+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Styela clava (leathery sea squirt)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        120327714 DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        120331271 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        120341058 DNA-directed RNA polymerase II subunit RPB3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        120325825 DNA-directed RNA polymerase II subunit RPB11-a	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        120340570 DNA-directed RNA polymerase II subunit RPB4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        120336187 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        120338757 DNA-directed RNA polymerase II subunit RPB9-like	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        120342056 DNA-directed RNA polymerase II subunit GRINL1A-like	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        120338261 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        120340863 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        120331659 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        120331514 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        120331515 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        120327834 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        120328242 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        120332451 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        120344011 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        120345606 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        120326027 TATA-box-binding protein 2-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        120346332 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        120345554 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        120346397 transcription initiation factor TFIID subunit 3-like	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        120332770 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        120334457 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        120328012 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        120340749 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        120338522 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        120339538 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        120327835 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        120342389 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        120334100 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        120339507 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        120326838 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        120334867 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        120331643 transcription initiation factor IIE subunit beta-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        120325735 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        120340438 general transcription factor IIH subunit 1-like	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        120346221 general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        120335437 LOW QUALITY PROTEIN: general transcription factor IIH subunit 3-like	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        120325704 general transcription factor IIH subunit 3-like	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        120344963 general transcription factor IIH subunit 4-like	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        120340985 general transcription and DNA repair factor IIH helicase subunit XPB-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        120336717 general transcription and DNA repair factor IIH helicase subunit XPD-like isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        120345845 LOW QUALITY PROTEIN: cyclin-dependent kinase 7-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        120342388 CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        120339609 cyclin-H-like	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        120335237 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        120327853 mediator of RNA polymerase II transcription subunit 8-like	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        120339761 mediator of RNA polymerase II transcription subunit 8-like	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        120330716 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        120331797 mediator of RNA polymerase II transcription subunit 11-like isoform X1	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        120328913 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        120342745 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        120345526 mediator of RNA polymerase II transcription subunit 18-like	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        120346455 mediator of RNA polymerase II transcription subunit 19-B-like	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        120335492 mediator of RNA polymerase II transcription subunit 20-like	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        120341077 mediator of RNA polymerase II transcription subunit 22-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        120339540 mediator of RNA polymerase II transcription subunit 28-like isoform X1	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        120332086 mediator of RNA polymerase II transcription subunit 30-like	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        120336393 mediator of RNA polymerase II transcription subunit 1-like isoform X1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        120334262 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        120341443 mediator of RNA polymerase II transcription subunit 7-like isoform X1	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        120346054 mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        120339834 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
D      Tail
E        120328252 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        120337665 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        120327615 mediator of RNA polymerase II transcription subunit 15-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        120327645 mediator of RNA polymerase II transcription subunit 15-like	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        120334392 mediator of RNA polymerase II transcription subunit 16-like	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        120342855 cyclin-dependent kinase 8-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        120330662 cyclin-C-like	K15161 CCNC; cyclin-C 
E        120340213 mediator of RNA polymerase II transcription subunit 12-like protein isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        120330943 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        120327524 mediator of RNA polymerase II transcription subunit 23-like	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        120327525 mediator of RNA polymerase II transcription subunit 23-like	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        120342105 mediator of RNA polymerase II transcription subunit 24-like	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        120342421 mediator of RNA polymerase II transcription subunit 24-like	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        120338735 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        120334866 mediator of RNA polymerase II transcription subunit 26-like	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        120347944 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 27-like	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        120328601 LOW QUALITY PROTEIN: histone acetyltransferase KAT2A-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        120332315 transformation/transcription domain-associated protein-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        120337761 transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        120346938 transcriptional adapter 2-alpha-like	K11314 TADA2A; transcriptional adapter 2-alpha 
