+D GENES KO
#
KEGG Orthology (KO) - Spiroplasma clarkii
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:scla00010]
D SCLARK_00864 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00205 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00998 glk1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00619 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001537 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCLARK_0026 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCLARK_001701 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCLARK_001640 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCLARK_001634 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCLARK_00326 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCLARK_00327 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_001852 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCLARK_001137 adhT1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SCLARK_001487 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCLARK_001119 bgl2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_001148 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_001184 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_001383 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_00705 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_001812 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCLARK_001200 phosphotransferase system, EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00874 ptsG2; PTS sugar transporter K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_001379 glucose-specific PTS system IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00246 PTS system, N-acetylglucosamine-specific IIA component PTS system, N-acetylglucosamine-specific IIB component PTS system, N-acetylglucosamine-specific IIC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle) [PATH:scla00020]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_00326 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCLARK_00327 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
C 00030 Pentose phosphate pathway [PATH:scla00030]
D SCLARK_00619 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCLARK_001141 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCLARK_00723 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCLARK_001139 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCLARK_00996 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCLARK_00143 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCLARK_00724 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCLARK_001028 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SCLARK_00730 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SCLARK_001487 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCLARK_0055 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SCLARK_001801 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SCLARK_001258 kdgK; putative 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SCLARK_0026 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCLARK_001537 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:scla00040]
D SCLARK_001255 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1 (KduI) K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D SCLARK_001257 short-chain-alcohol dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D SCLARK_001368 Hexulose 6 phosphate synthase (HUMPS) K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SCLARK_001367 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SCLARK_001366 sugar isomerase SgaE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SCLARK_001141 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCLARK_00723 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCLARK_001175 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:scla00051]
D SCLARK_001828 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SCLARK_001175 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001537 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCLARK_00262 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SCLARK_00259 sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D SCLARK_001069 fruK1; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SCLARK_00182 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SCLARK_0026 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCLARK_001701 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCLARK_00143 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCLARK_00724 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCLARK_005 fruB2; PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SCLARK_00608 fruB1; PTS system fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00292 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00694 PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00260 mtlF; Phosphotransferase system PTS,Mannitol Permease IIA Component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001316 sgaA; PTS ascorbate transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001539 PTS system, mannitol-permease iia component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001670 PTS system, mannitol-specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001671 PTS system, mannitol-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_00258 PTS system, mannitol-specific IIBC component, putative K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_001672 PTS system, Lactose/Cellobiose specific IIB subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:scla00052]
D SCLARK_001487 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCLARK_00864 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00205 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00998 glk1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_001277 hypothetical protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D SCLARK_001172 hypothetical protein K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SCLARK_001171 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_00194 fructose/tagatose bisphosphate aldolase, class II K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D SCLARK_00203 Ribose 5-phosphate isomerase B K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SCLARK_00208 Beta-glucosidase; 6-phospho-beta-glucosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SCLARK_00209 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_00215 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_00223 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_001051 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SCLARK_00161 glycosyl hydrolase, family 13 K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D SCLARK_001274 PTS system, N-acetylgalactosamine-specific, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SCLARK_001271 hypothetical protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SCLARK_00180 tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:scla00053]
D SCLARK_001143 pentitol phosphotransferase enzyme II K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_001369 sgaA; PTS sugar transporter subunit IIAB K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_00695 PTS system enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_001140 PTS system ascorbate-specific enzyme IIC/IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001235 PTS system, IIBC component, putative K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001315 ulaB; ascorbate-specific phosphotransferase enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001370 PTS system enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_00688 hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001145 putative PTS system enzyme IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001234 sgaT; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001314 PTS system ascorbate-specific enzyme IIC/IIB K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_00689 sgaT; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001368 Hexulose 6 phosphate synthase (HUMPS) K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SCLARK_001367 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SCLARK_001366 sugar isomerase SgaE K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:scla00500]
D SCLARK_001154 PTS system, IIabc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_001197 PTS system beta-glucoside-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_00186 scrA; PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_001051 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SCLARK_001108 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001183 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001213 lichenan-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001357 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_00679 celC; PTS system lactose/cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001112 celA2; PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001114 celA; PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001188 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001205 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001361 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_00671 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001113 celB2; PTS system cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D SCLARK_001360 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SCLARK_001119 bgl2; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_001148 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_001184 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_001383 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_00705 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SCLARK_00165 Neopullulanase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D SCLARK_00161 glycosyl hydrolase, family 13 K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D SCLARK_00160 glycosyl hydrolase, family 65 (trehalase) K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D SCLARK_001715 beta-phosphoglucomutase (beta-pgm) K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D SCLARK_001812 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCLARK_00246 PTS system, N-acetylglucosamine-specific IIA component PTS system, N-acetylglucosamine-specific IIB component PTS system, N-acetylglucosamine-specific IIC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SCLARK_001716 Glycosyl hydrolase, family 65 K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D SCLARK_001052 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SCLARK_001713 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SCLARK_001487 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCLARK_00864 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00205 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00998 glk1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00619 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:scla00520]
