+D GENES KO
#
KEGG Orthology (KO) - Spiroplasma diminutum
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sdi00010]
D SDIMI_v3c05610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c01930 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c04140 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c06470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDIMI_v3c02450 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDIMI_v3c08190 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDIMI_v3c01540 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDIMI_v3c07040 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDIMI_v3c07020 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDIMI_v3c01560 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SDIMI_v3c01780 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDIMI_v3c01830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDIMI_v3c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDIMI_v3c07920 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDIMI_v3c07910 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDIMI_v3c07900 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDIMI_v3c07410 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDIMI_v3c02690 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDIMI_v3c06430 gapN; glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SDIMI_v3c04880 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c05320 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c05390 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c05690 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c01110 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDIMI_v3c01630 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDIMI_v3c03970 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:sdi00020]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDIMI_v3c07920 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDIMI_v3c07910 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDIMI_v3c07900 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:sdi00030]
D SDIMI_v3c06470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDIMI_v3c06860 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SDIMI_v3c04170 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SDIMI_v3c00470 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SDIMI_v3c03950 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SDIMI_v3c02690 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDIMI_v3c08390 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDIMI_v3c06430 gapN; glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SDIMI_v3c05010 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D SDIMI_v3c08190 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDIMI_v3c02450 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions
D SDIMI_v3c06860 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:sdi00051]
D SDIMI_v3c04920 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDIMI_v3c02450 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDIMI_v3c03650 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SDIMI_v3c08190 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDIMI_v3c01540 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDIMI_v3c00470 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SDIMI_v3c03660 fruA; PTS system fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:sdi00052]
D SDIMI_v3c02690 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDIMI_v3c05610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c01930 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c04140 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDIMI_v3c01500 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SDIMI_v3c04930 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:sdi00500]
D SDIMI_v3c04960 scrA; PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c05710 PTS system beta-glucoside-specific transporter subunit IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c04940 scrA; PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c01500 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SDIMI_v3c04930 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SDIMI_v3c04980 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c01920 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c05100 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c01960 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c05090 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SDIMI_v3c01950 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SDIMI_v3c04880 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c05320 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c05390 bgl; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c05690 beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDIMI_v3c01110 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDIMI_v3c01490 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05310 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c04890 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05140 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05130 treA; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SDIMI_v3c02690 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDIMI_v3c05610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c01930 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c04140 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c06470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDIMI_v3c04920 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sdi00520]
D SDIMI_v3c01110 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDIMI_v3c01990 nagE; PTS system N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SDIMI_v3c03920 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SDIMI_v3c01530 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SDIMI_v3c04920 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SDIMI_v3c05470 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SDIMI_v3c05460 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D SDIMI_v3c01630 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDIMI_v3c03970 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDIMI_v3c05610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c01930 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c04140 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c02690 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDIMI_v3c06470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:sdi00620]
D SDIMI_v3c07920 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDIMI_v3c07910 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDIMI_v3c07900 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDIMI_v3c07360 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDIMI_v3c07370 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDIMI_v3c01830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDIMI_v3c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDIMI_v3c07410 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDIMI_v3c04190 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SDIMI_v3c02210 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sdi00630]
D SDIMI_v3c04800 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:sdi00640]
D SDIMI_v3c07360 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDIMI_v3c07370 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDIMI_v3c07410 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:sdi00562]
D SDIMI_v3c03940 oxioreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D SDIMI_v3c01540 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sdi00190]
