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:sami00300]
D SAMIE_1025680 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SAMIE_1022020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMIE_1012800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMIE_1033360 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SAMIE_1013590 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SAMIE_1035630 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SAMIE_1024050 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SAMIE_1035230 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SAMIE_1025720 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D SAMIE_1000130 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SAMIE_1022310 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SAMIE_1009860 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SAMIE_1021560 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SAMIE_1020020 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SAMIE_1020010 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:sami00310]
D SAMIE_1003610 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1004700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SAMIE_1025940 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D SAMIE_1000700 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SAMIE_1016250 FAD-binding oxidoreductase K26064 amaD; D-lysine oxidase
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:sami00220]
D SAMIE_1024040 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SAMIE_1033880 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SAMIE_1021570 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SAMIE_1013690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SAMIE_1014220 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMIE_1002710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1013400 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1014900 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SAMIE_1014920 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SAMIE_1017010 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1012970 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D SAMIE_1021700 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SAMIE_1016760 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SAMIE_1024050 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SAMIE_1035230 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:sami00330]
D SAMIE_1002800 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D SAMIE_1026950 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D SAMIE_1002810 hydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D SAMIE_1026940 hydantoinase K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D SAMIE_1012340 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D SAMIE_1012330 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D SAMIE_1007660 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SAMIE_3001630 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SAMIE_1007670 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1007340 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D SAMIE_1007330 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D SAMIE_1010430 succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D SAMIE_1010480 succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D SAMIE_1002920 hypothetical protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D SAMIE_1026350 hypothetical protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D SAMIE_1020270 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SAMIE_1004140 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SAMIE_1017820 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SAMIE_1026480 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SAMIE_1026360 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SAMIE_1034480 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SAMIE_1022710 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1000700 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:sami00340]
D SAMIE_1027720 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SAMIE_1035700 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D SAMIE_1025300 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D SAMIE_1013800 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D SAMIE_1025320 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SAMIE_1025330 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SAMIE_1025310 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SAMIE_1025340 imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SAMIE_1021910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1021920 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1033040 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1008860 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D SAMIE_1028210 histidinol phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D SAMIE_1027710 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1000900 L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:sami00350]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1021910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1021920 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1033040 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1029920 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SAMIE_1030030 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D SAMIE_1029810 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D SAMIE_1030040 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D SAMIE_1025900 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SAMIE_1030250 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SAMIE_1034560 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SAMIE_1033530 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D SAMIE_1000380 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_2000240 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_1011120 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_3001470 alcohol dehydrogenase Adh K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_1030380 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D SAMIE_1033640 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D SAMIE_1033630 4-hydroxy-2-oxoheptanedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D SAMIE_1004700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:sami00360]
D SAMIE_1029930 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SAMIE_1033530 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D SAMIE_1016080 hypothetical protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D SAMIE_1032450 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1028310 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1021910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1021920 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1033040 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1029920 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SAMIE_1000700 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SAMIE_1029720 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D SAMIE_1032690 Rieske (2Fe-2S) protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D SAMIE_1004430 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SAMIE_1034550 3-(3-hydroxyphenyl)propionate hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D SAMIE_2000250 opdA; octylphenol 4-monooxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C 00380 Tryptophan metabolism [PATH:sami00380]
D SAMIE_1035710 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D SAMIE_1003610 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1005050 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D SAMIE_1004780 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D SAMIE_1005260 catalase K03781 katE; catalase [EC:1.11.1.6]
D SAMIE_2001380 catalase K03781 katE; catalase [EC:1.11.1.6]
D SAMIE_1029720 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sami00400]
D SAMIE_1035940 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SAMIE_1009630 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SAMIE_1000290 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SAMIE_1028830 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SAMIE_1009640 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SAMIE_1013650 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SAMIE_1035810 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SAMIE_1005420 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SAMIE_1013280 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SAMIE_1013290 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SAMIE_1008230 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SAMIE_1013300 indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SAMIE_1008210 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SAMIE_1008220 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SAMIE_1033030 prephenate dehydrogenase/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D SAMIE_1021650 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1021910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1021920 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1033040 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1029930 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:sami00410]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1028780 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1033840 hypothetical protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_2000960 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_4000080 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D SAMIE_1029910 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:sami00430]
D SAMIE_1017230 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1017250 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1026100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1000460 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SAMIE_1017010 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D SAMIE_1001380 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1011750 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_3001050 enoyl-CoA hydratase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMIE_1001370 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_1011740 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMIE_3001040 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D SAMIE_1013090 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:sami00450]
D SAMIE_1024740 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SAMIE_1021250 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SAMIE_1021260 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SAMIE_1029250 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D SAMIE_1026010 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SAMIE_1009830 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SAMIE_1029430 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SAMIE_2000470 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SAMIE_1024480 sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SAMIE_1024470 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SAMIE_1013070 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sami00460]
D SAMIE_1002090 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1030210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1033960 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1029580 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1005050 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D SAMIE_1017230 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1017250 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1026100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1020260 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SAMIE_1012400 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1035170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:sami00470]
D SAMIE_1012690 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMIE_1000700 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SAMIE_1019940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMIE_1013690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SAMIE_1014220 phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMIE_1007760 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SAMIE_1019990 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SAMIE_1022870 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D SAMIE_1025590 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D SAMIE_1019560 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D SAMIE_1007280 amino acid deaminase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D SAMIE_1022310 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SAMIE_1009860 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SAMIE_1021560 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SAMIE_1003480 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D SAMIE_1002340 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00480 Glutathione metabolism [PATH:sami00480]
D SAMIE_1017230 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1017250 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1026100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1031860 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SAMIE_1021400 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SAMIE_1002300 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMIE_1016730 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMIE_1023030 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMIE_1029060 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SAMIE_1001270 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1001510 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1003080 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1003340 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1003710 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1004920 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1013730 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1015840 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1019520 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1021100 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1026430 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1026790 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1027530 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1032950 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1007860 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SAMIE_1009480 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SAMIE_1006250 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SAMIE_1003370 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SAMIE_1012860 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D SAMIE_1007660 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SAMIE_3001630 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D SAMIE_1034080 alpha/beta hydrolase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:sami00540]
D SAMIE_1000570 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SAMIE_1026490 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SAMIE_1000580 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SAMIE_1008240 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SAMIE_1008840 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sami00541]
D SAMIE_1027910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMIE_1006310 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SAMIE_1026610 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1032430 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SAMIE_1032270 UDP-glucuronate 5-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SAMIE_1008870 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SAMIE_1008890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SAMIE_1008900 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SAMIE_1008880 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SAMIE_1026590 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMIE_2000400 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMIE_1027790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_1028750 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_2000370 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SAMIE_1027800 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SAMIE_2000410 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SAMIE_1009440 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SAMIE_1014260 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SAMIE_1014250 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:sami00550]
D SAMIE_1000970 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMIE_1019950 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SAMIE_1019960 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SAMIE_1019990 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SAMIE_1020020 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SAMIE_1019940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMIE_1020010 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SAMIE_1009550 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SAMIE_1025860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMIE_1020000 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SAMIE_1019970 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SAMIE_1013450 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMIE_1005830 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1029170 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1035550 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1012220 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SAMIE_1020030 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SAMIE_1013040 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:sami00552]
D SAMIE_1025860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:sami00543]
D SAMIE_1009970 sugar transferase K20997 pslA; polysaccharide biosynthesis protein PslA
D SAMIE_1031990 hypothetical protein K20997 pslA; polysaccharide biosynthesis protein PslA
D SAMIE_1005900 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMIE_1020350 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMIE_1032200 acyltransferase K16568 exoZ; exopolysaccharide production protein ExoZ
D SAMIE_1032260 acyltransferase K16568 exoZ; exopolysaccharide production protein ExoZ
D SAMIE_1032400 acyltransferase K16568 exoZ; exopolysaccharide production protein ExoZ
D SAMIE_1032250 hypothetical protein K25903 pssD; exopolysaccharide biosynthesis glucuronosyltransferase PssD
D SAMIE_1032240 glucuronosyltransferase K25904 pssE; exopolysaccharide biosynthesis glucuronosyltransferase PssE
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sami00730]
D SAMIE_1026620 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SAMIE_1019670 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SAMIE_1013870 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1013880 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1005750 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SAMIE_1000300 thiamine biosynthesis protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SAMIE_1008590 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SAMIE_1029000 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SAMIE_1027690 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SAMIE_1024980 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sami00740]
D SAMIE_1028670 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SAMIE_1027820 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SAMIE_1031390 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SAMIE_1027840 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SAMIE_1027810 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SAMIE_1027830 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SAMIE_1005710 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SAMIE_1018870 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SAMIE_1030200 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SAMIE_1022480 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:sami00750]
D SAMIE_1035760 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SAMIE_1035210 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SAMIE_1035670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SAMIE_1002270 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SAMIE_1033180 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D SAMIE_1033260 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SAMIE_1031420 choline dehydrogenase K18611 K18611; 4-pyridoxate dehydrogenase [EC:1.1.99.42]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sami00760]
D SAMIE_1002170 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SAMIE_1021350 quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SAMIE_1021330 nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SAMIE_1025750 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SAMIE_1013110 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SAMIE_1031960 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D SAMIE_1028190 glutamate--tRNA ligase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SAMIE_1013200 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SAMIE_1013580 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SAMIE_1015150 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SAMIE_1019590 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SAMIE_1019570 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D SAMIE_1004700 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SAMIE_1033620 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:sami00770]
D SAMIE_1014640 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMIE_1014660 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMIE_1014670 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SAMIE_1016590 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SAMIE_1018440 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SAMIE_1028780 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SAMIE_1013970 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D SAMIE_1036100 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SAMIE_1013110 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SAMIE_1009770 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SAMIE_1028840 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SAMIE_1033170 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SAMIE_1025950 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:sami00780]
D SAMIE_1009720 SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D SAMIE_1004390 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SAMIE_1004370 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1004500 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1017100 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1018970 KR domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1031520 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1009610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SAMIE_1001360 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_1035790 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_3001030 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_1019810 aminotransferase class V-fold PLP-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SAMIE_1026250 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SAMIE_1026290 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SAMIE_1026260 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SAMIE_1012660 biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D SAMIE_1013980 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:sami00785]
D SAMIE_1023970 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SAMIE_1013220 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1014810 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMIE_1014800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMIE_1007880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMIE_1032610 dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMIE_1003600 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SAMIE_1003610 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMIE_1008480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMIE_1016310 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMIE_1008490 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMIE_1016320 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMIE_1008500 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMIE_1016330 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMIE_1019860 aminomethyl-transferring glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SAMIE_1019850 glycine dehydrogenase K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SAMIE_1019880 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMIE_1019870 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:sami00790]
D SAMIE_1006360 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SAMIE_1012290 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SAMIE_1005610 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SAMIE_1012510 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SAMIE_1006570 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SAMIE_1019620 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SAMIE_1005700 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SAMIE_1008190 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SAMIE_1028670 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SAMIE_1027820 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SAMIE_1031390 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SAMIE_1035990 aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D SAMIE_1036000 aminobenzoate synthetase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D SAMIE_1029930 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SAMIE_1024000 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SAMIE_1024010 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SAMIE_1024710 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SAMIE_1015140 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SAMIE_1013310 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SAMIE_1005870 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SAMIE_1007560 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SAMIE_1013320 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SAMIE_1006350 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D SAMIE_1021490 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:sami00670]