D SCLARK_001512 hypothetical protein K13381 chiA; bifunctional chitinase/lysozyme [EC:3.2.1.14 3.2.1.17]
D SCLARK_001812 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCLARK_00181 nagE1; PTS system N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCLARK_001321 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SCLARK_001358 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D SCLARK_001365 anmK; Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D SCLARK_001201 thiamine monophosphate synthase/TENI K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SCLARK_001380 thiamine monophosphate synthase/TENI K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SCLARK_001200 phosphotransferase system, EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00874 ptsG2; PTS sugar transporter K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_001379 glucose-specific PTS system IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00246 PTS system, N-acetylglucosamine-specific IIA component PTS system, N-acetylglucosamine-specific IIB component PTS system, N-acetylglucosamine-specific IIC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SCLARK_00864 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00205 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00998 glk1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_001487 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCLARK_00619 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCLARK_001828 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:scla00620]
D SCLARK_00326 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCLARK_00327 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_00391 pflD; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SCLARK_001137 adhT1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SCLARK_001634 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCLARK_001852 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCLARK_00992 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SCLARK_00549 beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SCLARK_00993 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:scla00630]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_001801 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:scla00640]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_00391 pflD; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SCLARK_001852 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:scla00650]
D SCLARK_00391 pflD; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SCLARK_001796 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SCLARK_001795 acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:scla00660]
D SCLARK_001796 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SCLARK_001795 acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00562 Inositol phosphate metabolism [PATH:scla00562]
D SCLARK_001029 oxioreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D SCLARK_001701 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:scla00190]
D SCLARK_00175 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SCLARK_00174 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SCLARK_00171 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SCLARK_00167 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SCLARK_00170 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SCLARK_00168 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SCLARK_001535 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:scla00710]
D SCLARK_0026 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCLARK_001537 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCLARK_001139 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCLARK_00996 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCLARK_00143 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCLARK_00724 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCLARK_001701 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCLARK_001141 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCLARK_00723 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:scla00720]
D SCLARK_001707 folD; methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:scla00680]
D SCLARK_001640 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCLARK_0026 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCLARK_001537 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism
D SCLARK_0020 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SCLARK_00374 phosphoesterase RecJ domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D SCLARK_00435 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D SCLARK_001137 adhT1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:scla00561]
D SCLARK_001168 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D SCLARK_001167 dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SCLARK_001166 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SCLARK_0028 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SCLARK_00567 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SCLARK_00802 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:scla00564]
D SCLARK_0029 glpO; glycerol-3-phosphate oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SCLARK_00802 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SCLARK_00818 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SCLARK_00455 pgsA; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:scla00230]
D SCLARK_001487 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCLARK_0055 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SCLARK_0051 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SCLARK_001074 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SCLARK_001832 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SCLARK_0049 hprT3; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SCLARK_00424 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SCLARK_00423 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SCLARK_001103 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SCLARK_00421 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SCLARK_00991 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SCLARK_00458 nrdF; ribonucleoside diphosphate reductase 2 betachain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCLARK_001399 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SCLARK_00582 ymdB; putative metallophosphatase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SCLARK_00357 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:scla00240]
D SCLARK_001565 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SCLARK_001519 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SCLARK_001041 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SCLARK_00144 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SCLARK_00582 ymdB; putative metallophosphatase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SCLARK_00803 deoA; thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SCLARK_00832 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SCLARK_001399 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SCLARK_00458 nrdF; ribonucleoside diphosphate reductase 2 betachain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCLARK_00794 comEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SCLARK_0019 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:scla00250]
D SCLARK_00102 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SCLARK_0051 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C 00260 Glycine, serine and threonine metabolism [PATH:scla00260]
D SCLARK_00388 crtI; phytoene dehydrogenase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00270 Cysteine and methionine metabolism [PATH:scla00270]
D SCLARK_00885 aminotransferase, classes I and II, putative K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SCLARK_001339 modification methylase Sau3AI (GATC cytosine-specific methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001378 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001852 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:scla00280]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:scla00290]
D SCLARK_001796 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00300 Lysine biosynthesis
D SCLARK_001576 ytjP; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C 00310 Lysine degradation
