+D GENES KO
#
KEGG Orthology (KO) - Saccharophagus degradans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sde00010]
D Sde_1018 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Sde_1006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Sde_0935 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Sde_1278 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Sde_3278 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Sde_1277 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_3279 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_3277 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_0693 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_2717 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_1379 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Sde_0473 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Sde_2062 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Sde_0494 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Sde_1245 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Sde_1308 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Sde_3872 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Sde_2573 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Sde_2572 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_0052 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Sde_3956 Alcohol dehydrogenase GroES-like protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D Sde_1067 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Sde_1187 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Sde_0788 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Sde_2037 HAD-superfamily hydrolase subfamily IA, variant 3 K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D Sde_1254 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_1468 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D Sde_0992 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:sde00020]
D Sde_2111 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Sde_1991 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Sde_1893 aconitase / transcriptional regulator, XRE family K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Sde_1684 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Sde_2106 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Sde_2105 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_2102 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Sde_2103 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Sde_2108 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Sde_2107 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Sde_2110 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Sde_2109 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Sde_0888 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Sde_1992 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Sde_1659 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Sde_0992 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Sde_2573 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Sde_2572 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:sde00030]
D Sde_1006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Sde_1380 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Sde_1446 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D Sde_0635 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Sde_0746 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Sde_0472 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Sde_0775 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Sde_1485 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Sde_3387 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Sde_0612 protein of unknown function DUF1124, sugar phosphate isomerase putative K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Sde_1254 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_3256 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Sde_1381 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D Sde_1382 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Sde_0904 gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D Sde_3280 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Sde_1269 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Sde_0939 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Sde_2656 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Sde_1277 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_3279 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_1278 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Sde_3278 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Sde_0935 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:sde00040]
D Sde_0944 ces8B; pectin methylesterase-like protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Sde_3448 pel1D; putative pectin/pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_0942 pel1C; putative pectin/pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_0943 pel1A; putative pectin/pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_3447 pes8A; pectin methylesterase-like protein K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_3283 Cupin 2, conserved barrel K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D Sde_1280 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D Sde_0950 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D Sde_1283 short-chain dehydrogenase/reductase SDR K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Sde_2646 short-chain dehydrogenase/reductase SDR K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Sde_1272 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Sde_0940 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Sde_1273 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Sde_1891 D-mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Sde_1064 mandelate racemase/muconate lactonizing enzyme K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D Sde_0941 Mannitol dehydrogenase-like protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D Sde_2632 gly2D; putative retaining b-glycosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Sde_2115 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Sde_1000 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Sde_0773 L-ribulose-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Sde_0746 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Sde_0774 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D Sde_0772 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D Sde_2505 carbohydrate kinase, FGGY K00854 xylB; xylulokinase [EC:2.7.1.17]
D Sde_2504 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Sde_0771 transcriptional regulator, GntR family K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D Sde_0761 short-chain dehydrogenase/reductase SDR K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
C 00051 Fructose and mannose metabolism [PATH:sde00051]
D Sde_3691 man26A; putative endo-b-1,4-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_0064 man5N; putative mannan endo-1,4-b-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_0656 man5O; putative mannan endo-1,4-b-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_2541 man5Q; putative retaining b-glycosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_0509 man5P; b-mannosidase-like protein K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_2639 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Sde_3962 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Sde_1001 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_2134 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Sde_2117 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Sde_2116 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Sde_3208 HAD-superfamily hydrolase YedP K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D Sde_0935 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Sde_1278 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Sde_3278 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Sde_2504 D-xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Sde_3285 ply6E; putative polysaccharide lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D Sde_3274 ply6D; putative polysaccharide lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D Sde_3275 ply6C; putative polysaccharide lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D Sde_0034 ply6F; polysaccharide lyase-like protein K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D Sde_1277 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_3279 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_3277 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_0693 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_2717 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_0612 protein of unknown function DUF1124, sugar phosphate isomerase putative K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:sde00052]
D Sde_1187 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Sde_0788 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Sde_1097 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Sde_1098 UTP-hexose-1-phosphate uridylyltransferase / UDP-glucose-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Sde_0734 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Sde_1000 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Sde_1254 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_1018 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Sde_2935 gal2C; putative b-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_3882 gal2A; beta-galactosidase. Glycosyl Hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_0684 gly2E; putative retaining b-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1285 gly2C; putative retaining b-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1177 gal2B; putative b-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1593 agl27A; putative a-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Sde_0935 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Sde_2360 gly97B; a-glucosidase-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Sde_0590 gly97A; a-glucosidase-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Sde_0601 putative retaining a-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Sde_2499 gly97C; a-glucosidase-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:sde00053]
D Sde_2115 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Sde_2632 gly2D; putative retaining b-glycosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Sde_0618 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Sde_0773 L-ribulose-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:sde00500]
D Sde_2360 gly97B; a-glucosidase-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Sde_0590 gly97A; a-glucosidase-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Sde_0601 putative retaining a-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Sde_2499 gly97C; a-glucosidase-like protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Sde_3210 putative sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D Sde_1000 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Sde_1487 xyl3A; b-xylosidase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2497 ced3A; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0245 ced3B; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2674 bgl3C; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0475 gly3D; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_1394 bgl1B; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Sde_3603 bgl1A; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Sde_3237 cel5H; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3239 cel5G; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0636 cel9A; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2490 cel5B; endoglucanase-like protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2636 cel5D; endoglucanase-like protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2494 cel5J; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3003 cel5A; endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0649 cel9B; cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3420 cel5I; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_1572 cel5F; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2996 gly5L; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3023 gly5M; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0558 gly9C; putative inverting b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2929 cel5E; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0325 cel5C; endoglucanase-like protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2993 gly5K; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2272 cel6A; putative cellobiohydrolase, non-reducing end K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D Sde_1318 cep94A; cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D Sde_0990 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Sde_0991 glycogen synthase-like protein K00703 glgA; starch synthase [EC:2.4.1.21]
D Sde_0987 putative 1,4-a-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Sde_0989 putative a-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Sde_0560 pul13A; putative pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D Sde_0573 putative a-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Sde_0563 putative a-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Sde_2938 putative amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Sde_0589 putative retaining a-glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Sde_0600 putative glucoamylase or glucodextranase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D Sde_0986 4-a-glucanotransferase-like protein K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Sde_0988 putative isoamylase K01214 ISA; isoamylase [EC:3.2.1.68]
D Sde_1254 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_1018 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Sde_1006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Sde_2639 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Sde_3962 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sde00520]
D Sde_1704 chi18A; chitinase. Glycosyl Hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D Sde_3605 chi18C; chitinase. Glycosyl Hydrolase family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D Sde_1790 hex3C; beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Sde_3037 hex18A; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Sde_3271 hex18B; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Sde_3040 nag9A; N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Sde_3036 ATPase, BadF/BadG/BcrA/BcrD type K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D Sde_2639 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Sde_3962 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Sde_3948 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Sde_3041 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Sde_2718 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Sde_3959 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Sde_1086 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Sde_2151 HAD-superfamily hydrolase subfamily IA, variant 3 K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D Sde_0741 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Sde_0742 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Sde_3170 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Sde_2056 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Sde_0872 oxidoreductase-like protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Sde_0871 oxidoreductase, Gfo/Idh/MocA family/transferase hexapeptide repeat protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D Sde_0619 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Sde_1767 arb51A; putative a-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D Sde_0598 arb43H; putative b-xylosidase/a-L-arabinofuranosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Sde_1655 arb43I; putative b-xylosidase/a-L-arabinofuranosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Sde_1018 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Sde_1254 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_1000 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Sde_2115 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Sde_1097 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Sde_1098 UTP-hexose-1-phosphate uridylyltransferase / UDP-glucose-hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Sde_0734 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Sde_0618 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Sde_1006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Sde_1001 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Sde_2134 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Sde_2117 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Sde_2116 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Sde_0990 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:sde00620]
D Sde_1067 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Sde_2573 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Sde_2572 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_0052 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Sde_3956 Alcohol dehydrogenase GroES-like protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D Sde_1308 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Sde_1107 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Sde_0812 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Sde_0811 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Sde_2077 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Sde_3123 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Sde_2866 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D Sde_2645 Betaine-aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D Sde_2413 Glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Sde_2023 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Sde_0394 beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Sde_0661 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Sde_1306 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Sde_1307 Oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Sde_1305 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D Sde_1659 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Sde_0888 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Sde_1992 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Sde_3380 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Sde_0992 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Sde_3872 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_2523 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Sde_2298 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sde00630]
D Sde_1067 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Sde_1659 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Sde_2111 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Sde_1991 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Sde_1893 aconitase / transcriptional regulator, XRE family K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_1330 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Sde_0830 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Sde_1621 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Sde_0502 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Sde_0417 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Sde_2476 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Sde_0338 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_0339 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Sde_3207 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D Sde_2645 Betaine-aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D Sde_1382 2-keto-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Sde_2376 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Sde_2970 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:sde00640]
D Sde_1067 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_1107 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Sde_0812 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Sde_0811 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Sde_2077 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Sde_2103 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Sde_2102 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Sde_1893 aconitase / transcriptional regulator, XRE family K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Sde_1302 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:sde00650]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_2625 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D Sde_1326 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D Sde_1875 polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D Sde_1330 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D Sde_1307 Oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Sde_2108 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Sde_2107 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Sde_2110 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Sde_2109 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Sde_1989 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_2257 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_1642 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_0006 acsA; bifunctional acetoacetyl-CoA synthase/AMP-(Fatty) acid ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Sde_1324 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Sde_2544 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Sde_2543 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Sde_2647 Alcohol dehydrogenase GroES-like protein K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:sde00660]
D Sde_2544 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Sde_2543 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Sde_2103 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Sde_2102 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Sde_2086 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Sde_2085 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Sde_2084 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:sde00562]
D Sde_1410 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Sde_3999 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D Sde_3277 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_0693 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_2717 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sde00190]
D Sde_2108 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Sde_2107 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Sde_2110 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Sde_2109 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Sde_3162 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Sde_3161 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Sde_0044 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Sde_0039 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Sde_0037 coxA; cytochrome-c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Sde_0036 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Sde_0038 ctaG; cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Sde_0043 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Sde_2422 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Sde_2421 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Sde_2420 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Sde_2419 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Sde_1228 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Sde_1227 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Sde_0722 transcriptional regulator, Crp/Fnr family K08738 CYC; cytochrome c
D Sde_3968 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Sde_3966 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Sde_3967 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Sde_3969 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Sde_3965 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Sde_3972 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Sde_3970 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Sde_3971 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Sde_3364 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Sde_3654 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:sde00710]
D Sde_0473 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Sde_1379 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Sde_1277 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_3279 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_1278 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Sde_3278 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Sde_0472 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Sde_3387 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Sde_0612 protein of unknown function DUF1124, sugar phosphate isomerase putative K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Sde_3277 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_0693 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_2717 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_0746 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Sde_0775 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Sde_1485 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Sde_3380 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Sde_0992 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Sde_0661 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Sde_1659 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:sde00720]
D Sde_3872 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Sde_3380 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Sde_1659 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Sde_0888 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Sde_1992 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Sde_2108 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Sde_2107 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Sde_2110 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Sde_2109 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Sde_2102 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Sde_2103 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_1684 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Sde_1991 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Sde_1893 aconitase / transcriptional regulator, XRE family K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Sde_1107 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Sde_0812 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Sde_0811 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Sde_2077 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Sde_1920 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Sde_0468 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Sde_1067 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:sde00680]
D Sde_0052 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Sde_0051 ces1B; esterase-like protein K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D Sde_0417 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Sde_1245 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Sde_3380 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Sde_1659 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Sde_1277 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_3279 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Sde_1278 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Sde_3278 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Sde_0935 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Sde_1067 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Sde_3872 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Sde_2062 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Sde_0494 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Sde_1333 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_3388 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_1332 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Sde_1075 methyl-accepting chemotaxis sensory transducer / phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Sde_1670 phosphoserine phosphatase / phosphoserine:homoserine phosphotransferase / homoserine kinase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:sde00910]
D Sde_2970 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D Sde_2277 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Sde_2278 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Sde_2264 histidine kinase K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Sde_2265 binding-protein-dependent transport systems inner membrane component K15577 nrtB; nitrate/nitrite transport system permease protein
D Sde_2266 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Sde_2353 assimilatory nitrate reductase (ferredoxin) precursor K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D Sde_0084 periplasmic nitrate reductase subunit NapA apoprotein K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D Sde_0085 periplasmic nitrate reductase subunit NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D Sde_0764 assimilatory nitrate reductase (NADH) alpha subunit apoprotein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D Sde_0763 assimilatory nitrate reductase (NADH) beta subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D Sde_2355 assimilatory nitrite reductase (NAD(P)H) large subunit precursor K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D Sde_2354 assimilatory nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D Sde_1748 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Sde_0502 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Sde_2683 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Sde_2682 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Sde_2824 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D Sde_2395 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sde00920]
D Sde_2143 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Sde_2145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Sde_2136 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Sde_3622 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Sde_1669 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Sde_2013 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D Sde_2678 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Sde_1084 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Sde_2901 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Sde_3644 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Sde_2071 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Sde_1885 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D Sde_3132 acyl-CoA dehydrogenase-like protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sde00061]
D Sde_1107 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Sde_0812 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Sde_0811 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Sde_2077 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Sde_1630 acyl carrier protein K02078 acpP; acyl carrier protein
D Sde_1628 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Sde_0626 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Sde_1603 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D Sde_0998 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Sde_1631 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Sde_2457 fabB; beta-ketoacyl-acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Sde_1629 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Sde_3281 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Sde_0999 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Sde_2586 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Sde_2625 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D Sde_1886 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:sde00071]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_1606 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_0166 acyl-CoA dehydrogenase protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Sde_3495 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Sde_1886 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Sde_3531 AMP-dependent synthetase and ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D Sde_0052 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:sde00100]
