+F Repair protein KO #

  DNA Repair and Recombination Proteins - Styela clava (leathery sea squirt)

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D 120347039 methylated-DNA--protein-cysteine methyltransferase-like K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D 120347040 methylated-DNA--protein-cysteine methyltransferase-like K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D 120342931 DNA oxidative demethylase ALKBH2-like K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33] D 120346919 activating signal cointegrator 1 complex subunit 3-like K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4] C BER (base exicision repair) D DNA glycosylases E 120326346 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E 120326600 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E 120341948 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E 120338754 uncharacterized protein LOC120338754 isoform X1 K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29] E 120342005 single-strand selective monofunctional uracil DNA glycosylase-like K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] E 120338819 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E 120342821 LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 4-like K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-] E 120329574 N-glycosylase/DNA lyase-like K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E 120332340 endonuclease III-like protein 1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E 120326733 probable endonuclease 4 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E 120326734 probable endonuclease 4 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E 120328685 exodeoxyribonuclease-like K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] E 120330647 DNA-(apurinic or apyrimidinic site) endonuclease 2-like K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F 120342368 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F 120338244 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2 F 120329754 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3 F 120348540 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3 F 120345879 DNA polymerase delta subunit 4-like isoform X1 K03505 POLD4; DNA polymerase delta subunit 4 F 120342175 DNA polymerase delta subunit 4-like isoform X1 K03505 POLD4; DNA polymerase delta subunit 4 E DNA polymerase epsilon complex F 120345189 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F 120327029 DNA polymerase epsilon subunit 2-like K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F 120335391 DNA polymerase epsilon subunit 3-like K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7] F 120345000 DNA polymerase epsilon subunit 4-like K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7] E 120332412 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen E 120329436 LOW QUALITY PROTEIN: flap endonuclease 1-like K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E 120332285 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors E 120336563 DNA polymerase beta-like K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] E 120340888 DNA repair protein XRCC1-like K10803 XRCC1; DNA-repair protein XRCC1 E 120334470 putative short transient receptor potential channel 2-like protein K10803 XRCC1; DNA-repair protein XRCC1 E 120328278 DNA ligase 3-like isoform X1 K10776 LIG3; DNA ligase 3 [EC:6.5.1.1] D Other BER factors E 120340594 tyrosyl-DNA phosphodiesterase 1-like K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] E 120333816 aprataxin-like isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E 120332486 aprataxin and PNK-like factor isoform X1 K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-] E 120338756 bifunctional polynucleotide phosphatase/kinase-like K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] E 120335599 poly [ADP-ribose] polymerase 1-like K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30] E 120344681 protein mono-ADP-ribosyltransferase PARP4-like isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] E 120344738 poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] E 120329631 poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F 120338733 DNA repair protein complementing XP-C cells homolog isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein F 120336346 UV excision repair protein RAD23 homolog B-like K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F 120342351 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F 120334197 cullin-4B-like K10609 CUL4; cullin 4 F 120347159 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1 E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F 120327714 DNA-directed RNA polymerase II subunit RPB1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F 120331271 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F 120341058 DNA-directed RNA polymerase II subunit RPB3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F 120340570 DNA-directed RNA polymerase II subunit RPB4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 F 120338261 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F 120340863 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 F 120336187 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 F 120331659 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F 120338757 DNA-directed RNA polymerase II subunit RPB9-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F 