+D GENES KO
#
KEGG Orthology (KO) - Streptococcus parasanguinis ATCC 15912
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:scp00010]
D HMPREF0833_10583 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0833_11340 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0833_10702 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HMPREF0833_11893 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0833_10858 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF0833_11265 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0833_11263 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0833_11895 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10093 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0833_10250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0833_10705 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HMPREF0833_10514 acoA; TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF0833_10513 acoB; TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF0833_10512 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_10119 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_10440 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_11529 adh; aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0833_11960 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF0833_11523 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF0833_10457 pgcA; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0833_11192 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0833_10339 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0833_11731 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:scp00020]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_10514 acoA; TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF0833_10513 acoB; TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF0833_10512 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:scp00030]
D HMPREF0833_11340 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0833_10895 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF0833_10833 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D HMPREF0833_11058 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF0833_11274 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0833_11717 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HMPREF0833_10405 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF0833_11145 xfp; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D HMPREF0833_10657 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HMPREF0833_10406 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HMPREF0833_10457 pgcA; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0833_11495 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0833_10449 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0833_11893 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0833_10702 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:scp00040]
D HMPREF0833_11330 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0833_11274 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0833_10565 Rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D HMPREF0833_10563 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
C 00051 Fructose and mannose metabolism [PATH:scp00051]
D HMPREF0833_11117 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF0833_11108 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0833_10564 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D HMPREF0833_10565 Rhamnulokinase family protein K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D HMPREF0833_10563 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0833_10702 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HMPREF0833_10591 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HMPREF0833_11893 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0833_10858 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF0833_10590 putative PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF0833_11521 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF0833_11959 putative PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF0833_11681 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11519 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11958 manY; mannose permease IIC component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11520 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D HMPREF0833_11957 putative mannose permease IID component K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:scp00052]
D HMPREF0833_11523 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF0833_10742 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0833_10740 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF0833_10286 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0833_10739 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0833_11330 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0833_10457 pgcA; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0833_10583 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0833_11360 Gram-positive signal peptide protein, YSIRK family K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF0833_11517 putative beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D HMPREF0833_10744 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF0833_10749 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF0833_10692 lacC; tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0833_10691 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D HMPREF0833_10693 lacB; galactose-6-phosphate isomerase, LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D HMPREF0833_10694 lacA; galactose-6-phosphate isomerase, LacA subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D HMPREF0833_10687 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D HMPREF0833_10689 lacF; lactose-specific phosphotransferase enzyme IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF0833_10688 PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF0833_11119 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF0833_10077 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF0833_11798 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D HMPREF0833_11679 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HMPREF0833_11522 sugar isomerase, AgaS family K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:scp00500]
D HMPREF0833_11118 PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF0833_11119 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF0833_10077 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF0833_10343 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D HMPREF0833_10745 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D HMPREF0833_11330 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0833_10342 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_11713 putative N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_10340 licB; lichenan-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_11714 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_10341 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_10124 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_11715 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_11192 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0833_10339 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0833_11731 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF0833_10204 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF0833_10205 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF0833_10206 glgA; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D HMPREF0833_10203 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF0833_11417 glgP; phosphorylase, glycogen/starch/alpha-glucan family K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HMPREF0833_10322 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF0833_11424 pulA; pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF0833_10727 cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D HMPREF0833_10367 bbmA; intracellular maltogenic amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D HMPREF0833_11798 alpha amylase, catalytic domain protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D HMPREF0833_11418 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF0833_10572 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D HMPREF0833_11056 PTS system IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D HMPREF0833_11055 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D HMPREF0833_10981 treP; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HMPREF0833_10980 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D HMPREF0833_10457 pgcA; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0833_10583 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0833_11340 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0833_11117 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:scp00520]
D HMPREF0833_10569 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0833_10743 beta-hexosaminidase A family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0833_11884 Gram-positive signal peptide protein, YSIRK family K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0833_11630 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0833_11979 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HMPREF0833_10188 putative glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF0833_11117 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF0833_11732 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF0833_10232 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HMPREF0833_10145 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0833_10217 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0833_10311 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0833_10715 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0833_11535 nanE; N-acetylmannosamine-6-P epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HMPREF0833_11541 putative N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D HMPREF0833_11650 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0833_11377 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0833_10583 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0833_10457 pgcA; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0833_11330 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0833_10742 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0833_10740 galT; UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF0833_10286 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0833_10739 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0833_11521 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF0833_11959 putative PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF0833_11681 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11519 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11958 manY; mannose permease IIC component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11520 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D HMPREF0833_11957 putative mannose permease IID component K02796 manZ; mannose PTS system EIID component
D HMPREF0833_11340 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0833_11108 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0833_10204 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF0833_10205 glgD; glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:scp00620]
D HMPREF0833_10514 acoA; TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF0833_10513 acoB; TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF0833_10512 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_11223 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF0833_11529 adh; aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0833_11960 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF0833_11663 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF0833_10454 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0833_10250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0833_11954 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_11950 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF0833_11952 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF0833_11953 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_11039 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HMPREF0833_11194 spxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D HMPREF0833_10119 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_10440 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_10282 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HMPREF0833_10846 metallo-beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HMPREF0833_10079 putative NAD-dependent malic enzyme 3 K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D HMPREF0833_10860 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF0833_10705 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HMPREF0833_10427 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:scp00630]
D HMPREF0833_11455 HAD hydrolase, family IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HMPREF0833_11345 HAD hydrolase, family IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HMPREF0833_11260 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0833_10492 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_10837 putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:scp00640]
D HMPREF0833_11663 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF0833_10454 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_11223 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF0833_11954 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_11950 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF0833_11952 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF0833_11953 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_10119 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_10440 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_11718 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:scp00650]
D HMPREF0833_11529 adh; aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0833_11223 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF0833_11226 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D HMPREF0833_11533 GroES-like protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D HMPREF0833_11916 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF0833_11917 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF0833_10830 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D HMPREF0833_11089 putative chlorophyll synthesis pathway protein BchC K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D HMPREF0833_10382 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:scp00660]
D HMPREF0833_11916 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF0833_11917 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF0833_10830 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D HMPREF0833_10430 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF0833_10431 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF0833_10428 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:scp00562]
D HMPREF0833_10265 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF0833_10858 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:scp00190]
D HMPREF0833_10212 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF0833_10214 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF0833_10213 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF0833_10211 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF0833_10215 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF0833_10209 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF0833_10210 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF0833_10208 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF0833_11551 ATP synthase ab domain protein K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D HMPREF0833_11552 ATP synthase ab domain protein K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D HMPREF0833_11548 ATP synthase, subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D HMPREF0833_11553 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D HMPREF0833_11547 ntpE; V-type sodium ATP synthase, subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D HMPREF0833_11549 ATP synthase, subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D HMPREF0833_11544 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D HMPREF0833_11545 V-type sodium ATPase, I subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D HMPREF0833_11546 V-type sodium ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D HMPREF0833_10977 ppaC; inorganic diphosphatase PpaC K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:scp00710]
D HMPREF0833_11263 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0833_11265 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0833_11893 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0833_10702 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HMPREF0833_10405 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF0833_10858 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF0833_11274 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF0833_11717 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D HMPREF0833_10860 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF0833_10705 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:scp00720]
D HMPREF0833_10705 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D HMPREF0833_10860 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF0833_11954 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_11950 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF0833_11952 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF0833_11953 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_10461 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF0833_11151 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF0833_10074 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF0833_11150 fchA; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D HMPREF0833_11157 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HMPREF0833_10454 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0833_11663 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:scp00680]
D HMPREF0833_10492 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0833_10835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0833_10860 ppc; phosphoenolpyruvate carboxykinase (GTP) K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF0833_11893 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF0833_10702 firmicute fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0833_11663 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF0833_10454 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0833_11895 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10093 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10838 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:scp00910]
D HMPREF0833_11210 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF0833_11260 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0833_10183 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HMPREF0833_11316 cah; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:scp00920]
D HMPREF0833_10385 DHHA1 domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D HMPREF0833_11791 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF0833_10001 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HMPREF0833_10786 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HMPREF0833_10972 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:scp00061]
D HMPREF0833_11954 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_11950 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF0833_11952 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF0833_11953 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF0833_11502 putative acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF0833_11945 putative acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF0833_11947 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF0833_10502 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF0833_11944 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF0833_11949 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF0833_10136 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0833_11948 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0833_11951 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HMPREF0833_11946 putative enoyl-[acyl-carrier-protein] reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HMPREF0833_11942 enoyl-CoA hydratase/isomerase family protein K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D HMPREF0833_11529 adh; aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0833_11960 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:scp00074]
D HMPREF0833_11103 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF0833_11502 putative acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF0833_11945 putative acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF0833_11947 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:scp00561]