D SDIMI_v3c00540 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SDIMI_v3c00560 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SDIMI_v3c00550 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SDIMI_v3c00530 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SDIMI_v3c00570 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SDIMI_v3c00500 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SDIMI_v3c00520 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SDIMI_v3c00510 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SDIMI_v3c02470 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:sdi00710]
D SDIMI_v3c07020 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDIMI_v3c07040 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDIMI_v3c08190 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDIMI_v3c02450 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDIMI_v3c04170 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SDIMI_v3c00470 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SDIMI_v3c01540 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDIMI_v3c06860 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:sdi00720]
D SDIMI_v3c01480 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SDIMI_v3c01470 folD; methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SDIMI_v3c07370 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDIMI_v3c07360 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:sdi00680]
D SDIMI_v3c04800 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDIMI_v3c01780 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDIMI_v3c08190 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDIMI_v3c02450 glpX; fructose 1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDIMI_v3c07360 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDIMI_v3c07370 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDIMI_v3c01560 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism
D SDIMI_v3c08120 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D SDIMI_v3c07310 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sdi00561]
D SDIMI_v3c06780 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SDIMI_v3c04200 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDIMI_v3c06060 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:sdi00564]
D SDIMI_v3c02550 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SDIMI_v3c04200 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDIMI_v3c06060 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SDIMI_v3c06000 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SDIMI_v3c07170 pgsA; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sdi00230]
D SDIMI_v3c02690 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDIMI_v3c08390 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDIMI_v3c08360 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SDIMI_v3c03580 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SDIMI_v3c00910 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDIMI_v3c08150 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SDIMI_v3c01810 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SDIMI_v3c08350 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SDIMI_v3c07870 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SDIMI_v3c03440 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SDIMI_v3c07880 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SDIMI_v3c03830 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SDIMI_v3c06930 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SDIMI_v3c01030 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDIMI_v3c01010 nrdF; ribonucleoside diphosphate reductase 2 betachain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDIMI_v3c04870 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SDIMI_v3c03590 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SDIMI_v3c08370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SDIMI_v3c06680 ymdB; putative metallophosphatase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SDIMI_v3c07600 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:sdi00240]
D SDIMI_v3c05050 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SDIMI_v3c02260 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SDIMI_v3c08210 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SDIMI_v3c02530 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SDIMI_v3c03850 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SDIMI_v3c00480 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SDIMI_v3c06680 ymdB; putative metallophosphatase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SDIMI_v3c06050 deoA; thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SDIMI_v3c05910 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SDIMI_v3c04870 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SDIMI_v3c01030 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDIMI_v3c01010 nrdF; ribonucleoside diphosphate reductase 2 betachain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDIMI_v3c06130 comEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SDIMI_v3c00090 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SDIMI_v3c08110 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SDIMI_v3c06080 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sdi00250]
D SDIMI_v3c00190 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SDIMI_v3c08370 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SDIMI_v3c08360 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C 00260 Glycine, serine and threonine metabolism [PATH:sdi00260]
D SDIMI_v3c04800 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDIMI_v3c01560 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00270 Cysteine and methionine metabolism [PATH:sdi00270]
D SDIMI_v3c06650 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SDIMI_v3c05650 mtn; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SDIMI_v3c05580 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDIMI_v3c07410 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:sdi00280]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis
D SDIMI_v3c02200 ytjP; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C 00310 Lysine degradation
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:sdi00430]
D SDIMI_v3c07370 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDIMI_v3c07360 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:sdi00450]
D SDIMI_v3c06540 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SDIMI_v3c00700 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SDIMI_v3c05040 L-seryl-tRNA selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SDIMI_v3c08340 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sdi00460]
D SDIMI_v3c00190 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SDIMI_v3c04800 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism [PATH:sdi00480]
D SDIMI_v3c07960 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:sdi00550]
D SDIMI_v3c05920 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SDIMI_v3c06010 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sdi00730]
D SDIMI_v3c07120 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SDIMI_v3c04370 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SDIMI_v3c06870 engC; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SDIMI_v3c06850 thiN; thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SDIMI_v3c07600 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sdi00740]
D SDIMI_v3c07940 yitU; phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SDIMI_v3c04270 ribC_ribF; riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SDIMI_v3c03370 ribC; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:sdi00760]
D SDIMI_v3c07250 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SDIMI_v3c00910 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDIMI_v3c05660 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SDIMI_v3c02880 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SDIMI_v3c02600 cinA; competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SDIMI_v3c02930 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D SDIMI_v3c02070 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:sdi00770]
