+D GENES KO
#
KEGG Orthology (KO) - Streptococcus dentalis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sden00010]
D SM121_06585 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SM121_02900 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM121_00240 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM121_05225 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SM121_03225 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM121_03235 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SM121_08800 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM121_05340 eno; (GenBank) surface-displayed alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM121_08040 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM121_06765 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SM121_06770 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SM121_06775 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_07155 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_08680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_01830 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM121_09615 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM121_01860 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SM121_07070 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM121_00765 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM121_03565 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:sden00020]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_06765 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SM121_06770 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SM121_06775 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:sden00030]
D SM121_02900 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM121_05075 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SM121_05350 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SM121_04140 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SM121_03180 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SM121_07370 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SM121_03785 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D SM121_06195 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SM121_07365 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SM121_07070 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM121_02010 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SM121_07110 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SM121_00240 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:sden00040]
D SM121_02950 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM121_03180 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SM121_02710 zinc-binding dehydrogenase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D SM121_02705 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:sden00051]
D SM121_03875 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SM121_03900 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM121_06525 pfkB; (GenBank) 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SM121_00240 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM121_05225 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SM121_06530 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SM121_01870 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SM121_09620 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM121_01880 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_09625 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_01875 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_09630 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_00970
C 00052 Galactose metabolism [PATH:sden00052]
D SM121_01860 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SM121_05775 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SM121_05785 galT; (GenBank) UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SM121_05790 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM121_07900 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM121_02950 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM121_07070 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM121_06585 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SM121_01890 beta-galactosidase family protein K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D SM121_02725 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SM121_06020 tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM121_06025 lacD; (GenBank) tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SM121_06010 lacA; (GenBank) galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SM121_06015 lacB; (GenBank) galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SM121_06045 lacG; (GenBank) 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SM121_06035 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SM121_06040 lactose-specific PTS transporter subunit EIIC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SM121_03865 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM121_08855 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM121_00450 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D SM121_00980 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SM121_01865 SIS domain-containing protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:sden00500]
D SM121_03870 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM121_03865 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM121_08855 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM121_02950 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM121_08660 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D SM121_00765 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM121_03565 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM121_08270 glgD; (GenBank) glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SM121_08275 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SM121_08265 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D SM121_08280 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SM121_02515 glgP; (GenBank) glycogen/starch/alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SM121_02480 pulA; (GenBank) type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D SM121_07715 pulA; (GenBank) type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D SM121_05865 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SM121_07495 glycoside hydrolase family 13 protein K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D SM121_00450 alpha-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D SM121_02510 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SM121_04150 PTS transporter subunit IIBC K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SM121_04155 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D SM121_07070 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM121_06585 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SM121_02900 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM121_03875 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:sden00620]
D SM121_06765 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SM121_06770 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SM121_06775 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_03420 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SM121_01830 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM121_09615 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM121_01060 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SM121_07085 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM121_08040 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM121_09645 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SM121_09665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SM121_09655 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SM121_09650 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SM121_04225 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SM121_03555 spxB; (GenBank) pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D SM121_07155 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_08680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_07920 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SM121_05285 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SM121_05215 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SM121_07265 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sden00630]
D SM121_02330 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SM121_02875 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SM121_03250 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM121_06905 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_05330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:sden00640]
D SM121_01060 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SM121_07085 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_03420 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SM121_09645 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SM121_09665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SM121_09655 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SM121_09650 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SM121_07155 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_08680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_00810 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:sden00650]
D SM121_01830 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM121_03420 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SM121_03400 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SM121_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM121_00130 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM121_05365 budA; (GenBank) acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SM121_04010 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D SM121_07430 (S)-acetoin forming diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:sden00660]
D SM121_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM121_00130 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM121_05365 budA; (GenBank) acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SM121_07250 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SM121_07245 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SM121_07260 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:sden00562]
D SM121_07985 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SM121_05225 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sden00190]
D SM121_08235 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SM121_08225 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SM121_08230 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SM121_08240 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SM121_08220 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SM121_08250 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SM121_08245 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SM121_08255 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SM121_01720 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D SM121_01715 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D SM121_01735 V-type ATPase subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D SM121_01710 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D SM121_01740 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D SM121_01730 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D SM121_01755 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D SM121_01750 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D SM121_01745 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D SM121_04385 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:sden00710]
D SM121_03235 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SM121_03225 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM121_00240 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM121_07370 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SM121_05225 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SM121_03180 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SM121_05215 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:sden00720]
D SM121_05215 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SM121_09645 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SM121_09665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SM121_09655 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SM121_09650 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SM121_03760 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SM121_07050 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SM121_08870 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SM121_03765 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D SM121_03730 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SM121_07085 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM121_01060 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:sden00680]
D SM121_06905 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM121_05340 eno; (GenBank) surface-displayed alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM121_05215 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SM121_00240 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM121_01060 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SM121_07085 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM121_08800 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM121_05325 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:sden00910]
D SM121_03485 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SM121_03250 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM121_08380 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SM121_03005 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sden00920]
D SM121_07415 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SM121_00480 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SM121_09305 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SM121_05565 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SM121_04410 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sden00061]
D SM121_09645 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SM121_09665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SM121_09655 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SM121_09650 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SM121_01975 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SM121_09690 acyl carrier protein K02078 acpP; acyl carrier protein
D SM121_09680 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SM121_06825 3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM121_09695 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM121_09670 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM121_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM121_09675 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM121_09660 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM121_09685 fabK; (GenBank) enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SM121_09705 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D SM121_01830 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM121_09615 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:sden00074]
D SM121_03925 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SM121_01975 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SM121_09690 acyl carrier protein K02078 acpP; acyl carrier protein
D SM121_09680 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sden00561]
D SM121_05330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM121_00810 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SM121_07445 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SM121_01980 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SM121_07205 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SM121_08435 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SM121_07720 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SM121_05010 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SM121_05005 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SM121_07710 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:sden00564]
D SM121_02955 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SM121_07440 glpO; (GenBank) type 1 glycerol-3-phosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D SM121_07205 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SM121_08435 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SM121_07720 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SM121_00675 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SM121_02305 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SM121_02630 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SM121_06665 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:sden00600]
D SM121_07220 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D SM121_00295 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_01225 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sden00230]
D SM121_08565 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SM121_07365 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SM121_07070 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM121_02010 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SM121_07110 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SM121_01960 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SM121_01930 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SM121_01950 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SM121_01965 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SM121_01955 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SM121_01920 purK; (GenBank) 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SM121_01925 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SM121_01970 purC; (GenBank) phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SM121_01900 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SM121_01940 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SM121_05560 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SM121_07355 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM121_07340 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM121_02155 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SM121_02275 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SM121_04260 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SM121_06955 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SM121_06855 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM121_07345 type 1 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM121_06960 guaC; (GenBank) GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SM121_09370 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SM121_08300 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM121_08305 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM121_02640 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SM121_00855 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SM121_07100 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SM121_02870 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SM121_05575 add; (GenBank) adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SM121_01390 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SM121_08380 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:sden00240]