D HMPREF0833_10837 putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF0833_11718 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D HMPREF0833_10381 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF0833_11501 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HMPREF0833_10433 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HMPREF0833_10172 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0833_10321 lipid kinase, YegS/Rv2252/BmrU family K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HMPREF0833_10906 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF0833_10907 glycosyltransferase, group 1 family protein K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D HMPREF0833_10323 putative glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D HMPREF0833_10744 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF0833_10749 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:scp00564]
D HMPREF0833_11329 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HMPREF0833_10433 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HMPREF0833_10172 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF0833_10321 lipid kinase, YegS/Rv2252/BmrU family K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D HMPREF0833_10809 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HMPREF0833_11752 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HMPREF0833_11460 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF0833_11394 phospholipase D domain protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:scp00600]
D HMPREF0833_11360 Gram-positive signal peptide protein, YSIRK family K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF0833_10744 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF0833_10749 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF0833_11884 Gram-positive signal peptide protein, YSIRK family K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0833_11630 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:scp00230]
D HMPREF0833_10146 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HMPREF0833_10406 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HMPREF0833_10457 pgcA; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0833_11495 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0833_10449 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF0833_11505 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF0833_11510 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HMPREF0833_11507 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HMPREF0833_11504 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HMPREF0833_11506 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HMPREF0833_11512 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HMPREF0833_11511 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HMPREF0833_11503 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HMPREF0833_11515 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF0833_11508 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF0833_10787 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF0833_11144 LPXTG-motif cell wall anchor domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0833_10408 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0833_10411 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0833_11487 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HMPREF0833_11466 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0833_11032 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HMPREF0833_10483 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HMPREF0833_10496 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0833_10410 class I glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0833_10482 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D HMPREF0833_12010 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HMPREF0833_10199 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0833_10198 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF0833_11392 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF0833_11701 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF0833_10451 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HMPREF0833_11346 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF0833_10783 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D HMPREF0833_11608 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF0833_10183 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:scp00240]
D HMPREF0833_10608 putative carbamoyl-phosphate synthetase, large subunit, oligomerization domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF0833_10609 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF0833_10610 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF0833_10424 putative dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HMPREF0833_10417 dihydroorotate dehydrogenase 1B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HMPREF0833_10416 dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HMPREF0833_11208 dihydroorotate dehydrogenase 1A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D HMPREF0833_10419 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HMPREF0833_10418 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF0833_10939 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HMPREF0833_11892 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HMPREF0833_10305 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HMPREF0833_10768 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HMPREF0833_11144 LPXTG-motif cell wall anchor domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0833_10600 HAD hydrolase, TIGR02254 family K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D HMPREF0833_10969 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF0833_10611 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF0833_10658 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D HMPREF0833_10656 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HMPREF0833_11392 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF0833_10199 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0833_10198 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF0833_10309 putative ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF0833_10959 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HMPREF0833_11319 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF0833_10488 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HMPREF0833_10582 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF0833_11069 sdh; serine 3-dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:scp00250]
D HMPREF0833_11100 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF0833_10037 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HMPREF0833_10639 aspB; aspartate transaminase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D HMPREF0833_11097 putative aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF0833_10934 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HMPREF0833_11346 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF0833_11515 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF0833_10610 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF0833_11210 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF0833_11260 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0833_10608 putative carbamoyl-phosphate synthetase, large subunit, oligomerization domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF0833_10609 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF0833_11732 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF0833_11505 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:scp00260]
D HMPREF0833_11941 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0833_10528 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0833_10718 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF0833_10717 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HMPREF0833_11570 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF0833_10492 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0833_10837 putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF0833_11895 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10093 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10838 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D HMPREF0833_11069 sdh; serine 3-dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_11453 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0833_11454 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0833_11919 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HMPREF0833_11580 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF0833_11579 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HMPREF0833_10050 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:scp00270]
D HMPREF0833_11791 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF0833_10001 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HMPREF0833_10971 putative hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0833_11158 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF0833_10310 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF0833_10148 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HMPREF0833_10766 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D HMPREF0833_12008 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF0833_11941 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0833_10528 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0833_10718 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF0833_10717 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HMPREF0833_10786 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HMPREF0833_10972 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HMPREF0833_10437 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0833_10119 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_10440 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_11453 sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF0833_11454 sdaAA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:scp00280]
D HMPREF0833_10437 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_11226 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:scp00290]
D HMPREF0833_11919 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HMPREF0833_10430 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF0833_10431 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF0833_10428 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HMPREF0833_11916 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF0833_11917 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF0833_11918 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF0833_11566 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF0833_10486 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF0833_10437 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0833_11097 putative aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF0833_10427 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:scp00300]
D HMPREF0833_10718 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF0833_11941 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0833_10528 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0833_10527 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF0833_10587 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HMPREF0833_11335 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HMPREF0833_11083 peptidase dimerization domain protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF0833_11035 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HMPREF0833_11499 aromatic-amino-acid transaminase K00841 patA; aminotransferase [EC:2.6.1.-]
D HMPREF0833_11334 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D HMPREF0833_10158 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:scp00220]
D HMPREF0833_10182 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HMPREF0833_10181 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D HMPREF0833_11260 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0833_10608 putative carbamoyl-phosphate synthetase, large subunit, oligomerization domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF0833_10609 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF0833_10183 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HMPREF0833_11210 gdhA; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF0833_11097 putative aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:scp00330]
D HMPREF0833_10546 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D HMPREF0833_10681 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HMPREF0833_10683 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF0833_10682 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:scp00340]
D HMPREF0833_11154 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D HMPREF0833_11148 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D HMPREF0833_11147 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D HMPREF0833_11155 hutG; formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D HMPREF0833_11149 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D HMPREF0833_10770 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism
D HMPREF0833_11529 adh; aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF0833_11960 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:scp00400]
D HMPREF0833_11104 putative 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF0833_10328 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HMPREF0833_10326 aroD; 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D HMPREF0833_10333 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HMPREF0833_10332 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HMPREF0833_10329 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HMPREF0833_11575 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HMPREF0833_11576 trpD; anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D HMPREF0833_11578 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D HMPREF0833_11577 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D HMPREF0833_11580 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF0833_11579 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HMPREF0833_10050 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HMPREF0833_10392 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D HMPREF0833_10330 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF0833_10334 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:scp00430]
D HMPREF0833_10934 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D HMPREF0833_10454 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF0833_11663 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:scp00450]
D HMPREF0833_10972 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HMPREF0833_10971 putative hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0833_11158 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF0833_11930 sufS; cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HMPREF0833_11996 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF0833_10094 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:scp00460]
D HMPREF0833_11100 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF0833_10037 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HMPREF0833_10492 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:scp00470]
D HMPREF0833_11102 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0833_10157 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0833_11431 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF0833_11429 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF0833_11033 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF0833_10057 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF0833_11035 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:scp00480]
D HMPREF0833_10273 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0833_10871 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D HMPREF0833_11058 gnd; phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF0833_10895 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF0833_10803 hYR; peroxiredoxin HYR1 K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:scp00511]
D HMPREF0833_11360 Gram-positive signal peptide protein, YSIRK family K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF0833_11884 Gram-positive signal peptide protein, YSIRK family K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0833_11630 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0833_11628 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF0833_11581 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF0833_11359 Gram-positive signal peptide protein, YSIRK family K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:scp00542]
D HMPREF0833_11927 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:scp00541]
D HMPREF0833_11330 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF0833_10286 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0833_10739 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF0833_10777 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF0833_10775 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF0833_10776 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HMPREF0833_10294 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D HMPREF0833_11108 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF0833_10145 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF0833_11650 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0833_11377 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:scp00550]
D HMPREF0833_10217 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0833_10311 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0833_10715 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0833_11045 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF0833_10057 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF0833_10157 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0833_10158 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF0833_10928 putative undecaprenol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D HMPREF0833_11751 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF0833_11925 putative undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0833_11020 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0833_11991 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0833_10058 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0833_12001 ponA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_11370 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_11933 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF0833_11878 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10663 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10974 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D HMPREF0833_10229 Mur ligase middle domain protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF0833_10228 CobB/CobQ-like protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF0833_10855 FemAB family protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D HMPREF0833_10856 FemAB family protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D HMPREF0833_11647 transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D HMPREF0833_10155 penicillin-binding protein, transpeptidase domain protein K00687 pbp2B; penicillin-binding protein 2B
D HMPREF0833_11990 pbpX; penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:scp00552]
D HMPREF0833_11925 putative undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0833_11020 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0833_11927 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF0833_11383 glycosyltransferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D HMPREF0833_11303 putative accessory Sec system glycosylation protein GtfA K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D HMPREF0833_11431 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF0833_11429 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF0833_11430 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF0833_11428 DltD C-terminal domain protein K03740 dltD; D-alanine transfer protein
D HMPREF0833_10335 cell envelope-like function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HMPREF0833_11965 brpA; biofilm regulatory protein A K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HMPREF0833_10323 putative glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D HMPREF0833_10906 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF0833_11382 LICD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D HMPREF0833_11927 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:scp00543]
D HMPREF0833_11927 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF0833_11791 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:scp00730]
D HMPREF0833_10707 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_10448 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_10706 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HMPREF0833_11275 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF0833_11273 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D HMPREF0833_11608 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:scp00740]
D HMPREF0833_11961 Cof-like hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D HMPREF0833_10262 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HMPREF0833_10146 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:scp00750]
D HMPREF0833_11886 putative phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HMPREF0833_11570 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:scp00760]