D SDIMI_v3c07390 putative transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D SDIMI_v3c03980 dfp; pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SDIMI_v3c07380 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SDIMI_v3c04450 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SDIMI_v3c06100 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism [PATH:sdi00785]
D SDIMI_v3c07930 lplA; lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDIMI_v3c07920 pdhA; pyruvate dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SDIMI_v3c07910 pdhB; pyruvate dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SDIMI_v3c07900 pdhC; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:sdi00790]
D SDIMI_v3c05800 hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D SDIMI_v3c06070 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SDIMI_v3c00660 folC; folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:sdi00670]
D SDIMI_v3c06070 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SDIMI_v3c01480 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SDIMI_v3c01470 folD; methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SDIMI_v3c04800 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDIMI_v3c03040 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SDIMI_v3c06080 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sdi00130]
D SDIMI_v3c05230 NADPH dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sdi00900]
D SDIMI_v3c04370 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SDIMI_v3c05990 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SDIMI_v3c00200 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SDIMI_v3c08410 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SDIMI_v3c08250 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SDIMI_v3c02320 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SDIMI_v3c05790 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SDIMI_v3c06010 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SDIMI_v3c04170 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sdi00521]
D SDIMI_v3c05610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c01930 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c04140 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c02690 manB; phosphoglucomutase/phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SDIMI_v3c05610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c01930 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SDIMI_v3c04140 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SDIMI_v3c07310 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D SDIMI_v3c06650 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sdi03020]
D SDIMI_v3c00450 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDIMI_v3c00460 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDIMI_v3c07540 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDIMI_v3c08220 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sdi03010]
D SDIMI_v3c02220 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SDIMI_v3c07740 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SDIMI_v3c07140 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SDIMI_v3c07630 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SDIMI_v3c00210 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SDIMI_v3c08000 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SDIMI_v3c07660 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SDIMI_v3c07420 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SDIMI_v3c07810 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SDIMI_v3c07550 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SDIMI_v3c08010 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SDIMI_v3c07560 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SDIMI_v3c07670 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SDIMI_v3c03380 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SDIMI_v3c02800 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SDIMI_v3c07710 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SDIMI_v3c00230 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SDIMI_v3c07760 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SDIMI_v3c04630 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SDIMI_v3c03990 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SDIMI_v3c00380 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SDIMI_v3c07770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SDIMI_v3c07800 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SDIMI_v3c07790 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SDIMI_v3c07680 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SDIMI_v3c07650 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SDIMI_v3c00430 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SDIMI_v3c00240 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SDIMI_v3c00420 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SDIMI_v3c00370 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SDIMI_v3c07430 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SDIMI_v3c07700 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SDIMI_v3c07620 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SDIMI_v3c07730 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SDIMI_v3c07530 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SDIMI_v3c07640 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SDIMI_v3c02840 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SDIMI_v3c02040 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SDIMI_v3c02160 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SDIMI_v3c07750 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SDIMI_v3c07780 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SDIMI_v3c07690 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SDIMI_v3c02180 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SDIMI_v3c06840 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SDIMI_v3c08140 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SDIMI_v3c06370 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SDIMI_v3c00330 rpmG; 50s ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDIMI_v3c08580 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SDIMI_v3c02030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SDIMI_v3c07570 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SDIMI_v3r030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDIMI_v3r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDIMI_v3r010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sdi00970]
D SDIMI_v3t100 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDIMI_v3t080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDIMI_v3t190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDIMI_v3t010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDIMI_v3t150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDIMI_v3t070 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SDIMI_v3t230 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDIMI_v3t020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDIMI_v3t200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDIMI_v3t290 tRNA-His K14226 tRNA-His; tRNA His