D SAMIE_1005700 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SAMIE_1021730 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SAMIE_1012400 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1035170 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMIE_1021840 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SAMIE_1027990 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SAMIE_1018200 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SAMIE_1019880 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMIE_1021250 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SAMIE_1021260 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SAMIE_1008470 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SAMIE_1005620 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SAMIE_1005630 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SAMIE_1021240 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SAMIE_1008530 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:sami00860]
D SAMIE_1007750 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SAMIE_1035220 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SAMIE_1013350 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1028180 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1006180 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SAMIE_1028140 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SAMIE_1028150 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SAMIE_1028800 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SAMIE_1023940 oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SAMIE_1023090 coproporphyrinogen dehydrogenase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D SAMIE_1028790 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D SAMIE_1020470 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SAMIE_1021550 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D SAMIE_1010420 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SAMIE_1033220 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SAMIE_1002360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D SAMIE_1032930 cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D SAMIE_1032900 cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D SAMIE_1000930 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SAMIE_1026640 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SAMIE_1026730 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D SAMIE_1026720 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D SAMIE_1026710 pyridoxal phosphate-dependent class II aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC
D SAMIE_1026740 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D SAMIE_1026700 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D SAMIE_1026680 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D SAMIE_1026690 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D SAMIE_1018260 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D SAMIE_1009700 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sami00130]
D SAMIE_1031880 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SAMIE_1022030 bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D SAMIE_1031840 ubiquinone biosynthesis protein UbiH K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D SAMIE_1036130 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SAMIE_1025810 ubiquinone biosynthesis protein UbiB K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D SAMIE_1005010 flavodoxin family protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SAMIE_1005000 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SAMIE_1010240 NAD(P)H quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SAMIE_4000440 NAD(P)H quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SAMIE_1029920 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sami00900]
D SAMIE_1005750 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SAMIE_1009570 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SAMIE_1013190 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D SAMIE_1007610 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SAMIE_1028730 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SAMIE_1020180 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1009760 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SAMIE_1019770 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SAMIE_1009550 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:sami00906]
D SAMIE_1000640 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D SAMIE_1000620 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D SAMIE_1000610 lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D SAMIE_1024750 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:sami00903]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1019300 LLM class flavin-dependent oxidoreductase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107]
D SAMIE_1033590 flavin-dependent oxidoreductase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107]
D SAMIE_2000930 limonene-1,2-epoxide hydrolase K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8]
D SAMIE_1015990 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:sami00907]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1019210 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SAMIE_1031510 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SAMIE_1008550 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:sami00523]
D SAMIE_1008870 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SAMIE_1008890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SAMIE_1008900 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SAMIE_1008880 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:sami01054]
D SAMIE_1019560 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D SAMIE_1012370 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D SAMIE_1008890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:sami00946]
D SAMIE_1002090 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1030210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1033960 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1029580 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids [PATH:sami00996]
D SAMIE_1030330 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61]
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SAMIE_1000520 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1002150 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1013850 SGM family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:sami00332]
D SAMIE_1017820 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SAMIE_1026480 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:sami00261]
D SAMIE_1024480 sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SAMIE_1024470 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SAMIE_1022020 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMIE_1012800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMIE_1033360 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SAMIE_1013590 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sami00521]
D SAMIE_1006230 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007740 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1006610 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMIE_1014140 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SAMIE_1031980 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SAMIE_1008870 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SAMIE_1008890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SAMIE_1008900 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SAMIE_1008880 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SAMIE_1006230 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SAMIE_1007740 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:sami00525]
D SAMIE_1008870 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SAMIE_1008890 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:sami00401]
D SAMIE_1033030 prephenate dehydrogenase/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1021910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1021920 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1033040 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D SAMIE_1002480 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D SAMIE_1002490 hypothetical protein K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D SAMIE_1002500 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D SAMIE_1033990 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D SAMIE_1005420 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SAMIE_1013280 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SAMIE_1004360 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SAMIE_1004370 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1004500 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1017100 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1018970 KR domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1031520 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1001360 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_1035790 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_3001030 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:sami00999]
D SAMIE_1003040 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SAMIE_1028830 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SAMIE_1002090 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1030210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1033960 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SAMIE_1029580 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:sami00362]
D SAMIE_1031510 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SAMIE_4000240 beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D SAMIE_4000340 hqdE; intradiol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
D SAMIE_4000330 hqdD; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D SAMIE_1005270 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D SAMIE_1019090 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D SAMIE_1030400 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SAMIE_1030390 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SAMIE_1030380 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D SAMIE_1030480 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D SAMIE_1030470 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D SAMIE_1030410 amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D SAMIE_1030460 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D SAMIE_1030290 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D SAMIE_1032600 NAD(P)-dependent oxidoreductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SAMIE_1015920 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1028310 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:sami00627]
D SAMIE_1005050 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D SAMIE_1030320 salicylaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D SAMIE_1030400 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SAMIE_1030390 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D SAMIE_1030380 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D SAMIE_1030480 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D SAMIE_1005650 aminomethyl transferase family protein K15064 desA; syringate O-demethylase [EC:2.1.1.-]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:sami00364]
D SAMIE_1029120 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1031780 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1033760 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1034290 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_4000330 hqdD; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:sami00625]
D SAMIE_1005120 alpha/beta hydrolase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D SAMIE_1011120 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_3001470 alcohol dehydrogenase Adh K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_1000380 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_2000240 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_1019030 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_1034750 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMIE_4000320 hqdC; 4-hydroxymuconic semialdehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sami00361]
D SAMIE_1005120 alpha/beta hydrolase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D SAMIE_1029120 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1031780 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1033760 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1034290 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_4000330 hqdD; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D SAMIE_4000340 hqdE; intradiol 1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37]
C 00623 Toluene degradation [PATH:sami00623]
D SAMIE_1030320 salicylaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D SAMIE_1029120 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1031780 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1033760 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_1034290 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SAMIE_4000330 hqdD; maleylacetate reductase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:sami00622]
D SAMIE_1030320 salicylaldehyde dehydrogenase K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
C 00633 Nitrotoluene degradation [PATH:sami00633]
D SAMIE_1027860 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D SAMIE_1031510 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:sami00643]
D SAMIE_1033530 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D SAMIE_1030030 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D SAMIE_1029810 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D SAMIE_1030040 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D SAMIE_1025900 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SAMIE_1030250 fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SAMIE_1034560 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SAMIE_1005050 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:sami00930]
D SAMIE_1007250 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SAMIE_1016180 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SAMIE_1016210 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SAMIE_1002070 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SAMIE_1015990 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D SAMIE_1029570 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SAMIE_1006320 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:sami00626]
D SAMIE_1011120 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_3001470 alcohol dehydrogenase Adh K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SAMIE_1000380 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SAMIE_2000240 alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D SAMIE_1030400 protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D SAMIE_1030390 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:sami00984]
D SAMIE_1028620 flavin reductase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D SAMIE_1032770 KR domain-containing protein K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sami03020]
D SAMIE_1020620 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SAMIE_1020630 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SAMIE_1035410 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SAMIE_1000490 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sami03010]
D SAMIE_1013670 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SAMIE_1009510 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SAMIE_1025130 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SAMIE_1012360 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SAMIE_1025040 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SAMIE_1004290 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SAMIE_1025220 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SAMIE_1025070 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SAMIE_1002380 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SAMIE_1025190 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SAMIE_1035420 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SAMIE_1025230 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SAMIE_1035430 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SAMIE_1025080 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SAMIE_1022240 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SAMIE_1017720 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SAMIE_1025150 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SAMIE_1025180 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SAMIE_1025170 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SAMIE_1025090 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SAMIE_1025060 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SAMIE_1021280 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SAMIE_1004280 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SAMIE_1021270 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SAMIE_1017710 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SAMIE_1002370 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SAMIE_1025110 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SAMIE_1025000 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SAMIE_1025120 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SAMIE_1035400 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SAMIE_1025050 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SAMIE_1022200 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SAMIE_1028230 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SAMIE_1025140 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SAMIE_1025160 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SAMIE_1025100 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SAMIE_1006580 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SAMIE_1009620 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SAMIE_1RR0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMIE_1RR0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sami00970]
D SAMIE_1TR0230 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0450 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0480 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0280 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMIE_1TR0140 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMIE_1TR0150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMIE_1TR0540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SAMIE_1TR0340 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SAMIE_1TR0310 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMIE_1TR0350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMIE_1TR0520 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMIE_1TR0270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMIE_1TR0410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMIE_1TR0530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMIE_1TR0070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMIE_1TR0260 tRNA-His K14226 tRNA-His; tRNA His
D SAMIE_1TR0440 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMIE_1TR0470 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMIE_1TR0220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMIE_1TR0090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMIE_1TR0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMIE_1TR0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0120 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0460 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0490 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0400 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SAMIE_1TR0130 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMIE_1TR0210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMIE_1TR0380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMIE_1TR0360 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0430 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0500 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMIE_1TR0180 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMIE_1TR0300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMIE_1TR0320 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SAMIE_1TR0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SAMIE_1TR0160 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMIE_1TR0010 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMIE_1TR0190 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMIE_1013350 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1028180 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1014580 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SAMIE_1014560 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SAMIE_1013710 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SAMIE_1033300 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMIE_1006650 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SAMIE_1006660 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SAMIE_1036050 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SAMIE_1016690 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SAMIE_1002120 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SAMIE_1013070 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SAMIE_1018200 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SAMIE_1018530 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SAMIE_1029210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMIE_1005720 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SAMIE_1034520 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D SAMIE_1020160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMIE_1012760 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SAMIE_1029340 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SAMIE_1028260 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SAMIE_1028270 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SAMIE_1015050 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMIE_1000060 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sami03060]
D SAMIE_1024990 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SAMIE_1005450 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SAMIE_1025410 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SAMIE_1025400 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SAMIE_1025420 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SAMIE_1035470 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMIE_1012990 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMIE_1000080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SAMIE_1022250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SAMIE_1022330 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SAMIE_1020110 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D SAMIE_1020100 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D SAMIE_1007840 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMIE_1033160 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMIE_1005730 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sami04122]
D SAMIE_1013870 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1013880 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1024730 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SAMIE_1027740 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SAMIE_1005870 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SAMIE_1015140 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SAMIE_1036080 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SAMIE_1010640 thiamine biosynthesis protein ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D SAMIE_1013310 cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SAMIE_1007560 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sami03018]
D SAMIE_1007370 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SAMIE_1035530 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D SAMIE_1014830 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMIE_1005560 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SAMIE_1008030 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SAMIE_1012600 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SAMIE_1017730 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SAMIE_1035850 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMIE_1029150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SAMIE_1013960 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SAMIE_1020790 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SAMIE_1003840 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1023420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_2000420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1013130 RNA chaperone Hfq K03666 hfq; host factor-I protein
D SAMIE_1021800 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SAMIE_1012470 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sami03030]