D HMPREF0833_11997 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HMPREF0833_10408 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0833_10411 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF0833_11353 putative nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D HMPREF0833_11144 LPXTG-motif cell wall anchor domain protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D HMPREF0833_10024 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HMPREF0833_11998 nadE; NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D HMPREF0833_10413 putative NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D HMPREF0833_10452 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:scp00770]
D HMPREF0833_11916 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF0833_11917 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF0833_11918 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF0833_11566 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF0833_10486 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF0833_10660 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D HMPREF0833_10460 coaB; phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D HMPREF0833_10459 coaC; phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D HMPREF0833_10039 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HMPREF0833_10925 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HMPREF0833_11103 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF0833_10437 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:scp00780]
D HMPREF0833_11949 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF0833_10136 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0833_11948 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0833_11951 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HMPREF0833_10752 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:scp00785]
D HMPREF0833_10510 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_10514 acoA; TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF0833_10513 acoB; TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF0833_10512 2-oxo acid dehydrogenase acyltransferase (catalytic domain) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:scp00790]
D HMPREF0833_11667 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HMPREF0833_11668 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D HMPREF0833_11665 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HMPREF0833_10581 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF0833_11666 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HMPREF0833_11396 folC; bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HMPREF0833_11186 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00670 One carbon pool by folate [PATH:scp00670]
D HMPREF0833_10581 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF0833_10461 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF0833_11151 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF0833_10074 folD; tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF0833_11150 fchA; methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D HMPREF0833_10492 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF0833_11507 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HMPREF0833_11508 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF0833_11149 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D HMPREF0833_12013 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF0833_10582 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF0833_11157 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HMPREF0833_11333 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:scp00860]
D HMPREF0833_11734 hypothetical protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D HMPREF0833_11173 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:scp00130]
D HMPREF0833_11639 flavodoxin-like protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D HMPREF0833_10622 flavodoxin-like protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D HMPREF0833_11727 NmrA family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:scp00900]
D HMPREF0833_11226 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D HMPREF0833_11227 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D HMPREF0833_11234 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D HMPREF0833_11232 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D HMPREF0833_11233 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D HMPREF0833_11231 fni; isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D HMPREF0833_10083 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF0833_11751 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:scp00523]
D HMPREF0833_10777 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF0833_10775 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF0833_10776 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HMPREF0833_10294 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D HMPREF0833_10775 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:scp00946]
D HMPREF0833_10568 prevent-host-death family protein K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HMPREF0833_10506 acetyl xylan esterase (AXE1) K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:scp00332]
D HMPREF0833_10683 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF0833_10682 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:scp00261]
D HMPREF0833_11941 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF0833_10528 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF0833_10527 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF0833_10587 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:scp00521]
D HMPREF0833_10583 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF0833_10457 pgcA; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF0833_10265 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF0833_10777 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF0833_10775 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF0833_10776 putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HMPREF0833_10294 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HMPREF0833_10583 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:scp00525]
D HMPREF0833_10777 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF0833_10775 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D HMPREF0833_10330 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HMPREF0833_11575 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HMPREF0833_11947 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF0833_10136 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0833_11948 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HMPREF0833_11502 putative acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF0833_11945 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D HMPREF0833_10310 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D HMPREF0833_10487 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation
D HMPREF0833_11039 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:scp00625]
D HMPREF0833_11960 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF0833_11529 adh; aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D HMPREF0833_10487 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D HMPREF0833_10487 dmpI; 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:scp00626]
D HMPREF0833_11960 adhP; alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF0833_11529 adh; aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:scp03020]
D HMPREF0833_11648 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0833_11649 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0833_11612 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0833_12011 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF0833_11890 rpoE; DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:scp03010]
D HMPREF0833_10439 putative ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF0833_11364 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF0833_11593 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF0833_11440 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF0833_11604 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF0833_11137 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF0833_11267 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF0833_11601 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF0833_11805 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF0833_11586 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF0833_11611 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF0833_11268 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF0833_11610 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF0833_11600 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0833_11782 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF0833_10599 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF0833_11596 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF0833_11135 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF0833_11591 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF0833_10661 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF0833_10241 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HMPREF0833_10941 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF0833_11590 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF0833_11587 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF0833_11588 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF0833_11599 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF0833_11602 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF0833_10574 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF0833_11446 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF0833_10575 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF0833_10942 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF0833_11804 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF0833_11597 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF0833_11606 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF0833_11594 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF0833_11613 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF0833_11603 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF0833_10394 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF0833_10308 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF0833_10701 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF0833_11592 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF0833_11589 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF0833_11598 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF0833_10699 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF0833_11906 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF0833_11595 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF0833_11605 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF0833_10383 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0833_11565 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0833_11564 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0833_11368 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0833_11280 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF0833_10307 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF0833_r10001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:scp00970]
D HMPREF0833_t10001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10021 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0833_t10061 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0833_t10003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0833_t10027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0833_t10020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF0833_t10015 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0833_t10055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0833_t10022 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0833_t10024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0833_t10048 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0833_t10007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10054 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF0833_t10042 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0833_t10047 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0833_t10005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0833_t10028 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0833_t10057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0833_t10036 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10037 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10039 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10050 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10040 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0833_t10051 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0833_t10011 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0833_t10035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0833_t10038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10059 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10053 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF0833_t10014 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0833_t10052 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0833_t10002 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0833_t10026 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0833_t10045 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0833_11309 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HMPREF0833_11093 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF0833_11092 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF0833_11094 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF0833_10197 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0833_11426 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0833_10638 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF0833_11983 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HMPREF0833_11984 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HMPREF0833_10905 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0833_11955 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0833_11794 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0833_10094 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0833_12013 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF0833_10019 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0833_11721 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0833_10067 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0833_10866 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0833_11412 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0833_11754 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0833_11569 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0833_10826 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0833_10824 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0833_11646 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0833_11467 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:scp03060]
D HMPREF0833_11607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_11297 secY2; accessory Sec system translocase SecY2 K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_11367 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0833_10923 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0833_11750 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0833_11283 putative OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11040 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11293 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_11105 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_10504 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0833_n10016 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF0833_10896 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0833_10477 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HMPREF0833_10476 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D HMPREF0833_10251 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0833_11220 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0833_10685 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:scp04122]
D HMPREF0833_10707 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_10448 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_11451 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF0833_10706 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:scp03018]
D HMPREF0833_10835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0833_11790 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF0833_10922 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF0833_10166 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HMPREF0833_12009 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF0833_11259 rnjA; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0833_11311 rnjB; ribonuclease J 2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0833_11881 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0833_11685 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:scp03030]
D HMPREF0833_11239 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0833_10248 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0833_11769 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0833_10765 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0833_10958 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0833_10176 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0833_11476 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0833_11445 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0833_10539 toprim domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0833_10243 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF0833_11674 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11136 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_10524 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF0833_11219 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D HMPREF0833_11582 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0833_10320 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:scp03410]
D HMPREF0833_10149 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF0833_10422 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0833_10455 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF0833_10926 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0833_11405 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HMPREF0833_10152 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF0833_11582 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0833_10790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0833_10320 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:scp03420]
D HMPREF0833_11481 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0833_11125 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF0833_10624 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF0833_10673 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF0833_10256 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0833_11582 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0833_10320 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:scp03430]
D HMPREF0833_11410 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HMPREF0833_11216 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HMPREF0833_11407 mutL; DNA mismatch repair domain protein K03572 mutL; DNA mismatch repair protein MutL
D HMPREF0833_10256 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0833_10081 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF0833_10082 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF0833_10790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0833_11674 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11136 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_10248 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0833_11769 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0833_11476 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0833_10765 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0833_10176 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0833_10958 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0833_11239 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0833_10320 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:scp03440]
D HMPREF0833_10790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0833_11674 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11136 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11465 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF0833_11500 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF0833_10156 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF0833_11402 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF0833_11582 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0833_11406 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF0833_11524 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF0833_11101 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0833_11221 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HMPREF0833_10248 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0833_11769 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0833_11476 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0833_10765 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0833_10176 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0833_10958 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0833_11239 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0833_12012 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:scp03250]