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
D SCLARK_001608 arcB; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
C 00330 Arginine and proline metabolism
D SCLARK_00388 crtI; phytoene dehydrogenase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00340 Histidine metabolism
D SCLARK_00388 crtI; phytoene dehydrogenase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:scla00350]
D SCLARK_00388 crtI; phytoene dehydrogenase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SCLARK_001137 adhT1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
D SCLARK_00388 crtI; phytoene dehydrogenase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00380 Tryptophan metabolism [PATH:scla00380]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_00388 crtI; phytoene dehydrogenase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:scla00450]
D SCLARK_00885 aminotransferase, classes I and II, putative K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SCLARK_00604 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SCLARK_001865 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SCLARK_0048 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D SCLARK_00102 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
D SCLARK_001828 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00550 Peptidoglycan biosynthesis
D SCLARK_00817 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:scla00730]
D SCLARK_00473 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCLARK_00540 thiN; thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SCLARK_00357 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:scla00740]
D SCLARK_00324 yitU; phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SCLARK_00849 HAD family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SCLARK_001776 HAD superfamily hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SCLARK_001400 ribC; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:scla00760]
D SCLARK_00444 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SCLARK_001832 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SCLARK_001454 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SCLARK_001499 cinA; competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SCLARK_001413 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D SCLARK_001596 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:scla00770]
D SCLARK_001796 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SCLARK_00395 putative transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D SCLARK_001803 hypothetical protein K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SCLARK_00396 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SCLARK_00798 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism [PATH:scla00785]
D SCLARK_00325 lplA; lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_00326 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCLARK_00327 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
C 00790 Folate biosynthesis [PATH:scla00790]
D SCLARK_00843 hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D SCLARK_00801 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SCLARK_001871 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:scla00670]
D SCLARK_00801 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SCLARK_001707 folD; methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:scla00900]
D SCLARK_0037 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SCLARK_001551 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SCLARK_00844 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SCLARK_00817 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SCLARK_001139 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCLARK_00996 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:scla00521]
D SCLARK_00864 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00205 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00998 glk1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_001487 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SCLARK_00864 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00205 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCLARK_00998 glk1; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SCLARK_00435 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:scla00625]
D SCLARK_001137 adhT1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:scla00626]
D SCLARK_001137 adhT1; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:scla03020]
D SCLARK_00362 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCLARK_0033 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:scla03010]
D SCLARK_00354 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SCLARK_00106 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SCLARK_00306 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SCLARK_00350 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SCLARK_00332 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SCLARK_00361 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SCLARK_00305 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SCLARK_00360 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SCLARK_00349 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCLARK_001386 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SCLARK_001559 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SCLARK_00344 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SCLARK_00108 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SCLARK_00337 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SCLARK_00956 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SCLARK_001017 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SCLARK_00336 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SCLARK_00333 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SCLARK_00334 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SCLARK_00133 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SCLARK_00109 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SCLARK_00132 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SCLARK_00127 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SCLARK_00345 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SCLARK_00355 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SCLARK_00341 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SCLARK_00363 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SCLARK_00353 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SCLARK_001555 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SCLARK_001579 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SCLARK_00338 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SCLARK_00335 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SCLARK_00346 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SCLARK_001577 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SCLARK_00543 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SCLARK_0023 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SCLARK_00765 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SCLARK_001920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCLARK_001921 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCLARK_001919 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCLARK_001918 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCLARK_001917 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCLARK_001916 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:scla00970]
D SCLARK_001905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCLARK_001890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCLARK_001903 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCLARK_001897 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCLARK_001910 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCLARK_001896 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SCLARK_001893 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCLARK_001898 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCLARK_001914 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCLARK_001887 tRNA-His K14226 tRNA-His; tRNA His
D SCLARK_001912 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCLARK_001915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCLARK_001895 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCLARK_001902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCLARK_001894 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCLARK_001901 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCLARK_001906 tRNA-Met K14230 tRNA-Met; tRNA Met
D SCLARK_001909 tRNA-Met K14230 tRNA-Met; tRNA Met
D SCLARK_001907 tRNA-Met K14230 tRNA-Met; tRNA Met
D SCLARK_001911 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCLARK_001904 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCLARK_001908 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCLARK_001913 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCLARK_001900 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCLARK_001891 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCLARK_001889 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SCLARK_001892 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCLARK_001899 tRNA-Val K14237 tRNA-Val; tRNA Val
D SCLARK_001888 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D SCLARK_001787 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SCLARK_00331 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCLARK_001060 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCLARK_001826 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCLARK_00120 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCLARK_0048 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCLARK_00952 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCLARK_00790 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCLARK_00101 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCLARK_001686 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCLARK_001061 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCLARK_001597 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:scla03060]