D SDIMI_v3t170 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDIMI_v3t060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDIMI_v3t260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDIMI_v3t210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDIMI_v3t050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDIMI_v3t220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDIMI_v3t120 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDIMI_v3t140 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDIMI_v3t110 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDIMI_v3t160 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDIMI_v3t090 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDIMI_v3t130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDIMI_v3t180 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDIMI_v3t040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDIMI_v3t250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDIMI_v3t270 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SDIMI_v3t240 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDIMI_v3t030 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDIMI_v3t280 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D SDIMI_v3c08240 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SDIMI_v3c01180 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SDIMI_v3c01190 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SDIMI_v3c01170 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SDIMI_v3c05510 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDIMI_v3c07850 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDIMI_v3c03700 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDIMI_v3c00950 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDIMI_v3c05840 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SDIMI_v3c01880 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDIMI_v3c00050 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDIMI_v3c05040 L-seryl-tRNA selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SDIMI_v3c00300 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDIMI_v3c08340 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDIMI_v3c03040 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SDIMI_v3c04660 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDIMI_v3c01390 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDIMI_v3c06170 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDIMI_v3c00180 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDIMI_v3c08460 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDIMI_v3c01650 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDIMI_v3c03690 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDIMI_v3c06400 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDIMI_v3c06390 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDIMI_v3c07200 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDIMI_v3c02060 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sdi03060]
D SDIMI_v3c07610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDIMI_v3c00340 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D SDIMI_v3c00780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SDIMI_v3c08560 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDIMI_v3c00600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDIMI_v3c02640 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDIMI_v3c06700 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SDIMI_v3c06160 lsp; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sdi04122]
D SDIMI_v3c03010 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SDIMI_v3c07120 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sdi03018]
D SDIMI_v3c01780 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDIMI_v3c00790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDIMI_v3c02630 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SDIMI_v3c02100 metallo-beta-lactamase superfamily hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDIMI_v3c06960 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDIMI_v3c02980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sdi03030]
D SDIMI_v3c07090 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDIMI_v3c05970 polC; DNA polymerase III subunit alpha (PolC) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDIMI_v3c00070 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDIMI_v3c00100 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDIMI_v3c04620 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDIMI_v3c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDIMI_v3c00250 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDIMI_v3c05830 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SDIMI_v3c02720 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c00220 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c02680 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SDIMI_v3c06120 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SDIMI_v3c07080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDIMI_v3c01160 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sdi03410]
D SDIMI_v3c00280 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SDIMI_v3c07070 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SDIMI_v3c03780 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SDIMI_v3c04290 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SDIMI_v3c07080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDIMI_v3c01160 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sdi03420]
D SDIMI_v3c00650 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SDIMI_v3c00640 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SDIMI_v3c02120 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SDIMI_v3c00990 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDIMI_v3c07080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDIMI_v3c01160 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sdi03430]
D SDIMI_v3c00990 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDIMI_v3c04340 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SDIMI_v3c04350 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SDIMI_v3c02720 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c00220 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c07090 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDIMI_v3c05970 polC; DNA polymerase III subunit alpha (PolC) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDIMI_v3c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDIMI_v3c00070 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDIMI_v3c04620 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDIMI_v3c00100 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDIMI_v3c01160 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDIMI_v3c05430 dam; adenine specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:sdi03440]
D SDIMI_v3c02720 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c00220 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c05850 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SDIMI_v3c00080 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SDIMI_v3c02610 recA; recombinase A K03553 recA; recombination protein RecA
D SDIMI_v3c07080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDIMI_v3c04010 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SDIMI_v3c04020 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SDIMI_v3c03910 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SDIMI_v3c07090 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDIMI_v3c05970 polC; DNA polymerase III subunit alpha (PolC) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDIMI_v3c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDIMI_v3c00070 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDIMI_v3c04620 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDIMI_v3c00100 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sdi02010]