120325825 DNA-directed RNA polymerase II subunit RPB11-a K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 F 120331514 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 F 120331515 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 E Cul4-CSA complex F 120342351 RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F 120334197 cullin-4B-like K10609 CUL4; cullin 4 F 120347159 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1 F 120347388 DNA excision repair protein ERCC-8-like K10570 ERCC8; DNA excision repair protein ERCC-8 E Other TCR factor F 120337906 DNA excision repair protein ERCC-6-like isoform X1 K10841 ERCC6; DNA excision repair protein ERCC-6 F 120343300 UV-stimulated scaffold protein A-like K23720 UVSSA; UV-stimulated scaffold protein A F 120334868 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1 D TFIIH complex E 120340985 general transcription and DNA repair factor IIH helicase subunit XPB-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E 120336717 general transcription and DNA repair factor IIH helicase subunit XPD-like isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E 120340438 general transcription factor IIH subunit 1-like K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 E 120346221 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E 120335437 LOW QUALITY PROTEIN: general transcription factor IIH subunit 3-like K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E 120325704 general transcription factor IIH subunit 3-like K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E 120344963 general transcription factor IIH subunit 4-like K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E 120345845 LOW QUALITY PROTEIN: cyclin-dependent kinase 7-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E 120339609 cyclin-H-like K06634 CCNH; cyclin H E 120342388 CDK-activating kinase assembly factor MAT1-like K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D RPA (replication factor A) E 120346405 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1 E 120334879 replication protein A 32 kDa subunit-A-like K10739 RFA2; replication factor A2 E 120330187 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3 D Other NER factors E 120327677 DNA repair protein complementing XP-A cells-like K10847 XPA; DNA-repair protein complementing XP-A cells E 120347213 DNA excision repair protein ERCC-1-like K10849 ERCC1; DNA excision repair protein ERCC-1 E 120329988 DNA repair endonuclease XPF-like K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E 120328001 DNA repair protein complementing XP-G cells homolog isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5 E 120332285 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E 120332421 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19 E 120327890 cullin-3-A-like isoform X1 K03869 CUL3; cullin 3 E 120344206 cullin-5-like K10612 CUL5; cullin 5 E 120327106 elongin-C K03872 ELOC; elongin-C E 120340382 elongin-C-like K03872 ELOC; elongin-C E 120346724 elongin-B-like K03873 ELOB; elongin-B C MMR (mismatch excision repair) D Mismatch and loop recognition factors E 120326151 DNA mismatch repair protein Msh2-like K08735 MSH2; DNA mismatch repair protein MSH2 E 120336782 DNA mismatch repair protein Msh6-like K08737 MSH6; DNA mismatch repair protein MSH6 E 120341630 uncharacterized protein LOC120341630 K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E 120342822 PMS1 protein homolog 1-like isoform X1 K10864 PMS1; DNA mismatch repair protein PMS1 E 120346937 DNA mismatch repair protein Mlh1-like K08734 MLH1; DNA mismatch repair protein MLH1 E 120340950 mismatch repair endonuclease PMS2-like K10858 PMS2; DNA mismatch repair protein PMS2 E 120326763 DNA mismatch repair protein Mlh3-like K08739 MLH3; DNA mismatch repair protein MLH3 D DNA polymerase delta complex E 120342368 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E 120338244 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2 E 120329754 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3 E 120348540 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3 E 120345879 DNA polymerase delta subunit 4-like isoform X1 K03505 POLD4; DNA polymerase delta subunit 4 E 120342175 DNA polymerase delta subunit 4-like isoform X1 K03505 POLD4; DNA polymerase delta subunit 4 D RPA (replication factor A) E 120346405 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1 E 120334879 replication protein A 32 kDa subunit-A-like K10739 RFA2; replication factor A2 E 120330187 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3 D RFC (replication factor C) E 120332312 replication factor C subunit 1-like K10754 RFC1; replication factor C subunit 1 E 120342454 LOW QUALITY PROTEIN: replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4 E 120334583 LOW QUALITY PROTEIN: replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4 E 120336811 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5 E 120345018 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E 120332412 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen E 120329229 exonuclease 1-like isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-] E 120332285 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E 120336342 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76 B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E 120331208 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11 E 120328024 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] E 