+E Transcription factors KO
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Transcription Factors - Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D SCAT_2927 putative DNA-methyltransferase Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SCAT_3528 Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D SCAT_p0326 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K07506 K07506; AraC family transcriptional regulator
D SCAT_4744 ada; putative regulatory protein ada [Includes: Methylated-DNA--protein-cysteine methyltransferase] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SCAT_2707 Putative regulatory protein ada [Includes: Methylated-DNA--protein-cysteine methyltransferase] (fragment) K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SCAT_p1524 putative AraC-family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D SCAT_3900 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SCAT_0172 cynR; HTH-type transcriptional regulator cynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
C DeoR family
D SCAT_p0442 Transcriptional regulator of sugar metabolism K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D SCAT_0436 Transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D SCAT_p0028 rbsR; putative LacI-family transcriptional regulator, ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCAT_p1065 putative LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCAT_0811 putative LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCAT_2554 conserved protein of unknown function K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCAT_1844 LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D SCAT_4090 dasR; HTH-type transcriptional repressor dasR K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D SCAT_0918 GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SCAT_1912 dasR; HTH-type transcriptional repressor dasR K03710 K03710; GntR family transcriptional regulator
D SCAT_3041 Putative GntR-family regulatory protein (fragment) K03710 K03710; GntR family transcriptional regulator
D SCAT_2226 putative GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SCAT_2991 korSA; putative regulatory protein KorSA, GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SCAT_3543 Transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SCAT_p1701 putative GntR-family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SCAT_5469 Transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D SCAT_0727 putative tetR-family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SCAT_1325 conserved protein of unknown function K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SCAT_p0651 putative tetR-family regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SCAT_1831 TetR-family regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SCAT_5257 putative tetR-family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D SCAT_1410 TetR-family regulatory protein K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D SCAT_5621 TetR-family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
C Lrp/AsnC family
D SCAT_4462 putative AsnC-family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D SCAT_3452 putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SCAT_p0231 Transcriptional regulator protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SCAT_5390 putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D SCAT_1411 amfR; putative two-component system response regulator K24912 ramR; LuxR family transcriptional regulator, transcriptional activator for aerial hyphae formation
C MarR family
D SCAT_p0216 putative Transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D SCAT_0453 putative Transcriptional regulator, MarR family K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SCAT_p0711 ohrR; transcriptional regulator sensing organic peroxides K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D SCAT_4982 soxR; HTH-type transcriptional activator soxR homolog K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D SCAT_1828 soxR; Redox-sensitive transcriptional activator soxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D SCAT_3311 hspR; putative heat shock protein hspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D SCAT_2951 tipA; HTH-type transcriptional activator tipA K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D SCAT_2661 tipA; HTH-type transcriptional activator tipA K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D SCAT_p0336 Nodulation protein nolA (fragment) K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
C Fur family
D SCAT_2542 Iron uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SCAT_1573 Metal uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SCAT_p0560 putative Fe regulatory protein K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D SCAT_p0425 catR; putative hydrogen peroxide sensitive repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D SCAT_4070 Hydrogen peroxide sensitive repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
C IclR family
D SCAT_4785 IclR-family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D SCAT_0672 putative IclR-family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
C CRP/FNR family
D SCAT_2956 Transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SCAT_2881 Cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
D SCAT_0232 nsrR; HTH-type transcriptional repressor nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D SCAT_2844 putative ArsR-family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SCAT_2849 conserved protein of unknown function K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SCAT_2509 putative ArsR-family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SCAT_p0803 putative regulatory protein K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
C XRE family
D SCAT_4534 conserved protein of unknown function K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
C Other families
D SCAT_2396 ideR; Iron-dependent repressor ideR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D SCAT_3821 putative ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SCAT_4466 putative Transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D SCAT_3424 rex; Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor
D SCAT_p0262 conserved protein of unknown function K27097 espR; ESX-1-secreted protein regulator
D SCAT_3287 Helix-turn-helix protein K27097 espR; ESX-1-secreted protein regulator
D SCAT_p1288 conserved protein of unknown function K27097 espR; ESX-1-secreted protein regulator
D SCAT_2813 conserved protein of unknown function K27097 espR; ESX-1-secreted protein regulator
D SCAT_5001 conserved protein of unknown function K27097 espR; ESX-1-secreted protein regulator
D SCAT_p1364 conserved protein of unknown function K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D SCAT_0280 conserved protein of unknown function K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_0517 Transcription factor WhiB (modular protein) K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_3655 wblB; putative WhiB-family transcriptional regulator; role in cell cycle control K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_2040 whiB-Stv; WhiB-Stv protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_3913 wblI; putative WhiB-family transcriptional regulator; role in cell cycle control K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_2809 putative prophage protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_2888 wblA; putative WhiB-family transcriptional regulator; role in cell cycle control K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_4097 wblE; putative WhiB-family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_4053 WhiB-family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D SCAT_2741 conserved protein of unknown function K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SCAT_2578 conserved protein of unknown function K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SCAT_4467 Transcriptional regulator, CdaR family K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D SCAT_5678 ccaR; Positive regulator K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D SCAT_p0155 Transcriptional regulator (modular protein) K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D SCAT_p0840 thnU; Transcriptional regulator K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon
D SCAT_3126 ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCAT_p0933 protein of unknown function K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCAT_2488 Transcriptional factor regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D SCAT_5249 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SCAT_1597 hrcA; Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D SCAT_p1526 putative regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D SCAT_5336 pyrR; transcriptional attenuator and uracil phosphoribosyltransferase activity K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SCAT_0693 conserved protein of unknown function K07734 paiB; transcriptional regulator
D SCAT_1972 conserved protein of unknown function K07735 algH; putative transcriptional regulator
D SCAT_1191 putative DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D SCAT_4577 nrdR; Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D SCAT_1211 mraZ; putative protein involved in cell division or replication K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0