D SCLARK_00356 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SCLARK_001860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCLARK_001268 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SCLARK_0071 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCLARK_00193 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCLARK_00791 lsp; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:scla04122]
D SCLARK_001439 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SCLARK_00473 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:scla03018]
D SCLARK_001640 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCLARK_001497 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SCLARK_001593 metallo-beta-lactamase superfamily hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001443 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:scla03030]
D SCLARK_0074 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCLARK_00110 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SCLARK_00839 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SCLARK_00107 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCLARK_001488 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SCLARK_00795 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SCLARK_001788 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:scla03410]
D SCLARK_00117 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SCLARK_00484 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SCLARK_001788 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:scla03420]
D SCLARK_001820 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCLARK_001788 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:scla03430]
D SCLARK_001820 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCLARK_00107 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCLARK_0074 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCLARK_001788 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:scla03440]
D SCLARK_00107 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCLARK_00836 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SCLARK_001498 recA; recombinase A K03553 recA; recombination protein RecA
D SCLARK_001013 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SCLARK_0074 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:scla02010]
D SCLARK_00155 Multiple sugar-binding transport ATP-binding protein MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SCLARK_00256 malK; maltodextrin ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SCLARK_00271 ABC-type transport system, ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SCLARK_00153 Maltose ABC transporter permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SCLARK_00255 Maltose ABC transporter permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SCLARK_00268 Putative polysaccharid ABC-type transport system, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SCLARK_001840 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SCLARK_001837 ribose/galactose ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SCLARK_001833 ribose/galactose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SCLARK_00229 lipoprotein (VslE) K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00244 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00729 rbsB; periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00228 putative ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D SCLARK_00243 putative ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D SCLARK_00728 putative ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D SCLARK_00725 hypothetical protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D SCLARK_00571 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SCLARK_00576 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SCLARK_00371 phnC; phosphonate transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SCLARK_00781 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SCLARK_00773 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SCLARK_00774 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SCLARK_00377 cbiQ; cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D SCLARK_00375 cbiO2; cobalt ABC transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCLARK_00376 cbiO; cobalt ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS) [PATH:scla02060]
D SCLARK_001819 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D SCLARK_001812 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCLARK_001200 phosphotransferase system, EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00874 ptsG2; PTS sugar transporter K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_001379 glucose-specific PTS system IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00181 nagE1; PTS system N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCLARK_00246 PTS system, N-acetylglucosamine-specific IIA component PTS system, N-acetylglucosamine-specific IIB component PTS system, N-acetylglucosamine-specific IIC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SCLARK_001154 PTS system, IIabc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_001197 PTS system beta-glucoside-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_00186 scrA; PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_001149 beta-glucoside PTS system IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SCLARK_001385 beta-glucoside PTS system IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SCLARK_00894 beta-glucoside PTS system IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SCLARK_001052 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SCLARK_001713 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SCLARK_001321 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SCLARK_00260 mtlF; Phosphotransferase system PTS,Mannitol Permease IIA Component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001316 sgaA; PTS ascorbate transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001539 PTS system, mannitol-permease iia component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001670 PTS system, mannitol-specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001671 PTS system, mannitol-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_00258 PTS system, mannitol-specific IIBC component, putative K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_001672 PTS system, Lactose/Cellobiose specific IIB subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_00209 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_00215 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_00223 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_001108 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001183 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001213 lichenan-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001357 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_00679 celC; PTS system lactose/cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001112 celA2; PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001114 celA; PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001188 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001205 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001361 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_00671 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001113 celB2; PTS system cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D SCLARK_001360 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SCLARK_001274 PTS system, N-acetylgalactosamine-specific, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SCLARK_001271 hypothetical protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SCLARK_001172 hypothetical protein K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SCLARK_001171 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D SCLARK_001174 hypothetical protein K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SCLARK_001143 pentitol phosphotransferase enzyme II K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_001369 sgaA; PTS sugar transporter subunit IIAB K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_00695 PTS system enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_001140 PTS system ascorbate-specific enzyme IIC/IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001235 PTS system, IIBC component, putative K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001315 ulaB; ascorbate-specific phosphotransferase enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001370 PTS system enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_00688 hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001145 putative PTS system enzyme IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001234 sgaT; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001314 PTS system ascorbate-specific enzyme IIC/IIB K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_00689 sgaT; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_00608 fruB1; PTS system fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00292 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00694 PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_005 fruB2; PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SCLARK_001069 fruK1; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SCLARK_00182 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:scla03070]