D SDIMI_v3c01340 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D SDIMI_v3c01330 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D SDIMI_v3c01320 potA; spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SDIMI_v3c00870 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SDIMI_v3c00890 ribose/galactose ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SDIMI_v3c00900 ribose/galactose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SDIMI_v3c00880 ribose/galactose ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SDIMI_v3c06750 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SDIMI_v3c06740 pstA; phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D SDIMI_v3c06730 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDIMI_v3c06250 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDIMI_v3c06290 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SDIMI_v3c06280 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SDIMI_v3c06270 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SDIMI_v3c06260 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SDIMI_v3c07500 cbiQ; cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D SDIMI_v3c07520 cbiO; cobalt ABC transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDIMI_v3c07510 cbiO; cobalt ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS) [PATH:sdi02060]
D SDIMI_v3c01100 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SDIMI_v3c01000 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D SDIMI_v3c01110 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDIMI_v3c01630 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDIMI_v3c03970 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDIMI_v3c01990 nagE; PTS system N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SDIMI_v3c04960 scrA; PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c05710 PTS system beta-glucoside-specific transporter subunit IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c04940 scrA; PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c05400 PTS system beta-glucoside IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SDIMI_v3c01490 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05310 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c04890 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05140 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05470 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SDIMI_v3c04980 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c01920 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c05100 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c01960 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c05090 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SDIMI_v3c01950 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SDIMI_v3c03660 fruA; PTS system fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDIMI_v3c03650 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:sdi03070]
D SDIMI_v3c00340 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D SDIMI_v3c00780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SDIMI_v3c07610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDIMI_v3c08560 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDIMI_v3c00600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDIMI_v3c06700 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SDIMI_v3c02640 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sdi02020]
D SDIMI_v3c06750 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SDIMI_v3c00010 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sdi02024]
D SDIMI_v3c06250 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDIMI_v3c06290 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SDIMI_v3c06280 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SDIMI_v3c06270 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SDIMI_v3c06260 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SDIMI_v3c08560 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDIMI_v3c00340 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D SDIMI_v3c00780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SDIMI_v3c07610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDIMI_v3c00600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDIMI_v3c06700 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SDIMI_v3c02640 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D SDIMI_v3c05820 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SDIMI_v3c01780 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D SDIMI_v3c06250 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDIMI_v3c06290 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SDIMI_v3c06280 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SDIMI_v3c06270 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SDIMI_v3c06260 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sdi01000]
C 01001 Protein kinases [BR:sdi01001]
D SDIMI_v3c06880 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:sdi01009]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDIMI_v3c06890 prpC; phosphorylated protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:sdi01002]
D SDIMI_v3c06160 lsp; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SDIMI_v3c07880 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SDIMI_v3c03250 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D SDIMI_v3c01120 CAAX amino terminal membrane bound protease K07052 K07052; CAAX protease family protein
D SDIMI_v3c07950 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SDIMI_v3c03740 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SDIMI_v3c02440 pepO; endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SDIMI_v3c07960 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SDIMI_v3c02200 ytjP; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SDIMI_v3c07590 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SDIMI_v3c06020 pepQ; Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SDIMI_v3c00130 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SDIMI_v3c05980 rseP; inner membrane zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SDIMI_v3c03150 lonA; class III heat-shock ATP-dependent LonA protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C 01003 Glycosyltransferases [BR:sdi01003]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sdi01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdi01011]
C 01004 Lipid biosynthesis proteins [BR:sdi01004]
D SDIMI_v3c06780 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SDIMI_v3c04200 plsY; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDIMI_v3c06060 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:sdi01006]
D SDIMI_v3c06010 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SDIMI_v3c03400 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:sdi01007]
D SDIMI_v3c08240 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SDIMI_v3c07200 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDIMI_v3c02060 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SDIMI_v3c00300 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDIMI_v3c08460 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDIMI_v3c08340 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDIMI_v3c06170 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDIMI_v3c04660 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDIMI_v3c01390 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDIMI_v3c00180 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDIMI_v3c03700 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDIMI_v3c00950 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDIMI_v3c03690 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDIMI_v3c05840 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SDIMI_v3c00050 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDIMI_v3c01650 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDIMI_v3c01880 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDIMI_v3c05510 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDIMI_v3c07850 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDIMI_v3c06400 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDIMI_v3c06390 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sdi00194]
D SDIMI_v3c00570 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SDIMI_v3c00560 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SDIMI_v3c00550 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SDIMI_v3c00540 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SDIMI_v3c00530 atpH; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SDIMI_v3c00520 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SDIMI_v3c00510 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SDIMI_v3c00500 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sdi03000]