D Sde_2984 C-5 sterol desaturase K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sde00561]
D Sde_3207 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D Sde_1480 carbohydrate kinase, FGGY K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Sde_1627 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Sde_0011 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Sde_1725 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Sde_1593 agl27A; putative a-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:sde00564]
D Sde_2098 Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Sde_1482 FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Sde_1356 methyl-accepting chemotaxis sensory transducer K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Sde_0011 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Sde_1725 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Sde_1481 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Sde_0801 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Sde_3531 AMP-dependent synthetase and ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D Sde_2592 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Sde_0690 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Sde_2538 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Sde_2858 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Sde_0691 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Sde_2679 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Sde_2052 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Sde_3452 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:sde00600]
D Sde_2994 gly30B; putative retaining b-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D Sde_2992 gly30A; putative retaining b-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D Sde_2935 gal2C; putative b-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_3882 gal2A; beta-galactosidase. Glycosyl Hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_0684 gly2E; putative retaining b-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1285 gly2C; putative retaining b-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1177 gal2B; putative b-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1593 agl27A; putative a-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Sde_3037 hex18A; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Sde_3271 hex18B; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:sde00592]
D Sde_1606 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:sde01040]
D Sde_3444 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Sde_2001 Palmitoyl-CoA hydrolase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D Sde_3758 thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sde00230]
D Sde_0370 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Sde_3065 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Sde_3623 transcription termination factor Rho K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D Sde_1254 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_3256 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Sde_2072 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Sde_0805 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Sde_0893 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Sde_1478 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Sde_0894 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Sde_2802 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Sde_2803 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Sde_0669 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Sde_1675 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Sde_0806 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Sde_1665 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Sde_0580 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Sde_3624 HAD-superfamily hydrolase subfamily IA, variant 3 K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D Sde_1594 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Sde_2550 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Sde_1792 phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Sde_1459 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Sde_1430 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Sde_3647 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Sde_1460 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Sde_3695 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Sde_2458 nrdA; ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Sde_2459 nrdB1; Class Ia ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Sde_3460 nrdB2; Class Ia ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Sde_3697 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Sde_1861 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Sde_2238 RelA/SpoT family protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D Sde_1173 adenylyl cyclase class-3/4/guanylyl cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Sde_1377 adenylyl cyclase class-3/4/guanylyl cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Sde_3600 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D Sde_2661 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Sde_1069 conserved hypothetical protein 730 K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D Sde_0780 5'-Nucleotidase-like protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Sde_2235 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Sde_2237 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Sde_0372 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D Sde_0735 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D Sde_2136 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Sde_2143 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Sde_2145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Sde_0221 urease. Metallo peptidase. MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Sde_0220 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Sde_0219 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:sde00240]
D Sde_2728 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Sde_2729 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Sde_2385 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Sde_2428 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Sde_1750 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Sde_3672 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Sde_2141 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Sde_2595 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Sde_1430 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Sde_2237 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Sde_3189 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Sde_1539 protein of unknown function DUF45 K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D Sde_1243 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Sde_2140 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Sde_1665 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Sde_0580 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Sde_1594 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Sde_0780 5'-Nucleotidase-like protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Sde_1069 conserved hypothetical protein 730 K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D Sde_2396 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Sde_2458 nrdA; ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Sde_2459 nrdB1; Class Ia ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Sde_3460 nrdB2; Class Ia ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Sde_1634 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Sde_0350 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Sde_1727 flavin reductase-like, FMN-binding K09024 rutF; flavin reductase [EC:1.5.1.-]
D Sde_0091 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sde00250]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_2252 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Sde_0146 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Sde_1164 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Sde_2423 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Sde_3670 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Sde_2661 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Sde_1675 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Sde_2385 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Sde_1989 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_2257 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_1642 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_2683 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Sde_2682 glutamate synthase (NADPH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Sde_1748 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Sde_0502 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Sde_2728 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Sde_2729 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Sde_2867 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Sde_3948 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Sde_3041 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Sde_2072 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sde00260]
D Sde_1192 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_1300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_2083 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Sde_1209 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Sde_1670 phosphoserine phosphatase / phosphoserine:homoserine phosphotransferase / homoserine kinase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D Sde_1210 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Sde_0417 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Sde_2062 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Sde_0494 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Sde_3207 conserved hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D Sde_1333 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_3388 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_1332 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Sde_1075 methyl-accepting chemotaxis sensory transducer / phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Sde_0091 short-chain dehydrogenase/reductase SDR K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D Sde_2476 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Sde_0338 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_0339 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Sde_2538 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Sde_2858 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Sde_0691 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Sde_3386 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Sde_2078 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Sde_2079 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Sde_1644 4-aminobutyrate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Sde_1190 aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Sde_1189 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D Sde_1191 Ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:sde00270]
D Sde_1084 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Sde_2901 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Sde_2010 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Sde_0638 methyl-accepting chemotaxis sensory transducer / methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Sde_0470 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Sde_1221 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Sde_1222 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Sde_3498 autoinducer synthesis protein K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Sde_2550 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Sde_2149 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Sde_1793 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Sde_0469 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Sde_1730 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D Sde_1192 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_1300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_2083 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Sde_1209 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Sde_3644 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Sde_2071 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Sde_0388 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_3057 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_3583 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Sde_3635 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_2678 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Sde_1663 Pyridoxal phosphate-dependent deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D Sde_1659 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Sde_2239 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Sde_1333 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_3388 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_1332 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:sde00280]
D Sde_0388 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_3057 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_0166 acyl-CoA dehydrogenase protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Sde_3495 acyl-CoA dehydrogenase-like protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_1606 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Sde_0006 acsA; bifunctional acetoacetyl-CoA synthase/AMP-(Fatty) acid ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sde00290]
D Sde_3386 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Sde_2086 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Sde_2085 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Sde_2084 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Sde_2544 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Sde_2543 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Sde_2539 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Sde_0358 dihydroxyacid dehydratase / methyl-accepting chemotaxis sensory transducer K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Sde_0388 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_3057 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_0903 aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D Sde_1164 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Sde_2523 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Sde_2298 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:sde00300]
D Sde_1209 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Sde_1192 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_1300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_2083 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Sde_2622 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Sde_2730 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Sde_2606 tetrahydrodipicolinate succinylase, putative K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Sde_2440 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Sde_2603 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Sde_2607 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Sde_0237 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Sde_0238 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Sde_0843 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Sde_0844 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:sde00310]
D Sde_2105 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_1989 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_2257 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_1642 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_2371 FAD linked oxidase-like protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:sde00220]
D Sde_2441 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Sde_2423 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Sde_3670 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Sde_1127 Allophanate hydrolase subunit 2 K01941 uca; urea carboxylase [EC:6.3.4.6]
D Sde_1128 Amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Sde_0221 urease. Metallo peptidase. MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Sde_0220 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Sde_0219 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D Sde_2867 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Sde_0502 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Sde_2728 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Sde_2729 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Sde_1748 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_1164 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Sde_0360 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Sde_0857 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Sde_3675 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Sde_0833 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Sde_2440 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Sde_0363 acetylornithine deacetylase ArgE. Metallo peptidase. MEROPS family M20A / acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:sde00330]
D Sde_2967 ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D Sde_1598 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Sde_1874 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Sde_1222 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Sde_1221 S-adenosylmethionine decarboxylase related K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Sde_1596 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D Sde_3642 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Sde_1011 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Sde_3345 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Sde_0552 prolyl aminopeptidase. Serine peptidase. MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Sde_3700 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D Sde_3273 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:sde00340]
D Sde_3169 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Sde_2662 tRNA synthetase, class II (G, H, P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Sde_3223 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Sde_3222 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Sde_0489 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Sde_0488 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Sde_0490 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Sde_0487 methyl-accepting chemotaxis sensory transducer / imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Sde_1012 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Sde_3168 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Sde_3536 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:sde00350]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_1012 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Sde_0316 tyrosinase K00505 TYR; tyrosinase [EC:1.14.18.1]
D Sde_0052 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D Sde_1989 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_2257 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_1642 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:sde00360]
D Sde_2886 ferredoxin K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_1012 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Sde_3888 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:sde00380]
D Sde_2105 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_0830 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Sde_3888 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sde00400]
D Sde_2007 transcriptional regulator, XRE family / 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Sde_2685 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Sde_0813 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Sde_0026 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Sde_1230 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Sde_2686 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Sde_2146 prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D Sde_2091 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Sde_0747 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Sde_0752 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Sde_0753 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Sde_2080 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Sde_0754 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Sde_2078 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Sde_2079 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Sde_2147 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_1012 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:sde00410]
D Sde_1062 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Sde_1061 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00430 Taurine and hypotaurine metabolism [PATH:sde00430]
D Sde_1303 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Sde_1748 glutamate dehydrogenase (NAD) K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:sde00450]
D Sde_2010 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Sde_0638 methyl-accepting chemotaxis sensory transducer / methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Sde_1417 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Sde_3537 aminotransferase, class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Sde_1692 trxB; flavoprotein thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Sde_2143 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Sde_2145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Sde_2398 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sde00460]
D Sde_1487 xyl3A; b-xylosidase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2497 ced3A; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0245 ced3B; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2674 bgl3C; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0475 gly3D; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_1394 bgl1B; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Sde_3603 bgl1A; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Sde_1303 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Sde_0417 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Sde_2970 Formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:sde00470]
D Sde_0914 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Sde_0850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Sde_2867 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Sde_1613 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Sde_0846 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Sde_1663 Pyridoxal phosphate-dependent deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D Sde_0237 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Sde_0238 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:sde00480]
D Sde_1303 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Sde_0545 LamB/YcsF K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Sde_3583 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Sde_3635 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Sde_1372 PepA aminopeptidase. Metallo peptidase. MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Sde_0760 aminopeptidase N. Metallo peptidase. MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Sde_1737 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Sde_2979 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_0362 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3206 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3433 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3528 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3827 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3979 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_0800 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_1851 NADPH-glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Sde_1684 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Sde_0635 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Sde_1380 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Sde_2931 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Sde_1427 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Sde_1222 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:sde00511]
D Sde_2935 gal2C; putative b-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_3882 gal2A; beta-galactosidase. Glycosyl Hydrolase family 2 K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_0684 gly2E; putative retaining b-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1285 gly2C; putative retaining b-glycosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_1177 gal2B; putative b-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Sde_3037 hex18A; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Sde_3271 hex18B; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Sde_0169 gly2G; putative retaining b-glycosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D Sde_2503 gly95A; a-L-fucosidase-like protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D Sde_2994 gly30B; putative retaining b-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D Sde_2992 gly30A; putative retaining b-glycosidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:sde00540]
D Sde_2585 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Sde_0854 lpx11A; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Sde_2587 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Sde_1900 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Sde_2584 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Sde_2059 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Sde_3174 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Sde_1244 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Sde_3175 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Sde_2058 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Sde_0386 putative CMP-KDO KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Sde_0014 htrB; lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Sde_2623 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Sde_3147 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Sde_1100 heptosyltransferase-like protein K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
C 00542 O-Antigen repeat unit biosynthesis [PATH:sde00542]
D Sde_2133 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sde00541]
D Sde_1000 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Sde_0734 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Sde_2115 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Sde_0618 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Sde_2130 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Sde_2131 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_2113 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_0997 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Sde_2128 CheW protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D Sde_1001 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D Sde_2134 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Sde_2117 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Sde_2116 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Sde_3959 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Sde_0619 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Sde_0872 oxidoreductase-like protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Sde_0871 oxidoreductase, Gfo/Idh/MocA family/transferase hexapeptide repeat protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:sde00550]
D Sde_3170 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Sde_2056 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Sde_0849 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Sde_0846 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Sde_0843 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Sde_0850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Sde_0844 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Sde_2593 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Sde_2232 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Sde_1657 phosphoesterase, PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Sde_0845 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Sde_0848 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Sde_2692 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Sde_0825 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D Sde_0603 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Sde_3341 PAS/PAC sensor signal transduction histidine kinase / peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Sde_0842 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Sde_3337 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:sde00552]
D Sde_2232 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Sde_1657 phosphoesterase, PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Sde_2133 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Sde_3798 b-glycosyltransferase-like protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:sde00543]
D Sde_2133 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Sde_1084 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sde00730]
D Sde_0369 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Sde_0368 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Sde_0829 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Sde_1413 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Sde_0503 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Sde_1456 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Sde_3381 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Sde_1454 thiazole biosynthesis K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Sde_0828 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Sde_3453 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Sde_2677 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Sde_0655 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Sde_3408 aminoglycoside phosphotransferase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D Sde_2235 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sde00740]
D Sde_3450 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Sde_3456 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Sde_3458 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Sde_3455 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Sde_3457 ribE; Riboflavin synthase, alpha subunit RibE K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Sde_2567 riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Sde_0370 Nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Sde_3065 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Sde_3360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:sde00750]
D Sde_2258 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Sde_1159 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D Sde_1332 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Sde_0738 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Sde_1713 Pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Sde_1210 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sde00760]