D SCLARK_001860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCLARK_00356 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SCLARK_001268 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SCLARK_0071 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCLARK_00193 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:scla02020]
D SCLARK_00571 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SCLARK_0073 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SCLARK_001808 hypothetical protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D SCLARK_001807 putative citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SCLARK_001806 hypothetical protein K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D SCLARK_001802 hypothetical protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D SCLARK_001810 citP; Citrate-sodium symport K11616 maeN; malate:Na+ symporter
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:scla02024]
D SCLARK_00781 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SCLARK_00773 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SCLARK_00774 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SCLARK_0071 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCLARK_001860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCLARK_00356 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SCLARK_001268 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SCLARK_00193 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D SCLARK_00229 lipoprotein (VslE) K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00244 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00729 rbsB; periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SCLARK_001640 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D SCLARK_00781 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SCLARK_00773 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SCLARK_00774 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:scla01000]
C 01001 Protein kinases [BR:scla01001]
D SCLARK_00535 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:scla01009]
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:scla01002]
D SCLARK_00791 lsp; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SCLARK_00421 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SCLARK_001416 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D SCLARK_001794 CAAX amino terminal membrane bound protease K07052 K07052; CAAX protease family protein
D SCLARK_001576 ytjP; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCLARK_00358 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SCLARK_0094 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SCLARK_00821 rseP; inner membrane zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SCLARK_001423 lonA; class III heat-shock ATP-dependent LonA protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:scla01011]
C 01004 Lipid biosynthesis proteins [BR:scla01004]
D SCLARK_00567 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SCLARK_00802 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:scla01006]
D SCLARK_00817 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 01007 Amino acid related enzymes [BR:scla01007]
D SCLARK_001597 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SCLARK_00120 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCLARK_0048 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCLARK_00790 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCLARK_00952 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCLARK_00101 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCLARK_001060 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCLARK_001826 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCLARK_001061 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCLARK_001686 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCLARK_00331 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCLARK_00885 aminotransferase, classes I and II, putative K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:scla00194]
D SCLARK_00175 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SCLARK_00174 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SCLARK_00171 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SCLARK_00170 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SCLARK_00168 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SCLARK_00167 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:scla03000]
D SCLARK_001339 modification methylase Sau3AI (GATC cytosine-specific methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001378 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001053 fruR2; DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SCLARK_001070 fruR2; DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SCLARK_00195 fruR; DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SCLARK_001317 hypothetical protein K03491 licR; probable licABCH operon transcriptional regulator
D SCLARK_0041 parB; site-specific DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCLARK_001445 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D SCLARK_00767 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:scla03021]
D SCLARK_00362 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCLARK_0033 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SCLARK_001412 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SCLARK_00982 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SCLARK_00124 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SCLARK_001583 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:scla03019]
D SCLARK_00568 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCLARK_001593 metallo-beta-lactamase superfamily hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SCLARK_001497 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SCLARK_00596 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SCLARK_001098 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SCLARK_001640 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCLARK_001233 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001635 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCLARK_001443 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
C 03041 Spliceosome
C 03011 Ribosome [BR:scla03011]
D SCLARK_00354 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SCLARK_00106 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SCLARK_00306 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SCLARK_00350 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SCLARK_00332 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SCLARK_00361 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SCLARK_00305 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SCLARK_00360 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SCLARK_00349 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCLARK_001386 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SCLARK_001559 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SCLARK_00344 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SCLARK_00108 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SCLARK_00337 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SCLARK_00956 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SCLARK_001017 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SCLARK_00336 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SCLARK_00333 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SCLARK_00334 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SCLARK_00109 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SCLARK_00132 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SCLARK_00127 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SCLARK_00133 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SCLARK_00345 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SCLARK_00355 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SCLARK_00341 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SCLARK_00363 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SCLARK_00353 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SCLARK_001555 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SCLARK_001579 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SCLARK_00338 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SCLARK_00335 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SCLARK_00346 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SCLARK_001577 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SCLARK_00543 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SCLARK_0023 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SCLARK_00765 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SCLARK_001917 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCLARK_001916 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCLARK_001920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCLARK_001921 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCLARK_001919 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCLARK_001918 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:scla03009]
D SCLARK_00568 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCLARK_00835 era; GTP-binding protein Era K03595 era; GTPase