120331120 nibrin-like K10867 NBN; nibrin E 120331450 nibrin-like K10867 NBN; nibrin D BRCA1-core complex E 120333263 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1 D BRCA1-A complex E 120328967 uncharacterized protein LOC120328967 K20774 FAM175A; BRCA1-A complex subunit Abraxas E 120328968 uncharacterized protein LOC120328968 K20774 FAM175A; BRCA1-A complex subunit Abraxas E 120330352 BRISC and BRCA1-A complex member 1-like K20776 BABAM; BRISC and BRCA1-A complex member 1 E 120330896 BRISC and BRCA1-A complex member 2-like K12173 BRE; BRCA1-A complex subunit BRE E 120327651 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-] D BRCA1-B complex E 120346345 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3] E 120345599 DNA topoisomerase 2-binding protein 1-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1 D BRCA1-C complex E 120336298 DNA endonuclease RBBP8-like K20773 RBBP8; DNA endonuclease RBBP8 [EC:3.1.-.-] E 120331208 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11 E 120328024 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] E 120331120 nibrin-like K10867 NBN; nibrin E 120331450 nibrin-like K10867 NBN; nibrin D BRCA complex E 120333870 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51 D RecA family proteins E 120333870 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51 E 120337244 DNA repair protein RAD51 homolog 3-like K10870 RAD51L2; RAD51-like protein 2 E 120327829 DNA repair protein RAD51 homolog 4-like K10871 RAD51L3; RAD51-like protein 3 E 120327857 DNA repair protein RAD51 homolog 4-like isoform X1 K10871 RAD51L3; RAD51-like protein 3 E 120328164 DNA repair protein XRCC2-like K10879 XRCC2; DNA-repair protein XRCC2 D Rad52 family proteins D Rad54 family proteins E 120336716 DNA repair and recombination protein RAD54-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] E 120340107 LOW QUALITY PROTEIN: helicase ARIP4-like K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-] D RecQ family DNA helicases E 120328546 ATP-dependent DNA helicase Q1-like isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4] E 120336394 Werner syndrome ATP-dependent helicase-like K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4] E 120347858 Werner syndrome ATP-dependent helicase-like K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4] E 120340741 ATP-dependent DNA helicase Q4-like K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4] E 120332159 ATP-dependent DNA helicase Q5-like K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4] E 120332328 ATP-dependent DNA helicase Q5-like K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4] D Bloom's syndrome complex (BTR) E 120326759 LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E 120345295 DNA topoisomerase 3-beta-1-like isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E 120339823 recQ-mediated genome instability protein 1-like K10990 RMI1; RecQ-mediated genome instability protein 1 D RPA (replication factor A) E 120346405 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1 E 120334879 replication protein A 32 kDa subunit-A-like K10739 RFA2; replication factor A2 E 120330187 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3 D Protein phosphatase 4 E 120332278 serine/threonine-protein phosphatase 4 catalytic subunit K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E 120333152 serine/threonine-protein phosphatase 4 catalytic subunit K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E 120346633 serine/threonine-protein phosphatase 4 regulatory subunit 1-like K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1 E 120339798 serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like isoform X1 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2 E 120340216 serine/threonine-protein phosphatase 4 regulatory subunit 3A-like K17491 SMEK; protein phosphatase 4 regulatory subunit 3 E 120329460 serine/threonine-protein phosphatase 4 regulatory subunit 4-like K15426 PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4 D AP-5 complex D SMC5-SMC6 complex E 120334934 structural maintenance of chromosomes protein 5-like K22803 SMC5; structural maintenance of chromosomes protein 5 E 120339339 structural maintenance of chromosomes protein 6-like isoform X1 K22804 SMC6; structural maintenance of chromosomes protein 6 E 120336817 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27] E 120330635 E3 SUMO-protein ligase NSE2-like K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] E 120346002 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4 E 120331865 uncharacterized protein LOC120331865 isoform X1 K26126 SLF1; SMC5-SMC6 complex localization factor protein 1 D Other HR factors E 120327618 crossover junction endonuclease EME1-like isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-] E 120327619 crossover junction endonuclease EME1-like isoform X1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-] E 120331712 exonuclease 3'-5' domain-containing protein 2-like isoform X1 K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1] E 120338006 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] E 120340720 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] E 120347608 26S proteasome complex subunit SEM1-like K10881 SHFM1; 26 proteasome complex subunit DSS1 E 120337666 uncharacterized protein LOC120337666 K10992 SFR1; Swi5-dependent recombination DNA repair protein 1 E 120346330 structure-specific