D SAMIE_1015250 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1028850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1030680 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1007540 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMIE_1013840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMIE_1013060 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMIE_1029190 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMIE_1002310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SAMIE_1034450 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMIE_1010380 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SAMIE_1014950 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SAMIE_1001690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1027900 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_2001260 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3000310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3001240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1020200 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SAMIE_1019660 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SAMIE_1002130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMIE_1003820 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sami03410]
D SAMIE_1013600 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SAMIE_1000510 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMIE_1031950 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SAMIE_1036140 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SAMIE_1001000 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SAMIE_1029280 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SAMIE_1007580 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMIE_1033080 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMIE_1004610 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SAMIE_1017920 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SAMIE_1028680 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SAMIE_1002130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMIE_1033450 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMIE_1003820 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sami03420]
D SAMIE_1015090 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SAMIE_1016370 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SAMIE_1027620 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SAMIE_1010160 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SAMIE_1013620 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SAMIE_1002130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMIE_1003820 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sami03430]
D SAMIE_1028640 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SAMIE_1012260 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SAMIE_1013620 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SAMIE_1028410 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SAMIE_1033450 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMIE_1001690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1027900 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_2001260 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3000310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3001240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1007540 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMIE_1034450 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMIE_1013840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMIE_1029190 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMIE_1013060 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMIE_1015250 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1028850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1030680 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1002310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SAMIE_1003820 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:sami03440]
D SAMIE_1033450 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMIE_1001690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1027900 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_2001260 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3000310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3001240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1034320 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SAMIE_1010170 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SAMIE_1018190 recombination protein RecR K06187 recR; recombination protein RecR
D SAMIE_1033410 recombinase RecA K03553 recA; recombination protein RecA
D SAMIE_1002130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMIE_1027660 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SAMIE_1027650 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SAMIE_1020880 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SAMIE_1015080 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SAMIE_1007540 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMIE_1034450 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMIE_1013840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMIE_1029190 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMIE_1013060 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMIE_1015250 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1028850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1030680 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1002310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SAMIE_1018250 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:sami03450]
D SAMIE_1029730 Ku protein K10979 ku; DNA end-binding protein Ku
D SAMIE_1004600 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D SAMIE_1029740 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:sami03250]
D SAMIE_1000020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SAMIE_1034260 peptidylprolyl isomeras K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sami02010]
D SAMIE_1016900 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SAMIE_1007090 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SAMIE_1007120 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D SAMIE_1007110 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D SAMIE_1007100 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D SAMIE_1001310 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SAMIE_1029040 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SAMIE_1001340 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SAMIE_1029020 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SAMIE_1001320 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SAMIE_1029030 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SAMIE_1018100 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SAMIE_1018110 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SAMIE_1018120 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D SAMIE_1018130 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SAMIE_1008680 lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D SAMIE_1008690 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein
D SAMIE_1008760 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D SAMIE_1007510 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D SAMIE_1007520 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SAMIE_1007420 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D SAMIE_1017910 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B
D SAMIE_1017900 heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SAMIE_1019730 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D SAMIE_1019720 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D SAMIE_1000720 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SAMIE_1001400 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SAMIE_1011770 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SAMIE_1032990 cell division protein K09811 ftsX; cell division transport system permease protein
D SAMIE_1032980 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SAMIE_1031290 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D SAMIE_1017460 hypothetical protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D SAMIE_1032390 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SAMIE_1011450 ABC transporter K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SAMIE_1011440 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:sami02060]
D SAMIE_1022120 PTS fructose transporter subunit II K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SAMIE_1021900 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SAMIE_1028870 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:sami03070]
D SAMIE_1011230 channel protein TolC K12340 tolC; outer membrane protein
D SAMIE_1018560 membrane protein K12340 tolC; outer membrane protein
D SAMIE_1025410 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SAMIE_1025400 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SAMIE_1005450 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SAMIE_1024990 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SAMIE_1025420 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SAMIE_1035470 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMIE_1012990 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMIE_1022330 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SAMIE_1000080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SAMIE_1022250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SAMIE_1020110 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D SAMIE_1020100 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D SAMIE_1006890 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_1009220 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_1031060 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_1035260 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_4000020 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_5000040 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sami02020]
D SAMIE_1018090 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SAMIE_1018150 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SAMIE_1012290 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SAMIE_1018100 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SAMIE_1020540 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1034350 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_3001610 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1024230 flagellin K02406 fliC; flagellin
D SAMIE_1024260 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SAMIE_1024320 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SAMIE_1024440 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SAMIE_1006550 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SAMIE_1006560 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SAMIE_1006520 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D SAMIE_1006530 K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D SAMIE_1006540 potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D SAMIE_1007140 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SAMIE_1007130 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D SAMIE_1002360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D SAMIE_1023310 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D SAMIE_1000010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SAMIE_1006460 bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMIE_3001700 bifunctional lysylphosphatidylglycerol flippase/synthetase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMIE_1022150 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D SAMIE_1022160 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D SAMIE_1029600 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SAMIE_1033920 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR
D SAMIE_1003450 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D SAMIE_1003440 secretion system protein K02280 cpaC; pilus assembly protein CpaC
D SAMIE_1003420 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D SAMIE_1018370 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SAMIE_1003410 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D SAMIE_1003400 type II secretion system F family protein K12511 tadC; tight adherence protein C
D SAMIE_1007310 hypothetical protein K27080 tadG; tight adherence protein G
D SAMIE_1028650 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D SAMIE_1013390 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1
D SAMIE_1013170 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SAMIE_1013160 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SAMIE_1002710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1013400 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1013150 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D SAMIE_1013140 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1009360 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D SAMIE_1000710 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D SAMIE_1005380 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SAMIE_1022390 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SAMIE_1015010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1020850 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1027560 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1033320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1022420 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SAMIE_1022430 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SAMIE_1022410 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SAMIE_1022400 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SAMIE_1006400 phytochrome K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D SAMIE_1032850 chemotaxis protein CheY K11443 divK; two-component system, cell cycle response regulator DivK
D SAMIE_1033390 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D SAMIE_1013410 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT
D SAMIE_1010270 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D SAMIE_1009370 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D SAMIE_1011080 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_1023150 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_3001170 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_1005080 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_1011090 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_1023160 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_3000940 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_3001180 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_1024220 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D SAMIE_1003880 enoyl-CoA hydratase K13816 rpfF; DSF synthase
D SAMIE_1013690 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SAMIE_1006030 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D SAMIE_1006020 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D SAMIE_1023920 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D SAMIE_1023910 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SAMIE_1023900 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D SAMIE_1019240 cytochrome c family protein K08738 CYC; cytochrome c
D SAMIE_1021660 cytochrome c family protein K08738 CYC; cytochrome c
D SAMIE_1023180 cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SAMIE_3001300 cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SAMIE_1023190 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D SAMIE_3001290 cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D SAMIE_1023200 cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D SAMIE_3001280 cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D SAMIE_1011430 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SAMIE_1011420 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SAMIE_1011230 channel protein TolC K12340 tolC; outer membrane protein
D SAMIE_1018560 membrane protein K12340 tolC; outer membrane protein
D SAMIE_1008750 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1009870 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1014240 polysaccharide transporter K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1032030 polysaccharide biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1028590 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SAMIE_1014260 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SAMIE_1014250 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SAMIE_1033980 glycoside hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D SAMIE_1001540 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor
D SAMIE_1005150 DUF4974 domain-containing protein K07165 fecR; transmembrane sensor
D SAMIE_1008940 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor
D SAMIE_1013520 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor
D SAMIE_1014530 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor
D SAMIE_1034860 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor
D SAMIE_1018480 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:sami04148]
D SAMIE_1007660 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SAMIE_1023920 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sami02024]
D SAMIE_1013130 RNA chaperone Hfq K03666 hfq; host factor-I protein
D SAMIE_1005420 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SAMIE_1013280 type 1 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SAMIE_1035940 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SAMIE_1006560 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SAMIE_1006910 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1009240 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1031080 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1035280 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1006920 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SAMIE_1031090 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SAMIE_1035290 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SAMIE_1006930 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1009250 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1031100 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1035300 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1006940 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1009260 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1031110 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1035310 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1006960 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1009270 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1031120 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1035320 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1006970 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1009280 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1031130 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1035330 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1006980 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1009290 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1031140 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1035340 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1006990 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1009300 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1031150 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1035350 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1003880 enoyl-CoA hydratase K13816 rpfF; DSF synthase
D SAMIE_1016820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1027640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031370 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031480 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1005760 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SAMIE_1028670 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SAMIE_1027840 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SAMIE_1001460 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1004840 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1008100 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1011790 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1029950 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1021300 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SAMIE_1035470 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMIE_1005450 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SAMIE_1024990 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SAMIE_1025420 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SAMIE_1012990 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMIE_1022330 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SAMIE_1000080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SAMIE_1022250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:sami02030]
D SAMIE_1015010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1020850 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1027560 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1033320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1022430 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SAMIE_1022420 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SAMIE_1022410 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SAMIE_1022400 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SAMIE_1005380 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SAMIE_1022390 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SAMIE_1024190 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SAMIE_1024130 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SAMIE_1024120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SAMIE_1024320 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SAMIE_1024440 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SAMIE_1024450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:sami02040]
D SAMIE_1024210 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SAMIE_5000090 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SAMIE_5000230 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SAMIE_1024200 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D SAMIE_1024190 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SAMIE_1024180 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH
D SAMIE_1024170 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SAMIE_1024150 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SAMIE_1024140 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D SAMIE_1024130 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SAMIE_1024120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SAMIE_1024110 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SAMIE_1024100 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SAMIE_1024270 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SAMIE_1024090 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SAMIE_1024300 flagellar protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SAMIE_1024330 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SAMIE_1024340 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SAMIE_1024350 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SAMIE_1024360 flagellar biosynthesis protein FlgG K02390 flgE; flagellar hook protein FlgE
D SAMIE_1024370 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SAMIE_1024380 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SAMIE_1024390 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SAMIE_1024400 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SAMIE_1024410 flagellar biosynthesis protein FlgI K02395 flgJ; peptidoglycan hydrolase FlgJ
D SAMIE_1024420 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SAMIE_1024430 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D SAMIE_1024230 flagellin K02406 fliC; flagellin
D SAMIE_1024070 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2
D SAMIE_1024060 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SAMIE_1024320 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SAMIE_1024440 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SAMIE_1024450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SAMIE_1014960 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SAMIE_1000710 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D SAMIE_1024220 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D SAMIE_1024260 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SAMIE_1014830 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:sami04980]
D SAMIE_1000930 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SAMIE_1012650 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SAMIE_1021250 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SAMIE_1021260 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sami01501]
D SAMIE_1008170 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SAMIE_1020140 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SAMIE_1021040 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D SAMIE_1021050 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SAMIE_1000520 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1002150 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1013850 SGM family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1008080 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1020310 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1029970 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1008090 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SAMIE_1020300 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D SAMIE_1029960 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump
D SAMIE_1001460 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1004840 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1008100 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1011790 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1029950 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1011230 channel protein TolC K12340 tolC; outer membrane protein
D SAMIE_1018560 membrane protein K12340 tolC; outer membrane protein
D SAMIE_1005830 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1029170 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1035550 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1012220 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SAMIE_1020030 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SAMIE_1033330 subclass B3 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:sami01502]