D SCLARK_001457 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D SCLARK_001412 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SCLARK_00982 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SCLARK_00124 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SCLARK_0059 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SCLARK_00517 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SCLARK_001406 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SCLARK_00768 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SCLARK_00121 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SCLARK_001490 yydA; rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SCLARK_00532 yloN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SCLARK_001793 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SCLARK_00792 rluD; ribosomal large subunit pseudouridylate synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SCLARK_001557 rimM; 16S rRNA processing protein rimM K02860 rimM; 16S rRNA processing protein RimM
D SCLARK_001098 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SCLARK_001518 engA; GTP-binding protein EngA K03977 engA; GTPase
D SCLARK_001489 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
D SCLARK_00999 yqeH; GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase
D SCLARK_00294 sua5; tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SCLARK_001408 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SCLARK_00830 yqfG; metalloprotease K07042 ybeY; probable rRNA maturation factor
C 03016 Transfer RNA biogenesis [BR:scla03016]
D SCLARK_001686 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCLARK_00790 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCLARK_0048 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCLARK_00101 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCLARK_001060 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCLARK_00331 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCLARK_001826 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCLARK_00120 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCLARK_00952 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCLARK_001061 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCLARK_001597 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SCLARK_00597 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SCLARK_001843 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SCLARK_00378 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SCLARK_001401 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SCLARK_00294 sua5; tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SCLARK_0047 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SCLARK_0072 rnpA; ribonuclease P (protein C5) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SCLARK_0082 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SCLARK_00100 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SCLARK_00949 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SCLARK_001556 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SCLARK_00842 trmK; tRNA: m1A22 methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SCLARK_001099 cspR; RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SCLARK_00624 spoU; RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D SCLARK_001439 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SCLARK_00473 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCLARK_001691 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SCLARK_001831 gcp; DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SCLARK_001692 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
C 03012 Translation factors [BR:scla03012]
D SCLARK_001409 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SCLARK_001600 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SCLARK_00308 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SCLARK_00307 fusA; elongation factor G K02355 fusA; elongation factor G
D SCLARK_0018 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SCLARK_001564 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SCLARK_0017 prmC; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SCLARK_0054 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SCLARK_00359 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SCLARK_001433 efp; elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:scla03110]
D SCLARK_001719 ATPase AAA-2 domain-containing protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SCLARK_001443 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SCLARK_0095 hslO; heat shock protein 33 K04083 hslO; molecular chaperone Hsp33
D SCLARK_001444 grpE; molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D SCLARK_0094 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SCLARK_00167 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SCLARK_001775 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:scla04131]
D SCLARK_001634 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:scla03032]
D SCLARK_001339 modification methylase Sau3AI (GATC cytosine-specific methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001378 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001515 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SCLARK_0073 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SCLARK_00110 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SCLARK_00839 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SCLARK_00107 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCLARK_0074 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCLARK_001488 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SCLARK_00795 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SCLARK_001788 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03036 Chromosome and associated proteins [BR:scla03036]
D SCLARK_001339 modification methylase Sau3AI (GATC cytosine-specific methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001378 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_00568 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCLARK_001515 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SCLARK_0073 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SCLARK_001549 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SCLARK_001548 scpB; chromosome condensation and segregation factor B K06024 scpB; segregation and condensation protein B
D SCLARK_00769 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SCLARK_00770 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SCLARK_0063 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_0064 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_0065 mreB5; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_001522 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_00600 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_0041 parB; site-specific DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCLARK_0047 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SCLARK_00949 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SCLARK_00903 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein
D SCLARK_001863 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:scla03400]
D SCLARK_00117 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SCLARK_00484 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SCLARK_001788 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SCLARK_001820 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCLARK_00362 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCLARK_0033 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SCLARK_0074 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCLARK_00107 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCLARK_001498 recA; recombinase A K03553 recA; recombination protein RecA
D SCLARK_001013 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SCLARK_001023 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D SCLARK_00836 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SCLARK_001513 recU; Holliday junction-specific endonuclease K03700 recU; recombination protein U
D SCLARK_001515 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SCLARK_00458 nrdF; ribonucleoside diphosphate reductase 2 betachain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCLARK_0020 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SCLARK_00374 phosphoesterase RecJ domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:scla03029]
D SCLARK_001409 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SCLARK_001600 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SCLARK_00308 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SCLARK_00307 fusA; elongation factor G K02355 fusA; elongation factor G
D SCLARK_00835 era; GTP-binding protein Era K03595 era; GTPase
D SCLARK_001060 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCLARK_001787 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SCLARK_00107 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCLARK_001443 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SCLARK_001444 grpE; molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D SCLARK_0071 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:scla02000]
D SCLARK_001048 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SCLARK_00163 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SCLARK_00498 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SCLARK_00739 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SCLARK_00741 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SCLARK_001621 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SCLARK_00155 Multiple sugar-binding transport ATP-binding protein MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SCLARK_00256 malK; maltodextrin ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SCLARK_00271 ABC-type transport system, ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SCLARK_00153 Maltose ABC transporter permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SCLARK_00255 Maltose ABC transporter permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SCLARK_00268 Putative polysaccharid ABC-type transport system, permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SCLARK_00229 lipoprotein (VslE) K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00244 hypothetical protein K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00729 rbsB; periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D SCLARK_00228 putative ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D SCLARK_00243 putative ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D SCLARK_00728 putative ribose ABC transporter K10440 rbsC; ribose transport system permease protein