E        120327682 transcriptional adapter 2-beta-like	K15127 TADA2B; transcriptional adapter 2-beta 
E        120345988 transcriptional adapter 3-like	K11315 TADA3; transcriptional adapter 3 
E        120343834 transcriptional adapter 1-like	K11317 TADA1; transcriptional adapter 1 
E        120345554 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        120332770 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        120334457 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        120328012 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        120340749 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        120338522 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        120327835 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        120342389 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        120339507 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        120333611 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        120333982 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        120329669 SAGA-associated factor 29-like	K11364 SGF29; SAGA-associated factor 29 
E        120335561 uncharacterized protein LOC120335561	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        120338863 ataxin-7-like protein 1	K11318 ATXN7; ataxin-7 
E        120332419 transcription and mRNA export factor ENY2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        120331109 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        120331278 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        120332409 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        120346129 probable global transcription activator SNF2L2 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        120346447 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        120340441 SWI/SNF complex subunit SMARCC2-like isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        120338967 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        120330684 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        120348530 actin, cytoplasmic	K05692 ACTB_G1; actin beta/gamma 1 
E        120348531 actin, cytoplasmic-like isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        120348686 actin, cytoplasmic-like	K05692 ACTB_G1; actin beta/gamma 1 
E        120342224 actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        120347024 actin-like protein 6B	K11652 ACTL6B; actin-like protein 6B 
E        120338344 AT-rich interactive domain-containing protein 1A-like isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        120331925 AT-rich interactive domain-containing protein 2-like	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        120328950 protein polybromo-1-like isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        120346447 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        120347151 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        120328962 cell division cycle and apoptosis regulator protein 1-like	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        120346230 transcription elongation factor A protein 1-like	K03145 TFIIS; transcription elongation factor S-II 
E        120328368 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        120326132 transcription elongation factor SPT5-like isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        120342061 transcription elongation factor SPT6-like isoform X1	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        120326769 transcription termination factor 2-like	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        120326123 zinc finger and BTB domain-containing protein 17-like	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        120340977 pre-mRNA cleavage complex 2 protein Pcf11-like isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        120337919 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        120336359 cleavage and polyadenylation specificity factor subunit 3-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        120345862 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        120345949 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        120341398 symplekin-like	K06100 SYMPK; symplekin 
E        120328295 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        120336325 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        120330478 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        120347768 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        120337380 SR-related and CTD-associated factor 4-like	K13191 RBM16; RNA-binding protein 16 
E        120344662 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        120335583 LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        120336668 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        120344252 parafibromin-like isoform X1	K15175 CDC73; parafibromin 
E        120340831 LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        120338085 RNA polymerase-associated protein LEO1-like isoform X1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        120341485 RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        120341399 negative elongation factor A-like	K15179 WHSC2; negative elongation factor A 
E        120325996 negative elongation factor B-like isoform X1	K15180 COBRA1; negative elongation factor B 
E        120341124 negative elongation factor D-like	K15181 TH1L; negative elongation factor C/D 
E        120346478 negative elongation factor E-like	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        120330157 RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        120341549 AF4/FMR2 family member 4-like isoform X1	K15185 AFF4; AF4/FMR2 family member 4 
E        120347277 ELL-associated factor 1-like	K15186 EAF; ELL-associated factor 
E        120341917 protein AF-9-like	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        120327022 cyclin-T1-like	K15188 CCNT; cyclin T 
E        120346113 LOW QUALITY PROTEIN: cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        120330157 RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        120347383 little elongation complex subunit 2-like	K26144 ICE2; little elongation complex subunit 2 
D      Brd4/P-TEFb complex
E        120327022 cyclin-T1-like	K15188 CCNT; cyclin T 
E        120346113 LOW QUALITY PROTEIN: cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        120343203 protein HEXIM1-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        120342063 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        120325738 uncharacterized protein LOC120325738	K15191 LARP7; La-related protein 7 
E        120327022 cyclin-T1-like	K15188 CCNT; cyclin T 
E        120346113 LOW QUALITY PROTEIN: cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        120341699 LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        120344023 protein Dr1-like	K21751 DR1; down-regulator of transcription 1 
E        120343095 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        120330960 RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        120348595 CTD small phosphatase-like protein	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        120347043 LOW QUALITY PROTEIN: protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        120344049 cysteine/serine-rich nuclear protein 2-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        120325640 RNA polymerase II-associated protein 1-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        120325641 RNA polymerase II-associated protein 1-like isoform X1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        120338406 putative RNA polymerase II subunit B1 CTD phosphatase rpap2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        120327680 RNA polymerase II-associated protein 3-like	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        120340783 cyclin-K-like	K23326 CCNK; cyclin K 