D SAMIE_1019940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMIE_1012690 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMIE_1020010 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SAMIE_1020000 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SAMIE_1019970 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sami01503]
D SAMIE_1035540 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMIE_1020540 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1034350 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_3001610 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1000020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SAMIE_1034260 peptidylprolyl isomeras K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SAMIE_1008080 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1020310 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1029970 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1008090 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SAMIE_1020300 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D SAMIE_1029960 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump
D SAMIE_1011230 channel protein TolC K12340 tolC; outer membrane protein
D SAMIE_1018560 membrane protein K12340 tolC; outer membrane protein
D SAMIE_1006460 bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMIE_3001700 bifunctional lysylphosphatidylglycerol flippase/synthetase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sami01000]
C 01001 Protein kinases [BR:sami01001]
D SAMIE_1014390 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SAMIE_1030950 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SAMIE_2001140 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SAMIE_1032060 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SAMIE_1014230 protein tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SAMIE_1009890 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SAMIE_1018090 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SAMIE_1006550 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SAMIE_1007140 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SAMIE_1022150 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D SAMIE_1011610 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SAMIE_1033930 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SAMIE_1013170 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SAMIE_1013150 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D SAMIE_1022430 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SAMIE_1006400 phytochrome K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D SAMIE_1033390 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D SAMIE_1011080 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_1023150 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_3001170 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_1006030 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D SAMIE_1003900 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D SAMIE_1005570 DUF4118 domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D SAMIE_1034240 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sami01009]
D SAMIE_1012880 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SAMIE_1014620 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:sami01002]
D SAMIE_1005730 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SAMIE_1003460 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SAMIE_1002730 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1003700 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1035180 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1035370 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMIE_1007410 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SAMIE_1025880 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SAMIE_1009460 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SAMIE_1008970 asparagine synthetase B family protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SAMIE_1009960 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SAMIE_1004800 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D SAMIE_1025560 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D SAMIE_1007250 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SAMIE_1016180 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SAMIE_1016210 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SAMIE_1025270 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB
D SAMIE_1029060 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SAMIE_1012830 peptidase M2 family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D SAMIE_1026270 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SAMIE_1008040 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D SAMIE_1028490 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D SAMIE_1002300 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMIE_1016730 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMIE_1023030 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMIE_1006390 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SAMIE_1007350 hypothetical protein K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D SAMIE_1000130 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SAMIE_1014170 M23 family peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SAMIE_1013380 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SAMIE_1031650 aminopeptidase P family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D SAMIE_1026390 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SAMIE_1031330 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SAMIE_1013260 peptidase M28 family protein K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D SAMIE_1002200 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SAMIE_1027930 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SAMIE_1009580 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SAMIE_1021040 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D SAMIE_1013420 peptidase K20110 JAMM1; desampylase [EC:3.4.19.15]
D SAMIE_1020540 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1034350 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_3001610 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1035390 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D SAMIE_1012790 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SAMIE_1031320 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D SAMIE_1013040 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMIE_1013480 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SAMIE_1013820 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SAMIE_1031230 BREX system Lon protease-like protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SAMIE_1013330 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SAMIE_1007840 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMIE_1033160 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMIE_1026360 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SAMIE_1034480 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SAMIE_1025790 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SAMIE_1005660 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D SAMIE_1000150 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SAMIE_1003160 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D SAMIE_1012780 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SAMIE_1017230 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1017250 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1026100 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMIE_1031970 TldD/PmbA family protein K03592 pmbA; PmbA protein
D SAMIE_1000680 metalloprotease TldD K03568 tldD; TldD protein
D SAMIE_1008450 TldD/PmbA family protein K03568 tldD; TldD protein
D SAMIE_1020530 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D SAMIE_1020520 FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:sami01003]
D SAMIE_1016840 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D SAMIE_1012570 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D SAMIE_1025530 glycosyltransferase, exosortase A system-associated K16150 K16150; glycogen synthase [EC:2.4.1.11]
D SAMIE_1014470 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D SAMIE_1013450 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMIE_1005830 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1029170 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1035550 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1023310 glycoside hydrolase family 68 protein K00692 sacB; levansucrase [EC:2.4.1.10]
D SAMIE_1024250 glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D SAMIE_1011040 cellobiose phosphorylase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D SAMIE_1012420 alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sami01005]
D SAMIE_1008240 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SAMIE_1026490 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SAMIE_1000580 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SAMIE_1000570 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SAMIE_1008840 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SAMIE_1018350 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sami01011]
D SAMIE_1000970 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMIE_1019950 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SAMIE_1019960 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SAMIE_1019990 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SAMIE_1020020 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SAMIE_1019940 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMIE_1012690 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMIE_1007760 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SAMIE_1000150 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SAMIE_1020000 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SAMIE_1019970 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SAMIE_1025860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMIE_1000070 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SAMIE_1005830 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1029170 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1035550 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMIE_1012220 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SAMIE_1020030 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SAMIE_1013040 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMIE_1013450 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMIE_1025270 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB
D SAMIE_1014170 M23 family peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SAMIE_1007570 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SAMIE_1033350 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SAMIE_1000100 hypothetical protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D SAMIE_1013020 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D SAMIE_1004400 endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SAMIE_1013030 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SAMIE_1013810 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SAMIE_1035540 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMIE_1018170 hypothetical protein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:sami01004]
D SAMIE_1004360 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SAMIE_1027400 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SAMIE_1004390 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SAMIE_1004370 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1004500 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1017100 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1018970 KR domain-containing protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1031520 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMIE_1009610 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SAMIE_1001360 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_1035790 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_3001030 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMIE_1022010 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SAMIE_1030490 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SAMIE_1007890 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D SAMIE_1029400 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D SAMIE_1026420 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMIE_1030340 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D SAMIE_1016820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1027640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031370 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031480 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1000210 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SAMIE_1027410 phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SAMIE_1007780 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SAMIE_1033010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:sami01008]
D SAMIE_1019560 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:sami01006]
D SAMIE_1009760 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SAMIE_1019770 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SAMIE_1009550 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SAMIE_1000640 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D SAMIE_1014630 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SAMIE_1031880 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SAMIE_1033220 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:sami01007]
D SAMIE_1034520 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D SAMIE_1013350 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1028180 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1000940 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SAMIE_1015050 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMIE_1000060 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SAMIE_1002120 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SAMIE_1020160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMIE_1013070 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SAMIE_1005720 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SAMIE_1018530 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SAMIE_1029210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMIE_1033300 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMIE_1029340 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SAMIE_1006650 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SAMIE_1006660 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SAMIE_1016690 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SAMIE_1012760 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SAMIE_1036050 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SAMIE_1013710 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SAMIE_1028260 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SAMIE_1028270 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SAMIE_1036010 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SAMIE_1022640 pyridoxal phosphate-dependent aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D SAMIE_1025720 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D SAMIE_1021910 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1021920 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1033040 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMIE_1007750 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SAMIE_1035220 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SAMIE_1019810 aminotransferase class V-fold PLP-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SAMIE_1026250 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SAMIE_1024050 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SAMIE_1035230 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SAMIE_1026290 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SAMIE_1000700 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SAMIE_1025950 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMIE_1035670 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sami00194]
D SAMIE_3001000 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SAMIE_1018320 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SAMIE_3001010 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SAMIE_1018310 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SAMIE_3000960 H(+)-transporting ATPase K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SAMIE_1018300 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SAMIE_3000970 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SAMIE_1018290 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SAMIE_1010130 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMIE_1010140 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMIE_3000980 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMIE_1010120 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMIE_3000990 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMIE_1010110 F0F1 ATP synthase assembly protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sami03000]
D SAMIE_1026410 AraC family transcriptional regulator K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D SAMIE_1030370 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D SAMIE_4000270 hqdR; putative AraC-type transcription regulator K07506 K07506; AraC family transcriptional regulator
D SAMIE_1018270 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SAMIE_1010230 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SAMIE_1010500 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SAMIE_1022980 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SAMIE_1026450 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SAMIE_1005880 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SAMIE_1017140 LysR family transcriptional regulator K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator
D SAMIE_1030430 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D SAMIE_1019260 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D SAMIE_1002570 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D SAMIE_1004060 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SAMIE_1028380 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SAMIE_1033870 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SAMIE_1034130 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SAMIE_1030530 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SAMIE_1035190 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SAMIE_1019650 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D SAMIE_1004520 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SAMIE_1004870 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SAMIE_1005240 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SAMIE_1011780 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SAMIE_1021530 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SAMIE_1018040 TetR/AcrR family transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D SAMIE_1029890 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D SAMIE_1012200 DUF1956 domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D SAMIE_1000450 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SAMIE_1004130 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SAMIE_1016290 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D SAMIE_1026770 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D SAMIE_1028510 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SAMIE_1018730 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SAMIE_3001070 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SAMIE_1007970 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SAMIE_1005760 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SAMIE_1030450 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D SAMIE_4000230 transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SAMIE_1000960 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SAMIE_1023170 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SAMIE_3001350 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D SAMIE_1000260 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SAMIE_2000840 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SAMIE_1011280 transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D SAMIE_1012620 XRE family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D SAMIE_1021120 XRE family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D SAMIE_1033460 XRE family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D SAMIE_1021050 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SAMIE_1013980 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SAMIE_1004140 trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SAMIE_1001580 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1006770 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1009120 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1010590 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1027080 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1029070 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1030800 DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1035020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2000020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2001590 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2001690 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_3000010 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1020250 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D SAMIE_1020970 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SAMIE_1028300 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D SAMIE_1028280 PspC domain-containing protein K03973 pspC; phage shock protein C
D SAMIE_1012870 hypothetical protein K07735 algH; putative transcriptional regulator
D SAMIE_1011050 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D SAMIE_1016670 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D SAMIE_1012390 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D SAMIE_1020060 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:sami03021]
D SAMIE_1035410 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SAMIE_1020620 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SAMIE_1020630 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SAMIE_1000490 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SAMIE_1014960 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SAMIE_1019500 RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SAMIE_3001130 RNA polymerase sigma factor K24073 cnrH; RNA polymerase sigma factor CnrH
D SAMIE_1013440 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D SAMIE_2001070 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D SAMIE_1000710 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D SAMIE_1024260 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SAMIE_1005490 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SAMIE_1027700 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SAMIE_1017700 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D SAMIE_2000460 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D SAMIE_1011050 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D SAMIE_1016670 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D SAMIE_1014890 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D SAMIE_1033340 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D SAMIE_1029150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:sami03019]
D SAMIE_1026460 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D SAMIE_1035530 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D SAMIE_1007830 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SAMIE_1013960 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SAMIE_1012600 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SAMIE_1008030 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SAMIE_1017730 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SAMIE_1035850 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMIE_1014830 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMIE_1005560 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SAMIE_1029150 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SAMIE_1020790 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SAMIE_1003840 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1023420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_2000420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1013130 RNA chaperone Hfq K03666 hfq; host factor-I protein
D SAMIE_1021800 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SAMIE_1012470 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SAMIE_1007370 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SAMIE_1022130 RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D SAMIE_1019800 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:sami03011]