D SCLARK_001840 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SCLARK_001837 ribose/galactose ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SCLARK_001833 ribose/galactose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SCLARK_00571 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SCLARK_00576 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SCLARK_00371 phnC; phosphonate transport system ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SCLARK_00781 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SCLARK_00773 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SCLARK_00774 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SCLARK_00377 cbiQ; cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D SCLARK_00375 cbiO2; cobalt ABC transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCLARK_00376 cbiO; cobalt ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCLARK_00453 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D SCLARK_001178 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D SCLARK_00304 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D SCLARK_00303 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D SCLARK_001395 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SCLARK_001798 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SCLARK_001179 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00317 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00319 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00379 peptide/nickel transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_001390 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_001396 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00501 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_001508 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00634 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00758 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00783 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_001745 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_001784 antibiotic transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00877 Na+ ABC transporter, ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_001659 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCLARK_00645 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SCLARK_001662 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SCLARK_001752 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SCLARK_00602 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SCLARK_001747 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D SCLARK_001819 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D SCLARK_001812 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCLARK_001200 phosphotransferase system, EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00874 ptsG2; PTS sugar transporter K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_001379 glucose-specific PTS system IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SCLARK_00181 nagE1; PTS system N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCLARK_00246 PTS system, N-acetylglucosamine-specific IIA component PTS system, N-acetylglucosamine-specific IIB component PTS system, N-acetylglucosamine-specific IIC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SCLARK_001154 PTS system, IIabc component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_001197 PTS system beta-glucoside-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_00186 scrA; PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCLARK_001149 beta-glucoside PTS system IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SCLARK_001385 beta-glucoside PTS system IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SCLARK_00894 beta-glucoside PTS system IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SCLARK_001052 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SCLARK_001713 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SCLARK_001321 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SCLARK_005 fruB2; PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SCLARK_00608 fruB1; PTS system fructose-specific IIA component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00292 fruA; PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00694 PTS system, fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCLARK_00260 mtlF; Phosphotransferase system PTS,Mannitol Permease IIA Component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001316 sgaA; PTS ascorbate transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001539 PTS system, mannitol-permease iia component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001670 PTS system, mannitol-specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCLARK_001671 PTS system, mannitol-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_00258 PTS system, mannitol-specific IIBC component, putative K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_001672 PTS system, Lactose/Cellobiose specific IIB subunit K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCLARK_00209 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_00215 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_00223 celC; PTS system cellobiose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCLARK_001108 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001183 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001213 lichenan-specific PTS system IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001357 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_00679 celC; PTS system lactose/cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001112 celA2; PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001114 celA; PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001188 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001205 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001361 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_00671 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SCLARK_001113 celB2; PTS system cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D SCLARK_001360 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SCLARK_001172 hypothetical protein K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SCLARK_001171 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D SCLARK_001174 hypothetical protein K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SCLARK_001274 PTS system, N-acetylgalactosamine-specific, IIB component K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SCLARK_001271 hypothetical protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SCLARK_001143 pentitol phosphotransferase enzyme II K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_001369 sgaA; PTS sugar transporter subunit IIAB K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_00695 PTS system enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SCLARK_001140 PTS system ascorbate-specific enzyme IIC/IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001235 PTS system, IIBC component, putative K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001315 ulaB; ascorbate-specific phosphotransferase enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001370 PTS system enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_00688 hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SCLARK_001145 putative PTS system enzyme IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001234 sgaT; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001314 PTS system ascorbate-specific enzyme IIC/IIB K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_00689 sgaT; PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SCLARK_001166 hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SCLARK_0030 glpF1; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D SCLARK_00806 glpF; Glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D SCLARK_001622 focA; formate/nitrite transporter K06212 focA; formate transporter
D SCLARK_001778 ktrB; potassium uptake protein KtrB K03498 trkH; trk/ktr system potassium uptake protein
D SCLARK_001779 ktrA; potassium uptake protein KtrA K03499 trkA; trk/ktr system potassium uptake protein
D SCLARK_00365 malate permease K24180 mleP; malate permease and related proteins
D SCLARK_001534 hypothetical protein K23675 fmnP; riboflavin transporter
D SCLARK_001204 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein
D SCLARK_001382 PQ loop repeat family K15383 K15383; MtN3 and saliva related transmembrane protein
C 02044 Secretion system [BR:scla02044]
D SCLARK_00794 comEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SCLARK_00955 DNA uptake protein K02238 comEC; competence protein ComEC
D SCLARK_00193 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCLARK_001860 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCLARK_00356 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SCLARK_001268 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SCLARK_0071 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:scla04812]