D SM121_06445 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SM121_06440 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SM121_06435 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SM121_07280 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SM121_07310 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D SM121_07315 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D SM121_03490 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D SM121_07300 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SM121_07305 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SM121_04565 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SM121_00255 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SM121_07810 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SM121_05625 udk; (GenBank) uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SM121_06490 YjjG family noncanonical pyrimidine nucleotidase K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D SM121_04425 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SM121_06430 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SM121_06190 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SM121_06200 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SM121_02640 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SM121_08300 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM121_08305 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM121_07790 deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SM121_04475 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SM121_02990 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SM121_06930 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SM121_06590 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SM121_04090 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sden00250]
D SM121_03940 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SM121_09050 asnA; (GenBank) aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SM121_06285 pyridoxal phosphate-dependent aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D SM121_03955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SM121_04590 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SM121_02870 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SM121_01900 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SM121_06435 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SM121_03485 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SM121_03250 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM121_06445 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SM121_06440 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SM121_00760 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SM121_01960 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sden00260]
D SM121_09710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM121_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM121_05905 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SM121_05910 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SM121_01585 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SM121_06905 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM121_05330 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM121_08800 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM121_05325 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SM121_04090 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_02335 sdaAA; (GenBank) L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SM121_02340 sdaAB; (GenBank) L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SM121_00120 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SM121_01530 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SM121_01535 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SM121_08985 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:sden00270]
D SM121_00480 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SM121_09305 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SM121_04415 MalY/PatB family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM121_03725 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SM121_07775 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SM121_08555 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SM121_05635 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SM121_09145 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SM121_09380 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SM121_09710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM121_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM121_05905 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SM121_05910 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SM121_05565 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SM121_04410 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SM121_07185 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM121_05835 gshAB; (GenBank) bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SM121_07155 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_08680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_02335 sdaAA; (GenBank) L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SM121_02340 sdaAB; (GenBank) L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:sden00280]
D SM121_07185 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_03400 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sden00290]
D SM121_00120 ilvA; (GenBank) threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SM121_07250 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SM121_07245 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SM121_07260 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SM121_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM121_00130 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM121_00125 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SM121_01605 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SM121_06940 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SM121_07185 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM121_03955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SM121_07265 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:sden00300]
D SM121_05905 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SM121_09710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM121_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM121_06690 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM121_06565 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SM121_02925 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SM121_04040 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SM121_04245 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SM121_01990 pyridoxal phosphate-dependent aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SM121_02930 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SM121_08500 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:sden00220]
D SM121_08385 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SM121_08390 arcA; (GenBank) arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SM121_03250 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM121_06445 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SM121_06440 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SM121_08380 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SM121_03485 gdhA; (GenBank) NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SM121_03955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:sden00330]
D SM121_06865 aguA; (GenBank) agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D SM121_06925 GNAT family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D SM121_06080 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SM121_06070 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
C 00340 Histidine metabolism [PATH:sden00340]
D SM121_03745 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SM121_03775 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D SM121_03780 hutI; (GenBank) imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D SM121_03740 hutG; (GenBank) formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D SM121_03770 ftcD; (GenBank) glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism
D SM121_01830 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM121_09615 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sden00400]
D SM121_03920 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM121_07690 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SM121_07700 aroD; (GenBank) type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SM121_07665 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SM121_07670 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SM121_07685 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SM121_01560 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SM121_01550 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SM121_01540 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SM121_01545 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SM121_01530 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SM121_01535 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SM121_08985 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SM121_07405 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D SM121_07680 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SM121_07660 pheA; (GenBank) prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:sden00430]
D SM121_04590 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SM121_07085 pta; (GenBank) phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM121_01060 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:sden00450]
D SM121_04410 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SM121_04415 MalY/PatB family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM121_03725 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SM121_00065 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SM121_09440 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SM121_08795 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sden00460]
D SM121_03940 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SM121_09050 asnA; (GenBank) aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SM121_06905 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:sden00470]
D SM121_03930 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SM121_08505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM121_02445 dltA; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SM121_02455 dltC; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SM121_04255 racE; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SM121_08945 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SM121_04245 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:sden00480]
D SM121_05835 gshAB; (GenBank) bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SM121_07945 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SM121_05170 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SM121_04140 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SM121_05075 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SM121_05470 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sden00520]
D SM121_01800 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SM121_08570 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SM121_01130 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM121_02695 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM121_07770 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM121_08210 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM121_05920 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SM121_00295 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_01225 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_09520 nagA; (GenBank) N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SM121_08140 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SM121_00980 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SM121_08355 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SM121_00760 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SM121_03875 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SM121_02900 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM121_03900 manA; (GenBank) mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SM121_06585 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SM121_07070 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM121_02950 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM121_05775 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SM121_05785 galT; (GenBank) UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SM121_05790 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM121_07900 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM121_02725 glf; (GenBank) UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SM121_01870 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SM121_09620 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM121_01880 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_09625 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_01875 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_09630 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_08270 glgD; (GenBank) glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SM121_08275 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SM121_05605 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:sden00541]
D SM121_08570 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SM121_01770 dihydrodipicolinate synthase family protein K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D SM121_01130 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM121_02695 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM121_02950 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM121_05605 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM121_05615 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SM121_05610 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SM121_07865 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:sden00511]
D SM121_00295 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_01225 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_01235 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D SM121_01525 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:sden00542]
D SM121_00080 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:sden00550]
D SM121_07770 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM121_08210 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM121_05920 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SM121_04195 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SM121_08945 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SM121_08505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM121_08500 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SM121_04910 diacylglycerol kinase family protein K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SM121_00680 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SM121_00090 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM121_09465 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SM121_08940 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SM121_09415 pbp1a; (GenBank) penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM121_02750 pbp2a; (GenBank) penicillin-binding protein PBP2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SM121_05210 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_05300 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_00050 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM121_00325 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06165 ldcB; (GenBank) LD-carboxypeptidase LdcB/DacB K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_04400 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SM121_08155 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SM121_08160 type 1 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SM121_05235 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SM121_05230 aminoacyltransferase K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SM121_01145 pbp1b; (GenBank) penicillin-binding protein PBP1B K03693 pbp1b; penicillin-binding protein 1B
D SM121_08515 pbp2b; (GenBank) penicillin-binding protein PBP2B K00687 pbp2B; penicillin-binding protein 2B
D SM121_09470 pbp2X; (GenBank) penicillin-binding protein PBP2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:sden00552]
D SM121_00090 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM121_00080 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM121_02685 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D SM121_02445 dltA; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SM121_02455 dltC; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SM121_02450 dltB; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SM121_02460 dltD; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D SM121_07655 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SM121_09590 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SM121_07710 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SM121_05010 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SM121_02680 LicD family protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D SM121_00080 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:sden00543]
D SM121_00080 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM121_00480 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sden00730]
D SM121_05960 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_07115 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_05965 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SM121_03175 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SM121_03185 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SM121_01390 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sden00740]
D SM121_09610 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SM121_08000 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SM121_08565 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:sden00750]
D SM121_00285 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SM121_01585 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sden00760]
D SM121_09435 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SM121_07355 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM121_07340 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM121_02840 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SM121_09115 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SM121_09430 nadE; (GenBank) ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SM121_07330 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SM121_07095 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:sden00770]
D SM121_00135 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM121_00130 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM121_00125 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SM121_01605 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SM121_06940 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SM121_06180 coaA; (GenBank) type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SM121_07055 phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D SM121_07060 coaC; (GenBank) phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D SM121_09040 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SM121_04925 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SM121_03925 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SM121_07185 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:sden00780]