D HMPREF0833_10950 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:scp02010]
D HMPREF0833_10711 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HMPREF0833_10712 putative spermidine/putrescine ABC transporter, permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D HMPREF0833_10713 ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D HMPREF0833_10714 potA; spermidine/putrescine ABC transporter, ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HMPREF0833_11729 ABC transporter, substrate-binding protein, QAT family K05845 opuC; osmoprotectant transport system substrate-binding protein
D HMPREF0833_11728 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF0833_11797 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF0833_11419 mdxE; maltodextrin-binding protein MdxE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF0833_11420 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0833_11421 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0833_10748 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF0833_10747 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF0833_10746 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF0833_11633 ABC transporter, solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D HMPREF0833_11631 ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D HMPREF0833_11632 putative protein LplC K17320 lplC; putative aldouronate transport system permease protein
D HMPREF0833_10655 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0833_10653 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0833_10652 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0833_10654 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0833_11675 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF0833_10267 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0833_10268 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF0833_10269 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF0833_10270 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0833_10271 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0833_10632 ABC transporter, permease protein K10036 glnH; glutamine transport system substrate-binding protein
D HMPREF0833_10633 artM; arginine ABC transporter, ATP-binding protein ArtM K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0833_11085 ABC transporter, substrate-binding protein, family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D HMPREF0833_11993 ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D HMPREF0833_11994 artM; arginine ABC transporter, ATP-binding protein ArtM K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0833_11737 ABC transporter, substrate-binding protein, family 3 K16957 tcyK; L-cystine transport system substrate-binding protein
D HMPREF0833_11738 ABC transporter, permease protein K16958 tcyL; L-cystine transport system permease protein
D HMPREF0833_11739 ABC transporter, permease protein K16959 tcyM; L-cystine transport system permease protein
D HMPREF0833_11740 glnQ; glutamine ABC transporter, ATP-binding protein GlnQ K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0833_11923 ABC transporter, permease protein K17073 lysX1; putative lysine transport system substrate-binding protein
D HMPREF0833_11922 artM; arginine ABC transporter, ATP-binding protein ArtM K17076 lysY; putative lysine transport system ATP-binding protein
D HMPREF0833_10966 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF0833_10965 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF0833_10964 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF0833_10963 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF0833_10962 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF0833_11084 putative D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF0833_11081 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D HMPREF0833_11082 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF0833_10150 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10730 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10130 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11720 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11934 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11935 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0833_11936 putative oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D HMPREF0833_11937 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0833_11938 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0833_11623 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF0833_10099 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF0833_11622 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D HMPREF0833_11621 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HMPREF0833_11706 fimA; manganese ABC transporter substrate-binding lipoprotein K19971 psaA; manganese/zinc transport system substrate-binding protein
D HMPREF0833_11707 mtsC; metal ion ABC transporter, permease protein K19972 psaC; manganese/zinc transport system permease protein
D HMPREF0833_11708 mntA; manganese transport system ATP-binding protein MntA K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D HMPREF0833_10278 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF0833_11070 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0833_11183 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0833_11457 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0833_11182 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11459 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11181 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11458 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11643 ABC-2 type transporter K11051 cylB; multidrug/hemolysin transport system permease protein
D HMPREF0833_11642 putative daunorubicin/doxorubicin resistance ATP-binding protein DrrA K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D HMPREF0833_10754 efflux ABC transporter, permease protein K09813 hrtB; hemin transport system permease protein
D HMPREF0833_10755 ABC transporter, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF0833_10106 efflux ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D HMPREF0833_10129 hypothetical protein K19084 braE; bacitracin transport system permease protein
D HMPREF0833_10105 putative bacteriocin export ABC transporter, lactococcin 972 group K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF0833_10128 putative bacteriocin export ABC transporter, lactococcin 972 group K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF0833_10847 putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HMPREF0833_10848 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0833_10648 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10647 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10931 ABC transporter, ATP-binding protein K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D HMPREF0833_10930 ABC transporter, ATP-binding protein K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D HMPREF0833_10533 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_11114 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10807 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10635 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10532 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_11113 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10634 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10806 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:scp02060]
D HMPREF0833_10202 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF0833_10201 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HMPREF0833_11056 PTS system IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D HMPREF0833_11118 PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF0833_10981 treP; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HMPREF0833_10689 lacF; lactose-specific phosphotransferase enzyme IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF0833_10688 PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF0833_10342 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_11713 putative N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_10340 licB; lichenan-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_11714 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_10341 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_10124 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_11715 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_11521 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF0833_11959 putative PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF0833_11681 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11519 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11958 manY; mannose permease IIC component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11520 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D HMPREF0833_11957 putative mannose permease IID component K02796 manZ; mannose PTS system EIID component
D HMPREF0833_11679 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HMPREF0833_10697 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D HMPREF0833_10696 hypothetical protein K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D HMPREF0833_10695 PTS system Galactitol-specific IIC component K20114 gatC; galactose PTS system EIIC component
D HMPREF0833_10590 putative PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF0833_10591 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:scp03070]
D HMPREF0833_11367 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0833_10923 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0833_11607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_11297 secY2; accessory Sec system translocase SecY2 K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_11750 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0833_11283 putative OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11040 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11293 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_11105 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_10896 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0833_10504 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0833_10477 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HMPREF0833_10476 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:scp02020]
D HMPREF0833_10267 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0833_11473 htrA; serine protease do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF0833_10903 putative sensor protein kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D HMPREF0833_10904 walR; transcriptional regulatory protein WalR K07668 vicR; two-component system, OmpR family, response regulator VicR
D HMPREF0833_11475 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0833_10106 efflux ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D HMPREF0833_10129 hypothetical protein K19084 braE; bacitracin transport system permease protein
D HMPREF0833_10105 putative bacteriocin export ABC transporter, lactococcin 972 group K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF0833_10128 putative bacteriocin export ABC transporter, lactococcin 972 group K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF0833_10103 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D HMPREF0833_10102 graR; response regulator protein GraR K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D HMPREF0833_11431 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF0833_11430 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF0833_11429 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF0833_11428 DltD C-terminal domain protein K03740 dltD; D-alanine transfer protein
D HMPREF0833_10281 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF0833_10280 putative response regulator ArlR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HMPREF0833_11878 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10663 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10630 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D HMPREF0833_10628 response regulator receiver domain protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D HMPREF0833_10629 transcriptional regulatory protein, C-terminal domain protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D HMPREF0833_10078 citrate carrier protein, CCS family K11616 maeN; malate:Na+ symporter
D HMPREF0833_11687 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF0833_11686 LytTr DNA-binding domain protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D HMPREF0833_11471 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF0833_11470 LytTr DNA-binding domain protein K12295 comE; two-component system, LytTR family, response regulator ComE
D HMPREF0833_11489 comX; transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D HMPREF0833_11485 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HMPREF0833_11914 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF0833_11915 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR
D HMPREF0833_12019 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D HMPREF0833_12020 vraR; response regulator protein VraR K11618 liaR; two-component system, NarL family, response regulator LiaR
D HMPREF0833_11260 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0833_11635 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF0833_10046 cache domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF0833_11636 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
D HMPREF0833_10045 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
D HMPREF0833_11526 ptpA; low molecular weight protein-tyrosine-phosphatase PtpA K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D HMPREF0833_11650 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D HMPREF0833_11377 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:scp02024]
D HMPREF0833_12008 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF0833_11575 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HMPREF0833_11104 putative 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF0833_10547 amino acid permease K20265 gadC; glutamate:GABA antiporter
D HMPREF0833_10966 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF0833_10965 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF0833_10964 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF0833_10963 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF0833_10962 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF0833_11687 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF0833_11686 LytTr DNA-binding domain protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D HMPREF0833_11471 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF0833_11470 LytTr DNA-binding domain protein K12295 comE; two-component system, LytTR family, response regulator ComE
D HMPREF0833_10281 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF0833_10280 putative response regulator ArlR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HMPREF0833_10150 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10730 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10130 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11720 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11934 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11935 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0833_11936 putative oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D HMPREF0833_11937 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0833_11938 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0833_11489 comX; transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D HMPREF0833_11858 DNA-binding helix-turn-helix protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF0833_10223 transcriptional activator, Rgg/GadR/MutR family domain protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF0833_11062 DNA-binding helix-turn-helix protein K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D HMPREF0833_10691 lacD; tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D HMPREF0833_11283 putative OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11040 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11367 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0833_10923 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0833_11607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_11297 secY2; accessory Sec system translocase SecY2 K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_11750 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0833_11293 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_11105 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_10896 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0833_10504 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0833_10630 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D HMPREF0833_10628 response regulator receiver domain protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D HMPREF0833_10629 transcriptional regulatory protein, C-terminal domain protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D HMPREF0833_11675 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:scp02040]
D HMPREF0833_11085 ABC transporter, substrate-binding protein, family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D HMPREF0833_10244 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HMPREF0833_10835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D HMPREF0833_11416 LPXTG-motif cell wall anchor domain protein K13732 fnbA; fibronectin-binding protein A
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:scp01501]
D HMPREF0833_10569 glycosyl hydrolase family 3 N-terminal domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0833_10743 beta-hexosaminidase A family protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D HMPREF0833_11485 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HMPREF0833_10150 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10730 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10130 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11720 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11934 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11935 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0833_11936 putative oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D HMPREF0833_11937 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0833_11938 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0833_12001 ponA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_11647 transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D HMPREF0833_11370 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_10155 penicillin-binding protein, transpeptidase domain protein K00687 pbp2B; penicillin-binding protein 2B
D HMPREF0833_11990 pbpX; penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:scp01502]
D HMPREF0833_10157 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0833_11102 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0833_10158 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF0833_11991 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0833_10058 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0833_11878 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10663 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:scp01503]
D HMPREF0833_11374 glycosyl hydrolase family 25 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HMPREF0833_11473 htrA; serine protease do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF0833_10950 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF0833_11431 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF0833_11430 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF0833_11429 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF0833_11428 DltD C-terminal domain protein K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:scp01000]
C 01001 Protein kinases [BR:scp01001]
D HMPREF0833_10550 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF0833_12016 putative serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF0833_11385 cpsD; tyrosine-protein kinase CpsD K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D HMPREF0833_10903 putative sensor protein kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D HMPREF0833_10103 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D HMPREF0833_10281 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF0833_10630 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D HMPREF0833_11914 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF0833_12019 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D HMPREF0833_11687 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF0833_11471 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF0833_11635 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF0833_10046 cache domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:scp01009]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0833_12015 stp; serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D HMPREF0833_10838 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:scp01002]