endonuclease subunit slx1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] E 120339147 uncharacterized protein LOC120339147 K10484 BTBD12; structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12) E 120345749 LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1-like K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-] E 120347078 DNA ligase 1-like K20778 RAD51AP1; RAD51-associated protein 1 E 120345544 mortality factor 4-like protein 1 K11339 MORF4L1; mortality factor 4-like protein 1 E 120344491 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120338820 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120338821 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120339982 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120334199 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120334334 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120334369 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120334558 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120334559 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120334561 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120334562 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] E 120332417 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] E 120343937 uncharacterized protein LOC120343937 K22806 SPIDR; DNA repair-scaffolding protein E 120334696 protein LRATD2-like K22810 FAM84B; protein FAM84B E 120334051 protein LRATD2-like K22810 FAM84B; protein FAM84B E 120343079 uncharacterized protein LOC120343079 K23112 BRAT1; BRCA1-associated ATM activator 1 E 120342378 cilia- and flagella-associated protein 410-like K23456 CFAP410; cilla- and flagella-associated protein E 120332754 hepatoma-derived growth factor-related protein 2-like K25065 HDGFL2; hepatoma-derived growth factor-related protein 2 E 120325679 zinc finger SWIM domain-containing protein 7-like isoform X1 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7 E 120340341 uncharacterized protein LOC120340341 isoform X1 K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY E 120336926 protein MMS22-like K26125 MMS22L; protein MMS22-like E 120332270 tonsoku-like protein K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2 C NHEJ (non-homologous end-joining) D DNA-PK complex E 120332310 X-ray repair cross-complementing protein 5-like K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1 E 120325708 X-ray repair cross-complementing protein 5-like K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2 E 120340358 DNA-dependent protein kinase catalytic subunit-like K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1] D MRX complex E 120331208 double-strand break repair protein MRE11-like K10865 MRE11; double-strand break repair protein MRE11 E 120328024 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D DNA Ligase 4 complex E 120345462 DNA ligase 4-like K10777 LIG4; DNA ligase 4 [EC:6.5.1.1] E 120326077 DNA repair protein XRCC4-like K10886 XRCC4; DNA-repair protein XRCC4 E 120327922 non-homologous end-joining factor 1-like K10980 NHEJ1; non-homologous end-joining factor 1 D X-family DNA polymerases E 120340205 DNA-directed DNA/RNA polymerase mu-like isoform X1 K03513 POLM; DNA polymerase mu [EC:2.7.7.7] E 120336563 DNA polymerase beta-like K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-] D Other NHEJ factors E 120333816 aprataxin-like isoform X1 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] E 120332486 aprataxin and PNK-like factor isoform X1 K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-] E 120327778 protein artemis-like isoform X1 K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-] E 120327214 tyrosyl-DNA phosphodiesterase 2-like K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] E 120327229 tyrosyl-DNA phosphodiesterase 2-like K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-] E 120330735 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1 E 120335433 jmjC domain-containing protein 8-like K25792 JMJD8; jumonji domain-containing protein 8 C FA (Fanconi anemia) pathway D FA core complex E 120345125 uncharacterized protein LOC120345125 isoform X1 K10888 FANCA; fanconi anemia group A protein E 120335248 E3 ubiquitin-protein ligase FANCL-like isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27] E 120336270 E3 ubiquitin-protein ligase FANCL-like K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27] E 120330877 Fanconi anemia group M protein-like isoform X1 K10896 FANCM; fanconi anemia group M protein E 120332575 Fanconi anemia core complex-associated protein 24-like K10898 FAAP24; fanconi anemia-associated protein D FA core complex binding factors E 120328154 uncharacterized protein LOC120328154 K06054 HES1; hairy and enhancer of split 1 E 120328854 enhancer of split mbeta protein-like K06054 HES1; hairy and enhancer of split 1 E 120328302 ubiquitin-conjugating enzyme E2 T-like K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23] D Bloom's syndrome complex (BTR) E 120326759 LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E 120345295 DNA topoisomerase 3-beta-1-like isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] E 120339823 recQ-mediated genome instability protein 1-like K10990 RMI1; RecQ-mediated genome instability protein 1 D FANCD2-I complex E 120333124 Fanconi anemia group D2 protein-like K10891 FANCD2; fanconi anemia group D2 protein E 120339473 Fanconi anemia group I protein-like isoform X1 K10895 