+E
#
Transcription Machinery - Saccharophagus degradans
%
!
AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E Sde_0984 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E Sde_0924 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E Sde_0925 DNA-directed RNA polymerase, subunit beta-prime K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E Sde_3696 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E Sde_0716 RNA polymerase sigma factor RpoD-like protein K03086 rpoD; RNA polymerase primary sigma factor
E Sde_1253 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E Sde_0297 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Sde_2251 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Sde_2407 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Sde_0799 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Sde_3895 sigma-70 region 2 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E Sde_3594 CheW protein K03089 rpoH; RNA polymerase sigma-32 factor
E Sde_3179 sigma-54, DNA-binding K03092 rpoN; RNA polymerase sigma-54 factor
E Sde_2164 RNA polymerase sigma factor, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E Sde_1680 helicase-like protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
E Sde_2709 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E Sde_3454 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
E Sde_0919 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
E Sde_3160 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A
E Sde_3159 Stringent starvation protein B K03600 sspB; stringent starvation protein B
E Sde_2250 Anti sigma-E protein RseA-like protein K03597 rseA; sigma-E factor negative regulatory protein RseA
E Sde_2249 Negative regulator of sigma E activity-like protein K03598 rseB; sigma-E factor negative regulatory protein RseB
E Sde_2248 Positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E Sde_3372 RNA polymerase-binding, DksA K06204 dksA; RNA polymerase-binding transcription factor
E Sde_2727 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
E Sde_1235 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB
D Transcription termination factor
E Sde_3656 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024