D HMPREF0833_10685 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HMPREF0833_12000 pepC; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF0833_10496 guaA; GMP synthase (glutamine-hydrolyzing) domain protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0833_10410 class I glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF0833_11328 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D HMPREF0833_11730 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D HMPREF0833_11509 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0833_11494 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0833_11505 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF0833_11732 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF0833_10842 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D HMPREF0833_10442 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF0833_11498 srtB; sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D HMPREF0833_11215 putative dipeptidase B K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF0833_10920 peptidase, C69 family K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF0833_11331 peptidase, C69 family K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF0833_11230 peptidase, C69 family K08659 pepDA; dipeptidase [EC:3.4.-.-]
D HMPREF0833_11276 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0833_11285 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0833_11664 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0833_10631 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0833_10674 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0833_10361 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0833_10378 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF0833_10273 pepN; membrane alanyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF0833_10193 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HMPREF0833_11709 pepO; neprilysin K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HMPREF0833_11878 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10663 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10669 pepV; dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D HMPREF0833_11083 peptidase dimerization domain protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF0833_10607 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HMPREF0833_11334 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D HMPREF0833_10314 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HMPREF0833_11124 putative Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HMPREF0833_10207 Gram-positive signal peptide protein, YSIRK family K08643 zmpB; zinc metalloprotease ZmpB [EC:3.4.24.-]
D HMPREF0833_11775 pepS; aminopeptidase PepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D HMPREF0833_11488 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF0833_11670 pepA; glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D HMPREF0833_10731 M42 glutamyl aminopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D HMPREF0833_11065 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HMPREF0833_11753 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HMPREF0833_11473 htrA; serine protease do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF0833_11142 Gram-positive signal peptide protein, YSIRK family K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0833_11143 Gram-positive signal peptide protein, YSIRK family K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0833_11982 Gram-positive signal peptide protein, YSIRK family K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0833_11933 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF0833_10968 clpP; endopeptidase Clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF0833_10726 LPXTG-motif cell wall anchor domain protein K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D HMPREF0833_10729 LPXTG-motif cell wall anchor domain protein K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D HMPREF0833_11237 pepX; Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D HMPREF0833_10040 PDZ domain protein K07177 K07177; Lon-like protease
D HMPREF0833_11856 DNA-binding helix-turn-helix protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF0833_10251 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0833_11220 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF0833_10879 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:scp01003]
D HMPREF0833_10906 glycosyltransferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF0833_10907 glycosyltransferase, group 1 family protein K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D HMPREF0833_10206 glgA; glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D HMPREF0833_12001 ponA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_11647 transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D HMPREF0833_11370 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_11383 glycosyltransferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D HMPREF0833_11303 putative accessory Sec system glycosylation protein GtfA K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D HMPREF0833_11927 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:scp01005]
D HMPREF0833_10295 hypothetical protein K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D HMPREF0833_10296 glycosyltransferase, group 2 family protein K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D HMPREF0833_10300 rhamnan synthesis protein F K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D HMPREF0833_11927 glycosyltransferase, group 4 family K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D HMPREF0833_10292 yfdH; bactoprenol glucosyl transferase-like protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:scp01011]
D HMPREF0833_10217 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0833_10311 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF0833_10715 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF0833_11045 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF0833_10057 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF0833_10974 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D HMPREF0833_10157 D-ala D-ala ligase N-terminal domain protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF0833_10855 FemAB family protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D HMPREF0833_10856 FemAB family protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D HMPREF0833_11102 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF0833_11033 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF0833_11991 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF0833_10058 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF0833_11925 putative undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0833_11020 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF0833_12001 ponA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_11647 transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D HMPREF0833_11370 penicillin-binding protein, 1A family K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF0833_10155 penicillin-binding protein, transpeptidase domain protein K00687 pbp2B; penicillin-binding protein 2B
D HMPREF0833_11990 pbpX; penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
D HMPREF0833_11933 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF0833_11878 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10663 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_11509 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0833_11494 CHAP domain protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF0833_10442 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF0833_11498 srtB; sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D HMPREF0833_11042 YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D HMPREF0833_11374 glycosyl hydrolase family 25 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:scp01004]
D HMPREF0833_11947 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF0833_10502 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF0833_11944 fabHA; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF0833_11949 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF0833_10136 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0833_11948 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF0833_11951 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HMPREF0833_11946 putative enoyl-[acyl-carrier-protein] reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HMPREF0833_11942 enoyl-CoA hydratase/isomerase family protein K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D HMPREF0833_11501 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HMPREF0833_10433 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HMPREF0833_10172 Acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:scp01006]
D HMPREF0833_10083 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF0833_11751 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF0833_10797 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:scp01007]
D HMPREF0833_11309 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HMPREF0833_11646 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0833_11467 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF0833_11794 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0833_11412 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0833_10094 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0833_10067 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0833_10019 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0833_11721 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0833_10866 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0833_11426 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0833_10638 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF0833_11569 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0833_11983 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HMPREF0833_11984 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HMPREF0833_11955 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0833_11754 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0833_10905 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0833_10197 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0833_10826 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0833_10824 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0833_11097 putative aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF0833_11499 aromatic-amino-acid transaminase K00841 patA; aminotransferase [EC:2.6.1.-]
D HMPREF0833_10971 putative hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF0833_10437 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF0833_11186 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:scp00194]
D HMPREF0833_10215 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF0833_10214 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF0833_10213 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF0833_10212 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF0833_10211 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF0833_10210 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF0833_10208 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF0833_10209 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:scp03000]
D HMPREF0833_10698 transcriptional regulator, DeoR family K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D HMPREF0833_10592 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D HMPREF0833_11167 transcriptional regulator, DeoR family K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D HMPREF0833_10704 putative transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D HMPREF0833_10908 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF0833_10751 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF0833_11423 malR; HTH-type transcriptional regulator MalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF0833_11120 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D HMPREF0833_10982 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D HMPREF0833_10497 UbiC transcription regulator-associated domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D HMPREF0833_11261 glnR; HTH-type transcriptional regulator GlnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D HMPREF0833_10355 transcriptional regulator, MerR family K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D HMPREF0833_10092 perR; peroxide-responsive repressor PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D HMPREF0833_10180 cyclic nucleotide-binding domain protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D HMPREF0833_11777 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D HMPREF0833_11815 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D HMPREF0833_11560 transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D HMPREF0833_10131 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D HMPREF0833_11703 iron dependent repressor DNA binding domain protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D HMPREF0833_10752 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HMPREF0833_11353 putative nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D HMPREF0833_11858 DNA-binding helix-turn-helix protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF0833_10223 transcriptional activator, Rgg/GadR/MutR family domain protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF0833_11062 DNA-binding helix-turn-helix protein K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D HMPREF0833_11270 purR; pur operon repressor PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D HMPREF0833_10445 CoA binding domain protein K01926 rex; redox-sensing transcriptional repressor
D HMPREF0833_11096 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D HMPREF0833_10095 DNA-binding protein K07727 K07727; putative transcriptional regulator
D HMPREF0833_10818 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF0833_11077 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF0833_10363 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF0833_11867 DNA-binding helix-turn-helix protein K07729 K07729; putative transcriptional regulator
D HMPREF0833_11474 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF0833_10690 PRD domain protein K02531 lacT; transcriptional antiterminator
D HMPREF0833_10085 arginine repressor, C-terminal domain protein K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF0833_11411 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF0833_10186 arginine repressor, C-terminal domain protein K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF0833_11879 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HMPREF0833_11358 ctsR; transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D HMPREF0833_10611 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF0833_11054 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HMPREF0833_11489 comX; transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:scp03021]
D HMPREF0833_11612 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0833_11648 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0833_11649 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0833_11890 rpoE; DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D HMPREF0833_12011 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF0833_10244 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HMPREF0833_11973 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF0833_11121 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF0833_11365 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF0833_11041 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:scp03019]
D HMPREF0833_10900 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0833_11259 rnjA; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0833_11311 rnjB; ribonuclease J 2 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF0833_12009 YmdA/YtgF family protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF0833_10922 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF0833_11271 HD domain protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D HMPREF0833_10166 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HMPREF0833_11992 cshB; DEAD-box ATP-dependent RNA helicase CshB K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D HMPREF0833_10835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0833_11790 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF0833_10249 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF0833_11881 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0833_11685 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0833_10237 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:scp03011]
D HMPREF0833_10439 putative ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF0833_11364 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF0833_11593 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF0833_11440 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF0833_11604 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF0833_11137 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF0833_11267 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF0833_11601 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF0833_11805 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF0833_11586 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF0833_11611 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF0833_11268 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF0833_11610 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF0833_11600 rpsN; ribosomal protein S14p/S29e K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF0833_11782 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF0833_10599 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF0833_11596 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF0833_11135 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF0833_11591 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF0833_10661 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF0833_10241 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HMPREF0833_10941 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF0833_11590 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF0833_11587 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF0833_11588 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF0833_11599 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF0833_11602 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF0833_11446 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF0833_10575 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF0833_10942 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF0833_10574 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF0833_11804 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF0833_11597 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF0833_11606 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF0833_11594 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF0833_11613 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF0833_11603 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF0833_10394 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF0833_10308 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF0833_10701 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF0833_11592 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF0833_11589 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF0833_11598 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF0833_10699 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF0833_11906 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF0833_11595 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF0833_11605 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF0833_10383 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF0833_11565 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF0833_11564 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0833_11368 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF0833_11280 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF0833_10307 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF0833_r10012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:scp03009]