D SM121_09670 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM121_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM121_09675 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM121_09660 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM121_05765 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:sden00785]
D SM121_06785 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_06765 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SM121_06770 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SM121_06775 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:sden00790]
D SM121_01040 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SM121_01035 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D SM121_01050 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SM121_06600 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SM121_01045 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SM121_02620 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SM121_03600 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00670 One carbon pool by folate [PATH:sden00670]
D SM121_06600 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SM121_03760 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SM121_07050 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SM121_08870 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SM121_03765 cyclodeaminase/cyclohydrolase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D SM121_06905 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM121_01950 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SM121_01940 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SM121_03770 ftcD; (GenBank) glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D SM121_06590 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SM121_03730 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SM121_02935 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D SM121_07775 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sden00130]
D SM121_01185 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SM121_06365 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SM121_00785 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sden00900]
D SM121_03400 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SM121_03395 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D SM121_03365 mvk; (GenBank) mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SM121_03375 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D SM121_03370 mvaD; (GenBank) diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D SM121_03380 fni; (GenBank) type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SM121_08840 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SM121_00680 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:sden00523]
D SM121_05605 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM121_05615 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SM121_05610 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SM121_07865 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D SM121_05615 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SM121_06800 acetylxylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis
D SM121_06070 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
C 00261 Monobactam biosynthesis [PATH:sden00261]
D SM121_09710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM121_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM121_06690 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM121_06565 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sden00521]
D SM121_06585 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SM121_07070 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM121_07985 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SM121_05605 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM121_05615 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SM121_05610 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SM121_07865 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SM121_06585 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:sden00525]
D SM121_05605 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM121_05615 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D SM121_07680 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SM121_01560 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SM121_09680 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SM121_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM121_09675 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SM121_01975 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D SM121_09690 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D SM121_07775 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D SM121_06935 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation
D SM121_04225 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:sden00625]
D SM121_09615 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM121_01830 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D SM121_06935 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D SM121_06935 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:sden00626]
D SM121_09615 adhP; (GenBank) alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM121_01830 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sden03020]
D SM121_01140 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SM121_01135 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SM121_01365 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SM121_09365 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SM121_00265 rpoE; (GenBank) DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sden03010]
D SM121_00020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_01350 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_02135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_09280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_01340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_02125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_09270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_01335 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_02120 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_09265 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_07165 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SM121_02780 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SM121_01465 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SM121_02400 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SM121_01410 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SM121_03805 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SM121_03215 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SM121_01425 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SM121_00405 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SM121_01500 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SM121_01370 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SM121_03210 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SM121_01375 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SM121_01430 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SM121_00525 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SM121_06495 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SM121_01450 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SM121_03815 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SM121_01475 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SM121_06175 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SM121_08095 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SM121_04560 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SM121_01480 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SM121_01495 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SM121_01490 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SM121_01435 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SM121_01420 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SM121_02370 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SM121_06625 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SM121_04555 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SM121_06630 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SM121_00410 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SM121_01445 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SM121_01400 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SM121_01460 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SM121_01360 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SM121_01415 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SM121_07395 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SM121_07795 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SM121_05975 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SM121_01470 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SM121_01485 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SM121_01440 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SM121_05985 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SM121_00185 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SM121_01455 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SM121_01405 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SM121_07425 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SM121_01620 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SM121_01625 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM121_02760 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM121_04935 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM121_03135 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SM121_07800 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SM121_01380 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sden00970]
D SM121_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_01345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_02130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_09275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_02075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_02080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_02235 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_07160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_07390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_09220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_09225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_02255 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM121_09715 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM121_02110 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM121_09255 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM121_02775 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SM121_01280 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM121_07170 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM121_01315 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SM121_02145 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SM121_02250 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SM121_01325 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_02040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_02090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_09235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_01285 tRNA-His K14226 tRNA-His; tRNA His
D SM121_01320 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM121_02035 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM121_00250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_01275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_02085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_02100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_03170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_09230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_09245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_00895 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM121_02105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM121_09250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM121_01305 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM121_02050 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM121_02060 tRNA-Ile K14230 tRNA-Met; tRNA Met
D SM121_02065 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM121_01300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM121_02045 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM121_02070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM121_09215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM121_01310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_02030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_02055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_03165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_08055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_00205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_02095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_04600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_09240 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_01290 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SM121_01295 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM121_07175 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM121_01330 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM121_02115 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM121_09260 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM121_03040 gltX; (GenBank) glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SM121_03995 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SM121_04000 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SM121_03990 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SM121_08310 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SM121_02470 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM121_06290 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SM121_09505 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SM121_09500 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SM121_05015 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SM121_09640 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SM121_00470 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SM121_08795 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SM121_09355 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SM121_09165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SM121_00795 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM121_08895 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SM121_05190 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SM121_02545 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM121_00665 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SM121_01590 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SM121_05385 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SM121_05395 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SM121_01150 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM121_02270 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D SM121_05050 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sden03060]
D SM121_01395 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SM121_03060 secY2; (GenBank) accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D SM121_02765 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SM121_04940 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SM121_00685 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SM121_03120 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_04220 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_03080 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_03915 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_06810 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM121_02895 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D SM121_05070 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM121_06970 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D SM121_06975 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D SM121_03435 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SM121_08035 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SM121_06060 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sden04122]
D SM121_05960 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_07115 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_02350 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SM121_05965 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sden03018]
D SM121_05340 eno; (GenBank) surface-displayed alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM121_00485 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SM121_04945 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SM121_08460 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SM121_09375 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SM121_03030 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SM121_03255 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM121_00310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SM121_00950 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sden03030]
D SM121_03335 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM121_08050 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM121_00585 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SM121_05640 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM121_04480 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM121_08415 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM121_02210 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM121_02375 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM121_08085 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SM121_01005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_03810 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_04715 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_06725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SM121_03440 rnhC; (GenBank) ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SM121_01520 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM121_07725 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sden03410]
D SM121_08545 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SM121_07290 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SM121_07080 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SM121_04920 mutM; (GenBank) DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SM121_02580 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SM121_08530 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D SM121_01520 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM121_05550 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM121_07725 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sden03420]
D SM121_02185 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SM121_03835 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SM121_06355 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SM121_06120 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SM121_08025 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SM121_01520 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM121_07725 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sden03430]