D Sde_2252 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Sde_2524 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Sde_0874 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Sde_1665 5-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Sde_0580 5'-Nucleotidase-like protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D Sde_3344 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Sde_2237 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Sde_2018 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Sde_2553 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Sde_1287 CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Sde_1466 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Sde_1733 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Sde_2516 pyridine nucleotide-disulphide oxidoreductase dimerisation region K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D Sde_1805 pyridine nucleotide-disulphide oxidoreductase dimerisation region K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D Sde_0957 putative NAD(P) transhydrogenase subunit alpha part 2 transmembraneprotein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Sde_0956 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Sde_1274 alanine dehydrogenase/PNT-like protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Sde_1275 pyridine nucleotide transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Sde_0958 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Sde_1276 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Sde_1989 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_2257 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Sde_1642 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:sde00770]
D Sde_2544 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Sde_2543 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Sde_2539 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Sde_0358 dihydroxyacid dehydratase / methyl-accepting chemotaxis sensory transducer K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Sde_3379 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Sde_1061 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Sde_0916 transcriptional activator, putative, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Sde_3677 Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Sde_2237 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Sde_3599 CheW protein K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Sde_0860 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Sde_0079 Phosphopantetheinyl transferase-like protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Sde_0388 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_3057 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_1062 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:sde00780]
D Sde_3137 Biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Sde_0998 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Sde_1631 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Sde_2457 fabB; beta-ketoacyl-acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Sde_1629 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Sde_3281 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Sde_2586 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Sde_3138 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Sde_2227 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Sde_3135 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Sde_3139 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Sde_0915 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:sde00785]
D Sde_3335 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Sde_3334 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_2573 2-oxo-acid dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Sde_2572 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Sde_2106 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Sde_2105 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Sde_2476 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D Sde_0338 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Sde_0339 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:sde00790]
D Sde_2093 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Sde_0655 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Sde_2654 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Sde_0723 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Sde_3377 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Sde_0724 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Sde_2719 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Sde_0351 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Sde_2076 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Sde_3450 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Sde_3456 ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Sde_1671 aminodeoxychorismate synthase, subunit I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Sde_1632 aminodeoxychorismate lyase apoprotein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Sde_0891 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Sde_0726 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D Sde_2526 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Sde_2525 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Sde_1172 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Sde_2357 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Sde_2608 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Sde_2610 transcriptional regulator, GntR family / molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Sde_2358 Molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Sde_2359 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Sde_2712 Uncharacterized MobA-related protein-like protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D Sde_2259 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:sde00670]
D Sde_0351 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Sde_1920 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Sde_0417 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Sde_0893 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Sde_0806 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Sde_0020 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Sde_2129 formyl transferase-like protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Sde_0338 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Sde_2010 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Sde_0350 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Sde_2376 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Sde_0468 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Sde_3517 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:sde00860]
D Sde_1496 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Sde_3252 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Sde_0827 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Sde_0654 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Sde_3667 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Sde_3666 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Sde_2681 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Sde_0025 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Sde_2483 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Sde_0831 conserved hypothetical protein 701 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Sde_0129 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Sde_3665 protein of unknown function DUF513, hemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Sde_1698 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Sde_2356 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Sde_0044 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Sde_0043 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Sde_0629 cob(I)yrinic acid a,c-diamide adenosyltransferase / PAS/PAC sensor signal transduction histidine kinase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Sde_0240 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Sde_3204 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Sde_0631 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Sde_0630 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Sde_0632 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Sde_2632 gly2D; putative retaining b-glycosidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D Sde_2432 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sde00130]
D Sde_3837 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Sde_3657 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Sde_3360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Sde_3511 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D Sde_2150 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Sde_3512 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Sde_2700 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Sde_0758 putative ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D Sde_3400 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D Sde_0048 methyl-accepting chemotaxis sensory transducer K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Sde_0899 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D Sde_3518 NADPH-dependent FMN reductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sde00900]
D Sde_3381 1-Deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Sde_2591 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Sde_1247 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Sde_3255 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Sde_1248 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Sde_1434 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Sde_2563 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_3360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Sde_3221 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Sde_1007 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Sde_2593 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:sde00907]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_3956 Alcohol dehydrogenase GroES-like protein K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D Sde_3776 histidine kinase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D Sde_1606 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Sde_0472 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D Sde_2997 Integrins alpha chain K21162 sgcE4; enediyne biosynthesis protein E4
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D Sde_1764 beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:sde00523]
D Sde_2130 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Sde_2131 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_2113 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_0997 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Sde_2127 putative dNDP-4-keto-6-deoxy-glucose-2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
D Sde_2126 oxidoreductase-like protein K13327 spnN; dTDP-3,4-didehydro-2,6-dideoxy-alpha-D-glucose 3-reductase [EC:1.1.1.384]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:sde01053]
D Sde_3400 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D Sde_3398 Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D Sde_3393 short-chain dehydrogenase/reductase SDR K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D Sde_3401 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D Sde_3399 AMP-dependent synthetase and ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:sde01055]
D Sde_2131 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_2113 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_2127 putative dNDP-4-keto-6-deoxy-glucose-2,3-dehydratase K16435 evaA; dTDP-4-dehydro-6-deoxy-alpha-D-glucopyranose 2,3-dehydratase [EC:4.2.1.159]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:sde00946]
D Sde_1487 xyl3A; b-xylosidase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2497 ced3A; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0245 ced3B; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2674 bgl3C; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0475 gly3D; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_1394 bgl1B; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Sde_3603 bgl1A; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:sde00332]
D Sde_1011 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Sde_3345 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:sde00261]
D Sde_2143 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Sde_2145 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Sde_1192 Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_1300 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Sde_2083 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Sde_2622 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Sde_2730 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sde00521]
D Sde_1018 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Sde_1254 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Sde_3676 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Sde_1410 Inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Sde_2130 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Sde_2131 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_2113 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_0997 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Sde_1018 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:sde00525]
D Sde_2130 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Sde_2131 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Sde_2113 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:sde00401]
D Sde_2146 prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_1012 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D Sde_1401 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_1096 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_1104 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_2828 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_2498 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_1094 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_2807 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_2391 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_1262 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_1398 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_1105 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D Sde_3053 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D Sde_0747 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Sde_0752 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Sde_1628 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Sde_1629 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Sde_3281 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Sde_1630 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:sde00999]
D Sde_0470 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Sde_0026 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Sde_1487 xyl3A; b-xylosidase-like protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2497 ced3A; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0245 ced3B; exo-1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_2674 bgl3C; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_0475 gly3D; putative retaining b-glycosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Sde_1394 bgl1B; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Sde_3603 bgl1A; putative retaining b-glycosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:sde00362]
D Sde_1606 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D Sde_1307 Oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:sde00627]
D Sde_3123 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Sde_3360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:sde00364]
D Sde_1544 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:sde00625]
D Sde_0052 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sde00361]
D Sde_1544 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:sde00623]
D Sde_1544 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D Sde_1606 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation [PATH:sde00791]
D Sde_1128 Amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Sde_1127 Allophanate hydrolase subunit 2 K01941 uca; urea carboxylase [EC:6.3.4.6]
D Sde_0221 urease. Metallo peptidase. MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Sde_0220 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Sde_0219 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:sde00930]
D Sde_1605 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:sde00626]
D Sde_0052 Alcohol dehydrogenase GroES-like protein K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sde03020]
D Sde_0924 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Sde_0925 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Sde_0984 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Sde_3696 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sde03010]
D Sde_2137 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Sde_2597 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Sde_0966 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Sde_0983 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Sde_0976 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Sde_1057 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Sde_0927 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Sde_0973 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Sde_3163 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Sde_0959 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Sde_0982 SSU ribosomal protein S11P / histidine kinase K02948 RP-S11; small subunit ribosomal protein S11
D Sde_0926 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Sde_0981 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Sde_0972 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Sde_2705 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Sde_1203 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Sde_0968 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Sde_1058 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Sde_0964 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Sde_1013 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Sde_0719 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Sde_0921 transcriptional regulator, GntR family / LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Sde_0963 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Sde_0960 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Sde_0961 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Sde_0971 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Sde_0974 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Sde_0923 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Sde_1059 LSU ribosomal protein L9P / transcriptional regulator, GntR family K02939 RP-L9; large subunit ribosomal protein L9
D Sde_0922 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Sde_0920 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Sde_3164 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Sde_0969 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Sde_0978 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Sde_0967 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Sde_0985 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Sde_0975 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Sde_1206 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Sde_1580 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Sde_1008 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Sde_0965 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Sde_0962 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Sde_0970 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Sde_3257 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Sde_1009 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Sde_3679 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Sde_0977 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Sde_2693 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Sde_1626 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Sde_3680 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Sde_4017 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Sde_1579 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Sde_0980 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Sde_R0043 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Sde_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Sde_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Sde_R0042 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Sde_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Sde_R0041 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sde00970]
D Sde_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Sde_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Sde_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0024 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Sde_R0002 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Sde_R0030 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Sde_R0031 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Sde_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Sde_R0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Sde_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Sde_R0009 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Sde_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Sde_R0035 tRNA-His K14226 tRNA-His; tRNA His
D Sde_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Sde_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Sde_R0040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Sde_R0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D Sde_R0005 tRNA-Met K14230 tRNA-Met; tRNA Met
D Sde_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met
D Sde_R0004 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Sde_R0033 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Sde_R0026 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Sde_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Sde_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Sde_R0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Sde_R0010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Sde_R0007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Sde_R0011 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Sde_R0008 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Sde_R0025 tRNA-Val K14237 tRNA-Val; tRNA Val
D Sde_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val
D Sde_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D Sde_1496 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Sde_3194 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Sde_3195 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Sde_3193 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Sde_1902 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Sde_1299 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Sde_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Sde_0013 glyQ; Glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Sde_0012 glyS; Glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Sde_1577 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Sde_1697 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Sde_1903 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Sde_2398 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Sde_0020 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Sde_2129 formyl transferase-like protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Sde_1369 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Sde_3308 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Sde_2566 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Sde_1217 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Sde_2379 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Sde_0909 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Sde_1435 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Sde_1581 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Sde_1582 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Sde_1088 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Sde_2228 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sde03060]
D Sde_0979 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Sde_0918 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Sde_2716 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Sde_1407 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Sde_1408 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Sde_1662 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Sde_4014 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Sde_0856 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Sde_0497 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Sde_1202 signal recognition particle subunit FFH/SRP54 (srp54) / transcription elongation factor GreB K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Sde_R0021 ffs; SRP RNA; RNA component of signal recognitionparticle K01983 ffs; SRP RNA
D Sde_3597 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Sde_3224 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Sde_3225 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Sde_3226 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Sde_0576 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Sde_2245 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Sde_3849 Peptidase S26A, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Sde_2565 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sde04122]
D Sde_1413 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Sde_2678 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Sde_1155 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Sde_2575 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Sde_1677 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Sde_2610 transcriptional regulator, GntR family / molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Sde_2357 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Sde_2609 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein
D Sde_0613 UBA/THIF-type NAD/FAD binding fold K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Sde_2608 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Sde_2358 Molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Sde_0503 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Sde_1455 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:sde03018]
D Sde_0347 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Sde_1619 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Sde_0620 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D Sde_1245 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Sde_2704 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Sde_3200 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Sde_1509 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Sde_1054 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Sde_3034 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Sde_1489 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Sde_3656 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Sde_2733 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Sde_0884 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Sde_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Sde_3654 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Sde_3376 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sde03030]
D Sde_3411 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_2021 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_1106 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Sde_1335 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Sde_1652 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Sde_3310 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Sde_1371 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Sde_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Sde_1060 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Sde_0717 histidine kinase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Sde_0996 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Sde_0066 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Sde_2583 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Sde_0073 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Sde_1881 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sde03410]
D Sde_2604 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Sde_1218 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Sde_0337 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Sde_3681 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Sde_0555 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Sde_3671 histidine kinase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Sde_1995 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Sde_0073 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Sde_1213 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Sde_1881 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sde03420]
D Sde_1796 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Sde_0993 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Sde_1753 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Sde_2053 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Sde_3764 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Sde_0073 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Sde_1881 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sde03430]
D Sde_1256 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Sde_2669 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Sde_3764 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Sde_2394 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D Sde_1458 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Sde_0198 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Sde_3220 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Sde_0197 conserved hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Sde_1213 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Sde_0996 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Sde_1106 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Sde_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Sde_1335 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Sde_3310 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Sde_1652 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Sde_3411 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_2021 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_1371 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Sde_1881 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:sde03440]
D Sde_1213 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Sde_0996 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Sde_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Sde_2241 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Sde_1337 recombination protein RecR K06187 recR; recombination protein RecR
D Sde_1288 recA protein K03553 recA; recombination protein RecA
D Sde_0073 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Sde_2534 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Sde_2533 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Sde_2535 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Sde_3717 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Sde_1106 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Sde_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Sde_1335 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Sde_3310 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Sde_1652 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Sde_3411 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_2021 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_1371 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Sde_2694 transcription elongation factor GreA / replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:sde03250]
D Sde_1714 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Sde_0253 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sde02010]
D Sde_2264 histidine kinase K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Sde_2265 binding-protein-dependent transport systems inner membrane component K15577 nrtB; nitrate/nitrite transport system permease protein