D SAMIE_1013670 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SAMIE_1009510 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SAMIE_1025130 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SAMIE_1012360 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SAMIE_1025040 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SAMIE_1004290 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SAMIE_1025220 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SAMIE_1025070 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SAMIE_1002380 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SAMIE_1025190 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SAMIE_1035420 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SAMIE_1025230 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SAMIE_1035430 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SAMIE_1025080 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SAMIE_1022240 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SAMIE_1017720 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SAMIE_1025150 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SAMIE_1025180 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SAMIE_1025170 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SAMIE_1025090 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SAMIE_1025060 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SAMIE_1004280 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SAMIE_1021270 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SAMIE_1017710 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SAMIE_1021280 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SAMIE_1002370 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SAMIE_1025110 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SAMIE_1025000 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SAMIE_1025120 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SAMIE_1035400 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SAMIE_1025050 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SAMIE_1022200 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SAMIE_1028230 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SAMIE_1025140 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SAMIE_1025160 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SAMIE_1025100 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SAMIE_1009620 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SAMIE_1006580 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SAMIE_1RR0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMIE_1RR0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sami03009]
D SAMIE_1007830 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SAMIE_1026460 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D SAMIE_1007820 GTPase Era K03595 era; GTPase
D SAMIE_1017810 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D SAMIE_1011050 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
D SAMIE_1016670 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D SAMIE_1005490 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SAMIE_1027700 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SAMIE_1017700 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D SAMIE_1002260 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6)) -dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SAMIE_1002230 RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SAMIE_1027950 methyltransferase domain-containing protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SAMIE_1008140 6S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SAMIE_1031870 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SAMIE_1029090 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SAMIE_1020050 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SAMIE_1021420 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SAMIE_1020320 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SAMIE_1001020 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SAMIE_1025370 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SAMIE_1025770 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SAMIE_1033270 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SAMIE_1017290 rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D SAMIE_1034430 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SAMIE_1007650 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SAMIE_1010050 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SAMIE_1008150 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SAMIE_1024850 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SAMIE_1013430 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SAMIE_1002250 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D SAMIE_1007990 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SAMIE_1022230 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D SAMIE_1016710 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D SAMIE_1020860 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SAMIE_1035530 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D SAMIE_1014600 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SAMIE_1017730 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SAMIE_1018470 ribosome biogenesis GTPase Der K03977 engA; GTPase
D SAMIE_1013120 GTPase HflX K03665 hflX; GTPase
D SAMIE_1016800 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SAMIE_1021140 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SAMIE_1005520 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D SAMIE_1005480 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D SAMIE_1025760 ribosome silencing factor K09710 ybeB; ribosome-associated protein
D SAMIE_1007930 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D SAMIE_1028860 ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D SAMIE_1012310 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:sami03016]
D SAMIE_1021320 ribonuclease T K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D SAMIE_1013350 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1028180 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1012760 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SAMIE_1005720 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SAMIE_1029210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMIE_1013070 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SAMIE_1020160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMIE_1033300 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMIE_1013710 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SAMIE_1036050 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SAMIE_1016690 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SAMIE_1002120 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SAMIE_1018530 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SAMIE_1029340 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SAMIE_1028260 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SAMIE_1028270 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SAMIE_1015050 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMIE_1000060 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SAMIE_1022560 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SAMIE_1003030 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SAMIE_1018210 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SAMIE_1005550 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SAMIE_1013870 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1013880 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1016800 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SAMIE_1014630 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SAMIE_1029110 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SAMIE_1029100 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SAMIE_1024490 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SAMIE_1035480 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SAMIE_1021000 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SAMIE_1033290 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D SAMIE_1034190 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D SAMIE_1003320 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D SAMIE_1035440 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D SAMIE_1034520 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D SAMIE_1006650 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SAMIE_1006660 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SAMIE_1000940 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SAMIE_1021200 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SAMIE_1013180 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SAMIE_1007950 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SAMIE_1022320 RNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2)) -methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D SAMIE_1012380 rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D SAMIE_1014740 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SAMIE_1022210 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SAMIE_1023930 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SAMIE_1022100 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D SAMIE_1010050 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SAMIE_1027740 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SAMIE_1025990 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D SAMIE_1024900 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D SAMIE_1009790 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SAMIE_1024010 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SAMIE_1024000 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SAMIE_1024710 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SAMIE_1028070 tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SAMIE_1003890 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SAMIE_1002190 tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SAMIE_1008000 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SAMIE_1028130 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SAMIE_1012900 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SAMIE_1012600 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SAMIE_1005560 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SAMIE_1022220 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:sami03012]
D SAMIE_1005510 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SAMIE_1036040 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SAMIE_1002110 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SAMIE_1009520 elongation factor Ts K02357 tsf; elongation factor Ts
D SAMIE_1025200 elongation factor Tu K02358 tuf; elongation factor Tu
D SAMIE_1025210 elongation factor G K02355 fusA; elongation factor G
D SAMIE_1029350 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SAMIE_1009540 ribosome recycling factor K02838 frr; ribosome recycling factor
D SAMIE_1029360 peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SAMIE_1006590 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SAMIE_1014160 elongation factor P K02356 efp; elongation factor P
D SAMIE_1035570 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D SAMIE_1026150 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D SAMIE_1010040 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:sami03110]
D SAMIE_1016870 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D SAMIE_1028480 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SAMIE_1013470 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SAMIE_1012770 ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SAMIE_1020790 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SAMIE_1003840 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1023420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_2000420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1020780 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SAMIE_1024030 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D SAMIE_1020960 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SAMIE_1011070 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D SAMIE_2001030 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D SAMIE_1007500 heat-shock protein K04080 ibpA; molecular chaperone IbpA
D SAMIE_2001040 heat-shock protein K04080 ibpA; molecular chaperone IbpA
D SAMIE_2000430 co-chaperone GroES K04078 groES; chaperonin GroES
D SAMIE_1020540 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1034350 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_3001610 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMIE_1002200 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SAMIE_1010120 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMIE_3000990 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMIE_1000080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SAMIE_1020800 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D SAMIE_1000020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SAMIE_1034260 peptidylprolyl isomeras K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SAMIE_1005430 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SAMIE_1033130 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SAMIE_1002280 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SAMIE_1012950 thioredoxin TrxA K03671 TXN; thioredoxin
D SAMIE_1011500 thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D SAMIE_1021620 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D SAMIE_1021060 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D SAMIE_1001970 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_1012100 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_2000720 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_3000750 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_1007450 alkyl hydroperoxide reductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D SAMIE_1011410 redoxin K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:sami04131]
D SAMIE_1019550 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SAMIE_1026460 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D SAMIE_1025840 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SAMIE_1032870 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SAMIE_1008580 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMIE_1008560 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SAMIE_1005670 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMIE_1020920 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:sami03032]
D SAMIE_1020200 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SAMIE_2001130 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SAMIE_1000010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SAMIE_1010380 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SAMIE_1014950 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SAMIE_1001690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1027900 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_2001260 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3000310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3001240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1007540 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMIE_1034450 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMIE_1002310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SAMIE_1029190 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMIE_1013060 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMIE_1015250 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1028850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1030680 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1013840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMIE_1019660 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SAMIE_1002130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMIE_1003820 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SAMIE_1008270 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SAMIE_1029290 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SAMIE_1012450 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SAMIE_1014300 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SAMIE_1007810 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SAMIE_1025570 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sami03036]
D SAMIE_1007830 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SAMIE_1008580 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMIE_1001150 methylase K26273 SBNO; protein strawberry notch
D SAMIE_1027240 methylase K26273 SBNO; protein strawberry notch
D SAMIE_1001060 methylase K26273 SBNO; protein strawberry notch
D SAMIE_2001700 methylase K26273 SBNO; protein strawberry notch
D SAMIE_1030850 methylase K26273 SBNO; protein strawberry notch
D SAMIE_1027160 methylase K26273 SBNO; protein strawberry notch
D SAMIE_3001710 methylase K26273 SBNO; protein strawberry notch
D SAMIE_3001780 methylase K26273 SBNO; protein strawberry notch
D SAMIE_2001780 methylase K26273 SBNO; protein strawberry notch
D SAMIE_2001130 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SAMIE_1000010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SAMIE_1024650 heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D SAMIE_1011400 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D SAMIE_1032880 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D SAMIE_2001370 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D SAMIE_1013130 RNA chaperone Hfq K03666 hfq; host factor-I protein
D SAMIE_1000450 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SAMIE_1004130 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SAMIE_1031910 chromosome segregation protein K03529 smc; chromosome segregation protein
D SAMIE_1020130 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D SAMIE_1020120 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D SAMIE_1019920 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SAMIE_1032980 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SAMIE_1020030 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SAMIE_1028700 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SAMIE_1019930 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D SAMIE_1019980 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SAMIE_1032990 cell division protein K09811 ftsX; cell division transport system permease protein
D SAMIE_1019910 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SAMIE_1008540 cell division protein ZapA K09888 zapA; cell division protein ZapA
D SAMIE_1003560 cell division protein ZapE K06916 zapE; cell division protein ZapE
D SAMIE_1011380 cell division protein ZapE K06916 zapE; cell division protein ZapE
D SAMIE_1035540 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMIE_1008080 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1020310 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1029970 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1012250 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SAMIE_1012240 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SAMIE_1012230 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SAMIE_1012210 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D SAMIE_1000230 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_1010520 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_1028770 ATPase K03496 parA; chromosome partitioning protein
D SAMIE_1029080 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_1030990 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D SAMIE_2000010 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D SAMIE_2000310 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_3001560 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_4000510 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_5000010 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_6000010 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_1001580 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1006770 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1009120 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1010590 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1027080 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1029070 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1030800 DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1035020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2000020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2001590 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2001690 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_3000010 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1012450 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SAMIE_1014300 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SAMIE_1029100 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SAMIE_1029090 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SAMIE_1014740 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SAMIE_1001090 integrase K03733 xerC; integrase/recombinase XerC
D SAMIE_1027210 integrase K03733 xerC; integrase/recombinase XerC
D SAMIE_1030880 integrase K03733 xerC; integrase/recombinase XerC
D SAMIE_2001750 integrase K03733 xerC; integrase/recombinase XerC
D SAMIE_1021380 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D SAMIE_6000150 integrase K03733 xerC; integrase/recombinase XerC
D SAMIE_1000330 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_1001080 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_1001130 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_1009660 tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D SAMIE_1027190 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_1027220 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_1030870 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_2001440 transposase K04763 xerD; integrase/recombinase XerD
D SAMIE_2001720 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_2001760 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_3001720 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_3001760 integrase K04763 xerD; integrase/recombinase XerD
D SAMIE_1020510 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SAMIE_1035000 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SAMIE_1035460 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:sami03400]
D SAMIE_1007380 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SAMIE_1000510 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMIE_1031950 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SAMIE_1013600 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SAMIE_1009690 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SAMIE_1036090 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SAMIE_1018270 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SAMIE_1017740 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D SAMIE_1004560 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D SAMIE_1007580 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMIE_1033080 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMIE_1001000 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SAMIE_1029280 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SAMIE_1036140 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SAMIE_1004610 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SAMIE_1017920 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SAMIE_1028680 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SAMIE_1033450 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMIE_1003820 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SAMIE_1002130 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMIE_1016370 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SAMIE_1027620 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SAMIE_1010160 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SAMIE_1013620 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SAMIE_1020620 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SAMIE_1020630 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SAMIE_1035410 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SAMIE_1000490 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SAMIE_1015090 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SAMIE_1028640 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SAMIE_1012260 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SAMIE_1028410 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SAMIE_1007540 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMIE_1034450 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMIE_1002310 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SAMIE_1029190 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMIE_1013060 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMIE_1015250 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1028850 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1030680 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMIE_1013840 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMIE_1001690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1027900 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_2001260 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3000310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3001240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1033410 recombinase RecA K03553 recA; recombination protein RecA
D SAMIE_1027660 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SAMIE_1027650 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SAMIE_1020880 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SAMIE_1018250 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SAMIE_1017850 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SAMIE_1034320 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SAMIE_1015080 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SAMIE_1010170 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SAMIE_1018190 recombination protein RecR K06187 recR; recombination protein RecR
D SAMIE_1003810 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SAMIE_1012940 double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SAMIE_1031250 exodeoxyribonuclease V subunit beta K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SAMIE_1012930 double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SAMIE_1031240 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SAMIE_1022840 type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D SAMIE_1020550 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D SAMIE_1023750 peptidase C14 K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D SAMIE_1029730 Ku protein K10979 ku; DNA end-binding protein Ku
D SAMIE_1004600 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D SAMIE_1029740 DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D SAMIE_1008270 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SAMIE_1029290 DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SAMIE_1007810 type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SAMIE_1025570 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SAMIE_2001130 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SAMIE_1035850 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMIE_1028560 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SAMIE_1013330 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SAMIE_1004630 protein ImuA K14160 imuA; protein ImuA