D HMPREF0833_10900 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0833_10927 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF0833_10234 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D HMPREF0833_11973 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF0833_11121 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF0833_11365 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF0833_10054 putative 16S pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HMPREF0833_11780 pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HMPREF0833_11277 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HMPREF0833_12014 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HMPREF0833_10659 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HMPREF0833_10038 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HMPREF0833_11695 RNA methyltransferase, RsmE family K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HMPREF0833_11067 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF0833_11988 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HMPREF0833_10956 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HMPREF0833_10084 putative ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HMPREF0833_11640 methyltransferase domain protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D HMPREF0833_11801 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HMPREF0833_11472 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HMPREF0833_10325 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HMPREF0833_10048 rlmN; 23S rRNA m2A2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HMPREF0833_10336 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HMPREF0833_11026 rluB; pseudouridine synthase B, ribosomal large subunit K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HMPREF0833_11371 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF0833_10684 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF0833_10453 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF0833_11256 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HMPREF0833_10595 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HMPREF0833_11694 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HMPREF0833_11398 RNAse H domain protein, YqgF family K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HMPREF0833_11795 RNase3 domain protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D HMPREF0833_10166 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HMPREF0833_11992 cshB; DEAD-box ATP-dependent RNA helicase CshB K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D HMPREF0833_11275 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF0833_11050 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D HMPREF0833_10525 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D HMPREF0833_10796 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D HMPREF0833_10022 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D HMPREF0833_10491 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF0833_11701 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF0833_11977 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D HMPREF0833_11972 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D HMPREF0833_11464 yaaA; S4 domain protein YaaA K14761 rlbA; ribosome-associated protein
D HMPREF0833_10027 iojap-like protein K09710 ybeB; ribosome-associated protein
D HMPREF0833_10929 ybeY; translation metalloprotein YbeY K07042 ybeY; probable rRNA maturation factor
D HMPREF0833_10023 RNA-binding protein, YhbY family K07574 yhbY; RNA-binding protein
D HMPREF0833_10005 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D HMPREF0833_11479 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D HMPREF0833_11060 putative ACR, COG1399 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:scp03016]
D HMPREF0833_10794 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D HMPREF0833_10586 putative tRNA adenylyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HMPREF0833_11754 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF0833_10067 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF0833_11721 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0833_10094 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF0833_11412 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0833_10866 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF0833_11426 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0833_10197 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF0833_10638 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF0833_10905 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF0833_11955 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF0833_11794 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF0833_10019 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF0833_11569 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF0833_10826 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF0833_10824 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF0833_11646 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0833_11467 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF0833_11702 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HMPREF0833_11967 hit; protein hit K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF0833_11971 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HMPREF0833_11885 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HMPREF0833_10261 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HMPREF0833_10707 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_10448 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_10491 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF0833_10797 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF0833_10404 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HMPREF0833_11448 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HMPREF0833_11284 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HMPREF0833_n10026 Bacterial RNase P class B K01978 rnpB; M1 RNA
D HMPREF0833_11983 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HMPREF0833_11984 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HMPREF0833_11309 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HMPREF0833_10864 putative YbaK/EbsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HMPREF0833_10667 YbaK/proline--tRNA ligase associated domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D HMPREF0833_11342 cytidine and deoxycytidylate deaminase zinc-binding region K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HMPREF0833_11349 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HMPREF0833_10518 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HMPREF0833_10594 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HMPREF0833_10781 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D HMPREF0833_11022 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HMPREF0833_11038 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D HMPREF0833_11451 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF0833_10187 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HMPREF0833_11109 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D HMPREF0833_11585 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HMPREF0833_10706 thiI; thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HMPREF0833_11486 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HMPREF0833_11257 yeaZ; universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HMPREF0833_11255 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HMPREF0833_11963 hydrolase, P-loop family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HMPREF0833_10029 hypothetical protein K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D HMPREF0833_10922 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF0833_11790 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:scp03012]
D HMPREF0833_11976 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF0833_10306 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF0833_10221 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HMPREF0833_11363 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF0833_10859 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0833_11266 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0833_10489 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HMPREF0833_10938 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D HMPREF0833_10490 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HMPREF0833_11480 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HMPREF0833_11609 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HMPREF0833_11123 efp; translation elongation factor P K02356 efp; elongation factor P
D HMPREF0833_10849 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HMPREF0833_10163 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:scp03110]
D HMPREF0833_11357 ATPase family associated with various cellular activities (AAA) K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HMPREF0833_10072 clpC; negative regulator of genetic competence ClpC/MecB K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D HMPREF0833_11747 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D HMPREF0833_10579 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HMPREF0833_11881 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0833_11685 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0833_11883 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0833_11348 hslO; chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D HMPREF0833_11880 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF0833_11684 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF0833_11473 htrA; serine protease do-like HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF0833_11488 hflB; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF0833_10209 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF0833_11142 Gram-positive signal peptide protein, YSIRK family K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0833_11143 Gram-positive signal peptide protein, YSIRK family K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0833_11982 Gram-positive signal peptide protein, YSIRK family K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D HMPREF0833_11884 Gram-positive signal peptide protein, YSIRK family K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0833_11630 glycosyl hydrolase family 20, catalytic domain protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF0833_10950 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF0833_12021 Cof-like hydrolase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HMPREF0833_10195 putative foldase protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D HMPREF0833_10728 trxA; thioredoxin K03671 TXN; thioredoxin
D HMPREF0833_11784 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:scp04131]
D HMPREF0833_11059 SPFH/Band 7/PHB domain protein K07192 FLOT; flotillin
D HMPREF0833_11628 glycosyl hydrolase family 38 N-terminal domain protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF0833_11265 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0833_11895 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10093 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:scp03032]
D HMPREF0833_10089 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HMPREF0833_11475 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0833_11445 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0833_10539 toprim domain protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF0833_10243 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF0833_11053 hypothetical protein K03346 dnaB; replication initiation and membrane attachment protein
D HMPREF0833_11052 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D HMPREF0833_11674 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11136 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_10248 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0833_11769 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0833_11476 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0833_10176 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0833_10958 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0833_11239 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0833_10765 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0833_10524 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF0833_11219 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D HMPREF0833_11582 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0833_10320 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0833_10441 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0833_10840 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0833_10436 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HMPREF0833_10434 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HMPREF0833_10521 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:scp03036]
D HMPREF0833_10900 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF0833_11059 SPFH/Band 7/PHB domain protein K07192 FLOT; flotillin
D HMPREF0833_10089 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HMPREF0833_11475 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF0833_11361 ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D HMPREF0833_10899 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D HMPREF0833_11028 ScpA/B protein K05896 scpA; segregation and condensation protein A
D HMPREF0833_11027 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D HMPREF0833_10060 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HMPREF0833_11483 septum formation initiator K13052 divIC; cell division protein DivIC
D HMPREF0833_10848 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0833_10946 spoIIIE; stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF0833_11760 essC; type VII secretion protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF0833_11989 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D HMPREF0833_10059 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D HMPREF0833_10861 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D HMPREF0833_10847 putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HMPREF0833_10061 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0833_11374 glycosyl hydrolase family 25 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HMPREF0833_10839 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D HMPREF0833_10066 DivIVA domain protein K04074 divIVA; cell division initiation protein
D HMPREF0833_10063 hypothetical protein K09772 sepF; cell division inhibitor SepF
D HMPREF0833_11492 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HMPREF0833_11493 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D HMPREF0833_10843 cell cycle protein, FtsW/RodA/SpoVE family K05837 rodA; rod shape determining protein RodA
D HMPREF0833_11474 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF0833_10436 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HMPREF0833_10434 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HMPREF0833_11448 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HMPREF0833_11067 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF0833_10518 trmFO; tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HMPREF0833_11865 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HMPREF0833_10578 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D HMPREF0833_10239 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:scp03400]
D HMPREF0833_10954 putative methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HMPREF0833_10422 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF0833_10455 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF0833_10149 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF0833_10069 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0833_10619 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0833_10369 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0833_10423 mutX; mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0833_11692 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0833_10139 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0833_11351 hydrolase, NUDIX family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF0833_11319 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF0833_11405 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HMPREF0833_10926 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF0833_10152 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF0833_10790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF0833_10320 ligA; DNA ligase (NAD+) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF0833_11582 polA; DNA-directed DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF0833_11125 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D HMPREF0833_10624 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D HMPREF0833_10673 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D HMPREF0833_10256 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF0833_11648 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF0833_11649 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF0833_11612 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF0833_11890 rpoE; DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D HMPREF0833_12011 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF0833_11481 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0833_11410 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D HMPREF0833_11216 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HMPREF0833_11407 mutL; DNA mismatch repair domain protein K03572 mutL; DNA mismatch repair protein MutL
D HMPREF0833_10081 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF0833_10082 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF0833_10248 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF0833_11769 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF0833_11476 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF0833_10176 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF0833_10958 DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF0833_11239 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF0833_10765 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF0833_11674 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11136 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11221 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HMPREF0833_11402 recA; RecA protein K03553 recA; recombination protein RecA
D HMPREF0833_11406 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF0833_11524 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF0833_12012 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HMPREF0833_11317 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HMPREF0833_11465 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF0833_11101 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF0833_11500 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF0833_10156 recR; recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF0833_10086 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HMPREF0833_12002 recU; recombination protein U K03700 recU; recombination protein U
D HMPREF0833_10801 addA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D HMPREF0833_10802 rexB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D HMPREF0833_10400 cas1; CRISPR-associated endonuclease Cas1, DVULG subtype K15342 cas1; CRISP-associated protein Cas1
D HMPREF0833_10178 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D HMPREF0833_10441 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF0833_10840 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF0833_10521 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HMPREF0833_10089 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D HMPREF0833_11222 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HMPREF0833_10035 ImpB/MucB/SamB family protein K03502 umuC; DNA polymerase V
D HMPREF0833_11856 DNA-binding helix-turn-helix protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D HMPREF0833_10007 recX; regulatory protein RecX K03565 recX; regulatory protein
D HMPREF0833_10845 putative DnaQ family exonuclease/DinG family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HMPREF0833_10199 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF0833_10198 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF0833_10385 DHHA1 domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:scp03029]
D HMPREF0833_11976 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF0833_10306 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF0833_11363 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF0833_10859 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0833_11266 fusA; translation elongation factor G K02355 fusA; elongation factor G
D HMPREF0833_10927 era; ribosome biogenesis GTPase Era K03595 era; GTPase
D HMPREF0833_11646 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF0833_11721 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF0833_11426 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF0833_11412 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF0833_11093 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF0833_11092 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF0833_11094 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF0833_11674 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11136 single-strand binding family protein K03111 ssb; single-strand DNA-binding protein
D HMPREF0833_11881 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0833_11880 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF0833_11685 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0833_11684 groS; chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF0833_11883 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF0833_10707 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_10448 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_11283 putative OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11040 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:scp02000]