D Sde_2266 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Sde_2846 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Sde_2847 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Sde_1367 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein
D Sde_1364 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D Sde_1365 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Sde_1366 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Sde_3172 toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D Sde_0766 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Sde_0769 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein
D Sde_0768 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein
D Sde_0767 ABC transporter related K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Sde_2613 OmpA/MotB K02040 pstS; phosphate transport system substrate-binding protein
D Sde_3755 phosphate binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D Sde_3754 Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Sde_3753 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Sde_3752 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Sde_0226 ABC-type branched-chain amino acid transport system, periplasmic component K11959 urtA; urea transport system substrate-binding protein
D Sde_2975 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K11959 urtA; urea transport system substrate-binding protein
D Sde_0227 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Sde_2974 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Sde_2973 inner-membrane translocator K11961 urtC; urea transport system permease protein
D Sde_0228 inner-membrane translocator K11961 urtC; urea transport system permease protein
D Sde_2972 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D Sde_0229 histidine kinase K11962 urtD; urea transport system ATP-binding protein
D Sde_2971 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D Sde_0230 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D Sde_2027 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2028 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2029 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Sde_2030 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Sde_2031 ABC transporter related K10823 oppF; oligopeptide transport system ATP-binding protein
D Sde_0060 transcriptional regulator, XRE family K09815 znuA; zinc transport system substrate-binding protein
D Sde_0057 ABC-3 K09816 znuB; zinc transport system permease protein
D Sde_0058 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Sde_3735 ABC-type Na+ efflux pump permease component-like protein K09696 natB; sodium transport system permease protein
D Sde_3736 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Sde_1809 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Sde_1811 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Sde_1810 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Sde_1869 heme exporter protein D K02196 ccmD; heme exporter protein D
D Sde_1868 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Sde_1867 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Sde_1866 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Sde_1373 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D Sde_1374 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Sde_3178 PAS/PAC sensor signal transduction histidine kinase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Sde_3595 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Sde_3596 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Sde_0387 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Sde_0526 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D Sde_1291 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS) [PATH:sde02060]
D Sde_0348 Phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Sde_3182 Phosphotransferase system, HPr K08485 ptsO; phosphocarrier protein NPr
D Sde_3180 response regulator receiver sensor signal transduction histidine kinase K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:sde03070]
D Sde_0366 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Sde_1343 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D Sde_3580 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D Sde_3581 type II secretion system protein C K02452 gspC; general secretion pathway protein C
D Sde_3578 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Sde_3577 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Sde_3466 hypothetical protein K02456 gspG; general secretion pathway protein G
D Sde_3576 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D Sde_3575 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D Sde_3574 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D Sde_3573 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Sde_3572 General secretion pathway L K02461 gspL; general secretion pathway protein L
D Sde_3571 General secretion pathway M protein K02462 gspM; general secretion pathway protein M
D Sde_3579 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Sde_0364 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Sde_1345 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Sde_1407 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Sde_1408 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Sde_0918 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Sde_2716 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Sde_0979 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Sde_1662 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Sde_4014 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Sde_0856 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Sde_3597 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Sde_0497 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Sde_1202 signal recognition particle subunit FFH/SRP54 (srp54) / transcription elongation factor GreB K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Sde_3224 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Sde_3225 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Sde_3226 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Sde_1538 two component transcriptional regulator, LuxR family K11904 vgrG; type VI secretion system secreted protein VgrG
D Sde_1537 histidine kinase K11903 hcp; type VI secretion system secreted protein Hcp
D Sde_1525 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D Sde_1522 ImcF-related K11891 impL; type VI secretion system protein ImpL
D Sde_1523 OmpA/MotB K11892 impK; type VI secretion system protein ImpK
D Sde_1536 ATPase AAA-2 K11907 vasG; type VI secretion system protein VasG
D Sde_2434 protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sde02020]
D Sde_3839 ATP-binding region, ATPase-like protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Sde_3838 Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Sde_0655 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Sde_2654 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D Sde_2613 OmpA/MotB K02040 pstS; phosphate transport system substrate-binding protein
D Sde_3755 phosphate binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D Sde_3354 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Sde_3353 response regulator receiver K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Sde_0550 two component transcriptional regulator, winged helix family K07661 rstA; two-component system, OmpR family, response regulator RstA
D Sde_0290 response regulator receiver K07661 rstA; two-component system, OmpR family, response regulator RstA
D Sde_2247 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_3093 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_2723 ATP-binding region, ATPase-like protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Sde_2724 response regulator receiver K07664 baeR; two-component system, OmpR family, response regulator BaeR
D Sde_3933 secretion protein HlyD K07799 mdtA; membrane fusion protein, multidrug efflux system
D Sde_1949 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Sde_1948 Heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Sde_1930 secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Sde_3936 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Sde_1931 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D Sde_3935 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D Sde_2200 flagellin-like protein K02406 fliC; flagellin
D Sde_2202 flagellin-like protein K02406 fliC; flagellin
D Sde_2164 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Sde_3219 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_2159 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_0043 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Sde_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Sde_1015 ATP-binding region, ATPase-like protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Sde_3669 Sensory transduction protein kinase AlgZ K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Sde_3668 Two-component response regulator AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR
D Sde_3736 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Sde_3735 ABC-type Na+ efflux pump permease component-like protein K09696 natB; sodium transport system permease protein
D Sde_2240 ATP-binding region, ATPase-like protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Sde_2054 response regulator receiver K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Sde_1301 carbon storage regulator K03563 csrA; carbon storage regulator
D Sde_3821 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Sde_3820 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D Sde_2602 protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Sde_0500 PAS/PAC sensor signal transduction histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Sde_0499 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Sde_0502 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Sde_3375 Two-component response regulator CbrB K07713 zraR; two-component system, NtrC family, response regulator HydG
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_2554 Sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Sde_2555 Two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D Sde_3179 sigma-54, DNA-binding K03092 rpoN; RNA polymerase sigma-54 factor
D Sde_1078 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Sde_0864 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Sde_2214 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Sde_3104 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Sde_3046 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Sde_1108 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_0391 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3105 PAS domain protein K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3112 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_0081 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_2316 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3111 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_2155 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_2156 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_3106 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_3107 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_2161 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_3108 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_2163 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_1309 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_3102 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_2160 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_2215 CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Sde_3630 Protein-glutamate O-methyltransferase K02661 pilK; type IV pilus assembly protein PilK
D Sde_3631 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Sde_0520 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Sde_3632 CheW-like protein K02659 pilI; twitching motility protein PilI
D Sde_0521 hypothetical protein K02659 pilI; twitching motility protein PilI
D Sde_3629 response regulator receiver K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Sde_3634 response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG
D Sde_0522 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3633 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3628 CheB methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D Sde_3627 CheW-like protein K06598 chpC; chemosensory pili system protein ChpC
D Sde_3115 PAS/PAC sensor signal transduction histidine kinase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D Sde_2194 sigma-54 factor, interaction region K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D Sde_2192 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D Sde_2191 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC
D Sde_0755 cyclic nucleotide-binding K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Sde_2867 Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Sde_2881 ATP-binding region, ATPase-like protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Sde_2880 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D Sde_3162 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Sde_3161 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Sde_0722 transcriptional regulator, Crp/Fnr family K08738 CYC; cytochrome c
D Sde_2422 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Sde_2421 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Sde_2420 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Sde_2419 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Sde_1228 cytochrome bd ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Sde_1227 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Sde_0366 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Sde_1576 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Sde_0132 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Sde_3795 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Sde_2057 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Sde_0944 ces8B; pectin methylesterase-like protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Sde_3237 cel5H; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3239 cel5G; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0636 cel9A; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2490 cel5B; endoglucanase-like protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2636 cel5D; endoglucanase-like protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2494 cel5J; putative endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3003 cel5A; endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0649 cel9B; cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3420 cel5I; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_1572 cel5F; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2996 gly5L; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_3023 gly5M; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0558 gly9C; putative inverting b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2929 cel5E; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_0325 cel5C; endoglucanase-like protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2993 gly5K; putative retaining b-glycosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Sde_2272 cel6A; putative cellobiohydrolase, non-reducing end K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D Sde_1443 FecR protein K07165 fecR; transmembrane sensor
D Sde_2389 FecR protein K07165 fecR; transmembrane sensor
D Sde_1089 Signal transduction histidine kinase-like protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D Sde_2178 Hpt K20976 hptB; histidine phosphotransfer protein HptB
D Sde_2179 Stage II sporulation E K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D Sde_3118 response regulator receiver K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D Sde_3117 Sulfate transporter/antisigma-factor antagonist STAS K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D Sde_2180 Sulfate transporter/antisigma-factor antagonist STAS K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D Sde_2217 Anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Sde_3162 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sde02024]
D Sde_3115 PAS/PAC sensor signal transduction histidine kinase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D Sde_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Sde_3498 autoinducer synthesis protein K13060 lasI; acyl homoserine lactone synthase [EC:2.3.1.184]
D Sde_0747 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Sde_0752 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Sde_2007 transcriptional regulator, XRE family / 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Sde_2912 conserved hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Sde_3448 pel1D; putative pectin/pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_0942 pel1C; putative pectin/pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_0943 pel1A; putative pectin/pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_3447 pes8A; pectin methylesterase-like protein K01728 pel; pectate lyase [EC:4.2.2.2]
D Sde_0798 conserved hypothetical protein K20276 bapA; large repetitive protein
D Sde_3233 PA14 K20276 bapA; large repetitive protein
D Sde_3323 RTX toxins and related Ca2+-binding protein K20276 bapA; large repetitive protein
D Sde_1886 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Sde_0755 cyclic nucleotide-binding K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Sde_1974 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Sde_0059 transcriptional regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Sde_3691 man26A; putative endo-b-1,4-mannanase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_0064 man5N; putative mannan endo-1,4-b-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_0656 man5O; putative mannan endo-1,4-b-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_2541 man5Q; putative retaining b-glycosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Sde_3450 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D Sde_3458 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Sde_3996 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Sde_2449 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D Sde_2027 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2028 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2029 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Sde_2030 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Sde_2031 ABC transporter related K10823 oppF; oligopeptide transport system ATP-binding protein
D Sde_4014 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Sde_3325 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Sde_0918 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Sde_2716 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Sde_0979 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Sde_1662 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Sde_0856 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Sde_3597 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Sde_0497 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Sde_1202 signal recognition particle subunit FFH/SRP54 (srp54) / transcription elongation factor GreB K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:sde02030]
D Sde_1108 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_0391 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3105 PAS domain protein K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3112 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_0081 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_2316 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3111 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3107 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_2161 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_2155 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_2156 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_3106 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_3108 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_2163 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_1309 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_0393 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Sde_2162 Chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D Sde_3102 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_2160 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_3046 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Sde_2215 CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Sde_3103 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Sde_2214 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Sde_3104 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Sde_2187 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Sde_2175 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Sde_2174 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN
D Sde_3219 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_2159 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_3218 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Sde_2158 OmpA/MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:sde02040]
D Sde_2189 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE
D Sde_2188 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Sde_2187 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Sde_2186 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Sde_2185 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Sde_2184 Flagellar export FliJ K02413 fliJ; flagellar protein FliJ
D Sde_2177 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Sde_2176 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Sde_3584 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Sde_2175 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Sde_2174 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN
D Sde_2173 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D Sde_2172 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Sde_2171 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Sde_2170 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Sde_2167 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Sde_2169 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Sde_2216 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Sde_2213 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Sde_2212 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Sde_2211 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Sde_2210 flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE
D Sde_2209 Flagellar basal-body rod FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Sde_2208 Flagellar basal-body rod FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Sde_2207 Hpt sensor hybrid histidine kinase K02393 flgH; flagellar L-ring protein FlgH
D Sde_2206 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Sde_2205 putative N-acetylmuramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Sde_2204 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D Sde_2203 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Sde_2427 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY
D Sde_2200 flagellin-like protein K02406 fliC; flagellin
D Sde_2202 flagellin-like protein K02406 fliC; flagellin
D Sde_2198 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2
D Sde_2197 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Sde_2196 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Sde_3219 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_2159 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_3218 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Sde_2158 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Sde_2217 Anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Sde_2218 FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D Sde_0716 RNA polymerase sigma factor RpoD-like protein K03086 rpoD; RNA polymerase primary sigma factor
D Sde_2194 sigma-54 factor, interaction region K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D Sde_3179 sigma-54, DNA-binding K03092 rpoN; RNA polymerase sigma-54 factor
D Sde_2191 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC
D Sde_2164 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Sde_1245 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Sde_2010 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sde01501]
D Sde_0879 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Sde_1790 hex3C; beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Sde_2027 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2028 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2029 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Sde_2030 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Sde_2031 ABC transporter related K10823 oppF; oligopeptide transport system ATP-binding protein
D Sde_2615 TonB-like protein K02172 blaR1; bla regulator protein blaR1
D Sde_2616 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Sde_0331 protein of unknown function UPF0027 K18148 rtcB; release factor H-coupled RctB family protein
D Sde_1119 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Sde_1118 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Sde_2449 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D Sde_0366 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Sde_2692 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Sde_3341 PAS/PAC sensor signal transduction histidine kinase / peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Sde_0842 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:sde01502]
D Sde_0850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Sde_0914 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Sde_0844 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Sde_0845 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Sde_0848 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sde01503]
D Sde_3354 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Sde_3353 response regulator receiver K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Sde_2670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Sde_2247 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_3093 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_0077 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Sde_1714 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Sde_0253 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Sde_1119 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Sde_1118 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Sde_0366 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Sde_2585 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sde01000]
C 01001 Protein kinases [BR:sde01001]
D Sde_1558 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Sde_2434 protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D Sde_1116 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Sde_0106 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Sde_3080 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Sde_3944 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Sde_0092 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Sde_2039 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Sde_0748 transcriptional regulator, XRE family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Sde_3839 ATP-binding region, ATPase-like protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Sde_3354 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Sde_2723 ATP-binding region, ATPase-like protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Sde_1949 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Sde_1015 ATP-binding region, ATPase-like protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Sde_0551 ATP-binding region, ATPase-like protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Sde_2240 ATP-binding region, ATPase-like protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Sde_3821 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Sde_3669 Sensory transduction protein kinase AlgZ K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Sde_0479 histidine kinase internal region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Sde_3901 histidine kinase internal region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Sde_0500 PAS/PAC sensor signal transduction histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Sde_2554 Sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Sde_1360 ATP-binding region, ATPase-like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_1728 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_3803 ATP-binding region, ATPase-like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_3809 ATP-binding region, ATPase-like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_3107 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_2161 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_3629 response regulator receiver K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Sde_3115 PAS/PAC sensor signal transduction histidine kinase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D Sde_2192 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D Sde_2881 ATP-binding region, ATPase-like protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Sde_1089 Signal transduction histidine kinase-like protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D Sde_2488 ATP-binding region, ATPase-like protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sde01009]
D Sde_0469 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Sde_2099 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Sde_1774 protein phosphatase 2C-like protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Sde_1075 methyl-accepting chemotaxis sensory transducer / phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:sde01002]
D Sde_2565 signal peptidase II. Aspartic peptidase. MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Sde_0861 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Sde_1460 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Sde_2941 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Sde_2072 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Sde_2683 glutamate synthase (NADPH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Sde_3948 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Sde_3041 Glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Sde_0146 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Sde_1238 DJ-1 K03152 thiJ; protein deglycase [EC:3.5.1.124]
D Sde_0123 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Sde_2893 Peptidoglycan-binding domain 1 K21470 ycbB; L,D-transpeptidase YcbB
D Sde_0516 hypothetical protein K25587 E3.4.17.25; glutathione-S-conjugate glycine hydrolase [EC:3.4.17.25]
D Sde_1056 Abortive infection protein K07052 K07052; CAAX protease family protein
D Sde_2629 Abortive infection protein K07052 K07052; CAAX protease family protein
D Sde_3350 Abortive infection protein K07052 K07052; CAAX protease family protein
D Sde_0760 aminopeptidase N. Metallo peptidase. MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Sde_1737 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Sde_0031 oligopeptidase A. Metallo peptidase. MEROPS family M03A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D Sde_1857 peptidase M16-like protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Sde_1689 peptidase M16-like protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Sde_1372 PepA aminopeptidase. Metallo peptidase. MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Sde_2607 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Sde_2321 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Sde_2601 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Sde_3513 aminopeptidase P. Metallo peptidase. MEROPS family M24B K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Sde_2720 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Sde_3142 HtpX peptidase. Metallo peptidase. MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Sde_2576 peptidase M48, Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D Sde_2590 RseP peptidase. Metallo peptidase. MEROPS family M50B K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Sde_3235 peptidase, M50 family K16922 yydH; putative peptide zinc metalloprotease protein