D SAMIE_1008330 hypothetical protein K14160 imuA; protein ImuA
D SAMIE_3000530 hypothetical protein K14160 imuA; protein ImuA
D SAMIE_1004640 DNA polymerase Y family protein K14161 imuB; protein ImuB
D SAMIE_1008340 DNA polymerase Y family protein K14161 imuB; protein ImuB
D SAMIE_3000520 DNA polymerase Y family protein K14161 imuB; protein ImuB
D SAMIE_1004650 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D SAMIE_1008350 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D SAMIE_3000510 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D SAMIE_1000200 RecX family transcriptional regulator K03565 recX; regulatory protein
D SAMIE_1034500 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SAMIE_1029260 DNA ligase-associated DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D SAMIE_1027520 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SAMIE_1027500 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:sami03029]
D SAMIE_1023910 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SAMIE_1005510 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SAMIE_1036040 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SAMIE_1009520 elongation factor Ts K02357 tsf; elongation factor Ts
D SAMIE_1025200 elongation factor Tu K02358 tuf; elongation factor Tu
D SAMIE_1025210 elongation factor G K02355 fusA; elongation factor G
D SAMIE_1028530 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D SAMIE_1020230 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D SAMIE_1007820 GTPase Era K03595 era; GTPase
D SAMIE_1015050 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMIE_1029210 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMIE_1033300 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMIE_1020160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMIE_1014580 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SAMIE_1014560 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SAMIE_1001690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1027900 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_2001260 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3000310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_3001240 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMIE_1009590 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D SAMIE_1020790 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SAMIE_1020960 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SAMIE_1003840 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1023420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_2000420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_2000430 co-chaperone GroES K04078 groES; chaperonin GroES
D SAMIE_1020780 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SAMIE_1013870 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1013880 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1021060 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D SAMIE_1024800 methyltransferase K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D SAMIE_1020510 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SAMIE_1033220 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SAMIE_1033230 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D SAMIE_1002360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D SAMIE_1035470 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMIE_1006040 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D SAMIE_1033250 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D SAMIE_1028930 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sami02000]
D SAMIE_1031290 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D SAMIE_1025610 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SAMIE_1017460 hypothetical protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D SAMIE_1032390 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SAMIE_1011450 ABC transporter K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SAMIE_1011440 thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SAMIE_1003790 elongation factor 3 K15738 uup; ABC transport system ATP-binding/permease protein
D SAMIE_1016900 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SAMIE_1007090 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SAMIE_1007120 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D SAMIE_1007110 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D SAMIE_1007100 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D SAMIE_1001310 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SAMIE_1029040 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SAMIE_1001340 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SAMIE_1029020 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SAMIE_1001320 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SAMIE_1029030 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SAMIE_1001300 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D SAMIE_1029050 ABC transporter K18480 linN; cholesterol transport system auxiliary component
D SAMIE_1018100 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SAMIE_1018110 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SAMIE_1018120 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D SAMIE_1018130 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SAMIE_1021300 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SAMIE_1021460 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SAMIE_1021450 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D SAMIE_1021440 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SAMIE_1008690 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein
D SAMIE_1008680 lipopolysaccharide biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D SAMIE_1008760 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D SAMIE_1019730 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D SAMIE_1019720 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D SAMIE_1000720 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SAMIE_1001400 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SAMIE_1011770 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SAMIE_1012150 ABC transporter permease K25187 pltK; pyoluteorin transport system permease protein
D SAMIE_1012170 ABC transporter permease K25188 pltJ; pyoluteorin transport system permease protein
D SAMIE_1012180 ABC transporter ATP-binding protein K25189 pltI; pyoluteorin transport system ATP-binding protein
D SAMIE_1012190 membrane protein K25190 pltH; membrane fusion protein PltH
D SAMIE_1012140 RND transporter K25184 pltN; outer membrane protein PltN
D SAMIE_1007510 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D SAMIE_1007520 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SAMIE_1007420 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D SAMIE_1017910 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B
D SAMIE_1017900 heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SAMIE_1032990 cell division protein K09811 ftsX; cell division transport system permease protein
D SAMIE_1032980 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SAMIE_1001490 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMIE_1004210 sugar ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMIE_1011850 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMIE_1014270 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMIE_1028050 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMIE_1002180 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMIE_1004200 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMIE_1028060 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMIE_1004320 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SAMIE_1030510 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SAMIE_1004330 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SAMIE_1030500 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SAMIE_1026030 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SAMIE_1017640 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SAMIE_1004230 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D SAMIE_1018520 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D SAMIE_1004000 MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D SAMIE_1000760 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D SAMIE_1017130 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D SAMIE_1023830 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SAMIE_1004090 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D SAMIE_1034150 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D SAMIE_1025920 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D SAMIE_1030360 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D SAMIE_1008170 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SAMIE_1035380 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D SAMIE_1032800 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SAMIE_1013780 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D SAMIE_1021500 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SAMIE_1027020 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D SAMIE_1021900 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SAMIE_1022120 PTS fructose transporter subunit II K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SAMIE_1028870 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SAMIE_1016700 potassium transporter TrkA K10716 kch; voltage-gated potassium channel
D SAMIE_1000650 ammonium transporter K03320 amt; ammonium transporter, Amt family
D SAMIE_1001270 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1001510 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1003080 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1003340 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1003710 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1004920 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1013730 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1015840 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1019520 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1021100 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1026430 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1026790 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1027530 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1032950 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SAMIE_1022440 large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D SAMIE_1026170 magnesium transporter K06213 mgtE; magnesium transporter
D SAMIE_1024320 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SAMIE_1024440 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SAMIE_1024450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SAMIE_1025650 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D SAMIE_1025630 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D SAMIE_1025640 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D SAMIE_1036060 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D SAMIE_1028330 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D SAMIE_1028340 protein TolR K03560 tolR; biopolymer transport protein TolR
D SAMIE_1020430 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D SAMIE_3001200 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D SAMIE_1024860 fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D SAMIE_1035740 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D SAMIE_1021770 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SAMIE_1014290 porin family protein K16079 omp31; outer membrane immunogenic protein
D SAMIE_1016610 porin family protein K16079 omp31; outer membrane immunogenic protein
D SAMIE_1018010 opacity protein K16079 omp31; outer membrane immunogenic protein
D SAMIE_1034410 porin family protein K16079 omp31; outer membrane immunogenic protein
D SAMIE_1003300 flagellar motor protein MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SAMIE_1028740 long-chain fatty acid transporter K06076 fadL; long-chain fatty acid transport protein
D SAMIE_1016570 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D SAMIE_1017270 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D SAMIE_5000140 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D SAMIE_1021470 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D SAMIE_1026660 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D SAMIE_1001550 TonB-dependent receptor K16152 hasR; heme acquisition protein HasR
D SAMIE_1008620 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D SAMIE_1002790 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1002830 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1002910 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1003020 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1005310 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1005600 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1006380 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1007170 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1007260 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1008950 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1011560 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1014540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1015810 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1016000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1016170 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1016200 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1016270 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1017150 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1017240 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1018430 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1019180 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1019330 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1020730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1021590 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1022040 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1022190 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1022730 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1022890 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1022990 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1025930 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1026400 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1026840 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1026870 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1027000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1028440 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1028980 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1029470 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1029780 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1030070 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1030560 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1031660 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1032540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1033490 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1033570 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1033740 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1034000 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1034540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1034610 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1034670 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1034740 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1034870 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_2001060 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SAMIE_1011580 transporter K15725 czcC; outer membrane protein, heavy metal efflux system
D SAMIE_1018700 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D SAMIE_2000210 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D SAMIE_3000570 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D SAMIE_1011230 channel protein TolC K12340 tolC; outer membrane protein
D SAMIE_1018560 membrane protein K12340 tolC; outer membrane protein
D SAMIE_1017470 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D SAMIE_1001460 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1004840 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1008100 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1011790 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1029950 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1004350 RND transporter K18904 nodT; outer membrane protein, multidrug efflux system
D SAMIE_1008750 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1009870 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1014240 polysaccharide transporter K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1032030 polysaccharide biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D SAMIE_1009590 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D SAMIE_1018460 pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB
D SAMIE_1003800 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D SAMIE_1016640 hypothetical protein K07278 tamA; translocation and assembly module TamA
D SAMIE_1033440 hypothetical protein K07278 tamA; translocation and assembly module TamA
D SAMIE_1010080 exoprotein K09800 tamB; translocation and assembly module TamB
D SAMIE_1016630 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D SAMIE_1033430 DUF490 domain-containing protein K09800 tamB; translocation and assembly module TamB
D SAMIE_1034210 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D SAMIE_1034200 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D SAMIE_1002290 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D SAMIE_1029200 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D SAMIE_1007920 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein
D SAMIE_1023290 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D SAMIE_1030050 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D SAMIE_1002770 ethanolamine permease K16238 eat; ethanolamine permease
D SAMIE_1006270 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SAMIE_1011590 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D SAMIE_1018680 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D SAMIE_3000550 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D SAMIE_1008090 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SAMIE_1020300 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D SAMIE_1029960 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump
D SAMIE_1024880 EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D SAMIE_1030520 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D SAMIE_1011200 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D SAMIE_1000820 cation acetate symporter K14393 actP; cation/acetate symporter
D SAMIE_1009360 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D SAMIE_1005360 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D SAMIE_1004940 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D SAMIE_1023450 cation transporter K24160 NHA1; sodium/hydrogen antiporter
D SAMIE_1023460 cation transporter K24160 NHA1; sodium/hydrogen antiporter
D SAMIE_1005780 sodium:proton exchanger K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D SAMIE_1013680 sodium:proton exchanger K03455 KEA1_2_3; K+:H+ antiporter
D SAMIE_2001120 sodium:proton exchanger K03455 KEA1_2_3; K+:H+ antiporter
D SAMIE_1017750 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter
D SAMIE_1005580 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D SAMIE_1035200 benzoate transporter K05782 benE; benzoate membrane transport protein
D SAMIE_1028580 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SAMIE_1023850 chromate transporter K07240 chrA; chromate transporter
D SAMIE_3000610 chromate transporter K07240 chrA; chromate transporter
D SAMIE_1011340 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family
D SAMIE_1029540 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D SAMIE_2000860 arsenical-resistance protein K03325 ACR3; arsenite transporter
D SAMIE_1000070 murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SAMIE_1000780 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D SAMIE_1007480 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D SAMIE_1028240 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D SAMIE_1018230 membrane protein K09125 yhhQ; queuosine precursor transporter
D SAMIE_1021690 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D SAMIE_1003360 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D SAMIE_1011640 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D SAMIE_1021750 MarC family transcriptional regulator K05595 marC; multiple antibiotic resistance protein
D SAMIE_1019980 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SAMIE_1025840 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SAMIE_1032870 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SAMIE_1011550 energy transducer TonB K03832 tonB; periplasmic protein TonB
D SAMIE_1020450 energy transducer TonB K03832 tonB; periplasmic protein TonB
D SAMIE_1025660 energy transducer TonB K03832 tonB; periplasmic protein TonB
D SAMIE_1027780 energy transducer TonB K03832 tonB; periplasmic protein TonB
D SAMIE_5000120 energy transducer TonB K03832 tonB; periplasmic protein TonB
D SAMIE_1028370 peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D SAMIE_1015230 hypothetical protein K03646 tolA; colicin import membrane protein
D SAMIE_1028360 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D SAMIE_1026230 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D SAMIE_1021510 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D SAMIE_1032380 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D SAMIE_1011600 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D SAMIE_1018690 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D SAMIE_3000560 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D SAMIE_1017450 secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D SAMIE_1030610 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D SAMIE_1008080 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1020310 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1029970 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1032060 hypothetical protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SAMIE_1014230 protein tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SAMIE_1009890 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SAMIE_1009880 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator
D SAMIE_1027890 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D SAMIE_1020290 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D SAMIE_1007440 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D SAMIE_5000190 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D SAMIE_3001100 copper resistance protein CopD K07245 pcoD; copper resistance protein D
D SAMIE_3001110 copper resistance protein CopC K07156 copC; copper resistance protein C
D SAMIE_6000110 MipA/OmpV family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:sami02044]
D SAMIE_1011230 channel protein TolC K12340 tolC; outer membrane protein
D SAMIE_1018560 membrane protein K12340 tolC; outer membrane protein
D SAMIE_1032390 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SAMIE_1032380 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D SAMIE_1017460 hypothetical protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D SAMIE_1017450 secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D SAMIE_1017470 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D SAMIE_1009910 general secretion pathway protein K02450 gspA; general secretion pathway protein A
D SAMIE_1003460 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SAMIE_1003450 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D SAMIE_1003440 secretion system protein K02280 cpaC; pilus assembly protein CpaC
D SAMIE_1003430 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD
D SAMIE_1003420 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D SAMIE_1018370 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SAMIE_1003410 pilus assembly protein TadB K12510 tadB; tight adherence protein B
D SAMIE_1003400 type II secretion system F family protein K12511 tadC; tight adherence protein C
D SAMIE_1007310 hypothetical protein K27080 tadG; tight adherence protein G
D SAMIE_1013340 DUF4131 domain-containing protein K02238 comEC; competence protein ComEC
D SAMIE_1024270 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SAMIE_1024090 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SAMIE_1024200 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D SAMIE_1024180 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH
D SAMIE_1024170 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SAMIE_1024120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SAMIE_1024110 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SAMIE_1024100 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SAMIE_1006890 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_1009220 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_1031060 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_1035260 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_4000020 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_5000040 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SAMIE_1001850 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D SAMIE_1011910 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D SAMIE_2000590 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D SAMIE_3000630 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D SAMIE_1001870 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D SAMIE_1011940 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D SAMIE_2000610 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D SAMIE_3000650 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D SAMIE_1001880 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D SAMIE_1011970 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D SAMIE_2000630 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D SAMIE_3000660 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D SAMIE_1001890 type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D SAMIE_2000640 type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D SAMIE_3000670 type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D SAMIE_1011960 conjugal transfer protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D SAMIE_1001900 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU
D SAMIE_1011990 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU
D SAMIE_2000650 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU
D SAMIE_3000680 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU
D SAMIE_1001910 type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D SAMIE_1012000 conjugal transfer protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D SAMIE_2000660 type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D SAMIE_3000690 type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D SAMIE_1001920 conjugal transfer protein TraF K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D SAMIE_2000670 type VI secretion protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D SAMIE_3000700 type VI secretion protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D SAMIE_1001950 type IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D SAMIE_1012040 conjugal transfer protein K12063 traC; conjugal transfer ATP-binding protein TraC
D SAMIE_2000700 type IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D SAMIE_3000730 type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D SAMIE_1001960 conjugal transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D SAMIE_1012050 conjugal transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D SAMIE_2000710 conjugal transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D SAMIE_3000740 hypothetical protein K12064 traV; conjugal transfer pilus assembly protein TraV
D SAMIE_1001980 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D SAMIE_1012060 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D SAMIE_2000730 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D SAMIE_3000760 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D SAMIE_1001990 conjugal transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D SAMIE_1012070 hypothetical protein K12066 traK; conjugal transfer pilus assembly protein TraK
D SAMIE_2000740 conjugal transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D SAMIE_3000770 conjugal transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D SAMIE_1002000 conjugal transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D SAMIE_1012080 conjugal transfer protein K12067 traE; conjugal transfer pilus assembly protein TraE
D SAMIE_2000750 conjugal transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D SAMIE_3000780 conjugal transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D SAMIE_2000760 Type IV conjugative transfer system protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D SAMIE_1002010 hypothetical protein K12069 traA; conjugal transfer pilus assembly protein TraA
D SAMIE_3000790 hypothetical protein K12069 traA; conjugal transfer pilus assembly protein TraA
D SAMIE_1001970 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_1012100 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_2000720 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_3000750 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SAMIE_1001860 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D SAMIE_1011920 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D SAMIE_2000600 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D SAMIE_3000640 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D SAMIE_1006910 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1009240 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1031080 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1035280 P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SAMIE_1006920 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SAMIE_1031090 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SAMIE_1035290 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SAMIE_1006930 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1009250 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1031100 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1035300 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SAMIE_1006970 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1009280 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1031130 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1035330 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SAMIE_1006980 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1009290 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1031140 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1035340 P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SAMIE_1006990 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1009300 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1031150 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1035350 conjugal transfer protein TraI K20533 trbI; type IV secretion system protein TrbI
D SAMIE_1006940 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1009260 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1031110 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1035310 P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SAMIE_1006960 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1009270 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1031120 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1035320 P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SAMIE_1002640 hypothetical protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D SAMIE_1002650 hypothetical protein K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone
D SAMIE_1012990 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMIE_1000080 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D SAMIE_1025410 protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D SAMIE_1025400 protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D SAMIE_1005450 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SAMIE_1024990 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SAMIE_1022250 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SAMIE_1022330 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SAMIE_1025420 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SAMIE_1035470 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMIE_1020110 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D SAMIE_1020100 twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:sami02042]
D SAMIE_1021770 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:sami02022]
D SAMIE_1018090 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SAMIE_1018150 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SAMIE_1006550 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SAMIE_1006560 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SAMIE_1007140 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SAMIE_1007130 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D SAMIE_1022150 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D SAMIE_1022160 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D SAMIE_1011610 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SAMIE_1003760 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SAMIE_1005590 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SAMIE_1006500 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SAMIE_1020370 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SAMIE_1020410 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SAMIE_1029980 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SAMIE_1033900 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SAMIE_1033920 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR
D SAMIE_1033930 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SAMIE_1021170 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D SAMIE_1013170 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SAMIE_1013160 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SAMIE_1013150 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D SAMIE_1013140 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D SAMIE_1003950 PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator
D SAMIE_1022430 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SAMIE_1022410 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SAMIE_1022400 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SAMIE_1006400 phytochrome K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D SAMIE_1032850 chemotaxis protein CheY K11443 divK; two-component system, cell cycle response regulator DivK
D SAMIE_1033390 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D SAMIE_1010270 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D SAMIE_1009370 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D SAMIE_1011080 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_1023150 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_3001170 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SAMIE_1005080 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_1011090 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_1023160 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_3000940 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_3001180 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D SAMIE_1024220 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D SAMIE_1006030 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D SAMIE_1006020 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D SAMIE_1018480 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D SAMIE_1003900 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D SAMIE_1005570 DUF4118 domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D SAMIE_1034240 hybrid sensor histidine kinase/response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:sami02035]
D SAMIE_1022430 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SAMIE_1022420 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SAMIE_1005380 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SAMIE_1022390 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SAMIE_1022400 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SAMIE_1022410 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SAMIE_1015010 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1020850 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1027560 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1033320 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SAMIE_1024180 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH
D SAMIE_1024170 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SAMIE_1024110 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SAMIE_1024100 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SAMIE_1024270 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SAMIE_1024090 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SAMIE_1024190 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SAMIE_1024130 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SAMIE_1024120 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SAMIE_1024200 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D SAMIE_1024400 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SAMIE_1024300 flagellar protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SAMIE_1024390 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SAMIE_1024140 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D SAMIE_1024210 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SAMIE_5000090 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SAMIE_5000230 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SAMIE_1024150 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SAMIE_1024330 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SAMIE_1024340 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SAMIE_1024350 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SAMIE_1024370 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SAMIE_1024380 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SAMIE_1024410 flagellar biosynthesis protein FlgI K02395 flgJ; peptidoglycan hydrolase FlgJ
D SAMIE_1024360 flagellar biosynthesis protein FlgG K02390 flgE; flagellar hook protein FlgE
D SAMIE_1024420 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SAMIE_1024430 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D SAMIE_1024230 flagellin K02406 fliC; flagellin
D SAMIE_1024070 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2
D SAMIE_1024060 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D SAMIE_1024260 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SAMIE_1024320 flagellar motor protein K02556 motA; chemotaxis protein MotA
D SAMIE_1024440 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D SAMIE_1024450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D SAMIE_1024220 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D SAMIE_1003460 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SAMIE_1003450 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D SAMIE_1003440 secretion system protein K02280 cpaC; pilus assembly protein CpaC
D SAMIE_1003430 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD
D SAMIE_1003420 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D SAMIE_1018370 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sami04812]
D SAMIE_1012250 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SAMIE_1019910 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SAMIE_1019920 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SAMIE_1000230 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_1010520 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_1028770 ATPase K03496 parA; chromosome partitioning protein
D SAMIE_1029080 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_1030990 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D SAMIE_2000010 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D SAMIE_2000310 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_3001560 ParA family protein K03496 parA; chromosome partitioning protein
D SAMIE_4000510 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_5000010 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_6000010 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SAMIE_1001580 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1006770 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1009120 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1010590 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1027080 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1029070 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1030800 DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_1035020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2000020 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2001590 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_2001690 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMIE_3000010 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sami04147]
D SAMIE_1008580 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMIE_1014830 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMIE_1008560 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SAMIE_1008570 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SAMIE_1020920 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SAMIE_1000020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SAMIE_1034260 peptidylprolyl isomeras K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SAMIE_1006390 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SAMIE_1011490 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D SAMIE_1011510 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D SAMIE_1003840 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1023420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_2000420 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMIE_1020790 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SAMIE_1007850 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMIE_1012790 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SAMIE_1002070 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D SAMIE_1002220 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SAMIE_1025200 elongation factor Tu K02358 tuf; elongation factor Tu
D SAMIE_1026460 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D SAMIE_1022560 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SAMIE_1017640 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SAMIE_1016820 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1027640 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031370 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1031480 hypothetical protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMIE_1001410 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1005140 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1006330 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1011330 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012700 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1015900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1026860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029670 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1029860 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMIE_1012830 peptidase M2 family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D SAMIE_1012880 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SAMIE_1024980 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SAMIE_1023890 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SAMIE_1021570 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SAMIE_1033880 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SAMIE_1030040 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D SAMIE_1009400 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SAMIE_1014490 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SAMIE_1017070 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SAMIE_1002710 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1013400 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMIE_1006180 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SAMIE_1029920 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SAMIE_1035680 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SAMIE_1027990 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SAMIE_1003620 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1005070 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1007900 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMIE_1016430 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D SAMIE_1006250 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SAMIE_1005440 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SAMIE_1005670 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:sami02048]
D SAMIE_1022840 type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D SAMIE_1022790 CRISPR-associated endonuclease Cas3'' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D SAMIE_1022830 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D SAMIE_1022810 type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D SAMIE_1022820 type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D SAMIE_1022800 type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D SAMIE_1001770 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SAMIE_1001790 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SAMIE_1024500 hypothetical protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SAMIE_1001760 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SAMIE_1001750 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SAMIE_1024540 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SAMIE_1019630 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D SAMIE_1011000 restriction endonuclease K07448 mrr; restriction system protein
D SAMIE_1009140 toxin MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SAMIE_7000100 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SAMIE_1006700 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D SAMIE_1006710 AbrB family transcriptional regulator K19156 prlF; antitoxin PrlF
D SAMIE_6000190 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D SAMIE_6000200 type II toxin-antitoxin system antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D SAMIE_1030950 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SAMIE_2001140 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SAMIE_1028280 PspC domain-containing protein K03973 pspC; phage shock protein C
D SAMIE_1029800 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D SAMIE_5000310 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D SAMIE_2000270 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D SAMIE_6000140 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
D SAMIE_1027630 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1
D SAMIE_1022220 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D SAMIE_1010920 PIN domain-containing protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D SAMIE_1019910 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SAMIE_1012250 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D SAMIE_1012450 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SAMIE_1014300 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SAMIE_1013350 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1028180 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SAMIE_1013870 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMIE_1013880 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:sami04090]
D SAMIE_1012790 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SAMIE_1012830 peptidase M2 family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:sami01504]
D SAMIE_1013950 N-acetyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D SAMIE_1035380 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D SAMIE_1021040 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D SAMIE_1021050 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SAMIE_1000520 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1002150 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1013850 SGM family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SAMIE_1006460 bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMIE_3001700 bifunctional lysylphosphatidylglycerol flippase/synthetase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMIE_1008080 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1020310 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1029970 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMIE_1008090 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D SAMIE_1020300 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D SAMIE_1029960 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump
D SAMIE_1001460 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1004840 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1008100 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1011790 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1029950 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D SAMIE_1011780 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SAMIE_1021530 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SAMIE_1018730 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SAMIE_3001070 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SAMIE_1011230 channel protein TolC K12340 tolC; outer membrane protein
D SAMIE_1018560 membrane protein K12340 tolC; outer membrane protein
D SAMIE_1030610 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sami00537]
D SAMIE_1006390 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sami03100]
D SAMIE_1TR0230 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0450 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0480 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMIE_1TR0110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0100 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0330 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMIE_1TR0280 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMIE_1TR0140 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMIE_1TR0150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMIE_1TR0540 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SAMIE_1TR0340 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SAMIE_1TR0310 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMIE_1TR0350 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMIE_1TR0520 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMIE_1TR0270 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMIE_1TR0410 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMIE_1TR0530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMIE_1TR0070 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMIE_1TR0260 tRNA-His K14226 tRNA-His; tRNA His