D SCLARK_0063 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_0064 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_0065 mreB5; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_001522 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_00600 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_00770 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SCLARK_00769 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SCLARK_0041 parB; site-specific DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:scla04147]
D SCLARK_001640 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCLARK_001634 pyk1; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCLARK_001443 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SCLARK_00619 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCLARK_00423 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SCLARK_00308 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SCLARK_00597 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SCLARK_001852 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCLARK_00357 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SCLARK_001074 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SCLARK_0028 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SCLARK_00330 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCLARK_001701 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:scla02048]
D SCLARK_001247 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D SCLARK_001302 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SCLARK_001339 modification methylase Sau3AI (GATC cytosine-specific methyltransferase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_001378 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCLARK_00770 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SCLARK_0063 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_0064 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_0065 mreB5; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_001522 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SCLARK_00600 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:scla01504]
D SCLARK_00601 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:scla03100]
D SCLARK_001905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCLARK_001890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCLARK_001903 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCLARK_001897 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCLARK_001910 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCLARK_001896 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SCLARK_001893 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCLARK_001898 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCLARK_001914 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCLARK_001887 tRNA-His K14226 tRNA-His; tRNA His
D SCLARK_001912 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCLARK_001915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCLARK_001895 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCLARK_001902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCLARK_001894 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCLARK_001901 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCLARK_001906 tRNA-Met K14230 tRNA-Met; tRNA Met
D SCLARK_001909 tRNA-Met K14230 tRNA-Met; tRNA Met
D SCLARK_001907 tRNA-Met K14230 tRNA-Met; tRNA Met
D SCLARK_001911 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCLARK_001904 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCLARK_001908 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCLARK_001913 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCLARK_001900 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCLARK_001891 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCLARK_001889 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SCLARK_001892 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCLARK_001899 tRNA-Val K14237 tRNA-Val; tRNA Val
D SCLARK_001888 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D SCLARK_001920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCLARK_001921 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCLARK_001919 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCLARK_001918 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCLARK_001917 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCLARK_001916 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SCLARK_001044 acpD; azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SCLARK_001466 nox; NADH oxidase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D SCLARK_001575 hypothetical protein K02217 ftnA; ferritin [EC:1.16.3.2]
D SCLARK_001398 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SCLARK_001718 tpx; thiol peroxidase K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SCLARK_001864 lgt2; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SCLARK_00542 yloV; dihydroxyacetone/glyceraldehyde kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SCLARK_001868 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SCLARK_001372 hypothetical protein K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D SCLARK_0060 primase-like protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SCLARK_001055 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SCLARK_00747 hypothetical protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D SCLARK_001262 putative unsaturated glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D SCLARK_00288 glycosyl hydrolase, family 38 K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D SCLARK_00290 glycosyl hydrolase family 38 N-terminal domain protein K15524 mngB; 2-O-(6-phospho-alpha-D-mannosyl)-D-glycerate hydrolase [EC:3.2.1.-]
D SCLARK_00516 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SCLARK_00887 putative chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SCLARK_00886 tdcF; TdcF protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SCLARK_001094 two-component regulator system yien regulator component protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SCLARK_00942 ctp2; cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SCLARK_001746 mgtA; Mg(2+) transport ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D SCLARK_001521 hypothetical protein K05337 fer; ferredoxin
D SCLARK_00605 sufU; FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D SCLARK_001496 degV; DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SCLARK_00459 ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D SCLARK_00865 hypothetical protein K07570 GSP13; general stress protein 13
D SCLARK_00618 hypothetical protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D SCLARK_001424 tig; trigger factor K03545 tig; trigger factor
D SCLARK_001857 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D SCLARK_001086 hypothetical protein K07497 K07497; putative transposase
D SCLARK_001133 putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
D SCLARK_001340 hypothetical protein K07497 K07497; putative transposase
D SCLARK_001342 Transposase K07497 K07497; putative transposase
D SCLARK_00592 Transposase K07497 K07497; putative transposase
D SCLARK_00594 putative transposase K07497 K07497; putative transposase
D SCLARK_001584 hypothetical protein K07497 K07497; putative transposase
D SCLARK_001585 Transposase K07497 K07497; putative transposase
D SCLARK_00680 Transposase K07497 K07497; putative transposase
D SCLARK_00682 hypothetical protein K07497 K07497; putative transposase
D SCLARK_00697 Transposase K07497 K07497; putative transposase
D SCLARK_00699 putative transposase K07497 K07497; putative transposase
D SCLARK_001024 putative transposase K07497 K07497; putative transposase
D SCLARK_001027 Transposase K07497 K07497; putative transposase
D SCLARK_001042 putative transposase insK for insertion sequence element IS150 K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SCLARK_001594 hypothetical protein K03972 pspE; phage shock protein E
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SCLARK_0046 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D SCLARK_001650 typA; GTP-binding protein K06207 typA; GTP-binding protein
C 99992 Structural proteins
C 99994 Others
D SCLARK_00577 phoU; phosphate transport system regulator PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SCLARK_00443 putative tRNA-binding protein K06878 K06878; tRNA-binding protein
D SCLARK_00611 LemA family protein K03744 lemA; LemA protein
C 99997 Function unknown
D SCLARK_0034 HD superfamily phosphohydrolase K06885 K06885; uncharacterized protein
D SCLARK_001827 hypothetical protein K06889 K06889; uncharacterized protein
D SCLARK_001465 proton/glutamate symporter K06956 K06956; uncharacterized protein
D SCLARK_00456 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D SCLARK_00457 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D SCLARK_00581 hypothetical protein K09787 K09787; uncharacterized protein
D SCLARK_001107 hypothetical protein K09963 K09963; uncharacterized protein
D SCLARK_001320 hypothetical protein K09963 K09963; uncharacterized protein
D SCLARK_001356 hypothetical protein K09963 K09963; uncharacterized protein
D SCLARK_001364 hypothetical protein K09963 K09963; uncharacterized protein
D SCLARK_00995 hypothetical protein K09976 K09976; uncharacterized protein
D SCLARK_001578 hypothetical protein K07584 ysxB; uncharacterized protein
D SCLARK_001684 uncharacterized protein associated with RNAses G and E K07586 ygaC; uncharacterized protein
D SCLARK_001411 ylxR; putative RNA-binding protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024