D Sde_2615 TonB-like protein K02172 blaR1; bla regulator protein blaR1
D Sde_3927 cbm6F; peptidyl-Asp metallopeptidase. Metallo peptidase. MEROPS family M72 K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33]
D Sde_3050 hypothetical protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Sde_1548 SEC-C motif K09933 mtfA; MtfA peptidase
D Sde_2247 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_3093 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_3731 Peptidase S1C, Do K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D Sde_3167 peptidase S1 and S6, chymotrypsin/Hap K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D Sde_3325 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Sde_3337 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Sde_1608 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Sde_2752 putative ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Sde_1610 Lon-A peptidase. Serine peptidase. MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Sde_1787 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Sde_0576 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Sde_2245 signal peptidase I. Serine peptidase. MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Sde_3849 Peptidase S26A, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Sde_0552 prolyl aminopeptidase. Serine peptidase. MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Sde_0492 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Sde_1994 C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Sde_0897 signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D Sde_1622 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D Sde_2016 sohB peptidase. Serine peptidase. MEROPS family S49 K04774 sohB; serine protease SohB [EC:3.4.21.-]
D Sde_1735 transcriptional regulator, GntR family K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D Sde_1225 Rhomboid-like protein K07059 K07059; rhomboid family protein
D Sde_2697 HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Sde_1303 gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03 K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Sde_1363 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Sde_0602 alpha-2-macroglobulin-like protein K06894 yfhM; alpha-2-macroglobulin
D Sde_2664 HflC protein K04087 hflC; modulator of FtsH protease HflC
D Sde_2665 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:sde01003]
D Sde_0991 glycogen synthase-like protein K00703 glgA; starch synthase [EC:2.4.1.21]
D Sde_0603 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Sde_0825 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D Sde_2692 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Sde_3798 b-glycosyltransferase-like protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Sde_2133 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Sde_0485 a-glycosyltransferase-like protein K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393]
D Sde_3209 a-glycosyltransferase-like protein K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sde01005]
D Sde_2585 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Sde_2584 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Sde_0854 lpx11A; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Sde_2587 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Sde_1769 phosphoesterase, PA-phosphatase related K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D Sde_1900 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Sde_2059 lipid-A-disaccharide synthase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Sde_0014 htrB; lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Sde_2623 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Sde_0386 putative CMP-KDO KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Sde_1244 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Sde_2058 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Sde_3175 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Sde_3174 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Sde_1100 heptosyltransferase-like protein K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Sde_3740 a-glycosyltransferase-like protein K12989 lpcC; mannosyltransferase [EC:2.4.1.-]
D Sde_3147 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Sde_0135 b-glycosyltransferase-like protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Sde_2133 glycosyl transferase, family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sde01011]
D Sde_3170 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Sde_2056 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Sde_0849 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Sde_0846 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Sde_0843 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Sde_0850 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Sde_0914 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Sde_1613 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Sde_0845 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Sde_0848 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Sde_2232 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Sde_1657 phosphoesterase, PA-phosphatase related K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Sde_2568 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Sde_2692 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Sde_0825 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D Sde_0603 putative bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D Sde_3341 PAS/PAC sensor signal transduction histidine kinase / peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Sde_0842 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Sde_3337 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Sde_2893 Peptidoglycan-binding domain 1 K21470 ycbB; L,D-transpeptidase YcbB
D Sde_3050 hypothetical protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D Sde_0123 peptidase C60, sortase A and B K07284 srtA; sortase A [EC:3.4.22.70]
D Sde_1778 putative lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Sde_3339 putative lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Sde_2024 putative lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Sde_1477 lytic murein transglycosylase-like protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D Sde_1633 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Sde_3338 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Sde_2670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Sde_0876 N-acetylmuramoyl-L-alanine amidase, family 2 K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:sde01004]
D Sde_1628 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Sde_0626 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Sde_1603 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D Sde_0998 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Sde_1631 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Sde_2457 fabB; beta-ketoacyl-acyl carrier protein synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Sde_1629 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Sde_3281 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Sde_0999 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D Sde_2586 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Sde_2625 short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D Sde_3444 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Sde_2001 Palmitoyl-CoA hydrolase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D Sde_3758 thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D Sde_1067 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Sde_0006 acsA; bifunctional acetoacetyl-CoA synthase/AMP-(Fatty) acid ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D Sde_1886 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Sde_1627 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Sde_0011 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:sde01008]
D Sde_0687 2-nitropropane dioxygenase, NPD K15329 pksE; trans-AT polyketide synthase, acyltransferase and oxidoreductase domains
D Sde_1764 beta-lactamase-like protein K05555 actIV; cyclase [EC:4.-.-.-]
D Sde_3725 Amino acid adenylation K15395 ftdB; hybrid polyketide synthase / nonribosomal peptide synthetase FtdB
D Sde_3398 Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D Sde_3401 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D Sde_3399 AMP-dependent synthetase and ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D Sde_2997 Integrins alpha chain K21162 sgcE4; enediyne biosynthesis protein E4
C 01006 Prenyltransferases [BR:sde01006]
D Sde_3221 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Sde_1007 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Sde_2593 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Sde_2668 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Sde_3837 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Sde_0044 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:sde01007]
D Sde_1496 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Sde_1902 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Sde_3373 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Sde_1088 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Sde_2228 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Sde_1903 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Sde_2379 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Sde_2398 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Sde_2566 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Sde_1369 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Sde_3308 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Sde_1217 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Sde_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Sde_1435 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Sde_0013 glyQ; Glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Sde_0012 glyS; Glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Sde_1697 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Sde_0909 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Sde_1577 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Sde_1299 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Sde_1581 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Sde_1582 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Sde_1232 aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D Sde_0903 aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D Sde_1164 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Sde_2603 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Sde_1012 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Sde_3138 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Sde_2440 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Sde_1644 4-aminobutyrate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Sde_1190 aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D Sde_2227 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Sde_0827 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Sde_0388 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_3057 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Sde_1332 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Sde_2128 CheW protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sde00194]
D Sde_3965 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Sde_3966 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Sde_3967 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Sde_3968 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Sde_3969 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Sde_3970 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Sde_3971 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Sde_3972 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Sde_3973 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sde03000]
D Sde_3619 histidine kinase K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D Sde_3953 transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D Sde_3879 Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Sde_2540 transcriptional regulator, LysR family K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D Sde_0637 metal dependent phosphohydrolase K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D Sde_2804 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D Sde_3265 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D Sde_3718 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Sde_1667 LysR, substrate-binding K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D Sde_2875 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Sde_1396 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Sde_0686 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Sde_3042 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Sde_0506 transcriptional regulator, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D Sde_0905 transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D Sde_1270 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Sde_0954 transcriptional regulator, GntR family K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D Sde_3674 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D Sde_1924 transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D Sde_1320 regulatory protein, TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Sde_0361 regulatory protein, TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Sde_0068 regulatory protein, TetR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Sde_0293 regulatory protein, TetR K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D Sde_2299 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Sde_0994 regulatory protein, LuxR K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D Sde_1950 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Sde_3941 regulatory protein, MerR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Sde_1934 regulatory protein, MerR K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D Sde_2736 ferric-uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Sde_1974 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Sde_0059 transcriptional regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D Sde_0755 cyclic nucleotide-binding K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Sde_1987 cyclic nucleotide-binding K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Sde_1464 cyclic nucleotide-binding K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Sde_1412 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Sde_0101 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Sde_3781 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Sde_2292 transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D Sde_0379 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D Sde_2616 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Sde_0915 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Sde_0807 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Sde_2787 helix-turn-helix motif K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Sde_2194 sigma-54 factor, interaction region K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D Sde_3817 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D Sde_1311 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Sde_4009 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Sde_2745 phage transcriptional regulator, AlpA K07733 alpA; prophage regulatory protein
D Sde_3707 negative transcriptional regulator K07734 paiB; transcriptional regulator
D Sde_3637 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D Sde_3372 RNA polymerase-binding, DksA K06204 dksA; RNA polymerase-binding transcription factor
D Sde_3459 nrdR; Transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D Sde_0839 mraZ; MraZ family protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:sde03021]
D Sde_0984 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Sde_0924 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Sde_0925 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Sde_3696 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sde_0716 RNA polymerase sigma factor RpoD-like protein K03086 rpoD; RNA polymerase primary sigma factor
D Sde_1253 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D Sde_0297 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Sde_2251 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Sde_2407 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Sde_0799 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Sde_3895 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Sde_3594 CheW protein K03089 rpoH; RNA polymerase sigma-32 factor
D Sde_3179 sigma-54, DNA-binding K03092 rpoN; RNA polymerase sigma-54 factor
D Sde_2164 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Sde_1680 helicase-like protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D Sde_2709 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D Sde_3454 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D Sde_0919 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Sde_3160 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A
D Sde_3159 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D Sde_1112 response regulator receiver K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Sde_2250 Anti sigma-E protein RseA-like protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D Sde_2249 Negative regulator of sigma E activity-like protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D Sde_2248 Positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Sde_3372 RNA polymerase-binding, DksA K06204 dksA; RNA polymerase-binding transcription factor
D Sde_2727 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Sde_1235 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB
D Sde_3656 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:sde03019]
D Sde_1619 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Sde_3188 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Sde_2243 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Sde_1054 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Sde_2676 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Sde_0620 DEAD/DEAH box helicase-like protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D Sde_3200 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Sde_1509 DEAD/DEAH box helicase-like protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Sde_3034 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Sde_1489 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Sde_1245 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Sde_2704 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Sde_3656 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Sde_2733 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Sde_0884 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Sde_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Sde_3654 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Sde_3376 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Sde_0347 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Sde_1301 carbon storage regulator K03563 csrA; carbon storage regulator
D Sde_3181 Uncharacterised P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ
D Sde_1109 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D Sde_1573 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:sde03011]
D Sde_2137 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Sde_2597 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Sde_0966 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Sde_0983 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Sde_0976 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Sde_1057 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6
D Sde_0927 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Sde_0973 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Sde_3163 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Sde_0959 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Sde_0982 SSU ribosomal protein S11P / histidine kinase K02948 RP-S11; small subunit ribosomal protein S11
D Sde_0926 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Sde_0981 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Sde_0972 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Sde_2705 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Sde_1203 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Sde_0968 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Sde_1058 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Sde_0964 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Sde_1013 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Sde_0719 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21
D Sde_0921 transcriptional regulator, GntR family / LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Sde_0963 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Sde_0960 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Sde_0961 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4
D Sde_0971 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Sde_0974 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Sde_1059 LSU ribosomal protein L9P / transcriptional regulator, GntR family K02939 RP-L9; large subunit ribosomal protein L9
D Sde_0922 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Sde_0920 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Sde_0923 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Sde_3164 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Sde_0969 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Sde_0978 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Sde_0967 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Sde_0985 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Sde_0975 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Sde_1206 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Sde_1580 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Sde_1008 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Sde_0965 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Sde_0962 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Sde_0970 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Sde_1009 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Sde_3679 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Sde_0977 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Sde_2693 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Sde_1626 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Sde_3680 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Sde_4017 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Sde_1579 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Sde_0980 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Sde_3257 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25
D Sde_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Sde_R0041 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Sde_R0043 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Sde_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Sde_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Sde_R0042 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sde03009]
D Sde_2243 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Sde_1558 protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Sde_2676 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Sde_2242 GTP-binding protein Era K03595 era; GTPase
D Sde_1010 GTP1/OBG subdomain K03979 obgE; GTPase [EC:3.6.5.-]
D Sde_3372 RNA polymerase-binding, DksA K06204 dksA; RNA polymerase-binding transcription factor
D Sde_2709 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D Sde_3454 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D Sde_0919 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Sde_1919 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Sde_3714 Pseudouridine synthase, Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Sde_0737 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Sde_0019 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Sde_1918 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Sde_3598 methyl-accepting chemotaxis sensory transducer K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Sde_0467 PAS/PAC sensor signal transduction histidine kinase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Sde_2222 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Sde_4011 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Sde_0840 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Sde_3144 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Sde_2612 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Sde_3916 ribosomal RNA methyltransferase RrmJ/FtsJ K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Sde_1475 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D Sde_1055 RNA methyltransferase TrmH, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Sde_1711 tRNA/rRNA methyltransferase (SpoU) K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Sde_2721 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Sde_0304 protein of unknown function DUF890 K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D Sde_3342 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Sde_0614 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Sde_1161 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Sde_1019 protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D Sde_1752 putative RNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D Sde_1153 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D Sde_1431 transcriptional regulator, Crp/Fnr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Sde_0126 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Sde_1651 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Sde_1914 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Sde_1722 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Sde_1620 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Sde_2551 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Sde_1683 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Sde_0782 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D Sde_2521 histidine kinase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Sde_2032 SSU ribosomal protein S6P modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D Sde_1204 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Sde_3331 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Sde_0810 LSU ribosomal protein L11P methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Sde_2092 modification methylase, HemK family K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D Sde_1674 Cupin 4 K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D Sde_1619 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12]
D Sde_3188 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Sde_3638 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Sde_0647 DEAD/DEAH box helicase-like protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D Sde_3034 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Sde_3711 DEAD/DEAH box helicase-like protein K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D Sde_2677 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Sde_1438 Small GTP-binding protein domain K03977 engA; GTPase
D Sde_1554 GTP-binding K14540 rbgA; ribosome biogenesis GTPase A
D Sde_2666 Small GTP-binding protein domain K03665 hflX; GTPase
D Sde_0024 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Sde_3697 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Sde_2707 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Sde_2710 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Sde_3343 Iojap-related protein K09710 ybeB; ribosome-associated protein
D Sde_3302 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Sde_2722 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D Sde_3184 protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein
D Sde_1751 ribosome modulation factor K03812 rmf; ribosome modulation factor
D Sde_0532 SSU ribosomal protein S30P / sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D Sde_3259 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
D Sde_1625 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:sde03016]
D Sde_0727 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Sde_0273 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Sde_1496 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Sde_0909 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Sde_2566 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Sde_3308 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Sde_2398 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Sde_1902 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Sde_2379 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Sde_1217 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Sde_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Sde_1299 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Sde_1577 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Sde_1697 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Sde_1903 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Sde_1369 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Sde_1435 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Sde_1581 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Sde_1582 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Sde_1088 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Sde_2228 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Sde_0546 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Sde_1298 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Sde_3592 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Sde_2822 protein of unknown function UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D Sde_2081 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Sde_2706 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Sde_1249 Pseudouridylate synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D Sde_1413 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Sde_0024 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Sde_2668 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Sde_4013 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Sde_4012 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Sde_3622 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D Sde_4016 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Sde_R0006 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Sde_2429 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D Sde_3683 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Sde_1120 RNAse R K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Sde_1338 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Sde_0416 ABC transporter related K06020 ettA; energy-dependent translational throttle protein EttA
