+C RNA KO
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Non-coding RNAs - Shewanella benthica
%
!
ATransfer RNA
B SHEWBE_TRNA12 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SHEWBE_TRNA29 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SHEWBE_TRNA6 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SHEWBE_TRNA65 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SHEWBE_TRNA72 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SHEWBE_TRNA26 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA78 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA80 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA81 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA82 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA83 Pseudo tRNA K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA84 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA85 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SHEWBE_TRNA49 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SHEWBE_TRNA50 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SHEWBE_TRNA51 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SHEWBE_TRNA52 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SHEWBE_TRNA53 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SHEWBE_TRNA11 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B SHEWBE_TRNA14 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B SHEWBE_TRNA48 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B SHEWBE_TRNA45 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
B SHEWBE_TRNA62 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
B SHEWBE_TRNA90 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B SHEWBE_TRNA93 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B SHEWBE_TRNA94 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B SHEWBE_TRNA66 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SHEWBE_TRNA67 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SHEWBE_TRNA68 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SHEWBE_TRNA69 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SHEWBE_TRNA70 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SHEWBE_TRNA71 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SHEWBE_TRNA16 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SHEWBE_TRNA17 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SHEWBE_TRNA18 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SHEWBE_TRNA44 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SHEWBE_TRNA63 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SHEWBE_TRNA8 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SHEWBE_TRNA27 tRNA-His K14226 tRNA-His; tRNA His
B SHEWBE_TRNA3 tRNA-His K14226 tRNA-His; tRNA His
B SHEWBE_TRNA13 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B SHEWBE_TRNA28 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B SHEWBE_TRNA7 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B SHEWBE_TRNA19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA46 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA61 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA88 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA89 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA91 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA95 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA99 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SHEWBE_TRNA31 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SHEWBE_TRNA32 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SHEWBE_TRNA33 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SHEWBE_TRNA34 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SHEWBE_TRNA35 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SHEWBE_TRNA36 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SHEWBE_TRNA20 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA39 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA40 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA41 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA42 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA58 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA60 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA87 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA92 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA96 tRNA-Met K14230 tRNA-Met; tRNA Met
B SHEWBE_TRNA22 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B SHEWBE_TRNA24 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B SHEWBE_TRNA98 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B SHEWBE_TRNA1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B SHEWBE_TRNA2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B SHEWBE_TRNA25 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B SHEWBE_TRNA30 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B SHEWBE_TRNA43 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SHEWBE_TRNA5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SHEWBE_TRNA64 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SHEWBE_TRNA79 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SHEWBE_TRNA86 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SHEWBE_TRNA10 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SHEWBE_TRNA15 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SHEWBE_TRNA21 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SHEWBE_TRNA23 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SHEWBE_TRNA97 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
B SHEWBE_TRNA54 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B SHEWBE_TRNA55 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B SHEWBE_TRNA56 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B SHEWBE_TRNA9 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B SHEWBE_TRNA57 tRNA-Val K14237 tRNA-Val; tRNA Val
B SHEWBE_TRNA59 tRNA-Val K14237 tRNA-Val; tRNA Val
B SHEWBE_TRNA73 tRNA-Val K14237 tRNA-Val; tRNA Val
B SHEWBE_TRNA74 tRNA-Val K14237 tRNA-Val; tRNA Val
B SHEWBE_TRNA75 tRNA-Val K14237 tRNA-Val; tRNA Val
B SHEWBE_TRNA76 tRNA-Val K14237 tRNA-Val; tRNA Val
B SHEWBE_TRNA77 tRNA-Val K14237 tRNA-Val; tRNA Val
#
ARibosomal RNA
B Prokaryotic rRNA
C SHEWBE_RRNA12 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA13 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA16 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA19 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA23 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA26 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA29 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA3 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA34 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA6 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA9 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SHEWBE_RRNA11 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA14 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA17 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA2 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA20 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA24 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA27 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA30 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA33 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA5 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA8 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SHEWBE_RRNA1 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA10 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA15 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA18 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA21 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA22 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA25 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA28 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA31 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA32 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA4 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SHEWBE_RRNA7 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
B Eukaryotic rRNA
B Mitochondrial rRNA
B Chloroplast rRNA
#
AOther prokaryotic RNA
B transfer-messenger RNA
C SHEWBE_TMRNA1 SHEWBE_TMRNA1 K15035 ssrA; transfer-messenger RNA
B Ribonuclease P
C SHEWBE_MISCRNA7 RNaseP_bact_a K01978 rnpB; M1 RNA
B Signal recognition particle
C SHEWBE_MISCRNA15 Bacteria_small_SRP K01983 ffs; SRP RNA
B Antisense regulators
C SHEWBE_MISCRNA22 SraC_RyeA K28182 ryeA; small antisense RNA RyeA
B Small regulatory RNAs
C SHEWBE_MISCRNA6 Spot_42 K18527 spf; small regulatory RNA Spot 42
C SHEWBE_MISCRNA23 SdsR_RyeB K28181 sdsR; small regulatory RNA SdsR
#
ASmall nuclear RNA
B Sm-class snRNA
B Lsm-class snRNA
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ASmall nucleolar RNA
#
AOther eukaryotic RNA
B Micro RNA
B Small Cajal body-specific RNA
B Unclassified
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 3, 2025