D SM121_02555 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SM121_03455 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SM121_02570 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SM121_08025 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SM121_08850 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SM121_08845 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SM121_05550 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM121_01005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_03810 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_04715 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_08050 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM121_00585 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SM121_02210 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM121_05640 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM121_08415 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM121_04480 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM121_03335 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM121_07725 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SM121_09150 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:sden03440]
D SM121_05550 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM121_01005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_03810 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_04715 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_02280 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SM121_01985 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SM121_08510 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D SM121_02590 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D SM121_01520 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM121_02575 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SM121_01855 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SM121_03935 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SM121_03430 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SM121_08050 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM121_00585 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SM121_02210 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM121_05640 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM121_08415 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM121_04480 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM121_03335 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM121_09360 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:sden03250]
D SM121_04515 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sden02010]
D SM121_05940 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SM121_05935 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D SM121_05930 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D SM121_05925 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SM121_00775 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SM121_00780 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SM121_00455 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SM121_02505 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SM121_02500 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SM121_02495 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SM121_01210 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SM121_01220 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D SM121_01215 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SM121_06205 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D SM121_06220 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SM121_06210 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SM121_01000 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SM121_07975 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D SM121_07970 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SM121_07965 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D SM121_07960 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SM121_06320 amino acid ABC transporter substrate-binding protein/permease K10036 glnH; glutamine transport system substrate-binding protein
D SM121_06315 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SM121_04030 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SM121_09455 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D SM121_09450 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SM121_00740 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein
D SM121_00735 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D SM121_00730 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D SM121_00725 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SM121_00100 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D SM121_00105 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SM121_04440 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM121_04445 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SM121_04450 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SM121_04455 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM121_04460 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM121_04035 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SM121_04050 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SM121_04045 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SM121_00045 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_05850 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08630 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00040 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SM121_00035 oppC; (GenBank) oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D SM121_00030 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SM121_00025 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM121_01255 zinc ABC transporter substrate-binding protein AdcA K09815 znuA; zinc transport system substrate-binding protein
D SM121_08755 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D SM121_01260 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D SM121_01265 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SM121_00830 fimA; (GenBank) metal ABC transporter substrate-binding lipoprotein/fibrin-binding adhesin FimA K19971 psaA; manganese/zinc transport system substrate-binding protein
D SM121_00825 metal ABC transporter permease K19972 psaC; manganese/zinc transport system permease protein
D SM121_00820 metal ABC transporter ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D SM121_07940 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D SM121_02320 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D SM121_03615 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D SM121_02310 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_03620 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_02315 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_03625 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_01165 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D SM121_01170 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D SM121_05680 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D SM121_05675 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D SM121_08720 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D SM121_08640 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SM121_08725 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SM121_05280 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SM121_05275 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SM121_06240 ABC transporter transmembrane domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06245 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_04605 tetA(46); (GenBank) tetracycline efflux ABC transporter Tet(46) subunit A K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SM121_04610 tetB(46); (GenBank) tetracycline efflux ABC transporter Tet(46) subunit B K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SM121_05460 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06305 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06650 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_05465 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06310 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06655 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_07635 msr(D); (GenBank) ABC-F type ribosomal protection protein Msr(D) K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:sden02060]
D SM121_08285 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SM121_08290 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SM121_04150 PTS transporter subunit IIBC K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SM121_03870 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM121_06035 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SM121_06040 lactose-specific PTS transporter subunit EIIC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SM121_08660 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D SM121_01870 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SM121_09620 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM121_01880 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_09625 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_01875 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_09630 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_00980 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SM121_05995 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SM121_06000 PTS sugar transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SM121_06005 PTS transporter subunit IIC K20114 gatC; galactose PTS system EIIC component
D SM121_06530 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SM121_06525 pfkB; (GenBank) 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SM121_00970
C 03070 Bacterial secretion system [PATH:sden03070]
D SM121_02765 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SM121_04940 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SM121_01395 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SM121_03060 secY2; (GenBank) accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D SM121_00685 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SM121_03120 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_04220 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_03080 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_03915 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_05070 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM121_06810 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM121_06970 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D SM121_06975 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sden02020]
D SM121_07975 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D SM121_02225 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM121_05030 vicK; (GenBank) cell wall metabolism sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SM121_05025 yycF; (GenBank) response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D SM121_02215 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SM121_08720 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D SM121_08640 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SM121_08725 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SM121_08735 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SM121_08740 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SM121_02445 dltA; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SM121_02450 dltB; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SM121_02455 dltC; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SM121_02460 dltD; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D SM121_07925 HAMP domain-containing sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SM121_07930 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SM121_00325 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06165 ldcB; (GenBank) LD-carboxypeptidase LdcB/DacB K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06330 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SM121_06335 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D SM121_00940 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SM121_00945 response regulator transcription factor K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SM121_02240 GHKL domain-containing protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SM121_02245 LytTR family DNA-binding domain-containing protein K12295 comE; two-component system, LytTR family, response regulator ComE
D SM121_02140 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
D SM121_02165 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SM121_00145 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SM121_00140 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D SM121_09325 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SM121_09320 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D SM121_03250 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM121_01200 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SM121_09005 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SM121_01195 response regulator transcription factor K07720 yesN; two-component system, response regulator YesN
D SM121_09010 response regulator transcription factor K07720 yesN; two-component system, response regulator YesN
D SM121_01845 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SM121_01130 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM121_02695 wecB; (GenBank) UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome [PATH:sden04142]
D SM121_01525 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D SM121_00295 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_01225 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 04146 Peroxisome [PATH:sden04146]
D SM121_03365 mvk; (GenBank) mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SM121_08410 sodA; (GenBank) superoxide dismutase SodA K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sden02024]
D SM121_09380 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SM121_01560 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SM121_03920 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM121_06870 APC family permease K20265 gadC; glutamate:GABA antiporter
D SM121_04440 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM121_04445 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SM121_04450 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SM121_04455 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM121_04460 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM121_00940 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SM121_00945 response regulator transcription factor K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SM121_02240 GHKL domain-containing protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SM121_02245 LytTR family DNA-binding domain-containing protein K12295 comE; two-component system, LytTR family, response regulator ComE
D SM121_07925 HAMP domain-containing sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SM121_07930 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SM121_00045 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_05850 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08630 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00040 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SM121_00035 oppC; (GenBank) oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D SM121_00030 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SM121_00025 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM121_02140 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
D SM121_06025 lacD; (GenBank) tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SM121_03120 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_04220 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_02765 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SM121_04940 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SM121_01395 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SM121_03060 secY2; (GenBank) accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D SM121_00685 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SM121_03080 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_03915 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_05070 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM121_06810 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM121_06330 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SM121_06335 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D SM121_04125
D SM121_08185
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D SM121_01000 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:sden02040]
D SM121_04030 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SM121_08080 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SM121_05340 eno; (GenBank) surface-displayed alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:sden04981]
D SM121_02935 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D SM121_06600 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SM121_06905 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM121_06590 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation [PATH:sden04382]
D SM121_07220 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D SM121_09420 pepC; (GenBank) aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D SM121_03745 hutH; (GenBank) histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sden01501]
D SM121_02165 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SM121_00045 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_05850 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08630 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00040 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SM121_00035 oppC; (GenBank) oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D SM121_00030 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SM121_00025 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM121_09415 pbp1a; (GenBank) penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM121_01145 pbp1b; (GenBank) penicillin-binding protein PBP1B K03693 pbp1b; penicillin-binding protein 1B
D SM121_02750 pbp2a; (GenBank) penicillin-binding protein PBP2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SM121_08515 pbp2b; (GenBank) penicillin-binding protein PBP2B K00687 pbp2B; penicillin-binding protein 2B
D SM121_09470 pbp2X; (GenBank) penicillin-binding protein PBP2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:sden01502]
D SM121_08505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM121_03930 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SM121_08500 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SM121_09465 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SM121_08940 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SM121_00325 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06165 ldcB; (GenBank) LD-carboxypeptidase LdcB/DacB K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sden01503]
D SM121_02225 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM121_04515 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SM121_02445 dltA; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SM121_02450 dltB; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SM121_02455 dltC; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SM121_02460 dltD; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sden01000]