D HMPREF0833_10648 ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10647 ABC transporter, ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10533 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_11114 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10807 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10635 ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10532 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_11113 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10634 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10806 ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF0833_10931 ABC transporter, ATP-binding protein K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D HMPREF0833_10930 ABC transporter, ATP-binding protein K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D HMPREF0833_10585 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HMPREF0833_10711 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HMPREF0833_10712 putative spermidine/putrescine ABC transporter, permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D HMPREF0833_10713 ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D HMPREF0833_10714 potA; spermidine/putrescine ABC transporter, ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HMPREF0833_11729 ABC transporter, substrate-binding protein, QAT family K05845 opuC; osmoprotectant transport system substrate-binding protein
D HMPREF0833_11728 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF0833_11797 ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF0833_11419 mdxE; maltodextrin-binding protein MdxE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF0833_11420 ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0833_11421 ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF0833_10748 ABC transporter, solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF0833_10747 ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF0833_10746 ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF0833_11633 ABC transporter, solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D HMPREF0833_11631 ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D HMPREF0833_11632 putative protein LplC K17320 lplC; putative aldouronate transport system permease protein
D HMPREF0833_11675 sugar-binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D HMPREF0833_10655 basic membrane protein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF0833_10653 branched-chain amino acid ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF0833_10652 branched-chain amino acid ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D HMPREF0833_10654 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF0833_11536 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF0833_11678 ABC transporter, solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF0833_11537 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF0833_11538 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF0833_10267 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF0833_10268 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF0833_10269 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF0833_10270 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0833_10271 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF0833_10632 ABC transporter, permease protein K10036 glnH; glutamine transport system substrate-binding protein
D HMPREF0833_10633 artM; arginine ABC transporter, ATP-binding protein ArtM K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0833_11085 ABC transporter, substrate-binding protein, family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
D HMPREF0833_11993 ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D HMPREF0833_11994 artM; arginine ABC transporter, ATP-binding protein ArtM K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0833_11737 ABC transporter, substrate-binding protein, family 3 K16957 tcyK; L-cystine transport system substrate-binding protein
D HMPREF0833_11738 ABC transporter, permease protein K16958 tcyL; L-cystine transport system permease protein
D HMPREF0833_11739 ABC transporter, permease protein K16959 tcyM; L-cystine transport system permease protein
D HMPREF0833_11740 glnQ; glutamine ABC transporter, ATP-binding protein GlnQ K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0833_10966 receptor family ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF0833_10965 branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF0833_10964 branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF0833_10963 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF0833_10962 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF0833_11084 putative D-methionine-binding lipoprotein MetQ K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF0833_11081 metI; D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D HMPREF0833_11082 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF0833_10828 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D HMPREF0833_10986 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D HMPREF0833_11314 branched-chain amino acid ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D HMPREF0833_10985 branched-chain amino acid ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D HMPREF0833_11313 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D HMPREF0833_10984 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D HMPREF0833_11923 ABC transporter, permease protein K17073 lysX1; putative lysine transport system substrate-binding protein
D HMPREF0833_11922 artM; arginine ABC transporter, ATP-binding protein ArtM K17076 lysY; putative lysine transport system ATP-binding protein
D HMPREF0833_10254 ABC transporter, substrate-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF0833_10252 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF0833_10253 glnQ; glutamine ABC transporter, ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF0833_10150 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10730 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_10130 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11720 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11934 sarA; oligopeptide-binding protein SarA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF0833_11935 ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D HMPREF0833_11936 putative oligopeptide ABC transporter, permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D HMPREF0833_11937 oppD; oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF0833_11938 oppF; oligopeptide ABC transporter, ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF0833_11011 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF0833_11623 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF0833_10099 ABC transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF0833_11622 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D HMPREF0833_11621 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HMPREF0833_11706 fimA; manganese ABC transporter substrate-binding lipoprotein K19971 psaA; manganese/zinc transport system substrate-binding protein
D HMPREF0833_11707 mtsC; metal ion ABC transporter, permease protein K19972 psaC; manganese/zinc transport system permease protein
D HMPREF0833_11708 mntA; manganese transport system ATP-binding protein MntA K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D HMPREF0833_10278 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D HMPREF0833_11184 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D HMPREF0833_11078 hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D HMPREF0833_11080 conserved hypothetical protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D HMPREF0833_11356 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D HMPREF0833_11070 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0833_11183 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0833_11457 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF0833_11182 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11459 ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11181 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11458 ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11071 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF0833_11643 ABC-2 type transporter K11051 cylB; multidrug/hemolysin transport system permease protein
D HMPREF0833_11642 putative daunorubicin/doxorubicin resistance ATP-binding protein DrrA K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D HMPREF0833_10754 efflux ABC transporter, permease protein K09813 hrtB; hemin transport system permease protein
D HMPREF0833_10755 ABC transporter, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF0833_10106 efflux ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D HMPREF0833_10129 hypothetical protein K19084 braE; bacitracin transport system permease protein
D HMPREF0833_10105 putative bacteriocin export ABC transporter, lactococcin 972 group K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF0833_10128 putative bacteriocin export ABC transporter, lactococcin 972 group K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF0833_10868 efflux ABC transporter, permease protein K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D HMPREF0833_10869 ABC transporter, ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF0833_10847 putative cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D HMPREF0833_10848 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF0833_11901 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D HMPREF0833_11900 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein
D HMPREF0833_11899 ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D HMPREF0833_11969 bacterial ABC transporter protein EcsB K25157 ecsB; ABC-2 type transport system permease protein
D HMPREF0833_11968 ecsA; ABC transporter, ATP-binding protein EcsA K25158 ecsA; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10815 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_10723 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_11832 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_10297 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_10277 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_10353 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_11189 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_11689 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_11913 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF0833_11188 putative bacitracin ABC transporter, ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10617 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10298 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10816 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10246 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_11833 putative bacitracin ABC transporter, ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10724 putative ABC transporter, ATP-binding protein EcsA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10276 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10354 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10627 putative mutacin ABC transporter, ATP-binding protein MutF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_11688 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_11912 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF0833_10914 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0833_10758 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0833_10760 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0833_10138 efflux ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0833_10509 bacteriocin-associated integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0833_11862 bacteriocin-associated integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF0833_10812 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0833_10915 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0833_10508 putative bacteriocin export ABC transporter, lactococcin 972 group K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0833_10759 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0833_10137 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0833_11861 putative bacteriocin export ABC transporter, lactococcin 972 group K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF0833_11928 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HMPREF0833_10485 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D HMPREF0833_10462 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0833_11571 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF0833_10772 transporter, major facilitator family protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D HMPREF0833_11556 transporter, major facilitator family protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D HMPREF0833_10924 transporter, major facilitator family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D HMPREF0833_10878 transporter, major facilitator family protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D HMPREF0833_10224 transporter, major facilitator family protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D HMPREF0833_10202 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF0833_10201 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HMPREF0833_11056 PTS system IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D HMPREF0833_11118 PTS system sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF0833_10981 treP; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HMPREF0833_10590 putative PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF0833_10689 lacF; lactose-specific phosphotransferase enzyme IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF0833_10688 PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF0833_10342 PTS system, Lactose/Cellobiose specific IIA subunit K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_11713 putative N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_10340 licB; lichenan-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_11714 PTS system, Lactose/Cellobiose specific IIB subunit K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF0833_10341 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_10124 PTS system, lactose/cellobiose family IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_11715 putative PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF0833_10697 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D HMPREF0833_10696 hypothetical protein K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D HMPREF0833_10695 PTS system Galactitol-specific IIC component K20114 gatC; galactose PTS system EIIC component
D HMPREF0833_11959 putative PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF0833_11521 PTS system fructose IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF0833_11681 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11519 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11958 manY; mannose permease IIC component K02795 manY; mannose PTS system EIIC component
D HMPREF0833_11520 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D HMPREF0833_11957 putative mannose permease IID component K02796 manZ; mannose PTS system EIID component
D HMPREF0833_11679 PTS system fructose IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HMPREF0833_11245 gla; glycerol facilitator-aquaporin K02440 glpF; glycerol uptake facilitator
D HMPREF0833_10242 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D HMPREF0833_11212 transporter, small conductance mechanosensitive ion channel MscS family protein K22044 ybiO; moderate conductance mechanosensitive channel
D HMPREF0833_11126 CorA-like protein K03284 corA; magnesium transporter
D HMPREF0833_10987 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF0833_11243 LrgA family protein K06518 cidA; holin-like protein
D HMPREF0833_10547 amino acid permease K20265 gadC; glutamate:GABA antiporter
D HMPREF0833_11174 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HMPREF0833_10778 metal cation transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D HMPREF0833_11213 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D HMPREF0833_11016 transporter, CPA2 family K24163 nhaK; monovalent cation/hydrogen antiporter
D HMPREF0833_11164 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D HMPREF0833_11024 cation transport protein K03498 trkH; trk/ktr system potassium uptake protein
D HMPREF0833_11163 TrkA N-terminal domain protein K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF0833_11023 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF0833_11567 pyrP; uracil permease K02824 uraA; uracil permease
D HMPREF0833_10484 pbuX; xanthine permease K16169 pbuX; xanthine permease
D HMPREF0833_11962 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D HMPREF0833_10472 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF0833_10409 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF0833_10393 chloride transporter, ClC family K03281 clcA; chloride channel protein, CIC family
D HMPREF0833_10916 putative iron transporter SMF3 K03322 mntH; manganese transport protein
D HMPREF0833_11978 Na/Pi-cotransporter II-like protein K03324 yjbB; phosphate:Na+ symporter
D HMPREF0833_11178 transporter, auxin efflux carrier (AEC) family protein K24180 mleP; malate permease and related proteins
D HMPREF0833_11248 putative azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump
D HMPREF0833_11247 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D HMPREF0833_11021 hypothetical protein K23675 fmnP; riboflavin transporter
D HMPREF0833_10122 membrane protein K22736 VIT; vacuolar iron transporter family protein
D HMPREF0833_11450 membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D HMPREF0833_10861 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D HMPREF0833_10475 FTR1 family protein K07243 FTR; high-affinity iron transporter
D HMPREF0833_10473 Imelysin K07224 efeO; iron uptake system component EfeO
D HMPREF0833_10474 Tat-translocated enzyme K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D HMPREF0833_10466 cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D HMPREF0833_10041 cytochrome C biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D HMPREF0833_10870 efflux transporter, RND family, MFP subunit K24950 yknX; membrane fusion protein, antimicrobial resistance system
D HMPREF0833_11385 cpsD; tyrosine-protein kinase CpsD K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D HMPREF0833_11386 polysaccharide export protein, MPA1 family K19420 epsA; protein tyrosine kinase modulator
D HMPREF0833_11352 pnuC; nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D HMPREF0833_10822 FeoA domain protein K04758 feoA; ferrous iron transport protein A
D HMPREF0833_10823 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:scp02044]
D HMPREF0833_10064 YGGT family protein K02221 yggT; YggT family protein
D HMPREF0833_10173 comEA protein K02237 comEA; competence protein ComEA
D HMPREF0833_10309 putative ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF0833_10174 DNA internalization competence protein ComEC/Rec2-like protein K02238 comEC; competence protein ComEC
D HMPREF0833_10003 putative ComF operon protein 1 K02240 comFA; competence protein ComFA
D HMPREF0833_10004 comF family protein K02242 comFC; competence protein ComFC
D HMPREF0833_11655 putative ComG operon protein 1 K02243 comGA; competence protein ComGA
D HMPREF0833_11656 bacterial type II secretion system domain protein F K02244 comGB; competence protein ComGB
D HMPREF0833_11657 prepilin-type cleavage/methylation N-terminal domain protein K02245 comGC; competence protein ComGC
D HMPREF0833_11658 prepilin-type cleavage/methylation N-terminal domain protein K02246 comGD; competence protein ComGD
D HMPREF0833_11660 hypothetical protein K02248 comGF; competence protein ComGF
D HMPREF0833_10051 bacterial peptidase A24, N-terminal domain protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF0833_11293 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_11105 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF0833_11367 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D HMPREF0833_10923 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D HMPREF0833_11607 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_11297 secY2; accessory Sec system translocase SecY2 K03076 secY; preprotein translocase subunit SecY
D HMPREF0833_10504 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF0833_10896 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF0833_11750 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF0833_11283 putative OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11040 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF0833_11296 asp1; accessory Sec system protein Asp1 K12268 asp1; accessory secretory protein Asp1
D HMPREF0833_11295 asp2; accessory Sec system protein Asp2 K12269 asp2; accessory secretory protein Asp2
D HMPREF0833_11294 asp3; accessory Sec system protein Asp3 K12270 asp3; accessory secretory protein Asp3
D HMPREF0833_10477 tatA; twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D HMPREF0833_10476 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:scp02042]
D HMPREF0833_11286 C4-dicarboxylate transporter/malic acid transport protein K11041 eta; exfoliative toxin A/B
D HMPREF0833_10987 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF0833_10644 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:scp02022]
D HMPREF0833_10903 putative sensor protein kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D HMPREF0833_10904 walR; transcriptional regulatory protein WalR K07668 vicR; two-component system, OmpR family, response regulator VicR