FANCI; fanconi anemia group I protein D Downstream FA components E 120346345 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3] D Other FA pathway factors E 120330275 fanconi-associated nuclease 1-like isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] E 120333870 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51 E 120337244 DNA repair protein RAD51 homolog 3-like K10870 RAD51L2; RAD51-like protein 2 E 120332296 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein E 120335652 ubiquitin carboxyl-terminal hydrolase 1-like K11832 USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12] E 120327278 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48 C Other DSBR factors D Protein phosphatase 6 E 120337225 serine/threonine-protein phosphatase 6 catalytic subunit K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16] E 120330704 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3 E 120330744 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3 E 120341674 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like K15502 ANKRD28; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A D Ubiquitin ligases E 120327195 E3 ubiquitin-protein ligase RNF8-like K10667 RNF8; E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27] E 120346354 E3 ubiquitin-protein ligase rnf168-like K20779 RNF168; E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31] E 120333382 E3 ubiquitin-protein ligase HERC2-like isoform X1 K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26] D Others E 120333623 telomerase Cajal body protein 1-like K23314 WRAP53; telomerase Cajal body protein 1 E 120343006 zinc finger CW-type PWWP domain protein 1-like isoform X1 K24688 ZCWPW1; zinc finger CW-type PWWP domain protein 1 E 120338252 WD repeat-containing protein 70-like K24752 WDR70; WD repeat-containing protein 70 E 120336342 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D 120332163 DNA polymerase eta-like K03509 POLH; DNA polymerase eta [EC:2.7.7.7] D 120344846 DNA repair protein REV1-like K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases D 120341041 LOW QUALITY PROTEIN: uncharacterized protein LOC120341041 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7] C A-family DNA polymerase C Rad6 epistasis group D 120337107 ubiquitin-conjugating enzyme E2 A-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D 120337108 ubiquitin-conjugating enzyme E2 A K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D 120336880 ubiquitin-conjugating enzyme E2 variant 2-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D 120339423 ubiquitin-conjugating enzyme E2 N-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D 120332412 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D 120336638 DNA-dependent metalloprotease SPRTN-like K24051 SPRTN; SprT-like domain-contaning protein Spartan D 120336662 DNA-dependent metalloprotease SPRTN-like K24051 SPRTN; SprT-like domain-contaning protein Spartan D 120332162 acidic repeat-containing protein-like K26957 GCNA; germ cell nuclear acidic protein B Check point factors C Rad9-Hus1-Rad1 complex D 120342104 cell cycle checkpoint control protein RAD9A-like K10995 RAD9B; cell cycle checkpoint control protein RAD9B D 120326424 checkpoint protein HUS1-like K10903 HUS1; HUS1 checkpoint protein D 120338964 cell cycle checkpoint protein RAD1-like K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C HRAD17(Rad24)-RFC complex D 120333800 cell cycle checkpoint protein RAD17-like K06662 HRAD17; cell cycle checkpoint protein D 120342454 LOW QUALITY PROTEIN: replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4 D 120334583 LOW QUALITY PROTEIN: replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4 D 120336811 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5 D 120345018 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex D 120338964 cell cycle checkpoint protein RAD1-like K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2] C FPC (fork protection complex) D 120343127 protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1 D 120342040 TIMELESS-interacting protein-like K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3 D 120332404 claspin-like K25773 CLSPN; claspin C Triple T complex D 120332296 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein D 120340722 TELO2-interacting protein 1 homolog K20403 TTI1; TELO2-interacting protein 1 C BAG6-UBL4A-GET4 complex D 120348646 large proline-rich protein BAG6-like K23390 BAG6; large proline-rich protein BAG6 D 120337908 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D 120347281 serine/threonine-protein kinase atr-like isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] D 120328126 uncharacterized protein LOC120328126 isoform X1 K10905 ATRIP; ATR interacting protein D 120332130 LOW QUALITY PROTEIN: serine-protein kinase ATM-like K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] D 120327827 serine/threonine-protein kinase Chk1-like K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D 120327855 serine/threonine-protein kinase Chk1-like K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] D 120342829 serine/threonine-protein kinase Chk2-like K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] D 120335308 LOW QUALITY PROTEIN: M-phase inducer phosphatase 3-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48] D 120331652 14-3-3 protein gamma-like K16198 YWHAG_H; 14-3-3 protein gamma/eta D 120335532 14-3-3 protein epsilon-like