D SAMIE_1TR0440 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMIE_1TR0470 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMIE_1TR0220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0390 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0420 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMIE_1TR0170 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMIE_1TR0090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMIE_1TR0030 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMIE_1TR0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0120 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0460 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0490 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMIE_1TR0400 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SAMIE_1TR0130 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMIE_1TR0210 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMIE_1TR0380 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMIE_1TR0360 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0200 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0430 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0370 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMIE_1TR0500 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMIE_1TR0180 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMIE_1TR0300 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMIE_1TR0320 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SAMIE_1TR0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SAMIE_1TR0160 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMIE_1TR0010 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMIE_1TR0190 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMIE_1RR0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMIE_1RR0020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SAMIE_1032630 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D SAMIE_1032620 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D SAMIE_1030100 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D SAMIE_1005470 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D SAMIE_1016260 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D SAMIE_1019310 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D SAMIE_1019170 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D SAMIE_1022660 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D SAMIE_1019340 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D SAMIE_1020480 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D SAMIE_1007680 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D SAMIE_1007590 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D SAMIE_1004510 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1004660 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1004680 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1004820 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1015890 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1016860 NAD(P)H quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1026910 NADH oxidase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1029130 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1036030 NADH oxidase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SAMIE_1015830 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SAMIE_1027050 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SAMIE_1016560 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SAMIE_1016810 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SAMIE_1036020 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SAMIE_1028040 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SAMIE_1029180 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SAMIE_1003830 glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SAMIE_1011300 cytochrome b K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D SAMIE_1005300 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SAMIE_1029710 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SAMIE_1017960 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SAMIE_1034300 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SAMIE_1016550 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SAMIE_1004750 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SAMIE_1018400 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SAMIE_1010250 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SAMIE_1029690 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SAMIE_1002950 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D SAMIE_1016930 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D SAMIE_1020440 Fe2+-dependent dioxygenas K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D SAMIE_3001330 NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D SAMIE_1031620 LLM class flavin-dependent oxidoreductase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D SAMIE_1031800 LLM class flavin-dependent oxidoreductase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-]
D SAMIE_1022080 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SAMIE_1000240 arsenate reductase family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SAMIE_2000850 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SAMIE_1021980 KR domain-containing protein K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D SAMIE_1018570 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SAMIE_1007390 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SAMIE_1034380 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SAMIE_1009730 N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SAMIE_1003050 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D SAMIE_1007960 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D SAMIE_3000460 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D SAMIE_1020500 N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D SAMIE_1024910 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D SAMIE_1000160 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D SAMIE_1010010 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D SAMIE_1017090 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D SAMIE_1024810 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SAMIE_1017060 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SAMIE_1028810 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SAMIE_1017970 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D SAMIE_1010440 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D SAMIE_1029560 CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D SAMIE_1034040 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D SAMIE_1002840 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D SAMIE_1021290 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D SAMIE_1034690 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D SAMIE_1016600 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMIE_1028320 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMIE_1031310 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMIE_1035970 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMIE_2000540 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMIE_1032910 protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SAMIE_1034490 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D SAMIE_2000550 phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D SAMIE_1006600 DUF3391 domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D SAMIE_1006750 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SAMIE_1013080 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SAMIE_1027300 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SAMIE_1015610 hypothetical protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SAMIE_1032230 1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SAMIE_1032290 1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D SAMIE_1005840 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SAMIE_1004070 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D SAMIE_1022850 DUF5110 domain-containing protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D SAMIE_1029590 glycoside hydrolase family 31 protein K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D SAMIE_1022380 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMIE_1007200 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D SAMIE_1016150 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D SAMIE_1018180 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SAMIE_1029440 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SAMIE_1002430 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D SAMIE_1016240 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SAMIE_1021600 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SAMIE_1008420 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SAMIE_1018420 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D SAMIE_3000950 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D SAMIE_1007640 ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D SAMIE_1006200 gamma carbonic anhydrase family protein K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-]
D SAMIE_1000440 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D SAMIE_1033790 hypothetical protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D SAMIE_1015980 fatty acid--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D SAMIE_1023230 cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D SAMIE_3001260 cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D SAMIE_1030110 twin-arginine translocation pathway signal K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D SAMIE_1021480 sulfurtransferase FdhD K02379 fdhD; FdhD protein
D SAMIE_1001010 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D SAMIE_1020240 ferredoxin family protein K05524 fdxA; ferredoxin
D SAMIE_2000970 hypothetical protein K02164 norE; nitric oxide reductase NorE protein
D SAMIE_4000130 hypothetical protein K02164 norE; nitric oxide reductase NorE protein
D SAMIE_1016440 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D SAMIE_1028090 cysteine biosynthesis protein K06203 cysZ; CysZ protein
D SAMIE_1006160 VOC family protein K08234 yaeR; glyoxylase I family protein
D SAMIE_1028990 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D SAMIE_1035160 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D SAMIE_1015620 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ
D SAMIE_1032220 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ
D SAMIE_1032280 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ
D SAMIE_1003980 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D SAMIE_1036120 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D SAMIE_2000500 ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D SAMIE_1027880 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D SAMIE_1013210 ubiquinone-binding protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D SAMIE_1023520 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SAMIE_1034170 cold-shock protein K03704 cspA; cold shock protein
D SAMIE_1000660 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D SAMIE_1001480 ABC transporter ATP-binding protein/permease K13926 rbbA; ribosome-dependent ATPase
D SAMIE_1011840 ABC transporter ATP-binding protein/permease K13926 rbbA; ribosome-dependent ATPase
D SAMIE_1011470 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D SAMIE_3000910 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D SAMIE_1007710 DNA ligase-associated DEXH box helicase K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D SAMIE_1022610 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D SAMIE_1013500 trigger factor K03545 tig; trigger factor
D SAMIE_1033370 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SAMIE_1025360 ATP-binding protein K07391 comM; magnesium chelatase family protein
D SAMIE_1004470 peptidase K07395 K07395; putative proteasome-type protease
D SAMIE_1032920 OsmC family peroxiredoxin K07397 yhfA; putative redox protein
D SAMIE_1025490 XshC-Cox1-family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D SAMIE_1010070 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SAMIE_1025730 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D SAMIE_1034990 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D SAMIE_1021410 YraN family protein K07460 yraN; putative endonuclease
D SAMIE_1028250 endonuclease K07461 K07461; putative endonuclease
D SAMIE_1007790 DNA-protecting protein DprA K04096 smf; DNA processing protein
D SAMIE_1012560 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D SAMIE_1001050 virulence protein K06919 K06919; putative DNA primase/helicase
D SAMIE_1010580 virulence-associated protein E K06919 K06919; putative DNA primase/helicase
D SAMIE_1027250 virulence protein K06919 K06919; putative DNA primase/helicase
D SAMIE_1017550 hypothetical protein K07501 K07501; 3'-5' exonuclease
D SAMIE_1001780 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D SAMIE_4000190 IS6100 family transposase K18320 IS15; transposase, IS6 family
D SAMIE_4000380 IS6-like element IS6100 family transposase K18320 IS15; transposase, IS6 family
D SAMIE_4000460 IS6100 transposase K18320 IS15; transposase, IS6 family
D SAMIE_6000060 IS6-like element IS6100 family transposase K18320 IS15; transposase, IS6 family
D SAMIE_6000070 IS6-like element IS6100 family transposase K18320 IS15; transposase, IS6 family
D SAMIE_1011800 hypothetical protein K07483 K07483; transposase
D SAMIE_1017330 hypothetical protein K07483 K07483; transposase
D SAMIE_1017360 hypothetical protein K07483 K07483; transposase
D SAMIE_1017390 hypothetical protein K07483 K07483; transposase
D SAMIE_1025030 hypothetical protein K07483 K07483; transposase
D SAMIE_1028470 hypothetical protein K07483 K07483; transposase
D SAMIE_2000130 hypothetical protein K07483 K07483; transposase
D SAMIE_3000870 transposase K07483 K07483; transposase
D SAMIE_4000150 transposase K07483 K07483; transposase
D SAMIE_1011810 hypothetical protein K07484 K07484; transposase
D SAMIE_1011820 hypothetical protein K07484 K07484; transposase
D SAMIE_1017380 hypothetical protein K07484 K07484; transposase
D SAMIE_1017310 hypothetical protein K07484 K07484; transposase
D SAMIE_1017320 hypothetical protein K07484 K07484; transposase
D SAMIE_1017340 hypothetical protein K07484 K07484; transposase
D SAMIE_1017350 hypothetical protein K07484 K07484; transposase
D SAMIE_1017370 hypothetical protein K07484 K07484; transposase
D SAMIE_1025010 hypothetical protein K07484 K07484; transposase
D SAMIE_1025020 hypothetical protein K07484 K07484; transposase
D SAMIE_1028450 hypothetical protein K07484 K07484; transposase
D SAMIE_1028460 hypothetical protein K07484 K07484; transposase
D SAMIE_2000110 hypothetical protein K07484 K07484; transposase
D SAMIE_2000120 hypothetical protein K07484 K07484; transposase
D SAMIE_2000140 hypothetical protein K07484 K07484; transposase
D SAMIE_2000150 hypothetical protein K07484 K07484; transposase
D SAMIE_3000850 IS66 family transposase K07484 K07484; transposase
D SAMIE_3000860 hypothetical protein K07484 K07484; transposase
D SAMIE_4000160 hypothetical protein K07484 K07484; transposase
D SAMIE_4000170 hypothetical protein K07484 K07484; transposase
D SAMIE_1017600 IS110 family transposase K07486 K07486; transposase
D SAMIE_1035050 IS110 family transposase K07486 K07486; transposase
D SAMIE_1034950 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D SAMIE_1001740 transposase K07493 K07493; putative transposase
D SAMIE_1001820 transposase K07493 K07493; putative transposase
D SAMIE_1021850 transposase K07493 K07493; putative transposase
D SAMIE_1024570 hypothetical protein K07493 K07493; putative transposase
D SAMIE_1001200 integrase, catalytic region K07497 K07497; putative transposase
D SAMIE_1001220 integrase, catalytic region K07497 K07497; putative transposase
D SAMIE_2000040 transposase K07497 K07497; putative transposase
D SAMIE_3001550 transposase K07497 K07497; putative transposase
D SAMIE_1022960 IS6 family transposase K07498 K07498; putative transposase
D SAMIE_1023040 IS6 family transposase K07498 K07498; putative transposase
D SAMIE_1023080 IS6 family transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D SAMIE_1028290 phage shock protein PspA K03969 pspA; phage shock protein A
D SAMIE_1013830 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SAMIE_1030080 sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D SAMIE_1020770 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SAMIE_1022270 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SAMIE_1032790 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SAMIE_1003650 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SAMIE_1022910 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SAMIE_1033470 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D SAMIE_1002600 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SAMIE_1019690 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SAMIE_1000880 nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D SAMIE_1022340 septation protein IspZ K06190 ispZ; intracellular septation protein
D SAMIE_1006690 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D SAMIE_1023330 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D SAMIE_1023820 recombinase K06400 spoIVCA; site-specific DNA recombinase
D SAMIE_1030650 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D SAMIE_1025780 metalloendopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D SAMIE_1025480 carbon starvation protein A K06200 cstA; carbon starvation protein
D SAMIE_1000830 translational GTPase TypA K06207 typA; GTP-binding protein
D SAMIE_1013630 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D SAMIE_1007940 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SAMIE_1018030 NAD(P)-dependent oxidoreductase K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein
C 99992 Structural proteins
D SAMIE_1017020 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SAMIE_5000160 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SAMIE_1022530 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D SAMIE_1022540 capsule biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D SAMIE_1010360 glycoside hydrolase family 25 K07273 acm; lysozyme
D SAMIE_1023100 OmpW family protein K07275 ompW; outer membrane protein
D SAMIE_1007360 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D SAMIE_1001470 glycoside hydrolase family 43 K01993 ABC-2.TX; HlyD family secretion protein
D SAMIE_1011830 glycoside hydrolase family 43 K01993 ABC-2.TX; HlyD family secretion protein
D SAMIE_1004340 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D SAMIE_1027750 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D SAMIE_1007430 cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D SAMIE_1007460 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D SAMIE_1007470 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D SAMIE_1021890 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D SAMIE_1018140 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D SAMIE_1024240 hypothetical protein K03670 mdoG; periplasmic glucans biosynthesis protein
D SAMIE_1010220 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D SAMIE_1007230 copper resistance protein B K07233 pcoB; copper resistance protein B
D SAMIE_3001150 copper resistance protein B K07233 pcoB; copper resistance protein B
D SAMIE_3001450 copper resistance protein CopB K07233 pcoB; copper resistance protein B
D SAMIE_3001120 heavy metal resistance protein K24078 cnrR; nickel and cobalt resistance protein CnrR
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SAMIE_1017840 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D SAMIE_2000260 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D SAMIE_1011110 globin K06886 glbN; hemoglobin
D SAMIE_3001340 preprotein translocase subunit TatC K06886 glbN; hemoglobin
D SAMIE_1017990 hypothetical protein K07001 K07001; NTE family protein
D SAMIE_1035640 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D SAMIE_1017930 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D SAMIE_1026060 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SAMIE_1026020 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SAMIE_1033580 metal-dependent hydrolase K07038 K07038; inner membrane protein
D SAMIE_1017690 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D SAMIE_1035780 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D SAMIE_1026120 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE
D SAMIE_1028960 rhodanese domain-containing protein K07146 K07146; UPF0176 protein
D SAMIE_2000880 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D SAMIE_1022450 LemA family protein K03744 lemA; LemA protein
D SAMIE_1012810 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D SAMIE_1022470 hypothetical protein K08988 K08988; putative membrane protein
D SAMIE_1034360 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D SAMIE_3001310 hypothetical protein K09914 K09914; putative lipoprotein
D SAMIE_1011310 PhnA protein K06193 phnA; protein PhnA
D SAMIE_1035450 PhnA protein K06193 phnA; protein PhnA
D SAMIE_2000510 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D SAMIE_1028920 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D SAMIE_2001390 hypothetical protein K06867 K06867; uncharacterized protein
D SAMIE_1022460 methanol dehydrogenase K06872 K06872; uncharacterized protein
D SAMIE_1019350 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D SAMIE_1003330 BAX inhibitor (BI)-1/YccA family protein K06890 K06890; uncharacterized protein
D SAMIE_2000570 BAX inhibitor (BI)-1/YccA family protein K06890 K06890; uncharacterized protein
D SAMIE_1026890 hypothetical protein K06893 K06893; uncharacterized protein
D SAMIE_1033600 hypothetical protein K06893 K06893; uncharacterized protein
D SAMIE_1016790 DUF815 domain-containing protein K06923 K06923; uncharacterized protein
D SAMIE_1020490 CoA-binding protein K06929 K06929; uncharacterized protein
D SAMIE_1028970 phosphoesterase K06953 K06953; uncharacterized protein
D SAMIE_1007180 hypothetical protein K06978 K06978; uncharacterized protein
D SAMIE_1015820 hypothetical protein K06978 K06978; uncharacterized protein
D SAMIE_1022720 hypothetical protein K06978 K06978; uncharacterized protein
D SAMIE_1029460 peptidase S15 K06978 K06978; uncharacterized protein
D SAMIE_1034620 hypothetical protein K06978 K06978; uncharacterized protein
D SAMIE_1035890 DUF2334 domain-containing protein K06986 K06986; uncharacterized protein
D SAMIE_1021950 VOC family protein K06996 K06996; uncharacterized protein
D SAMIE_1013890 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D SAMIE_1011060 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein
D SAMIE_1020560 glyoxalase K07032 K07032; uncharacterized protein
D SAMIE_1017790 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D SAMIE_1018860 amidohydrolase K07045 K07045; uncharacterized protein
D SAMIE_3001590 metal-dependent hydrolase K07045 K07045; uncharacterized protein
D SAMIE_1017980 zinc metalloprotease K07054 K07054; uncharacterized protein
D SAMIE_1010860 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein
D SAMIE_1032660 DNA-binding protein K07068 K07068; uncharacterized protein
D SAMIE_1009210 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D SAMIE_1019370 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D SAMIE_1000470 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1001250 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1005890 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1007690 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1011530 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1014210 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1016530 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1019540 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMIE_1019780 hypothetical protein K07090 K07090; uncharacterized protein
D SAMIE_1009450 phosphohydrolase K07098 K07098; uncharacterized protein
D SAMIE_1004930 NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D SAMIE_1004980 NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D SAMIE_1016100 NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D SAMIE_1002060 sel1 repeat family protein K07126 K07126; uncharacterized protein
D SAMIE_1007060 sel1 repeat family protein K07126 K07126; uncharacterized protein
D SAMIE_1010510 hypothetical protein K07126 K07126; uncharacterized protein
D SAMIE_1027420 GST-like protein K07136 K07136; uncharacterized protein
D SAMIE_1020710 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D SAMIE_1009710 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D SAMIE_1021610 ATP-dependent protease K07157 K07157; uncharacterized protein
D SAMIE_1000190 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D SAMIE_1014930 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D SAMIE_1028940 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D SAMIE_1005800 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D SAMIE_4000420 hypothetical protein K09780 K09780; uncharacterized protein
D SAMIE_1004240 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D SAMIE_1003730 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D SAMIE_1027350 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D SAMIE_1003780 DUF541 domain-containing protein K09807 K09807; uncharacterized protein
D SAMIE_1032810 N-acetyltransferase K09919 K09919; uncharacterized protein
D SAMIE_1004480 hypothetical protein K09922 K09922; uncharacterized protein
D SAMIE_1033380 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D SAMIE_1023550 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D SAMIE_1017030 hypothetical protein K09939 K09939; uncharacterized protein
D SAMIE_1034060 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D SAMIE_1006630 TraB/GumN family protein K09973 K09973; uncharacterized protein
D SAMIE_1006640 TraB/GumN family protein K09973 K09973; uncharacterized protein
D SAMIE_1010090 DUF1318 domain-containing protein K09978 K09978; uncharacterized protein
D SAMIE_1021680 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D SAMIE_1025350 hypothetical protein K09985 K09985; uncharacterized protein
D SAMIE_1012490 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D SAMIE_1016830 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D SAMIE_1015020 VWA domain-containing protein K09989 K09989; uncharacterized protein
D SAMIE_1018550 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein
D SAMIE_1032700 trehalose utilization K09992 K09992; uncharacterized protein
D SAMIE_1033480 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
D SAMIE_1005500 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 29, 2024