C 01001 Protein kinases [BR:sden01001]
D SM121_09340 pknB; (GenBank) Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SM121_02670 tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SM121_05030 vicK; (GenBank) cell wall metabolism sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SM121_08735 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SM121_07925 HAMP domain-containing sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SM121_06330 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SM121_00145 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SM121_09325 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SM121_00940 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SM121_02240 GHKL domain-containing protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SM121_01200 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SM121_09005 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sden01009]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM121_09345 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SM121_05325 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:sden01002]
D SM121_06060 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SM121_09420 pepC; (GenBank) aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D SM121_06855 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM121_07345 type 1 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM121_00770 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D SM121_02960 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D SM121_02015 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SM121_01960 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SM121_00760 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SM121_05305 DJ-1 family glyoxalase III K03152 thiJ; protein deglycase [EC:3.5.1.124]
D SM121_07145 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D SM121_01995 srtB; (GenBank) class B sortase, LPKTxAVK-specific K08600 srtB; sortase B [EC:3.4.22.71]
D SM121_03460 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D SM121_01055 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D SM121_03110 CPBP family intramembrane glutamic endopeptidase K07052 K07052; CAAX protease family protein
D SM121_06115 CPBP family intramembrane glutamic endopeptidase K07052 K07052; CAAX protease family protein
D SM121_06325 type II CAAX endopeptidase family protein K07052 K07052; CAAX protease family protein
D SM121_07610 CPBP family intramembrane glutamic endopeptidase K07052 K07052; CAAX protease family protein
D SM121_07945 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SM121_08330 pepF; (GenBank) oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SM121_00815 M13-type metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SM121_00325 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06165 ldcB; (GenBank) LD-carboxypeptidase LdcB/DacB K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06135 pepV; (GenBank) dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D SM121_04040 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SM121_06450 pepT; (GenBank) peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SM121_02930 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SM121_07755 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SM121_03840 Xaa-Pro peptidase family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SM121_08260 ZmpA/ZmpB/ZmpC family metallo-endopeptidase K08643 zmpB; zinc metalloprotease ZmpB [EC:3.4.24.-]
D SM121_00560 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D SM121_02150 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SM121_01025 pepA; (GenBank) glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D SM121_05845 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D SM121_04110 htpX; (GenBank) zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SM121_00670 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SM121_02225 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM121_00050 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM121_04430 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SM121_03345 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D SM121_05855 CocE/NonD family hydrolase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D SM121_09035 SepM family pheromone-processing serine protease K07177 K07177; Lon-like protease
D SM121_03435 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SM121_08035 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SM121_00355 rhomboid family intramembrane serine protease K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D SM121_05140 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:sden01003]
D SM121_07220 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D SM121_05010 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SM121_05005 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SM121_08265 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D SM121_09415 pbp1a; (GenBank) penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM121_01145 pbp1b; (GenBank) penicillin-binding protein PBP1B K03693 pbp1b; penicillin-binding protein 1B
D SM121_02750 pbp2a; (GenBank) penicillin-binding protein PBP2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SM121_05210 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_05300 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_02685 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D SM121_00080 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sden01005]
D SM121_07860 glycosyltransferase family 1 protein K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D SM121_07855 glycosyltransferase family 2 protein K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D SM121_07835 rhamnan synthesis F family protein K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D SM121_02975 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D SM121_00080 MraY family glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM121_07870 glycosyltransferase family 2 protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sden01011]
D SM121_07770 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM121_08210 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM121_05920 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SM121_04195 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SM121_08945 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SM121_04400 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SM121_08505 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM121_05235 aminoacyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SM121_05230 aminoacyltransferase K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SM121_03930 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SM121_04255 racE; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SM121_09465 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SM121_08940 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SM121_00090 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM121_09415 pbp1a; (GenBank) penicillin-binding protein PBP1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM121_01145 pbp1b; (GenBank) penicillin-binding protein PBP1B K03693 pbp1b; penicillin-binding protein 1B
D SM121_02750 pbp2a; (GenBank) penicillin-binding protein PBP2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SM121_08515 pbp2b; (GenBank) penicillin-binding protein PBP2B K00687 pbp2B; penicillin-binding protein 2B
D SM121_09470 pbp2X; (GenBank) penicillin-binding protein PBP2X K12556 pbp2X; penicillin-binding protein 2X
D SM121_00050 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM121_05210 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_05300 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_00325 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06165 ldcB; (GenBank) LD-carboxypeptidase LdcB/DacB K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_02015 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SM121_07145 class A sortase K07284 srtA; sortase A [EC:3.4.22.70]
D SM121_01995 srtB; (GenBank) class B sortase, LPKTxAVK-specific K08600 srtB; sortase B [EC:3.4.22.71]
D SM121_04210 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:sden01004]
D SM121_09680 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SM121_06825 3-oxoacyl-[acyl-carrier-protein] synthase III C-terminal domain-containing protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM121_09695 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM121_09670 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM121_08600 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM121_09675 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM121_09660 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM121_09685 fabK; (GenBank) enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SM121_09705 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D SM121_01980 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SM121_07205 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SM121_08435 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:sden01006]
D SM121_08840 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SM121_00680 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SM121_05500 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:sden01007]
D SM121_03040 gltX; (GenBank) glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SM121_01150 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM121_02270 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SM121_00470 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SM121_02545 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM121_08795 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SM121_08895 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SM121_09165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SM121_00795 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM121_05190 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SM121_02470 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM121_06290 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SM121_01590 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SM121_09505 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SM121_09500 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SM121_09640 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SM121_00665 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SM121_05015 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SM121_08310 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SM121_05385 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SM121_05395 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SM121_03955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SM121_01990 pyridoxal phosphate-dependent aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SM121_04415 MalY/PatB family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM121_07185 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM121_03600 pabB; (GenBank) aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sden00194]
D SM121_08220 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SM121_08225 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SM121_08230 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SM121_08235 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SM121_08240 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SM121_08245 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SM121_08255 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SM121_08250 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sden03000]
D SM121_09145 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SM121_05990 DeoR/GlpR family DNA-binding transcription regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SM121_06520 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SM121_03685 DeoR/GlpR family DNA-binding transcription regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D SM121_02485 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM121_05000 ccpA; (GenBank) catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM121_05770 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM121_03860 LacI family DNA-binding transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SM121_06850 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D SM121_03245 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D SM121_08805 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SM121_08395 Crp/Fnr family transcriptional regulator K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D SM121_00550 cyclic nucleotide-binding domain-containing protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D SM121_00375 cadX; (GenBank) Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D SM121_01695 autorepressor SdpR family transcription factor K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D SM121_08625 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D SM121_00845 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SM121_05765 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SM121_02840 AAA family ATPase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SM121_03200 purR; (GenBank) pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SM121_07130 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D SM121_03960 codY; (GenBank) GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D SM121_08775 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D SM121_04060 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D SM121_05420 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D SM121_02220 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SM121_06030 PRD domain-containing protein K02531 lacT; transcriptional antiterminator
D SM121_02550 argR; (GenBank) arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SM121_08365 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SM121_08830 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SM121_00320 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SM121_02815 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D SM121_06430 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SM121_04160 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D SM121_02140 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:sden03021]
D SM121_01365 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SM121_01140 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SM121_01135 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SM121_00265 rpoE; (GenBank) DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SM121_09365 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SM121_08080 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SM121_09550 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SM121_03855 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SM121_02770 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SM121_04215 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:sden03019]
D SM121_05050 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SM121_03030 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SM121_03255 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SM121_09375 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SM121_04945 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SM121_03195 3'-5' exoribonuclease YhaM family protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SM121_08460 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SM121_09460 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SM121_05340 eno; (GenBank) surface-displayed alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM121_00485 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SM121_08045 pfkA; (GenBank) 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM121_00310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SM121_00950 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM121_08115 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:sden03011]
D SM121_07165 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SM121_02780 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SM121_01465 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SM121_02400 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SM121_01410 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SM121_03805 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SM121_03215 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SM121_01425 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SM121_00405 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SM121_01500 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SM121_01370 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SM121_03210 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SM121_01375 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SM121_01430 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SM121_00525 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SM121_06495 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SM121_01450 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SM121_03815 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SM121_01475 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SM121_06175 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SM121_08095 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SM121_04560 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SM121_01480 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SM121_01495 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SM121_01490 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SM121_01435 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SM121_01420 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SM121_02370 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SM121_06625 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SM121_04555 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SM121_06630 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SM121_00410 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SM121_01445 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SM121_01400 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SM121_01460 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SM121_01360 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SM121_01415 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SM121_07395 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SM121_07795 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SM121_05975 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SM121_01470 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SM121_01485 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SM121_01440 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SM121_05985 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SM121_00185 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SM121_01455 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SM121_01405 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SM121_07425 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SM121_01620 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SM121_01625 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM121_02760 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM121_04935 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM121_03135 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SM121_07800 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SM121_01380 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SM121_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_01335 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_02120 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_09265 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_00020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_01350 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_02135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_09280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_01340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_02125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_09270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sden03009]