K06630 YWHAE; 14-3-3 protein epsilon D 120335566 14-3-3-like protein GF14 psi K06630 YWHAE; 14-3-3 protein epsilon D 120345353 14-3-3 family protein artA-like K06630 YWHAE; 14-3-3 protein epsilon D 120346723 14-3-3 family protein artA-like K06630 YWHAE; 14-3-3 protein epsilon D 120330171 14-3-3 protein epsilon-like K06630 YWHAE; 14-3-3 protein epsilon D 120340861 14-3-3 protein zeta-like K06630 YWHAE; 14-3-3 protein epsilon D 120344180 neuron navigator 3-like isoform X1 K19483 NAV2; neuron navigator 2 [EC:5.6.2.4] D 120331629 LOW QUALITY PROTEIN: wee1-like protein kinase 1-A K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1] D 120331784 wee1-like protein kinase 1-A K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1] D 120332153 mediator of DNA damage checkpoint protein 1-like isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1 D 120327652 plastin-2-like K17336 PLS3; plastin-3 D 120332650 RNA exonuclease 4-like K18340 AEN; apoptosis-enhancing nuclease [EC:3.1.-.-] D 120339026 serine/threonine-protein kinase Nek4-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1] D 120341108 serine/threonine-protein kinase Nek1-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1] D 120338739 serine/threonine-protein kinase Nek10-like K20879 NEK10; serine/threonine-protein kinase Nek10 [EC:2.7.11.1] D 120328695 serine/threonine-protein kinase Nek11-like K20880 NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1] D 120334872 LOW QUALITY PROTEIN: protein downstream neighbor of Son-like K22422 DONSON; protein downstream neighbor of Son D 120345576 KN motif and ankyrin repeat domain-containing protein 3-like isoform X1 K22808 KANK; KN motif and ankyrin repeat domain-containing protein D 120339099 vacuolar protein sorting-associated protein 4B-like K12196 VPS4; vacuolar protein-sorting-associated protein 4 D 120347186 vacuolar protein sorting-associated protein 4-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4 D 120330622 abscission/NoCut checkpoint regulator-like K24778 ZFYVE19; abscission/NoCut checkpoint regulator D 120331233 abscission/NoCut checkpoint regulator-like isoform X1 K24778 ZFYVE19; abscission/NoCut checkpoint regulator D 120331458 abscission/NoCut checkpoint regulator-like K24778 ZFYVE19; abscission/NoCut checkpoint regulator D 120344805 replication stress response regulator SDE2-like K25059 SDE2; replication stress response regulator SDE2 B Other factors with a suspected DNA repair function C DNA polymerases D 120345594 DNA polymerase theta-like K02349 POLQ; DNA polymerase theta [EC:2.7.7.7] D 120345763 myb-binding protein 1A-like protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7] D 120347022 DNA-directed primase/polymerase protein-like K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7] D 120347025 DNA-directed primase/polymerase protein-like K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7] C Nucleases D 120339051 three-prime repair exonuclease 1-like K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2] D 120339212 three-prime repair exonuclease 1-like K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2] D 120333709 uncharacterized protein LOC120333709 K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2] D 120325883 three-prime repair exonuclease 1-like K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2] D 120326788 5' exonuclease Apollo-like K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-] D 120334326 uncharacterized protein LOC120334326 K21411 ANKLE1; ankyrin repeat and LEM domain-containing protein 1 C Helicases D 120338859 helicase POLQ-like K19178 HELQ; POLQ-like helicase [EC:5.6.2.4] C PSO4 complex D 120343042 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D 120342473 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D 120340187 pre-mRNA-splicing factor SPF27-like K12861 BCAS2; pre-mRNA-splicing factor SPF27 D 120341299 pleiotropic regulator 1-like K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D 120339028 7,8-dihydro-8-oxoguanine triphosphatase-like K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56] D 120339050 8-oxo-dGDP phosphatase NUDT18-like K17817 NUDT18; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D 120333456 deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D 120340964 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D 120329712 ribonucleoside-diphosphate reductase subunit M2 B-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D 120348609 ribonucleoside-diphosphate reductase subunit M2 B-like isoform X1 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D 120347039 methylated-DNA--protein-cysteine methyltransferase-like K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D 120347040 methylated-DNA--protein-cysteine methyltransferase-like K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] C BER (base exicision repair) D DNA glycosylases E 120326346 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E 120326600 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E 120341948 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E 120342005 single-strand selective monofunctional uracil DNA glycosylase-like K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-] E 120338819 adenine DNA glycosylase-like K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E 120332340 endonuclease III-like protein 1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D 120333456 deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024