D HMPREF0833_10103 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D HMPREF0833_10102 graR; response regulator protein GraR K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D HMPREF0833_10281 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF0833_10280 putative response regulator ArlR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HMPREF0833_10630 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D HMPREF0833_10628 response regulator receiver domain protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D HMPREF0833_10629 transcriptional regulatory protein, C-terminal domain protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D HMPREF0833_11914 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF0833_11915 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR
D HMPREF0833_12019 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D HMPREF0833_12020 vraR; response regulator protein VraR K11618 liaR; two-component system, NarL family, response regulator LiaR
D HMPREF0833_11687 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF0833_11686 LytTr DNA-binding domain protein K07707 agrA; two-component system, LytTR family, response regulator AgrA
D HMPREF0833_11471 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF0833_11470 LytTr DNA-binding domain protein K12295 comE; two-component system, LytTR family, response regulator ComE
D HMPREF0833_11644 LytTr DNA-binding domain protein K02477 K02477; two-component system, LytTR family, response regulator
D HMPREF0833_11635 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF0833_10046 cache domain protein K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF0833_11636 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
D HMPREF0833_10045 response regulator receiver domain protein K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:scp02035]
D HMPREF0833_11085 ABC transporter, substrate-binding protein, family 3 K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:scp04812]
D HMPREF0833_10061 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0833_10060 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HMPREF0833_11474 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:scp04147]
D HMPREF0833_10835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF0833_11265 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF0833_11263 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF0833_10250 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF0833_10950 peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF0833_11059 SPFH/Band 7/PHB domain protein K07192 FLOT; flotillin
D HMPREF0833_11685 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF0833_11881 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF0833_11340 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF0833_11466 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF0833_10859 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF0833_11967 hit; protein hit K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF0833_10119 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_10440 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF0833_11608 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF0833_10787 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF0833_11581 Alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF0833_11359 Gram-positive signal peptide protein, YSIRK family K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF0833_10742 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF0833_10203 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF0833_10381 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF0833_11260 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF0833_11508 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF0833_10511 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF0833_10895 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF0833_10858 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF0833_11895 phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF0833_10093 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:scp02048]
D HMPREF0833_10400 cas1; CRISPR-associated endonuclease Cas1, DVULG subtype K15342 cas1; CRISP-associated protein Cas1
D HMPREF0833_10401 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D HMPREF0833_10395 CRISPR-associated endonuclease Cas3-HD K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D HMPREF0833_10399 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D HMPREF0833_10397 csd1; CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D HMPREF0833_10398 hypothetical protein K19118 csd2; CRISPR-associated protein Csd2
D HMPREF0833_10396 cas5d; CRISPR-associated protein Cas5, Dvulg subtype K19119 cas5d; CRISPR-associated protein Cas5d
D HMPREF0833_10111 hsdR; type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HMPREF0833_10113 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF0833_10112 putative type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HMPREF0833_11128 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HMPREF0833_11662 hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HMPREF0833_11772 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HMPREF0833_11771 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D HMPREF0833_10031 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D HMPREF0833_10030 prevent-host-death family protein K19159 yefM; antitoxin YefM
D HMPREF0833_10357 addiction module toxin, RelE/StbE family K19092 parE1_3_4; toxin ParE1/3/4
D HMPREF0833_10372 putative toxin-antitoxin system, toxin component, Fic family K07341 doc; death on curing protein
D HMPREF0833_10117 higA; addiction module antidote protein HigA K21498 higA-1; antitoxin HigA-1
D HMPREF0833_10061 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF0833_10436 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HMPREF0833_10434 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HMPREF0833_10707 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF0833_10448 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:scp04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:scp04090]
C 01504 Antimicrobial resistance genes [BR:scp01504]
D HMPREF0833_10347 acetyltransferase, GNAT family K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D HMPREF0833_10435 streptomycin adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D HMPREF0833_10931 ABC transporter, ATP-binding protein K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D HMPREF0833_10930 ABC transporter, ATP-binding protein K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D HMPREF0833_10224 transporter, major facilitator family protein K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D HMPREF0833_11308 chloramphenicol O-acetyltransferase domain protein K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D HMPREF0833_11878 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_10663 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF0833_11431 dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF0833_11430 dltB; protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF0833_11429 dltC; D-alanine--poly(phosphoribitol) ligase, subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF0833_11428 DltD C-terminal domain protein K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:scp00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:scp03100]
D HMPREF0833_t10001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF0833_t10016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10013 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF0833_t10021 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0833_t10061 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF0833_t10003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0833_t10027 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF0833_t10020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF0833_t10015 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0833_t10055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF0833_t10022 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0833_t10024 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0833_t10048 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF0833_t10007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10041 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10046 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF0833_t10054 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF0833_t10042 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0833_t10047 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF0833_t10005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10032 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10058 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF0833_t10004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0833_t10028 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0833_t10057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF0833_t10036 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10037 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10039 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10050 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF0833_t10040 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0833_t10051 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF0833_t10011 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0833_t10035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF0833_t10038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10049 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF0833_t10059 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10017 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF0833_t10053 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF0833_t10014 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0833_t10052 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF0833_t10002 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0833_t10026 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0833_t10045 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF0833_r10001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF0833_r10002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF0833_r10012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_r10009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF0833_n10016 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF0833_n10026 Bacterial RNase P class B K01978 rnpB; M1 RNA
D HMPREF0833_n10004 tmRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HMPREF0833_11205 msrB; methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HMPREF0833_10044 msrB; methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HMPREF0833_10782 glutathione S-transferase, C-terminal domain protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HMPREF0833_11705 redoxin family protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HMPREF0833_10240 pyridine nucleotide-disulfide oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HMPREF0833_11818 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D HMPREF0833_11389 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HMPREF0833_11710 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF0833_10978 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF0833_10919 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D HMPREF0833_12005 hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D HMPREF0833_10548 argF; ornithine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D HMPREF0833_10825 putative protease synthase and sporulation negative regulatory protein PAI 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D HMPREF0833_11693 acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D HMPREF0833_11166 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D HMPREF0833_10884 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HMPREF0833_10470 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HMPREF0833_11908 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D HMPREF0833_10703 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D HMPREF0833_10230 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D HMPREF0833_10885 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D HMPREF0833_11310 putative esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D HMPREF0833_11387 cpsB; protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D HMPREF0833_10021 yqeG; HAD phosphatase, family IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D HMPREF0833_11447 DHHA1 domain protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D HMPREF0833_11279 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HMPREF0833_11278 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D HMPREF0833_11160 dexB; glucan 1,6-alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D HMPREF0833_10732 hypothetical protein K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-]
D HMPREF0833_10189 serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D HMPREF0833_11719 serine-type D-Ala-D-Ala carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D HMPREF0833_11116 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF0833_11776 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF0833_10283 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HMPREF0833_10236 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HMPREF0833_10076 YjeF domain protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D HMPREF0833_10851 putative potassium/sodium efflux P-type ATPase, fungal-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HMPREF0833_10970 mgtA; magnesium-importing ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D HMPREF0833_10944 E1-E2 ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D HMPREF0833_10171 E1-E2 ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D HMPREF0833_10961 CBS domain protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D HMPREF0833_10303 fer; ferredoxin K05337 fer; ferredoxin
D HMPREF0833_11931 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D HMPREF0833_10260 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D HMPREF0833_10588 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
D HMPREF0833_10088 EDD domain protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D HMPREF0833_11413 putative nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
D HMPREF0833_10219 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
D HMPREF0833_10366 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
D HMPREF0833_10116 hypothetical protein K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D HMPREF0833_10945 glyoxalase family protein K08234 yaeR; glyoxylase I family protein
D HMPREF0833_10062 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HMPREF0833_10263 putative regulatory protein spx K16509 spxA; regulatory protein spx
D HMPREF0833_11401 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D HMPREF0833_10890 Tex-like protein N-terminal domain protein K06959 tex; protein Tex
C 99974 Translation
D HMPREF0833_12022 S1 RNA binding domain protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D HMPREF0833_11889 tig; trigger factor K03545 tig; trigger factor
D HMPREF0833_10921 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HMPREF0833_10200 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D HMPREF0833_11926 negative regulator of genetic competence (MecA) K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D HMPREF0833_10444 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HMPREF0833_11272 RmuC domain protein K09760 rmuC; DNA recombination protein RmuC
D HMPREF0833_10168 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D HMPREF0833_10522 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D HMPREF0833_10785 DnaD domain protein K02086 dnaD; DNA replication protein
D HMPREF0833_11846 DNA-binding helix-turn-helix protein K07467 nicK; putative DNA relaxase
D HMPREF0833_11690 ATPase, AAA family K07478 ycaJ; putative ATPase
D HMPREF0833_10761 hypothetical protein K07482 K07482; transposase, IS30 family
D HMPREF0833_11490 ISSag3, transposase family protein K07482 K07482; transposase, IS30 family
D HMPREF0833_11013 transposase K07485 K07485; transposase
D HMPREF0833_10983 transposase-like protein K07491 rayT; REP-associated tyrosine transposase
D HMPREF0833_11228 transposase-like protein K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D HMPREF0833_11241 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HMPREF0833_10570 gph; glycoside/pentoside/hexuronide transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D HMPREF0833_11986 putative D-serine/D-alanine/glycine transporter K03293 TC.AAT; amino acid transporter, AAT family
D HMPREF0833_10134 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HMPREF0833_11214 agcS; amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HMPREF0833_10465 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D HMPREF0833_12006 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D HMPREF0833_11282 R3H domain protein K06346 jag; spoIIIJ-associated protein
D HMPREF0833_11090 hypothetical protein K06349 kbaA; KinB signaling pathway activation protein
C 99993 Cell motility
C 99995 Signaling proteins
D HMPREF0833_10055 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HMPREF0833_11874 ACT domain protein K07166 K07166; ACT domain-containing protein
D HMPREF0833_10935 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D HMPREF0833_10863 glycosyl hydrolase family 25 K07273 acm; lysozyme
D HMPREF0833_10664 hypothetical protein K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D HMPREF0833_10272 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D HMPREF0833_10650 putative copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D HMPREF0833_11561 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HMPREF0833_10192 competence protein CoiA-like protein K06198 coiA; competence protein CoiA
D HMPREF0833_11673 tRNA binding domain protein K06878 K06878; tRNA-binding protein
D HMPREF0833_10614 HAD hydrolase, family IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D HMPREF0833_11932 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HMPREF0833_11929 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D HMPREF0833_10315 YihY family protein K07058 K07058; membrane protein
D HMPREF0833_11074 rhodanese-like protein K07146 K07146; UPF0176 protein
D HMPREF0833_11066 LemA family protein K03744 lemA; LemA protein
D HMPREF0833_10529 LemA family protein K03744 lemA; LemA protein
D HMPREF0833_10889 metallopeptidase, SprT family K03095 sprL; SprT-like protein
D HMPREF0833_11438 YhgE/Pip domain protein K01421 yhgE; putative membrane protein
D HMPREF0833_10893 TIGR03943 family protein K08986 ycgQ; putative membrane protein
D HMPREF0833_11574 hypothetical protein K08987 K08987; putative membrane protein
D HMPREF0833_10613 putative alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D HMPREF0833_11344 radical SAM domain protein K06871 K06871; uncharacterized protein
D HMPREF0833_10853 HD domain protein K06885 K06885; uncharacterized protein
D HMPREF0833_11170 dienelactone hydrolase domain family protein K06889 K06889; uncharacterized protein
D HMPREF0833_11036 hypothetical protein K06890 K06890; uncharacterized protein
D HMPREF0833_11583 CoA binding domain protein K06929 K06929; uncharacterized protein
D HMPREF0833_10601 hypothetical protein K06940 K06940; uncharacterized protein
D HMPREF0833_11037 HDIG domain protein K06950 K06950; uncharacterized protein
D HMPREF0833_10720 HD domain protein K06950 K06950; uncharacterized protein
D HMPREF0833_10598 KH domain protein K06960 K06960; uncharacterized protein
D HMPREF0833_11802 hypothetical protein K06962 K06962; uncharacterized protein
D HMPREF0833_10979 LPXTG-motif cell wall anchor domain protein K07004 K07004; uncharacterized protein
D HMPREF0833_11369 putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D HMPREF0833_10892 putative permease K07089 K07089; uncharacterized protein
D HMPREF0833_11816 putative permease K07089 K07089; uncharacterized protein
D HMPREF0833_11031 phosphodiesterase family protein K07095 K07095; uncharacterized protein
D HMPREF0833_10793 oxidoreductase, short chain dehydrogenase/reductase family protein K07124 K07124; uncharacterized protein
D HMPREF0833_11019 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D HMPREF0833_11201 hypothetical protein K07150 K07150; uncharacterized protein
D HMPREF0833_11025 conserved hypothetical protein YidD K08998 K08998; uncharacterized protein
D HMPREF0833_10012 hemerythrin HHE cation binding domain protein K09155 K09155; uncharacterized protein
D HMPREF0833_11875 hypothetical protein K09157 K09157; uncharacterized protein
D HMPREF0833_11627 hypothetical protein K09704 K09704; uncharacterized protein
D HMPREF0833_10503 helix-turn-helix protein, YlxM/p13 family K09787 K09787; uncharacterized protein
D HMPREF0833_10901 hypothetical protein K09790 K09790; uncharacterized protein
D HMPREF0833_10937 hypothetical protein K00243 K00243; uncharacterized protein
D HMPREF0833_10642 hypothetical protein K09861 K09861; uncharacterized protein
D HMPREF0833_10377 hypothetical protein K09925 K09925; uncharacterized protein
D HMPREF0833_11525 hypothetical protein K09962 K09962; uncharacterized protein
D HMPREF0833_11152 hypothetical protein K09975 K09975; uncharacterized protein
D HMPREF0833_11034 hypothetical protein K09976 K09976; uncharacterized protein
D HMPREF0833_10700 hypothetical protein K07584 ysxB; uncharacterized protein
D HMPREF0833_10006 hypothetical protein K07586 ygaC; uncharacterized protein
D HMPREF0833_11974 hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 24, 2024