D SM121_05050 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SM121_04915 era; (GenBank) GTPase Era K03595 era; GTPase
D SM121_08130 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D SM121_09550 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SM121_03855 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D SM121_02770 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SM121_00535 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SM121_08965 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SM121_03160 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SM121_09350 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SM121_06185 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SM121_09045 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SM121_00860 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SM121_04100 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SM121_09480 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SM121_04490 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SM121_08835 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SM121_01180 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D SM121_00425 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SM121_02230 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SM121_07705 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SM121_08995 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SM121_07650 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SM121_04290 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SM121_02745 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SM121_06065 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SM121_07090 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SM121_03285 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SM121_06505 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D SM121_00865 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SM121_02610 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SM121_00465 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SM121_08460 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SM121_09460 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SM121_03175 rsgA; (GenBank) ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SM121_04180 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D SM121_06720 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D SM121_05505 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D SM121_09125 yqeH; (GenBank) ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D SM121_06910 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SM121_00855 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SM121_09530 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D SM121_09555 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D SM121_02285 yaaA; (GenBank) S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D SM121_09100 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D SM121_04905 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D SM121_09120 yhbY; (GenBank) ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D SM121_09285 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D SM121_02195 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D SM121_04130 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:sden03016]
D SM121_05515 rnz; (GenBank) ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SM121_06570 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SM121_00665 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SM121_08895 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SM121_00795 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM121_08795 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SM121_02545 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM121_05190 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SM121_02470 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM121_08310 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SM121_06290 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SM121_05015 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SM121_09640 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SM121_00470 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SM121_09165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SM121_01590 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SM121_05385 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SM121_05395 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SM121_01150 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM121_02270 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SM121_00850 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SM121_09580 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SM121_09560 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SM121_00290 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SM121_08005 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SM121_05960 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_07115 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_06910 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SM121_05500 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SM121_07375 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SM121_02360 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SM121_03115 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SM121_09395 rnpB; (GenBank) RNase P RNA component class B K01978 rnpB; RNase P catalytic RNA component
D SM121_09505 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SM121_09500 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SM121_03040 gltX; (GenBank) glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SM121_05200 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SM121_06145 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D SM121_02890 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SM121_02860 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SM121_06745 trmFO; (GenBank) methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SM121_06510 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SM121_05585 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SM121_04310 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SM121_04230 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D SM121_02350 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SM121_08360 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SM121_03895 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SM121_01505 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SM121_05965 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SM121_02160 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SM121_03280 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SM121_03290 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SM121_09600 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SM121_09090 nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D SM121_04945 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SM121_00485 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:sden03012]
D SM121_09535 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SM121_07805 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SM121_08190 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SM121_02785 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D SM121_05220 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SM121_03220 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D SM121_06920 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SM121_04570 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D SM121_06915 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SM121_02190 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SM121_01385 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SM121_03845 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D SM121_05270 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D SM121_08475 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:sden03110]
D SM121_02820 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SM121_08880 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D SM121_00695 ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D SM121_06605 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SM121_00310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SM121_00950 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM121_00300 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SM121_02865 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D SM121_00315 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SM121_00955 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D SM121_02225 S1C family serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM121_02150 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SM121_08250 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SM121_00295 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_01225 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM121_04515 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SM121_09315 Cof-type HAD-IIB family hydrolase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SM121_08320 prsA; (GenBank) peptidylprolyl isomerase PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SM121_00515 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D SM121_05860 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:sden04131]
D SM121_04135 SPFH domain-containing protein K07192 FLOT; flotillin
D SM121_01235 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D SM121_03225 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM121_08800 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM121_08040 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:sden03032]
D SM121_09145 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SM121_08810 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SM121_02215 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SM121_02375 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM121_08085 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SM121_04165 DNA helicase K03346 dnaB; replication initiation and membrane attachment protein
D SM121_04170 dnaI; (GenBank) primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D SM121_01005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_03810 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_04715 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_08050 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM121_00585 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SM121_02210 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM121_08415 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM121_04480 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM121_03335 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM121_05640 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM121_06725 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SM121_03440 rnhC; (GenBank) ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SM121_01520 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM121_07725 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SM121_09150 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM121_07150 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SM121_05315 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SM121_07190 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SM121_07200 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SM121_06740 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sden03036]
D SM121_09145 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SM121_05050 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SM121_04135 SPFH domain-containing protein K07192 FLOT; flotillin
D SM121_08810 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SM121_02215 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SM121_02800 Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D SM121_05055 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D SM121_04280 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D SM121_04285 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D SM121_08930 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SM121_02175 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D SM121_05275 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SM121_00630 essC; (GenBank) type VII secretion protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SM121_04535 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SM121_09475 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SM121_08935 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D SM121_05210 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_05280 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SM121_08925 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SM121_05320 ezrA; (GenBank) septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D SM121_08900 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D SM121_08915 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D SM121_02025 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SM121_02020 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SM121_05300 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_02220 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SM121_07190 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SM121_07200 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SM121_02360 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SM121_04100 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SM121_06745 trmFO; (GenBank) methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SM121_01635 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SM121_07500 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SM121_06610 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D SM121_08105 whiA; (GenBank) DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:sden03400]
D SM121_04500 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SM121_07290 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SM121_07080 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SM121_08545 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SM121_00875 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SM121_06390 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SM121_07285 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SM121_08885 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SM121_02990 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SM121_02580 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SM121_04920 mutM; (GenBank) DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SM121_08530 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D SM121_05550 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM121_07725 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SM121_01520 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM121_03835 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D SM121_06355 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D SM121_06120 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D SM121_08025 pcrA; (GenBank) DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SM121_01140 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SM121_01135 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SM121_01365 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SM121_00265 rpoE; (GenBank) DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SM121_09365 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SM121_02185 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SM121_02555 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SM121_03455 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SM121_02570 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D SM121_08850 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SM121_08845 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SM121_08050 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM121_00585 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SM121_02210 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM121_08415 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM121_04480 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM121_03335 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM121_05640 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM121_01005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_03810 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_04715 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_09150 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM121_03430 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SM121_02590 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D SM121_02575 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SM121_01855 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SM121_09360 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SM121_03000 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SM121_02280 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SM121_03935 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SM121_01985 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SM121_08510 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D SM121_08825 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SM121_09410 recU; (GenBank) Holliday junction resolvase RecU K03700 recU; recombination protein U
D SM121_05480 addA; (GenBank) helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SM121_05475 rexB; (GenBank) ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SM121_08405 helicase HerA-like domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D SM121_07150 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SM121_05315 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SM121_06740 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SM121_08810 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SM121_03425 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SM121_09205 recX; (GenBank) recombination regulator RecX K03565 recX; regulatory protein
D SM121_05290 bifunctional DnaQ family exonuclease/ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SM121_08300 nrdE; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM121_08305 nrdF; (GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM121_07415 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:sden03029]
D SM121_09535 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SM121_07805 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SM121_02785 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D SM121_05220 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SM121_03220 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D SM121_04915 era; (GenBank) GTPase Era K03595 era; GTPase