D Sde_0013 glyQ; Glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Sde_0012 glyS; Glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Sde_3373 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Sde_1476 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Sde_1486 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Sde_0808 Dihydrouridine synthase TIM-barrel protein nifR3 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Sde_1304 dihydrouridine synthase, DuS K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D Sde_3300 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Sde_1853 methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Sde_2050 Methyltransferase type 11 K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Sde_1852 methyltransferase, putative K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D Sde_1859 Methyltransferase type 12 K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D Sde_1616 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D Sde_1205 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Sde_2003 tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Sde_1411 RNA methyltransferase TrmH, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D Sde_1557 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Sde_1130 RNA methyltransferase TrmH, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Sde_1651 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Sde_1914 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Sde_1677 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Sde_2225 PP-loop K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Sde_1155 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Sde_2575 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Sde_1418 HesB/YadR/YfhF K13628 iscA; iron-sulfur cluster assembly protein
D Sde_2255 glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D Sde_1895 tRNA--hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D Sde_2626 tRNA--hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D Sde_1471 protein of unknown function DUF752 K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D Sde_1405 S-adenosylmethionine K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Sde_2525 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Sde_2526 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Sde_1172 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Sde_2673 4Fe-4S cluster binding K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Sde_1406 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Sde_0503 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Sde_1237 transcriptional regulator, GntR family K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Sde_2233 YeaZ protein. Metallo peptidase. MEROPS family M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Sde_0720 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Sde_2671 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Sde_3049 UBA/THIF-type NAD/FAD binding fold K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Sde_1054 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Sde_2704 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:sde03012]
D Sde_2580 translation initiation factor 1 (eIF-1/SUI1) K03113 EIF1; translation initiation factor 1
D Sde_2708 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Sde_1578 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Sde_1623 ABC transporter related K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Sde_2596 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Sde_0929 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Sde_0931 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Sde_0928 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Sde_0930 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Sde_3251 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Sde_2594 ribosome recycling factor K02838 frr; ribosome recycling factor
D Sde_3250 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Sde_3258 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Sde_1688 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Sde_2821 Elongation factor P-like protein YeiP K02356 efp; elongation factor P
D Sde_1082 translation elongation factor P (EF-P) K02356 efp; elongation factor P
D Sde_1083 serine/threonine protein kinase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D Sde_1081 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D Sde_1157 protein of unknown function DUF462 K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D Sde_1216 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
D Sde_2519 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3
D Sde_0332 Class I peptide chain release factor K02839 prfH; peptide chain release factor
D Sde_3201 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:sde03110]
D Sde_1687 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Sde_2548 ATPase AAA-2 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Sde_1609 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Sde_2698 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Sde_2099 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Sde_2733 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Sde_0884 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Sde_2732 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Sde_1907 heat shock protein DnaJ-like protein K05801 djlA; DnaJ like chaperone protein
D Sde_3626 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Sde_2734 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Sde_2836 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Sde_1600 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D Sde_2837 heat shock protein Hsp20 K04080 ibpA; molecular chaperone IbpA
D Sde_3625 RNA-binding S4 K04762 hslR; ribosome-associated heat shock protein Hsp15
D Sde_0883 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Sde_2247 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_3093 peptidase S1 and S6, chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Sde_2720 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Sde_3972 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Sde_0497 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Sde_2726 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D Sde_0817 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D Sde_3325 peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Sde_3037 hex18A; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Sde_3271 hex18B; beta-N-acetylhexosaminidase / beta-hexosaminidase. Glycosyl Hydrolase family 20 K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D Sde_1714 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Sde_0253 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Sde_1901 transcriptional regulator, MerR family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Sde_1612 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Sde_3588 peptidylprolyl isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Sde_3694 peptidylprolyl isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Sde_1555 peptidylprolyl isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D Sde_2564 peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D Sde_1068 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Sde_0536 peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Sde_2637 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Sde_0739 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Sde_3655 trxA; thioredoxin K03671 TXN; thioredoxin
D Sde_1331 thioredoxin K05838 ybbN; putative thioredoxin
D Sde_0496 Glutaredoxin, GrxC K03676 grxC; glutaredoxin 3
D Sde_2438 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D Sde_0077 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Sde_3585 Disulphide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D Sde_1208 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Sde_1181 cytochrome c biogenesis protein, transmembrane region K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D Sde_1872 periplasmic protein thiol K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:sde04131]
D Sde_1430 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Sde_1379 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Sde_2062 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Sde_1308 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Sde_2099 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:sde04121]
C 03051 Proteasome [BR:sde03051]
D Sde_2099 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:sde03032]
D Sde_0066 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Sde_1611 bacterial nucleoid protein HU beta subunit K03530 hupB; DNA-binding protein HU-beta
D Sde_3836 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Sde_1583 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Sde_2135 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Sde_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Sde_1060 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Sde_0717 histidine kinase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Sde_0996 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Sde_1106 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Sde_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Sde_1371 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Sde_3310 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Sde_1652 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Sde_3411 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_2021 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_1335 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Sde_2583 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Sde_0073 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Sde_1881 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Sde_0896 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein
D Sde_2148 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Sde_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Sde_0398 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Sde_0374 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Sde_1783 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Sde_1542 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sde03036]
D Sde_2243 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Sde_1611 bacterial nucleoid protein HU beta subunit K03530 hupB; DNA-binding protein HU-beta
D Sde_3836 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Sde_1583 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Sde_2135 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Sde_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Sde_0665 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D Sde_1985 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein
D Sde_0807 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Sde_2667 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Sde_2299 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Sde_1447 37kDa nucleoid-associated protein K06899 ndpA; nucleoid-associated protein
D Sde_1879 condensin subunit Smc K03529 smc; chromosome segregation protein
D Sde_1720 condensin subunit ScpA K05896 scpA; segregation and condensation protein A
D Sde_1721 condensin subunit ScpB K06024 scpB; segregation and condensation protein B
D Sde_0852 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Sde_1246 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D Sde_3596 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Sde_0842 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Sde_1693 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Sde_0841 Cell division protein, FtsL -like protein K03586 ftsL; cell division protein FtsL
D Sde_0851 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Sde_0847 cell cycle protein K03588 ftsW; cell division protein FtsW
D Sde_3595 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Sde_0853 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Sde_1880 cell division protein ZipA K03528 zipA; cell division protein ZipA
D Sde_3516 cell division protein ZapA K09888 zapA; cell division protein ZapA
D Sde_3515 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D Sde_3165 AFG1-like ATPase K06916 zapE; cell division protein ZapE
D Sde_2670 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Sde_1119 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Sde_1786 hypothetical protein K13053 sulA; cell division inhibitor SulA
D Sde_3674 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D Sde_3192 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Sde_3191 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Sde_3190 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Sde_3340 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Sde_4010 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Sde_2157 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Sde_3113 putative partition-related protein K03496 parA; chromosome partitioning protein
D Sde_0878 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Sde_4009 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Sde_0398 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Sde_0374 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Sde_4012 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Sde_4011 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Sde_0466 phage integrase K04763 xerD; integrase/recombinase XerD
D Sde_2397 ParA family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Sde_0075 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:sde03400]
D Sde_0729 Deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Sde_1218 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Sde_0337 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Sde_2604 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Sde_0858 mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Sde_2506 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Sde_3879 Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D Sde_0555 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Sde_3681 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Sde_3671 histidine kinase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Sde_1995 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Sde_3689 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Sde_3125 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Sde_1213 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Sde_1881 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Sde_0073 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Sde_0993 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Sde_1753 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Sde_2053 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Sde_3764 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Sde_0924 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Sde_0925 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Sde_0984 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Sde_3696 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sde_1796 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Sde_1256 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Sde_2669 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Sde_2394 Exodeoxyribonuclease I subunit C K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D Sde_1458 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Sde_0198 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Sde_3220 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Sde_0197 conserved hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Sde_1106 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Sde_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Sde_1371 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Sde_3310 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Sde_1652 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Sde_3411 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_2021 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Sde_1335 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Sde_0996 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Sde_1288 recA protein K03553 recA; recombination protein RecA
D Sde_2534 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Sde_2533 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Sde_2535 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Sde_2694 transcription elongation factor GreA / replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Sde_0406 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Sde_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Sde_3717 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Sde_2241 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Sde_1337 recombination protein RecR K06187 recR; recombination protein RecR
D Sde_2735 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Sde_0474 putative exonuclease, RdgC K03554 rdgC; recombination associated protein RdgC
D Sde_2148 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Sde_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Sde_1783 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Sde_1611 bacterial nucleoid protein HU beta subunit K03530 hupB; DNA-binding protein HU-beta
D Sde_3836 bacterial nucleoid protein Hbs K03530 hupB; DNA-binding protein HU-beta
D Sde_0807 helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Sde_1583 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Sde_2135 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Sde_1489 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Sde_2507 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Sde_1787 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Sde_1511 DNA damage-inducible DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D Sde_1030 hypothetical protein K14160 imuA; protein ImuA
D Sde_1029 hypothetical protein K14161 imuB; protein ImuB
D Sde_1028 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Sde_1289 regulatory protein RecX K03565 recX; regulatory protein
D Sde_0184 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D Sde_2381 Helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Sde_2458 nrdA; ribonucleoside-diphosphate reductase class Ia alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Sde_2459 nrdB1; Class Ia ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Sde_3460 nrdB2; Class Ia ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:sde03029]
D Sde_3161 cytochrome b/b6-like protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Sde_2708 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2
D Sde_1578 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Sde_2596 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Sde_0929 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Sde_0931 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Sde_0928 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Sde_0930 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Sde_2242 GTP-binding protein Era K03595 era; GTPase
D Sde_1088 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Sde_3308 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Sde_0913 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Sde_2379 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Sde_3194 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Sde_3195 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Sde_3193 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Sde_0996 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Sde_2589 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Sde_2733 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Sde_2734 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Sde_0884 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Sde_0883 chaperonin Cpn10 K04078 groES; chaperonin GroES
D Sde_2732 Chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Sde_1413 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Sde_2438 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D Sde_2397 ParA family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Sde_0044 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Sde_0038 ctaG; cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Sde_0043 cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9]
D Sde_4014 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Sde_0041 conserved hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D Sde_0045 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Sde_2099 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sde02000]
D Sde_0387 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Sde_0526 ABC transporter related K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D Sde_1291 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Sde_1779 ABC transporter related K15738 uup; ABC transport system ATP-binding/permease protein
D Sde_2846 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Sde_2847 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Sde_2264 histidine kinase K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Sde_2265 binding-protein-dependent transport systems inner membrane component K15577 nrtB; nitrate/nitrite transport system permease protein
D Sde_2266 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Sde_1367 extracellular solute-binding protein, family 1 K11073 potF; putrescine transport system substrate-binding protein
D Sde_1364 binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein
D Sde_1365 binding-protein-dependent transport systems inner membrane component K11075 potH; putrescine transport system permease protein
D Sde_1366 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D Sde_2912 conserved hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Sde_1122 ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Sde_0403 ABC-type nitrate/sulfonate/bicarbonate transport system protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Sde_2489 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Sde_1123 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Sde_1124 ABC transporter related K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Sde_0766 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Sde_0769 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein
D Sde_0768 inner-membrane translocator K23509 ytfT; galactofuranose transport system permease protein
D Sde_0767 ABC transporter related K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Sde_3172 toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein
D Sde_2613 OmpA/MotB K02040 pstS; phosphate transport system substrate-binding protein
D Sde_3755 phosphate binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D Sde_3754 Phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Sde_3753 Phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Sde_3752 Phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Sde_0226 ABC-type branched-chain amino acid transport system, periplasmic component K11959 urtA; urea transport system substrate-binding protein
D Sde_2975 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K11959 urtA; urea transport system substrate-binding protein
D Sde_0227 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Sde_2974 inner-membrane translocator K11960 urtB; urea transport system permease protein
D Sde_2973 inner-membrane translocator K11961 urtC; urea transport system permease protein
D Sde_0228 inner-membrane translocator K11961 urtC; urea transport system permease protein
D Sde_2972 ABC transporter related K11962 urtD; urea transport system ATP-binding protein
D Sde_0229 histidine kinase K11962 urtD; urea transport system ATP-binding protein
D Sde_2971 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D Sde_0230 ABC transporter related K11963 urtE; urea transport system ATP-binding protein
D Sde_2909 extracellular solute-binding protein, family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Sde_2027 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2028 extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D Sde_2029 binding-protein-dependent transport systems inner membrane component K15581 oppB; oligopeptide transport system permease protein
D Sde_2030 binding-protein-dependent transport systems inner membrane component K15582 oppC; oligopeptide transport system permease protein
D Sde_2031 ABC transporter related K10823 oppF; oligopeptide transport system ATP-binding protein
D Sde_3205 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Sde_3203 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Sde_3202 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Sde_1451 ABC transporter related K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Sde_0060 transcriptional regulator, XRE family K09815 znuA; zinc transport system substrate-binding protein
D Sde_0057 ABC-3 K09816 znuB; zinc transport system permease protein
D Sde_0058 ABC transporter related K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Sde_1373 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D Sde_1374 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein
D Sde_3178 PAS/PAC sensor signal transduction histidine kinase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Sde_3735 ABC-type Na+ efflux pump permease component-like protein K09696 natB; sodium transport system permease protein
D Sde_3736 ABC transporter related K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Sde_2841 ABC transporter, inner membrane protein K25151 gldF; gliding motility-associated transport system permease protein
D Sde_2842 ABC transporter related K25152 gldA; gliding motility-associated transport system ATP-binding protein
D Sde_1809 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Sde_1811 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Sde_1810 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Sde_1869 heme exporter protein D K02196 ccmD; heme exporter protein D
D Sde_1868 heme exporter protein CcmC K02195 ccmC; heme exporter protein C
D Sde_1867 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D Sde_1866 heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Sde_3595 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Sde_3596 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Sde_3609 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Sde_3523 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Sde_3608 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Sde_1171 ABC-2 family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Sde_2924 ABC-2 family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Sde_3610 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Sde_3524 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Sde_1170 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Sde_2923 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Sde_1971 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_2783 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_3446 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_0330 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_2281 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_2282 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_1758 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_1759 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Sde_1972 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Sde_2784 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Sde_0308 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Sde_0329 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Sde_2280 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Sde_3445 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Sde_1757 ABC transporter related K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Sde_1415 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Sde_1358 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Sde_0035 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Sde_0537 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Sde_3527 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump
D Sde_2649 Sugar transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D Sde_2634 Sugar transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D Sde_1017 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Sde_3038 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D Sde_3834 major facilitator superfamily MFS_1 K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D Sde_3282 major facilitator superfamily MFS_1 K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D Sde_2090 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Sde_2277 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Sde_2278 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Sde_0879 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Sde_3490 Drug resistance transporter EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Sde_0348 Phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D Sde_3182 Phosphotransferase system, HPr K08485 ptsO; phosphocarrier protein NPr
D Sde_3180 response regulator receiver sensor signal transduction histidine kinase K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Sde_2579 Ion transport protein K10716 kch; voltage-gated potassium channel
D Sde_3864 Ion transport protein K10716 kch; voltage-gated potassium channel
D Sde_1761 Ion transport protein K08714 VGSC; voltage-gated sodium channel
D Sde_1904 Ion transport protein K08714 VGSC; voltage-gated sodium channel
D Sde_2065 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Sde_0233 Rh-like protein/ammonium transporter K03320 amt; ammonium transporter, Amt family
D Sde_2979 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_0362 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3206 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3433 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3528 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3827 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3979 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_0800 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Sde_3160 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A
D Sde_1743 TPR repeat K07114 yfbK; Ca-activated chloride channel homolog
D Sde_1744 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D Sde_0122 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D Sde_0824 von Willebrand factor, type A K07114 yfbK; Ca-activated chloride channel homolog
D Sde_1618 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease
D Sde_2826 formate/nitrite transporter K21993 fdhC; formate transporter
D Sde_2402 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Sde_0246 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Sde_0585 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Sde_2989 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Sde_3472 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D Sde_0266 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Sde_1791 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D Sde_3183 magnesium transporter K06213 mgtE; magnesium transporter
D Sde_3911 serine/threonine protein kinase K06213 mgtE; magnesium transporter
D Sde_3219 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_2159 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_3218 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Sde_2158 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Sde_2427 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY
D Sde_2061 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Sde_0353 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Sde_0354 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Sde_2815 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Sde_2816 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Sde_2957 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Sde_3563 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Sde_0355 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Sde_2060 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Sde_2532 MotA/TolQ/ExbB proton channel K03562 tolQ; biopolymer transport protein TolQ
D Sde_2531 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D Sde_0125 Mg2+ transporter protein, CorA-like protein K16074 zntB; zinc transporter
D Sde_1696 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Sde_1200 metal dependent phosphohydrolase K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Sde_2968 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Sde_3875 phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP
D Sde_0586 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Sde_0285 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Sde_0119 OmpA-like transmembrane region K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Sde_3591 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Sde_2813 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D Sde_0628 btuB; Vitamin B12 transporter BtuB precursor K16092 btuB; vitamin B12 transporter
