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Transcription Machinery - Streptomyces sp. CdTB01
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
E AS200_25525 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E AS200_20155 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E AS200_20345 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E AS200_20340 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E AS200_36295 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E AS200_12945 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
E AS200_30235 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor
E AS200_25370 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_02490 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_19255 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_19365 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_21415 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_29145 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_17740 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_17665 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_17760 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_34775 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_23505 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_37365 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_08735 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_19930 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_27650 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_07825 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_31370 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_12625 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_39520 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_40565 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_18125 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_25860 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_02945 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_41690 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_40505 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_05950 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_24705 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_33550 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_01530 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_03985 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_26235 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_19375 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E AS200_00180 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_01965 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_02655 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_40545 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_43690 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_10585 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_17515 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_27090 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_41045 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_41205 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_40705 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_24070 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_24075 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_41760 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_04935 RNA polymerase subunit sigma K03090 sigB; RNA polymerase sigma-B factor
E AS200_14025 RNA polymerase subunit sigma-70 K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E AS200_13635 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E AS200_36235 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
E AS200_20380 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E AS200_04645 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E AS200_41085 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E AS200_04640 anti-anti-sigma factor K17762 rsbS; rsbT antagonist protein RsbS
E AS200_41090 anti-anti-sigma factor K17762 rsbS; rsbT antagonist protein RsbS
E AS200_04635 hypothetical protein K17763 rsbR; rsbT co-antagonist protein RsbR
E AS200_41095 hypothetical protein K17763 rsbR; rsbT co-antagonist protein RsbR
E AS200_04595 histidine kinase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E AS200_39875 hypothetical protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E AS200_04590 sigma factor sigB regulation protein rsbQ K19707 rsbQ; sigma-B regulation protein RsbQ
E AS200_03435 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
E AS200_22115 anti-sigma B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E AS200_04500 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E AS200_41135 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
E AS200_39715 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
E AS200_00785 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E AS200_03520 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
E AS200_06185 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E AS200_06480 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E AS200_04600 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E AS200_04900 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E AS200_17510 anti-sigma regulatory factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E AS200_23830 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E AS200_04910 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E AS200_03500 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
E AS200_03495 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
E AS200_44145 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
E AS200_32530 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
E AS200_18895 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E AS200_39505 transcription termination factor Rho K03628 rho; transcription termination factor Rho
E AS200_16710 transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024