D SM121_01150 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM121_00795 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM121_02470 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM121_02545 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM121_03995 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SM121_04000 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SM121_03990 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SM121_01005 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_03810 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_04715 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM121_00310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SM121_00315 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D SM121_00950 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM121_00955 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES
D SM121_00300 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SM121_05960 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_07115 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_03120 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_04220 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sden02000]
D SM121_06240 ABC transporter transmembrane domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06245 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_05460 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06305 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06650 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_05465 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06310 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_06655 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM121_04605 tetA(46); (GenBank) tetracycline efflux ABC transporter Tet(46) subunit A K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SM121_04610 tetB(46); (GenBank) tetracycline efflux ABC transporter Tet(46) subunit B K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SM121_01685 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SM121_07635 msr(D); (GenBank) ABC-F type ribosomal protection protein Msr(D) K18231 msr; macrolide transport system ATP-binding/permease protein
D SM121_06575 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D SM121_05940 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SM121_05935 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D SM121_05930 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D SM121_05925 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SM121_00775 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SM121_00780 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SM121_00455 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SM121_02505 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SM121_02500 ABC transporter permease subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SM121_02495 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SM121_01210 ABC transporter substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D SM121_01220 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D SM121_01215 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D SM121_01000 substrate-binding domain-containing protein K10439 rbsB; ribose transport system substrate-binding protein
D SM121_06205 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D SM121_06220 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SM121_06210 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SM121_00985 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SM121_01795 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SM121_01790 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D SM121_01785 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SM121_07975 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D SM121_07970 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D SM121_07965 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D SM121_07960 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SM121_06320 amino acid ABC transporter substrate-binding protein/permease K10036 glnH; glutamine transport system substrate-binding protein
D SM121_06315 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SM121_04030 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SM121_09455 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D SM121_09450 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SM121_00740 transporter substrate-binding domain-containing protein K16957 tcyK; L-cystine transport system substrate-binding protein
D SM121_00735 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein
D SM121_00730 amino acid ABC transporter permease K16959 tcyM; L-cystine transport system permease protein
D SM121_00725 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SM121_04440 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM121_04445 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D SM121_04450 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D SM121_04455 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM121_04460 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM121_04035 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SM121_04050 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SM121_04045 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SM121_04365 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D SM121_05375 trpX; (GenBank) tryptophan ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D SM121_03015 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D SM121_04370 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D SM121_03020 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D SM121_04375 ATP-binding cassette domain-containing protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D SM121_00100 ABC transporter substrate-binding protein/permease K17073 lysX1; putative lysine transport system substrate-binding protein
D SM121_00105 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SM121_00045 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00800 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_05850 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08540 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_08630 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM121_00040 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SM121_00035 oppC; (GenBank) oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D SM121_00030 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SM121_00025 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM121_04345 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SM121_01255 zinc ABC transporter substrate-binding protein AdcA K09815 znuA; zinc transport system substrate-binding protein
D SM121_08755 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D SM121_01260 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D SM121_01265 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SM121_00830 fimA; (GenBank) metal ABC transporter substrate-binding lipoprotein/fibrin-binding adhesin FimA K19971 psaA; manganese/zinc transport system substrate-binding protein
D SM121_00825 metal ABC transporter permease K19972 psaC; manganese/zinc transport system permease protein
D SM121_00820 metal ABC transporter ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D SM121_07940 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D SM121_03610 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component
D SM121_04055 MptD family putative ECF transporter S component K16926 htsT; energy-coupling factor transport system substrate-specific component
D SM121_02825 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component
D SM121_02320 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D SM121_03615 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D SM121_02310 energy-coupling factor ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_03620 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_02315 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_03625 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SM121_01165 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D SM121_01170 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D SM121_05680 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D SM121_05675 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D SM121_08720 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D SM121_08640 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SM121_08725 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SM121_05185 ABC transporter permease K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D SM121_05180 ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D SM121_05280 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SM121_05275 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SM121_00215 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D SM121_00220 ABC-2 family transporter protein K25155 evrB; viologen exporter family transport system permease protein
D SM121_00225 ATP-binding cassette domain-containing protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D SM121_06400 ATP-binding cassette domain-containing protein K27614 albC; antilisterial bacteriocin subtilosin biosynthesis transport system ATP-binding protein
D SM121_09570 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D SM121_09575 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D SM121_00150 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM121_00930 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM121_03585 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM121_05435 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM121_05880 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM121_07525 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM121_07850 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM121_00155 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_00935 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_03590 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_05430 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_05875 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_06340 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_07520 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_07845 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_08070 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM121_01670 DUF1430 domain-containing protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SM121_04975 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SM121_05650 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SM121_05660 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SM121_01675 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SM121_04970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SM121_05450 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SM121_05655 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SM121_00075 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SM121_06945 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D SM121_01580 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D SM121_07045 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D SM121_08345 MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D SM121_04930 multidrug efflux MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SM121_07640 mef(A); (GenBank) macrolide efflux MFS transporter Mef(A) K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D SM121_08285 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SM121_08290 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SM121_04150 PTS transporter subunit IIBC K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SM121_03870 sucrose-specific PTS transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM121_06530 fructose-specific PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SM121_06035 PTS lactose/cellobiose transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SM121_06040 lactose-specific PTS transporter subunit EIIC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SM121_08660 PTS transporter subunit EIIC K02761 celB; cellobiose PTS system EIIC component
D SM121_05995 PTS sugar transporter subunit IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SM121_06000 PTS sugar transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SM121_06005 PTS transporter subunit IIC K20114 gatC; galactose PTS system EIIC component
D SM121_09620 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM121_01870 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SM121_01880 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_09625 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D SM121_01875 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_09630 PTS system mannose/fructose/sorbose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D SM121_00980 PTS fructose transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SM121_03310 MIP/aquaporin family protein K02440 glpF; glycerol uptake facilitator
D SM121_07435 MIP/aquaporin family protein K02440 glpF; glycerol uptake facilitator
D SM121_00390 potassium channel family protein K10716 kch; voltage-gated potassium channel
D SM121_08090 mscL; (GenBank) large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D SM121_03475 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D SM121_03830 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D SM121_00400 TMEM175 family protein K24915 TMEM175; TMEM175 potassium channel family protein
D SM121_04360 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SM121_03320 CidA/LrgA family protein K06518 cidA; holin-like protein
D SM121_06870 APC family permease K20265 gadC; glutamate:GABA antiporter
D SM121_03660 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SM121_03470 sstT; (GenBank) serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D SM121_04340 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D SM121_03700 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D SM121_04300 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D SM121_03705 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D SM121_04305 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D SM121_01600 solute carrier family 23 protein K02824 uraA; uracil permease
D SM121_06950 nucleobase:cation symporter-2 family protein K16169 pbuX; xanthine permease
D SM121_09605 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D SM121_06995 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D SM121_07350 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SM121_07400 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SM121_04965 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D SM121_09525 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D SM121_03640 AEC family transporter K24180 mleP; malate permease and related proteins
D SM121_03295 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D SM121_03300 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D SM121_04315 ECF transporter S component K23675 fmnP; riboflavin transporter
D SM121_08670 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D SM121_05210 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D SM121_06980 FTR1 family protein K07243 FTR; high-affinity iron transporter
D SM121_06990 efeO; (GenBank) iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO
D SM121_06985 efeB; (GenBank) iron uptake transporter deferrochelatase/peroxidase subunit K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D SM121_07025 ccdA2; (GenBank) thiol-disulfide oxidoreductase-associated membrane protein CcdA2 K06196 ccdA; cytochrome c-type biogenesis protein
D SM121_09030 ccdA2; (GenBank) thiol-disulfide oxidoreductase-associated membrane protein CcdA2 K06196 ccdA; cytochrome c-type biogenesis protein
D SM121_05175 efflux RND transporter periplasmic adaptor subunit K24950 yknX; membrane fusion protein, antimicrobial resistance system
D SM121_02670 tyrosine-protein kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SM121_02665 Wzz/FepE/Etk N-terminal domain-containing protein K19420 epsA; protein tyrosine kinase modulator
D SM121_02845 pnuC; (GenBank) nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
C 02044 Secretion system [BR:sden02044]
D SM121_08430 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D SM121_07790 deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SM121_08425 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D SM121_09295 DEAD/DEAH box helicase K02240 comFA; competence protein ComFA
D SM121_09290 ComF family protein K02242 comFC; competence protein ComFC
D SM121_01100 comGA; (GenBank) competence type IV pilus ATPase ComGA K02243 comGA; competence protein ComGA
D SM121_01095 comGB; (GenBank) competence type IV pilus assembly protein ComGB K02244 comGB; competence protein ComGB
D SM121_01090 comGC; (GenBank) competence type IV pilus major pilin ComGC K02245 comGC; competence protein ComGC
D SM121_01085 comGD; (GenBank) competence type IV pilus minor pilin ComGD K02246 comGD; competence protein ComGD
D SM121_01075 comGF; (GenBank) competence type IV pilus minor pilin ComGF K02248 comGF; competence protein ComGF
D SM121_08980 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SM121_03080 secA2; (GenBank) accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_03915 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM121_02765 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SM121_04940 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SM121_01395 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SM121_03060 secY2; (GenBank) accessory Sec system protein translocase subunit SecY2 K03076 secY; preprotein translocase subunit SecY
D SM121_06810 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM121_05070 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM121_00685 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SM121_03120 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_04220 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM121_03065 asp1; (GenBank) accessory Sec system protein Asp1 K12268 asp1; accessory secretory protein Asp1
D SM121_03070 asp2; (GenBank) accessory Sec system protein Asp2 K12269 asp2; accessory secretory protein Asp2
D SM121_03075 asp3; (GenBank) accessory Sec system protein Asp3 K12270 asp3; accessory secretory protein Asp3
D SM121_06970 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D SM121_06975 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:sden02042]
D SM121_03105 TDT family transporter K11041 eta; exfoliative toxin A/B
D SM121_04360 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SM121_06260 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:sden02022]
D SM121_05030 vicK; (GenBank) cell wall metabolism sensor histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SM121_05025 yycF; (GenBank) response regulator YycF K07668 vicR; two-component system, OmpR family, response regulator VicR