D Sde_0721 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D Sde_2798 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D Sde_2640 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Sde_0510 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Sde_3790 TonB-dependent receptor, plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D Sde_3030 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Sde_1978 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1896 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2289 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2882 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3833 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3611 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3729 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3035 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2998 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2885 histidine kinase K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2390 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1508 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2288 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1263 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1264 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1279 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2652 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2991 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_2502 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1386 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_0889 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_0559 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_0952 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_0587 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_0682 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_0696 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1441 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3880 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3332 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3052 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3318 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_3405 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_4006 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Sde_1958 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Sde_3766 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Sde_0366 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Sde_1293 Type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system
D Sde_2449 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D Sde_1576 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Sde_0132 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Sde_3795 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D Sde_2589 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Sde_1437 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB
D Sde_2621 Uncharacterized lipoprotein-like protein K07287 bamC; outer membrane protein assembly factor BamC
D Sde_2552 competence lipoprotein ComL, putative K05807 bamD; outer membrane protein assembly factor BamD
D Sde_2737 SmpA/OmlA K06186 bamE; outer membrane protein assembly factor BamE
D Sde_0071 surface antigen (D15) K07278 tamA; translocation and assembly module TamA
D Sde_0070 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB
D Sde_2873 alg6A; putative modular alginate lyase K21449 ata; trimeric autotransporter adhesin
D Sde_3177 OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA
D Sde_3176 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC
D Sde_0740 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D Sde_3309 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D Sde_3303 CBS domain protein K06189 corC; hemolysin (HlyC) family protein
D Sde_0599 major facilitator superfamily MFS_1 K16211 malY; maltose/moltooligosaccharide transporter
D Sde_1954 transcriptional regulator, Crp/Fnr family K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Sde_1955 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein
D Sde_3768 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein
D Sde_1931 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D Sde_3935 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D Sde_1118 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Sde_0728 protein of unknown function DUF6, transmembrane K15269 pecM; probable blue pigment (indigoidine) exporter
D Sde_3996 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Sde_1892 gluconate transporter K06157 idnT; Gnt-II system L-idonate transporter
D Sde_2865 L-lactate permease K03303 lutP; lactate permease
D Sde_3173 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D Sde_1194 Na+/solute symporter K11928 putP; sodium/proline symporter
D Sde_3155 Na+/solute symporter K14393 actP; cation/acetate symporter
D Sde_1762 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Sde_3264 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Sde_3699 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Sde_2020 Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D Sde_1020 sodium/hydrogen exchanger K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D Sde_1457 Potassium efflux system protein K03455 KEA1_2_3; K+:H+ antiporter
D Sde_0017 trkH; K+ transporter TrkH protein precursor K03498 trkH; trk/ktr system potassium uptake protein
D Sde_0018 trkA; K+ transporter TrkA uptake protein precursor K03499 trkA; trk/ktr system potassium uptake protein
D Sde_0832 Cl-channel, voltage gated K03281 clcA; chloride channel protein, CIC family
D Sde_3884 Chromate transporter K07240 chrA; chromate transporter
D Sde_1231 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Sde_3779 Bile acid:sodium symporter K03325 ACR3; arsenite transporter
D Sde_2568 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Sde_2574 protein of unknown function UPF0118 K03548 perM; putative permease
D Sde_3071 MCP methyltransferase, CheR-type K05595 marC; multiple antibiotic resistance protein
D Sde_0847 cell cycle protein K03588 ftsW; cell division protein FtsW
D Sde_1953 iron permease FTR1 K07243 FTR; high-affinity iron transporter
D Sde_3602 MtN3 and saliva related transmembrane protein K15383 K15383; MtN3 and saliva related transmembrane protein
D Sde_2614 TonB-like protein K03832 tonB; periplasmic protein TonB
D Sde_0356 TonB-like protein K03832 tonB; periplasmic protein TonB
D Sde_3636 TonB-like protein K03832 tonB; periplasmic protein TonB
D Sde_2512 TonB-like protein K03832 tonB; periplasmic protein TonB
D Sde_0113 TonB-like protein K03832 tonB; periplasmic protein TonB
D Sde_3402 TonB-like protein K03832 tonB; periplasmic protein TonB
D Sde_2528 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein
D Sde_2530 TonB-like protein K03646 tolA; colicin import membrane protein
D Sde_2508 hypothetical protein K03646 tolA; colicin import membrane protein
D Sde_2529 TolB-like protein K03641 tolB; TolB protein
D Sde_1307 Oxaloacetate decarboxylase K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Sde_1306 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Sde_1305 sodium pump decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D Sde_3489 secretion protein HlyD K03543 emrA; membrane fusion protein, multidrug efflux system
D Sde_3767 biotin/lipoyl attachment K15727 czcB; membrane fusion protein, heavy metal efflux system
D Sde_1956 putative RND efflux system protein, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D Sde_1930 secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Sde_3936 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Sde_1292 Type I secretion membrane fusion protein, HlyD K12542 lapC; membrane fusion protein, adhesin transport system
D Sde_1119 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Sde_3933 secretion protein HlyD K07799 mdtA; membrane fusion protein, multidrug efflux system
D Sde_0748 transcriptional regulator, XRE family K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Sde_0133 lipopolysaccharide biosynthesis K25590 epsF; protein tyrosine kinase modulator
D Sde_3407 Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D Sde_3382 FeoA K04758 feoA; ferrous iron transport protein A
D Sde_3383 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Sde_1871 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D Sde_0259 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Sde_0548 PAS/PAC sensor signal transduction histidine kinase K07274 mipA; MipA family protein
D Sde_2450 MltA-interacting MipA K07274 mipA; MipA family protein
D Sde_2703 MltA-interacting MipA K07274 mipA; MipA family protein
D Sde_0288 MltA-interacting MipA K07274 mipA; MipA family protein
D Sde_3721 MltA-interacting MipA K07274 mipA; MipA family protein
C 02044 Secretion system [BR:sde02044]
D Sde_0366 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Sde_1291 ABC transporter related K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D Sde_1292 Type I secretion membrane fusion protein, HlyD K12542 lapC; membrane fusion protein, adhesin transport system
D Sde_1293 Type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system
D Sde_1148 Peptidoglycan-binding domain 1 K02450 gspA; general secretion pathway protein A
D Sde_1147 hypothetical protein K02451 gspB; general secretion pathway protein B
D Sde_3581 type II secretion system protein C K02452 gspC; general secretion pathway protein C
D Sde_1343 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D Sde_3580 type II and III secretion system protein K02453 gspD; general secretion pathway protein D
D Sde_3579 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Sde_0364 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Sde_1345 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Sde_3578 General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D Sde_3577 General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D Sde_3466 hypothetical protein K02456 gspG; general secretion pathway protein G
D Sde_3576 General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D Sde_3575 General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D Sde_3574 General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D Sde_3573 General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D Sde_3572 General secretion pathway L K02461 gspL; general secretion pathway protein L
D Sde_3571 General secretion pathway M protein K02462 gspM; general secretion pathway protein M
D Sde_3570 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D Sde_0861 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Sde_1078 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Sde_0864 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Sde_0863 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Sde_0862 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Sde_1346 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Sde_2557 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D Sde_1432 Tetratricopeptide TPR_2 K02656 pilF; type IV pilus assembly protein PilF
D Sde_3634 response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG
D Sde_0522 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3633 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3632 CheW-like protein K02659 pilI; twitching motility protein PilI
D Sde_0521 hypothetical protein K02659 pilI; twitching motility protein PilI
D Sde_3631 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Sde_0520 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Sde_3630 Protein-glutamate O-methyltransferase K02661 pilK; type IV pilus assembly protein PilK
D Sde_2691 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Sde_2690 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN
D Sde_2689 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO
D Sde_2688 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP
D Sde_2687 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Sde_3640 twitching motility protein K02669 pilT; twitching motility protein PilT
D Sde_3639 twitching motility protein K02670 pilU; twitching motility protein PilU
D Sde_1362 twitching motility protein K02670 pilU; twitching motility protein PilU
D Sde_2561 Tfp pilus assembly protein PilV-like protein K02671 pilV; type IV pilus assembly protein PilV
D Sde_2560 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D Sde_2559 Tfp pilus assembly protein PilX-like protein K02673 pilX; type IV pilus assembly protein PilX
D Sde_2558 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein K02674 pilY1; type IV pilus assembly protein PilY1
D Sde_1653 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D Sde_2019 conserved hypothetical protein K27041 fimL; scaffold protein FimL
D Sde_2556 Tfp pilus assembly protein FimT-like protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D Sde_2082 Tfp pilus assembly protein FimV-like protein K08086 fimV; pilus assembly protein FimV
D Sde_1142 conserved hypothetical protein K10926 mshC; MSHA pilin protein MshC
D Sde_1143 N-terminal methylation site K10927 mshD; MSHA pilin protein MshD
D Sde_1138 type II secretion system protein E K12276 mshE; MSHA biogenesis protein MshE
D Sde_1139 type II secretion system protein K12278 mshG; MSHA biogenesis protein MshG
D Sde_1131 conserved hypothetical protein K12279 mshI; MSHA biogenesis protein MshI
D Sde_1133 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ
D Sde_1134 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK
D Sde_1135 type II and III secretion system protein K12282 mshL; MSHA biogenesis protein MshL
D Sde_1136 type II secretory pathway, component ExeA (predicted ATPase) K12283 mshM; MSHA biogenesis protein MshM
D Sde_1342 ATPase K12283 mshM; MSHA biogenesis protein MshM
D Sde_1137 hypothetical protein K12284 mshN; MSHA biogenesis protein MshN
D Sde_1144 conserved hypothetical protein K12285 mshO; MSHA biogenesis protein MshO
D Sde_1145 conserved hypothetical protein K12286 mshP; MSHA biogenesis protein MshP
D Sde_1146 PA14 K12287 mshQ; MSHA biogenesis protein MshQ
D Sde_3643 protein of unknown function YGGT K02221 yggT; YggT family protein
D Sde_2142 Competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA
D Sde_1702 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Sde_2167 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Sde_2169 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Sde_1864 uncharacterized flagellar protein FhlB cytoplasmic domain K04061 flhB2; flagellar biosynthesis protein
D Sde_2188 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Sde_2186 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Sde_2185 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Sde_2174 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN
D Sde_2173 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D Sde_2172 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Sde_2171 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Sde_2170 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Sde_1208 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Sde_1522 ImcF-related K11891 impL; type VI secretion system protein ImpL
D Sde_1523 OmpA/MotB K11892 impK; type VI secretion system protein ImpK
D Sde_1524 protein of unknown function DUF876 K11893 impJ; type VI secretion system protein ImpJ
D Sde_1535 protein of unknown function DUF1305 K11895 impH; type VI secretion system protein ImpH
D Sde_1534 protein of unknown function DUF879 K11896 impG; type VI secretion system protein ImpG
D Sde_1533 protein of unknown function DUF1316 K11897 impF; type VI secretion system protein ImpF
D Sde_1530 protein of unknown function DUF877 K11900 impC; type VI secretion system protein ImpC
D Sde_1529 Uncharacterised conserved protein UCP028301 K11901 impB; type VI secretion system protein ImpB
D Sde_1528 ImpA-like protein K11902 impA; type VI secretion system protein ImpA
D Sde_1537 histidine kinase K11903 hcp; type VI secretion system secreted protein Hcp
D Sde_1538 two component transcriptional regulator, LuxR family K11904 vgrG; type VI secretion system secreted protein VgrG
D Sde_1525 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D Sde_1536 ATPase AAA-2 K11907 vasG; type VI secretion system protein VasG
D Sde_1521 conserved hypothetical protein K11890 impM; type VI secretion system protein ImpM
D Sde_1526 Forkhead-associated K11894 impI; type VI secretion system protein ImpI
D Sde_1532 virulence protein, SciE type K11898 impE; type VI secretion system protein ImpE
D Sde_1531 protein of unknown function DUF877 K11899 impD; type VI secretion system protein ImpD
D Sde_2434 protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D Sde_0856 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Sde_0497 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB
D Sde_1407 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Sde_0918 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE
D Sde_1408 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Sde_2716 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG
D Sde_0979 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Sde_1202 signal recognition particle subunit FFH/SRP54 (srp54) / transcription elongation factor GreB K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Sde_3597 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Sde_1662 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Sde_4014 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Sde_3224 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Sde_3225 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Sde_3226 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:sde02042]
D Sde_1200 metal dependent phosphohydrolase K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Sde_2968 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:sde02022]
D Sde_3839 ATP-binding region, ATPase-like protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Sde_3838 Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Sde_3354 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Sde_3353 response regulator receiver K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Sde_0550 two component transcriptional regulator, winged helix family K07661 rstA; two-component system, OmpR family, response regulator RstA
D Sde_0290 response regulator receiver K07661 rstA; two-component system, OmpR family, response regulator RstA
D Sde_2723 ATP-binding region, ATPase-like protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D Sde_2724 response regulator receiver K07664 baeR; two-component system, OmpR family, response regulator BaeR
D Sde_1949 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Sde_1948 Heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Sde_1015 ATP-binding region, ATPase-like protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D Sde_0551 ATP-binding region, ATPase-like protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Sde_1016 response regulator receiver K02483 K02483; two-component system, OmpR family, response regulator
D Sde_2240 ATP-binding region, ATPase-like protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Sde_2054 response regulator receiver K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Sde_3821 histidine kinase, dimerisation and phosphoacceptor region K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Sde_3820 two component transcriptional regulator, LuxR family K07693 desR; two-component system, NarL family, response regulator DesR
D Sde_3669 Sensory transduction protein kinase AlgZ K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Sde_3668 Two-component response regulator AlgR K08083 algR; two-component system, LytTR family, response regulator AlgR
D Sde_0479 histidine kinase internal region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Sde_3901 histidine kinase internal region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Sde_0480 response regulator receiver K02477 K02477; two-component system, LytTR family, response regulator
D Sde_3733 LytTr DNA-binding region K02477 K02477; two-component system, LytTR family, response regulator
D Sde_3900 response regulator receiver K02477 K02477; two-component system, LytTR family, response regulator
D Sde_3000 LytTr DNA-binding region K02477 K02477; two-component system, LytTR family, response regulator
D Sde_0500 PAS/PAC sensor signal transduction histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Sde_0499 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Sde_3375 Two-component response regulator CbrB K07713 zraR; two-component system, NtrC family, response regulator HydG
D Sde_2554 Sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Sde_2555 Two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D Sde_0525 formyl transferase-like protein K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX
D Sde_1360 ATP-binding region, ATPase-like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_1728 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_3803 ATP-binding region, ATPase-like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_3809 ATP-binding region, ATPase-like protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Sde_0749 sigma-54 factor, interaction region K02481 flgR; two-component system, NtrC family, response regulator
D Sde_3107 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_2161 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_3108 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_2163 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_1309 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_3102 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_2160 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_3046 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Sde_2215 CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Sde_3629 response regulator receiver K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Sde_3634 response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG
D Sde_0522 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3633 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3628 CheB methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D Sde_3115 PAS/PAC sensor signal transduction histidine kinase K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D Sde_2192 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D Sde_2191 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC
D Sde_2881 ATP-binding region, ATPase-like protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Sde_2880 response regulator receiver protein K15012 regA; two-component system, response regulator RegA
D Sde_1089 Signal transduction histidine kinase-like protein K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D Sde_2178 Hpt K20976 hptB; histidine phosphotransfer protein HptB
D Sde_2179 Stage II sporulation E K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D Sde_3118 response regulator receiver K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D Sde_2488 ATP-binding region, ATPase-like protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:sde02035]
D Sde_3107 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_2161 ATP-binding region, ATPase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Sde_2155 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_2156 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_3106 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW
D Sde_0393 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Sde_3103 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Sde_2214 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Sde_3104 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Sde_3102 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_2160 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Sde_3046 MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D Sde_3108 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_2163 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_1309 response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Sde_2162 Chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D Sde_2215 CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Sde_1108 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_0391 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3105 PAS domain protein K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3112 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_0081 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_2316 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_3111 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Sde_2186 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Sde_2185 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Sde_2184 Flagellar export FliJ K02413 fliJ; flagellar protein FliJ
D Sde_2173 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ
D Sde_2172 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Sde_2171 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Sde_2170 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Sde_2167 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Sde_2169 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Sde_2187 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Sde_2175 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Sde_2174 Flagellar motor switch FliN K02417 fliN; flagellar motor switch protein FliN
D Sde_2188 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Sde_2206 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Sde_2216 Flageller protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Sde_2207 Hpt sensor hybrid histidine kinase K02393 flgH; flagellar L-ring protein FlgH
D Sde_2176 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Sde_3584 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Sde_2189 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE
D Sde_2177 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D Sde_2213 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Sde_2212 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Sde_2211 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Sde_2209 Flagellar basal-body rod FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Sde_2208 Flagellar basal-body rod FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Sde_2205 putative N-acetylmuramidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Sde_2210 flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE
D Sde_2204 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D Sde_2203 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D Sde_2218 FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D Sde_2427 OmpA/MotB K21218 motY; sodium-type flagellar protein MotY
D Sde_2200 flagellin-like protein K02406 fliC; flagellin
D Sde_2202 flagellin-like protein K02406 fliC; flagellin
D Sde_2198 flagellar hook-associated 2-like protein K02407 fliD; flagellar hook-associated protein 2
D Sde_2197 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Sde_2196 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Sde_2164 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Sde_3219 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_2159 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Sde_3218 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Sde_2158 OmpA/MotB K02557 motB; chemotaxis protein MotB
D Sde_2194 sigma-54 factor, interaction region K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D Sde_2192 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D Sde_2191 sigma-54 factor, interaction region K10943 flrC; two-component system, response regulator FlrC
D Sde_2217 Anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Sde_2199 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D Sde_2166 GTP-binding signal recognition particle SRP54, G-domain K02404 flhF; flagellar biosynthesis protein FlhF
D Sde_2165 Cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D Sde_3634 response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG
D Sde_0522 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3633 response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH
D Sde_3632 CheW-like protein K02659 pilI; twitching motility protein PilI
D Sde_0521 hypothetical protein K02659 pilI; twitching motility protein PilI
D Sde_3631 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Sde_0520 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Sde_3630 Protein-glutamate O-methyltransferase K02661 pilK; type IV pilus assembly protein PilK
D Sde_3629 response regulator receiver K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Sde_2555 Two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D Sde_2554 Sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Sde_3640 twitching motility protein K02669 pilT; twitching motility protein PilT
D Sde_3639 twitching motility protein K02670 pilU; twitching motility protein PilU
D Sde_1362 twitching motility protein K02670 pilU; twitching motility protein PilU
D Sde_3628 CheB methylesterase K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D Sde_3627 CheW-like protein K06598 chpC; chemosensory pili system protein ChpC
D Sde_1078 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Sde_0864 conserved hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Sde_0863 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Sde_0862 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Sde_1346 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC
D Sde_0861 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Sde_1432 Tetratricopeptide TPR_2 K02656 pilF; type IV pilus assembly protein PilF
D Sde_2687 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Sde_2688 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP
D Sde_2689 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO
D Sde_2690 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN
D Sde_2691 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Sde_1653 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D Sde_2561 Tfp pilus assembly protein PilV-like protein K02671 pilV; type IV pilus assembly protein PilV
D Sde_2560 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D Sde_2559 Tfp pilus assembly protein PilX-like protein K02673 pilX; type IV pilus assembly protein PilX
D Sde_2558 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein K02674 pilY1; type IV pilus assembly protein PilY1
D Sde_2557 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sde04812]
D Sde_3192 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Sde_0853 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Sde_0852 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Sde_4010 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Sde_2157 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Sde_3113 putative partition-related protein K03496 parA; chromosome partitioning protein
D Sde_0878 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D Sde_4009 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sde04147]