E        120327719 GPN-loop GTPase 2-like	K24104 GPN; GPN-loop GTPase 
E        120335888 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
E        120336703 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        120340734 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        120327664 DNA-directed RNA polymerase III subunit RPC1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        120331050 DNA-directed RNA polymerase III subunit RPC2-like	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        120341198 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        120330421 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        120342722 DNA-directed RNA polymerase III subunit RPC3-like	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        120331741 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        120347305 DNA-directed RNA polymerase III subunit RPC5-like	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        120335279 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        120340834 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        120331772 DNA-directed RNA polymerase III subunit RPC9-like	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        120337506 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        120338261 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        120340863 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        120331659 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        120331514 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        120331515 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
C    Basal transcription factors
D      TFIIIA
E        120326354 gastrula zinc finger protein XlCGF17.1-like	K09191 GTF3A; general transcription factor IIIA 
E        120326863 zinc finger protein 239-like	K09191 GTF3A; general transcription factor IIIA 
E        120344101 zinc finger protein 100-like	K09191 GTF3A; general transcription factor IIIA 
E        120327945 oocyte zinc finger protein XlCOF19-like	K09191 GTF3A; general transcription factor IIIA 
E        120328554 zinc finger protein 121-like	K09191 GTF3A; general transcription factor IIIA 
E        120338022 zinc finger protein 25-like	K09191 GTF3A; general transcription factor IIIA 
E        120329564 zinc finger protein 675-like	K09191 GTF3A; general transcription factor IIIA 
E        120330394 zinc finger protein 239-like	K09191 GTF3A; general transcription factor IIIA 
E        120330565 zinc finger protein 626-like	K09191 GTF3A; general transcription factor IIIA 
E        120339225 zinc finger protein 626-like	K09191 GTF3A; general transcription factor IIIA 
E        120339356 gastrula zinc finger protein XlCGF67.1-like	K09191 GTF3A; general transcription factor IIIA 
E        120339909 zinc finger protein 239-like	K09191 GTF3A; general transcription factor IIIA 
E        120340039 LOW QUALITY PROTEIN: gastrula zinc finger protein XlCGF71.1-like	K09191 GTF3A; general transcription factor IIIA 
E        120348285 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
E        120340233 zinc finger protein 235-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        120340319 zinc finger protein 676-like	K09191 GTF3A; general transcription factor IIIA 
E        120340391 zinc finger protein 525-like	K09191 GTF3A; general transcription factor IIIA 
E        120340393 zinc finger protein 708-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        120345606 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        120326027 TATA-box-binding protein 2-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        120326333 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        120331206 transcription factor IIIB 50 kDa subunit-like isoform X1	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
E        120335471 transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        120333225 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 1-like	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        120344156 general transcription factor 3C polypeptide 2-like	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        120338323 uncharacterized protein LOC120338323	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        120337400 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        120337146 uncharacterized protein LOC120337146	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        120325452 uncharacterized protein LOC120325452	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        120348621 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        120331565 uncharacterized protein LOC120331565	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        120348621 LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        120337400 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        120345363 snRNA-activating protein complex subunit 3-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        120345364 snRNA-activating protein complex subunit 3-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        120346759 uncharacterized protein LOC120346759	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
E        120332628 uncharacterized protein LOC120332628	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
D      Octamer transcription factors
E        120325711 POU domain, class 2, transcription factor 1-like	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        120338860 zinc finger protein 76-like isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        120334096 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        120344288 DNA-directed RNA polymerase I subunit RPA1-like	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        120329633 DNA-directed RNA polymerase I subunit RPA2-like	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        120341198 DNA-directed RNA polymerases I and III subunit RPAC1-like	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        120330421 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        120339415 DNA-directed RNA polymerase I subunit RPA49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        120339748 DNA-directed RNA polymerase I subunit RPA49-like isoform X1	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        120327920 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        120338261 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        120340863 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        120331659 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        120331514 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        120331515 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
C    Basal transcription factors
D      SL1/TIF-1B
E        120345606 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        120326027 TATA-box-binding protein 2-like isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        120326405 TATA box-binding protein-associated factor RNA polymerase I subunit B-like	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        120343183 uncharacterized protein LOC120343183 isoform X1	K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C 
C    Other transcription-related factors
D      UBF
E        120331177 nucleolar transcription factor 1-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        120337220 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        120328368 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        120326132 transcription elongation factor SPT5-like isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        120347053 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        120347416 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        120344011 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        120334867 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#Last updated: April 9, 2024