D SM121_08735 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SM121_08740 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SM121_07925 HAMP domain-containing sensor histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SM121_07930 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SM121_06330 HAMP domain-containing sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SM121_06335 response regulator transcription factor K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D SM121_00145 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SM121_00140 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D SM121_09325 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SM121_09320 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D SM121_00940 GHKL domain-containing protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SM121_00945 response regulator transcription factor K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SM121_02240 GHKL domain-containing protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D SM121_02245 LytTR family DNA-binding domain-containing protein K12295 comE; two-component system, LytTR family, response regulator ComE
D SM121_01160 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D SM121_01200 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SM121_09005 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D SM121_01195 response regulator transcription factor K07720 yesN; two-component system, response regulator YesN
D SM121_09010 response regulator transcription factor K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:sden02035]
D SM121_04030 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sden04812]
D SM121_08925 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SM121_08930 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SM121_02220 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sden04147]
D SM121_05340 eno; (GenBank) surface-displayed alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM121_03225 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM121_03235 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SM121_08040 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM121_04515 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SM121_04135 SPFH domain-containing protein K07192 FLOT; flotillin
D SM121_00950 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM121_00310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SM121_02900 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM121_02275 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SM121_05220 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D SM121_09580 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SM121_07155 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_08680 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SM121_01390 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SM121_05560 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SM121_01525 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D SM121_05775 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SM121_08280 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SM121_07445 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SM121_03250 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM121_01940 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SM121_06780 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM121_05075 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SM121_05225 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SM121_08800 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:sden02048]
D SM121_09150 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM121_01065 class I SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SM121_09145 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SM121_00575 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D SM121_00580 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D SM121_09080 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D SM121_09085 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM
D SM121_08925 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SM121_07190 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SM121_07200 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SM121_05960 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM121_07115 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:sden01504]
D SM121_07195 aminoglycoside 6-adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D SM121_04605 tetA(46); (GenBank) tetracycline efflux ABC transporter Tet(46) subunit A K18216 steA; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SM121_04610 tetB(46); (GenBank) tetracycline efflux ABC transporter Tet(46) subunit B K18217 steB; ATP-binding cassette, subfamily B, tetracycline resistant protein
D SM121_07635 msr(D); (GenBank) ABC-F type ribosomal protection protein Msr(D) K18231 msr; macrolide transport system ATP-binding/permease protein
D SM121_07640 mef(A); (GenBank) macrolide efflux MFS transporter Mef(A) K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D SM121_00325 M15 family metallopeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_06165 ldcB; (GenBank) LD-carboxypeptidase LdcB/DacB K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SM121_02445 dltA; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SM121_02450 dltB; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SM121_02455 dltC; (GenBank) D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SM121_02460 dltD; (GenBank) D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sden03100]
D SM121_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_01345 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_02130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_09275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM121_02075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_02080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_02235 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_07160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_07390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_09220 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_09225 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM121_02255 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM121_09715 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM121_02110 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM121_09255 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM121_02775 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SM121_01280 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM121_07170 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM121_01315 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SM121_02145 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SM121_02250 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SM121_01325 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_02040 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_02090 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_09235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM121_01285 tRNA-His K14226 tRNA-His; tRNA His
D SM121_01320 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM121_02035 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM121_00250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_01275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_02085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_02100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_03170 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_09230 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_09245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM121_00895 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM121_02105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM121_09250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM121_01305 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM121_02050 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM121_02060 tRNA-Ile K14230 tRNA-Met; tRNA Met
D SM121_02065 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM121_01300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM121_02045 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM121_02070 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM121_09215 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM121_01310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_02030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_02055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_03165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_08055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM121_00205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_02095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_04600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_09240 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM121_01290 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SM121_01295 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM121_07175 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM121_01330 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM121_02115 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM121_09260 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM121_00020 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_01350 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_02135 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_09280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM121_00010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_01340 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_02125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_09270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM121_00005 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_01335 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_02120 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_09265 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM121_09395 rnpB; (GenBank) RNase P RNA component class B K01978 rnpB; RNase P catalytic RNA component
D SM121_08060 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D SM121_00890 ssrS; (GenBank) 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA
D SM121_02895 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SM121_03500 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D SM121_09015 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D SM121_05580 yghU; (GenBank) glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SM121_00835 tpx; (GenBank) thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SM121_08100 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SM121_02650 nrdG; (GenBank) anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SM121_04380 pflA; (GenBank) pyruvate formate-lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SM121_04955 tehB; (GenBank) SAM-dependent methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D SM121_09390 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SM121_06875 ptcA; (GenBank) putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D SM121_00870 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SM121_05390 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SM121_03690 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D SM121_06110 TIGR01906 family membrane protein K27959 lit; lyso-form N-acyl lipoprotein transferase [EC:2.3.1.-]
D SM121_05115 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SM121_07005 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SM121_00175 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SM121_08150 cdaA; (GenBank) diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SM121_05110 hprK; (GenBank) HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SM121_03035 alpha/beta hydrolase family protein K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D SM121_02660 cps4B; (GenBank) capsular polysaccharide biosynthesis protein Cps4B K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SM121_09130 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SM121_02365 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SM121_03140 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SM121_03145 rnmV; (GenBank) ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SM121_03720 alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D SM121_00805 DUF1958 domain-containing protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D SM121_08350 DUF1958 domain-containing protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D SM121_00555 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SM121_03880 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SM121_07915 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SM121_08120 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SM121_08860 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SM121_05255 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SM121_04420 mgtA; (GenBank) magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D SM121_04545 HAD-IC family P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D SM121_08440 cation-translocating P-type ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D SM121_04465 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D SM121_07820 ferredoxin K05337 fer; ferredoxin
D SM121_00060 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D SM121_08010 FAD-containing oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D SM121_06560 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D SM121_08815 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SM121_02535 nrdI; (GenBank) class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D SM121_08200 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D SM121_04540 VOC family protein K08234 yaeR; glyoxylase I family protein
D SM121_08920 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SM121_02595 spx; (GenBank) transcriptional regulator Spx K16509 spxA; regulatory protein spx
D SM121_07995 Spx/MgsR family RNA polymerase-binding regulatory protein K16509 spxA; regulatory protein spx
D SM121_05095 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D SM121_09310 S1 RNA-binding domain-containing protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D SM121_00270 tig; (GenBank) trigger factor K03545 tig; trigger factor
D SM121_04950 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SM121_08295 nrdH; (GenBank) glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D SM121_00085 mecA; (GenBank) adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D SM121_07135 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SM121_03190 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D SM121_08450 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D SM121_06735 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D SM121_05570 DnaD domain-containing protein K02086 dnaD; DNA replication protein
D SM121_04765 terminase small subunit K07474 xtmA; phage terminase small subunit
D SM121_04770 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit
D SM121_00885 replication-associated recombination protein A K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D SM121_03330 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SM121_09490 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D SM121_08610 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SM121_03465 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SM121_07030 brnQ; (GenBank) branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D SM121_09385 cell division site-positioning protein MapZ family protein K20073 mapZ; mid-cell-anchored protein Z
D SM121_03125 jag; (GenBank) RNA-binding cell elongation regulator Jag/EloR K06346 jag; spoIIIJ-associated protein
D SM121_04005 hypothetical protein K06349 kbaA; KinB signaling pathway activation protein
C 99993 Cell motility
C 99995 Signaling proteins
D SM121_08960 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein
D SM121_00345 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D SM121_04585 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SM121_06160 hypothetical protein K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D SM121_07950 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D SM121_06230 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D SM121_01690 SdpI family protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SM121_08335 competence protein CoiA family protein K06198 coiA; competence protein CoiA
D SM121_01010 DUF4479 and tRNA-binding domain-containing protein K06878 K06878; tRNA-binding protein
D SM121_06415 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D SM121_00055 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SM121_00070 sufD; (GenBank) Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SM121_07750 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D SM121_04075 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D SM121_04105 LemA family protein K03744 lemA; LemA protein
D SM121_06680 LemA family protein K03744 lemA; LemA protein
D SM121_05100 SprT family protein K03095 sprL; SprT-like protein
D SM121_02410 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D SM121_05080 TIGR03943 family protein K08986 ycgQ; putative membrane protein
D SM121_01565 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D SM121_06420 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
C 99997 Function unknown
D SM121_05245 HD domain-containing protein K06885 K06885; uncharacterized protein
D SM121_04240 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D SM121_01515 CoA-binding protein K06929 K06929; uncharacterized protein
D SM121_06485 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D SM121_04235 HD domain-containing protein K06950 K06950; uncharacterized protein
D SM121_05895 HD domain-containing protein K06950 K06950; uncharacterized protein
D SM121_06500 kphA; (GenBank) RNA-binding protein KphA K06960 K06960; uncharacterized protein
D SM121_00420 NYN domain-containing protein K06962 K06962; uncharacterized protein
D SM121_02755 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D SM121_05085 permease K07089 K07089; uncharacterized protein
D SM121_04265 metallophosphoesterase K07095 K07095; uncharacterized protein
D SM121_05520 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D SM121_07225 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D SM121_04325 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D SM121_03520 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D SM121_04295 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D SM121_09190 DUF438 domain-containing protein K09155 K09155; uncharacterized protein
D SM121_00340 PFL family protein K09157 K09157; uncharacterized protein
D SM121_08690 DUF2075 domain-containing protein K09384 K09384; uncharacterized protein
D SM121_01240 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein
D SM121_06820 putative DNA-binding protein K09787 K09787; uncharacterized protein
D SM121_05040 YbaN family protein K09790 K09790; uncharacterized protein
D SM121_04575 cvfB; (GenBank) RNA-binding virulence regulatory protein CvfB K00243 K00243; uncharacterized protein
D SM121_06270 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D SM121_07465 CbrC family protein K09925 K09925; uncharacterized protein
D SM121_07555 CbrC family protein K09925 K09925; uncharacterized protein
D SM121_01850 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D SM121_03755 HutD family protein K09975 K09975; uncharacterized protein
D SM121_04250 YneF family protein K09976 K09976; uncharacterized protein
D SM121_05980 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D SM121_09210 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D SM121_09545 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 13, 2025