D Sde_2099 heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Sde_1245 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Sde_1379 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Sde_0473 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Sde_1308 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Sde_1714 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Sde_0253 peptidyl-prolyl cis-trans isomerase, cyclophilin type K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Sde_2430 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Sde_0884 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Sde_2733 Chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Sde_1006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Sde_1459 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Sde_0929 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Sde_0931 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Sde_1298 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Sde_1886 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Sde_3149 Acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Sde_0469 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Sde_2235 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Sde_3670 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Sde_2423 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Sde_1278 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Sde_1097 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Sde_0987 putative 1,4-a-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Sde_1480 carbohydrate kinase, FGGY K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Sde_0502 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Sde_0654 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Sde_0891 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Sde_0655 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Sde_1333 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_3388 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Sde_0806 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Sde_2104 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Sde_1997 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Sde_1380 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Sde_3277 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_0693 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_2717 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Sde_2062 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:sde02048]
D Sde_1844 Addiction module toxin, Txe/YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Sde_1845 Prevent-host-death protein K19159 yefM; antitoxin YefM
D Sde_0092 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Sde_2039 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D Sde_3989 CcdB protein K19163 ccdB; toxin CcdB
D Sde_3990 Post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA
D Sde_2750 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4
D Sde_2786 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D Sde_2787 helix-turn-helix motif K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D Sde_0853 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Sde_3192 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Sde_0398 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Sde_0374 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Sde_1496 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Sde_2253 hypothetical protein K19168 cptA; toxin CptA
D Sde_2254 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D Sde_1413 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:sde04090]
C 01504 Antimicrobial resistance genes [BR:sde01504]
D Sde_1840 Gentamicin 3'-N-acetyltransferase K03395 aac3-I; aminoglycoside 3-N-acetyltransferase I [EC:2.3.1.60]
D Sde_2615 TonB-like protein K02172 blaR1; bla regulator protein blaR1
D Sde_2616 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Sde_1949 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Sde_1948 Heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Sde_3354 ATP-binding region, ATPase-like protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D Sde_3353 response regulator receiver K07660 phoP; two-component system, OmpR family, response regulator PhoP
D Sde_1119 secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Sde_1118 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Sde_2449 outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D Sde_1950 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Sde_3941 regulatory protein, MerR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Sde_0366 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:sde00536]
D Sde_3124 retaining b-glycosidase-like protein K07964 HPSE; heparanase [EC:3.2.1.166]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sde00537]
D Sde_0655 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sde03100]
D Sde_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Sde_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Sde_R0034 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0038 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Sde_R0024 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Sde_R0002 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Sde_R0030 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Sde_R0031 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Sde_R0037 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Sde_R0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Sde_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Sde_R0009 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Sde_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Sde_R0035 tRNA-His K14226 tRNA-His; tRNA His
D Sde_R0045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Sde_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Sde_R0039 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Sde_R0040 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Sde_R0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D Sde_R0005 tRNA-Met K14230 tRNA-Met; tRNA Met
D Sde_R0046 tRNA-Met K14230 tRNA-Met; tRNA Met
D Sde_R0004 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Sde_R0033 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Sde_R0026 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Sde_R0028 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Sde_R0019 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Sde_R0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Sde_R0010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Sde_R0007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Sde_R0011 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Sde_R0008 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Sde_R0025 tRNA-Val K14237 tRNA-Val; tRNA Val
D Sde_R0029 tRNA-Val K14237 tRNA-Val; tRNA Val
D Sde_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D Sde_R0043 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Sde_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Sde_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Sde_R0042 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Sde_R0015 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Sde_R0041 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Sde_R0021 ffs; SRP RNA; RNA component of signal recognitionparticle K01983 ffs; SRP RNA
D Sde_R0006 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Sde_R0048 ssrA; ssrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Sde_0949 short-chain dehydrogenase/reductase SDR K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D Sde_1033 glucose-methanol-choline oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D Sde_1897 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D Sde_2854 (2Fe-2S)-binding K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D Sde_2853 conserved hypothetical protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D Sde_1597 Saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D Sde_1999 Electron-transferring-flavoprotein dehydrogenase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D Sde_3744 (Acyl-carrier protein) phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Sde_2811 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D Sde_1862 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Sde_3185 Protein-methionine-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Sde_1165 Protein-methionine-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Sde_3430 glutathione S-transferase-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Sde_3992 conserved hypothetical protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D Sde_1491 cytochrome B561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D Sde_1590 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D Sde_1660 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Sde_1552 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Sde_2810 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D Sde_3743 Pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Sde_2812 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D Sde_0658 Ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Sde_0900 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D Sde_3780 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Sde_1250 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Sde_2466 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Sde_3506 conserved hypothetical protein K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365]
D Sde_1766 N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D Sde_3304 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Sde_0578 GCN5-related N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D Sde_1469 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D Sde_1691 Leucyltransferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Sde_2067 transglutaminase-like protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D Sde_1690 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D Sde_0517 hypothetical protein K19761 GGACT; gamma-glutamylaminecyclotransferase [EC:2.3.2.-]
D Sde_1517 3-oxoacyl-[acyl-carrier-protein] synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D Sde_0507 glycosidase, PH1107-related K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D Sde_0906 cep94B; putative b-glycan phosphorylase K18786 E2.4.1.321; cellobionic acid phosphorylase [EC:2.4.1.321]
D Sde_2921 DTW domain protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D Sde_0676 DTW domain protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D Sde_0349 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Sde_1803 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Sde_3569 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Sde_1563 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Sde_1178 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Sde_0389 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Sde_2514 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Sde_2492 glycoside hydrolase family 2, sugar binding K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D Sde_2890 ces1A; esterase-like protein K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D Sde_1856 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Sde_3505 thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Sde_1718 PHP-like protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Sde_2096 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Sde_0670 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D Sde_3055 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Sde_1654 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Sde_3298 alpha/beta hydrolase fold K01175 ybfF; esterase [EC:3.1.-.-]
D Sde_2834 gly81A; b-glycosidase-like protein K01180 E3.2.1.6; endo-1,3(4)-beta-glucanase [EC:3.2.1.6]
D Sde_2633 xyn10C; putative xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Sde_2934 xyn10B; putative xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Sde_0181 xyn10A; putative xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Sde_0701 xyn11A; putative xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Sde_1175 aga16B; b-agarase K01219 E3.2.1.81; beta-agarase [EC:3.2.1.81]
D Sde_3710 arg53B; endo-1,4-b-galactanase-like protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D Sde_0683 arg53A; putative endo-1,4-b-galactanase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D Sde_2827 arg53C; endo-1,4-b-galactanase-like protein K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D Sde_0786 arb43E; putative arabinanase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Sde_1014 arb43D; putative a-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Sde_2809 arb43A; arabinanase-like protein K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Sde_3317 gly43M; b-D-glycosidase/a-L-glycosidase-like protein K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D Sde_1025 agu67A; putative a-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D Sde_2808 unsaturated uronyl hydrolase-like protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Sde_1282 glycosyl hydrolase, family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Sde_0951 unsaturated uronyl hydrolase-like protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Sde_3946 unsaturated uronyl hydrolase-like protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Sde_2500 xyl31A; putative retaining a-glycosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D Sde_3982 cdx18A; chitinase. Glycosyl Hydrolase family 18 K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D Sde_0483 conserved hypothetical protein K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221]
D Sde_2650 aga86C; b-agarase K27195 E3.2.1.222; funoran endo-beta-hydrolase [EC:3.2.1.222]
D Sde_0435 beta-lactamase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D Sde_0021 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Sde_3061 xyn11B; putative bifunctional xylanase/acetylxylan esterase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Sde_3186 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Sde_1624 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D Sde_0413 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Sde_2069 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Sde_1747 ATPase associated with various cellular activities, AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Sde_3416 protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D Sde_0955 Altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D Sde_2672 protein of unknown function UPF0031 K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Sde_1650 rgl11A; putative rhamnogalacturonan lyase K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D Sde_3284 alg17A; putative alginate lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26]
D Sde_0508 conserved hypothetical protein K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D Sde_0164 ATP-grasp enzyme-like protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D Sde_3361 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Sde_2403 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Sde_2401 serine/threonine protein kinase K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Sde_2400 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Sde_1797 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D Sde_1798 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D Sde_1799 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D Sde_1800 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D Sde_1801 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D Sde_1802 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D Sde_2416 Heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D Sde_3371 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D Sde_1700 CBS domain protein K04767 acuB; acetoin utilization protein AcuB
D Sde_1034 hypothetical protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D Sde_1255 4Fe-4S ferredoxin, iron-sulfur binding K05524 fdxA; ferredoxin
D Sde_2404 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Sde_2405 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Sde_2399 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Sde_1472 Flavodoxin, long chain K03840 fldB; flavodoxin II
D Sde_0083 NapD K02570 napD; periplasmic nitrate reductase NapD
D Sde_0082 periplasmic nitrate reductase NapE K02571 napE; periplasmic nitrate reductase NapE
D Sde_1724 Flavodoxin, long chain K03839 fldA; flavodoxin I
D Sde_0086 periplasmic nitrate reductase subunit NapC K02569 napC; cytochrome c-type protein NapC
D Sde_1998 electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Sde_3197 protein of unknown function DUF540 K06203 cysZ; CysZ protein
D Sde_2496 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Sde_0936 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D Sde_3641 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Sde_2139 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D Sde_2138 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D Sde_0866 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Sde_3664 metal dependent phosphohydrolase K02498 hemY; HemY protein
D Sde_2702 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Sde_2701 protein of unknown function DUF1243 K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D Sde_0217 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
C 99999 Others
D Sde_2313 Phospholipase/lecithinase/hemolysin-like protein K21831 choE; cholinesterase
D Sde_1002 DoxX K15977 K15977; putative oxidoreductase
D Sde_1514 Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Sde_3828 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Sde_1794 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Sde_3760 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Sde_1909 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Sde_3558 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Sde_1685 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
D Sde_3586 regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ K07740 rsd; regulator of sigma D
D Sde_0232 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Sde_0234 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D Sde_3541 RNA binding S1 K06959 tex; protein Tex
C 99974 Translation
D Sde_2114 beta-lactamase-like protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Sde_1686 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Sde_1607 trigger factor K03545 tig; trigger factor
D Sde_3993 multi-sensor signal transduction histidine kinase K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D Sde_0222 dual specificity protein phosphatase K03187 ureE; urease accessory protein
D Sde_0223 Urease accessory protein UreF K03188 ureF; urease accessory protein
D Sde_0224 urease accessory protein UreG K03189 ureG; urease accessory protein
D Sde_0218 Urease accessory protein UreD K03190 ureD; urease accessory protein
D Sde_2741 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Sde_0215 magnesium chelatase, ChlI subunit K07391 comM; magnesium chelatase family protein
D Sde_0185 magnesium chelatase, ChlI subunit K07391 comM; magnesium chelatase family protein
D Sde_2920 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D Sde_3877 20S proteasome, A and B subunits K07395 K07395; putative proteasome-type protease
D Sde_0756 OsmC-like protein K07397 yhfA; putative redox protein
D Sde_2009 HesB/YadR/YfhF K07400 nfuA; Fe/S biogenesis protein NfuA
D Sde_3358 SelT/selW/selH selenoprotein K07401 K07401; selenoprotein W-related protein
D Sde_2711 putative xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Sde_0880 methylated-DNA-(protein)-cysteine S-methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Sde_3678 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Sde_1614 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Sde_0196 ATP-dependent endonuclease of the OLD family K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D Sde_3146 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D Sde_2919 Excinuclease ABC, C subunit-like protein K07461 K07461; putative endonuclease
D Sde_0023 DNA processing protein DprA, putative K04096 smf; DNA processing protein
D Sde_1695 Recombination protein MgsA / PAS/PAC sensor signal transduction histidine kinase K07478 ycaJ; putative ATPase
D Sde_2324 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D Sde_0187 transposase K07497 K07497; putative transposase
D Sde_2777 integrase, catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Sde_1917 transcriptional regulator, MerR family K03972 pspE; phage shock protein E
D Sde_1336 conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Sde_2284 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Sde_1395 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Sde_0907 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Sde_0776 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Sde_1026 sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Sde_0685 major facilitator superfamily MFS_1 K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Sde_3122 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Sde_1090 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Sde_2740 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Sde_1664 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Sde_2861 Bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D Sde_0574 Hemerythrin HHE cation binding region K07322 ytfE; regulator of cell morphogenesis and NO signaling
D Sde_2762 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D Sde_0731 SpoVR K06415 spoVR; stage V sporulation protein R
D Sde_0493 peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D Sde_0877 signaling modulator of AmpD, AmpE K03807 ampE; AmpE protein
D Sde_1780 UspA K06149 uspA; universal stress protein A
D Sde_1066 hypothetical protein K14055 uspE; universal stress protein E
D Sde_0511 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Sde_2472 Anti-sigma factor ChrR, putative K07167 chrR; putative transcriptional regulator
D Sde_3929 HPP domain containing protein K07168 K07168; CBS domain-containing membrane protein
D Sde_3301 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Sde_0733 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D Sde_1715 SH3-like region K07184 ygiM; SH3 domain protein
D Sde_0533 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D Sde_1694 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D Sde_3254 transcriptional regulator, GntR family K02494 lolB; outer membrane lipoprotein LolB
D Sde_1110 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Sde_0561 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D Sde_2588 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Sde_1252 peptidase M23B K06194 nlpD; lipoprotein NlpD
D Sde_0668 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein
D Sde_1428 AsmA K07289 asmA; AsmA protein
D Sde_0328 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D Sde_2283 methyl-accepting chemotaxis sensory transducer K02005 ABC.CD.TX; HlyD family secretion protein
D Sde_2782 secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D Sde_0309 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D Sde_3234 secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D Sde_2517 protein of unknown function UPF0118 K11744 tqsA; AI-2 transport protein TqsA
D Sde_0634 Inner membrane CreD K06143 creD; inner membrane protein
D Sde_1870 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Sde_1877 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D Sde_1878 Tetratricopeptide TPR_2 K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D Sde_1433 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D Sde_3751 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Sde_2431 BFD-like (2Fe-2S)-binding region K02192 bfd; bacterioferritin-associated ferredoxin
D Sde_0736 ApaG K06195 apaG; ApaG protein
D Sde_0345 imelysin. Metallo peptidase. MEROPS family M75 K07231 K07231; putative iron-regulated protein
D Sde_1946 copper resistance B precursor K07233 pcoB; copper resistance protein B
D Sde_0102 NnrS K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Sde_2073 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Sde_0400 peptidoglycan hydrolase-like protein K03796 bax; Bax protein
D Sde_3912 peptidoglycan hydrolase-like protein K03796 bax; Bax protein
D Sde_3509 Mammalian cell entry related K06192 pqiB; paraquat-inducible protein B
D Sde_0258 histidine kinase K04065 osmY; hyperosmotically inducible periplasmic protein
D Sde_1242 globin K06886 glbN; hemoglobin
D Sde_1541 globin K06886 glbN; hemoglobin
D Sde_1888 Patatin K07001 K07001; NTE family protein
D Sde_0836 HesB/YadR/YfhF K15724 erpA; iron-sulfur cluster insertion protein
D Sde_1414 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Sde_1416 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Sde_0901 tRNA-processing RNAse BN K07058 K07058; membrane protein
D Sde_0882 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D Sde_1420 Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D Sde_1312 Rhodanese-like protein K07146 K07146; UPF0176 protein
D Sde_1676 protein of unknown function DUF489 K07153 hflD; high frequency lysogenization protein
D Sde_0694 conserved hypothetical protein K04750 phnB; PhnB protein
D Sde_3321 histidine kinase K04750 phnB; PhnB protein
D Sde_3778 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH
D Sde_3150 LemA K03744 lemA; LemA protein
D Sde_1341 SlyX K03745 slyX; SlyX protein
D Sde_2075 Sporulation related K03749 dedD; DedD protein
D Sde_2684 Sporulation related K03112 damX; DamX protein
D Sde_3510 conserved hypothetical protein K03808 pqiA; paraquat-inducible protein A
D Sde_1251 protein of unknown function DUF368 K08974 K08974; putative membrane protein
D Sde_3047 serine/threonine protein kinase K08981 K08981; putative membrane protein
D Sde_3410 conserved hypothetical protein K08983 K08983; putative membrane protein
D Sde_0648 protein of unknown function DUF1304 K08987 K08987; putative membrane protein
D Sde_1547 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D Sde_0107 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D Sde_1640 Ankyrin K06867 K06867; uncharacterized protein
D Sde_1044 GPW/gp25 K06903 W; Bacteriophage baseplate protein W
D Sde_1038 conserved hypothetical protein K06907 FI; Bacteriophage tail sheath protein
D Sde_1894 protein of unknown function DUF1289 K06938 K06938; uncharacterized protein
D Sde_2468 amine oxidase K06954 K06954; uncharacterized protein
D Sde_3871 Zn-dependent protease K06973 K06973; uncharacterized protein
D Sde_2033 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Sde_0100 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D Sde_3658 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D Sde_0373 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein
D Sde_1321 conserved hypothetical protein K07003 K07003; uncharacterized protein
D Sde_0562 putative integral membrane protein K07003 K07003; uncharacterized protein
D Sde_3357 Patched K07003 K07003; uncharacterized protein
D Sde_1317 Patched K07003 K07003; uncharacterized protein
D Sde_2843 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein
D Sde_1841 pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07006 K07006; uncharacterized protein
D Sde_3434 pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07006 K07006; uncharacterized protein
D Sde_1295 hydrolase of the alpha/beta-hydrolase fold K07019 K07019; uncharacterized protein
D Sde_1152 conserved hypothetical protein K07020 K07020; uncharacterized protein
D Sde_0032 conserved hypothetical protein K07070 K07070; uncharacterized protein
D Sde_3932 permease K07089 K07089; uncharacterized protein
D Sde_2628 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Sde_0128 hypothetical protein K07090 K07090; uncharacterized protein
D Sde_3426 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Sde_2294 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Sde_2917 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Sde_1666 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Sde_1993 permease K07090 K07090; uncharacterized protein
D Sde_1450 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Sde_0385 putative cell surface protein K07093 K07093; uncharacterized protein
D Sde_3145 LppC putative lipoprotein K07121 K07121; uncharacterized protein
D Sde_2903 Sel1 K07126 K07126; uncharacterized protein
D Sde_2364 MOSC-like beta barrel K07140 K07140; MOSC domain-containing protein
D Sde_0310 methyl-accepting chemotaxis sensory transducer K07148 K07148; uncharacterized protein
D Sde_4015 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Sde_0837 hypothetical protein K09004 K09004; uncharacterized protein
D Sde_0718 GatB/Yqey K09117 K09117; uncharacterized protein
D Sde_3336 protein of unknown function DUF493 K09158 K09158; uncharacterized protein
D Sde_1340 Uncharacterised conserved protein UCP006173 K09160 K09160; uncharacterized protein
D Sde_3048 membrane-flanked domain K09167 K09167; uncharacterized protein
D Sde_2467 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein
D Sde_3715 conserved hypothetical protein K09702 K09702; uncharacterized protein
D Sde_3033 protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D Sde_1716 YCII-related K09780 K09780; uncharacterized protein
D Sde_2902 protein of unknown function DUF808 K09781 K09781; uncharacterized protein
D Sde_0732 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D Sde_1297 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Sde_2414 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Sde_0491 protein of unknown function DUF610, YibQ K09798 K09798; uncharacterized protein
D Sde_2738 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein
D Sde_3089 protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D Sde_0029 hypothetical protein K09807 K09807; uncharacterized protein
D Sde_1804 protein of unknown function DUF539 K05952 K05952; uncharacterized protein
D Sde_1518 RNA binding S1 K00243 K00243; uncharacterized protein
D Sde_3508 protein of unknown function DUF330 K09857 K09857; uncharacterized protein
D Sde_3824 protein of unknown function DUF328 K09861 K09861; uncharacterized protein
D Sde_0859 protein of unknown function DUF329 K09862 K09862; uncharacterized protein
D Sde_3514 protein of unknown function UPF0149 K09895 K09895; uncharacterized protein
D Sde_1151 protein of unknown function UPF0270 K09898 K09898; uncharacterized protein
D Sde_1339 protein of unknown function DUF709 K09902 K09902; uncharacterized protein
D Sde_3166 protein of unknown function DUF1043 K09908 K09908; uncharacterized protein
D Sde_1513 Uncharacterised conserved protein UCP006287 K09910 K09910; uncharacterized protein
D Sde_0646 conserved hypothetical protein K09912 K09912; uncharacterized protein
D Sde_2426 protein of unknown function DUF480 K09915 K09915; uncharacterized protein
D Sde_1736 protein of unknown function DUF1315 K09916 K09916; uncharacterized protein
D Sde_0674 YebG K09918 K09918; uncharacterized protein
D Sde_3841 protein of unknown function DUF482 K09919 K09919; uncharacterized protein
D Sde_0371 histidine kinase K09920 K09920; uncharacterized protein
D Sde_0236 protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D Sde_2417 conserved hypothetical protein K09926 K09926; uncharacterized protein
D Sde_1701 conserved hypothetical protein K09928 K09928; uncharacterized protein
D Sde_1004 protein of unknown function DUF692 K09930 K09930; uncharacterized protein
D Sde_2219 conserved hypothetical protein K09931 K09931; uncharacterized protein
D Sde_2663 conserved hypothetical protein K09937 K09937; uncharacterized protein
D Sde_0895 conserved hypothetical protein K09938 K09938; uncharacterized protein
D Sde_3029 PepSY-associated TM helix K09939 K09939; uncharacterized protein
D Sde_0007 conserved hypothetical membrane protein K09940 K09940; uncharacterized protein
D Sde_1556 protein of unknown function DUF1415 K09941 K09941; uncharacterized protein
D Sde_1046 conserved hypothetical protein K09946 K09946; uncharacterized protein
D Sde_2363 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D Sde_1973 conserved hypothetical protein K09950 K09950; uncharacterized protein
D Sde_2899 conserved hypothetical protein K09954 K09954; uncharacterized protein
D Sde_0778 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D Sde_3432 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
D Sde_2823 protein of unknown function DUF1348 K09958 K09958; uncharacterized protein
D Sde_1125 conserved hypothetical protein K09967 K09967; uncharacterized protein
D Sde_1126 conserved hypothetical protein K09967 K09967; uncharacterized protein
D Sde_0615 GumN K09973 K09973; uncharacterized protein
D Sde_1765 conserved hypothetical protein K09974 K09974; uncharacterized protein
D Sde_1732 conserved hypothetical protein K09977 K09977; uncharacterized protein
D Sde_3480 conserved hypothetical protein K09980 K09980; uncharacterized protein
D Sde_0579 conserved hypothetical protein K09983 K09983; uncharacterized protein
D Sde_1220 putative secreted protein K09992 K09992; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 19, 2024