D SDIMI_v3c05580 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDIMI_v3c03640 fruR; DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SDIMI_v3c04950 shypothetical protein K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D SDIMI_v3c04440 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D SDIMI_v3c07300 fur; Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SDIMI_v3c06030 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SDIMI_v3c08280 parB; site-specific DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDIMI_v3c02960 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D SDIMI_v3c06350 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:sdi03021]
D SDIMI_v3c07540 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDIMI_v3c00450 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDIMI_v3c00460 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDIMI_v3c08220 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SDIMI_v3c05820 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SDIMI_v3c03260 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SDIMI_v3c04320 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SDIMI_v3c00350 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SDIMI_v3c02130 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:sdi03019]
D SDIMI_v3c06770 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDIMI_v3c02100 metallo-beta-lactamase superfamily hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDIMI_v3c06960 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SDIMI_v3c02630 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SDIMI_v3c00790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDIMI_v3c06600 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SDIMI_v3c03460 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SDIMI_v3c01780 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDIMI_v3c01820 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDIMI_v3c02980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
C 03041 Spliceosome
C 03011 Ribosome [BR:sdi03011]
D SDIMI_v3c02220 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SDIMI_v3c07740 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SDIMI_v3c07140 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SDIMI_v3c07630 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SDIMI_v3c00210 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SDIMI_v3c08000 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SDIMI_v3c07660 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SDIMI_v3c07420 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SDIMI_v3c07810 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SDIMI_v3c07550 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SDIMI_v3c08010 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SDIMI_v3c07560 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SDIMI_v3c07670 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SDIMI_v3c03380 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SDIMI_v3c02800 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SDIMI_v3c07710 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SDIMI_v3c00230 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SDIMI_v3c07760 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SDIMI_v3c04630 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SDIMI_v3c03990 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SDIMI_v3c00380 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SDIMI_v3c07770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SDIMI_v3c07800 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SDIMI_v3c07790 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SDIMI_v3c07680 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SDIMI_v3c07650 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SDIMI_v3c00240 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SDIMI_v3c00420 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SDIMI_v3c00370 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SDIMI_v3c00430 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SDIMI_v3c07430 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SDIMI_v3c07700 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SDIMI_v3c07620 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SDIMI_v3c07730 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SDIMI_v3c07530 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SDIMI_v3c07640 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SDIMI_v3c02840 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SDIMI_v3c02040 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SDIMI_v3c02160 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SDIMI_v3c07750 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SDIMI_v3c07780 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SDIMI_v3c07690 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SDIMI_v3c02180 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SDIMI_v3c06840 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SDIMI_v3c08140 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SDIMI_v3c06370 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SDIMI_v3c00330 rpmG; 50s ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDIMI_v3c08580 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SDIMI_v3c02030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SDIMI_v3c07570 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SDIMI_v3r010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDIMI_v3r030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDIMI_v3r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sdi03009]
D SDIMI_v3c06770 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDIMI_v3c05860 era; GTP-binding protein Era K03595 era; GTPase
D SDIMI_v3c02870 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D SDIMI_v3c03260 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SDIMI_v3c04320 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SDIMI_v3c00350 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SDIMI_v3c08420 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SDIMI_v3c06920 sunL; RNA-binding Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SDIMI_v3c06940 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SDIMI_v3c03320 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SDIMI_v3c08300 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SDIMI_v3c06340 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SDIMI_v3c02140 yabC; methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SDIMI_v3c04390 yqxC; rRNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SDIMI_v3c00310 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SDIMI_v3c02660 yydA; rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SDIMI_v3c06900 yloN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SDIMI_v3c02360 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SDIMI_v3c01130 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SDIMI_v3c06150 rluD; ribosomal large subunit pseudouridylate synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SDIMI_v3c02820 rimM; 16S rRNA processing protein rimM K02860 rimM; 16S rRNA processing protein RimM
D SDIMI_v3c01800 yrrK; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SDIMI_v3c03460 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SDIMI_v3c06870 engC; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SDIMI_v3c02540 engA; GTP-binding protein EngA K03977 engA; GTPase
D SDIMI_v3c02670 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
D SDIMI_v3c04100 yqeH; GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase
D SDIMI_v3c07150 sua5; tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SDIMI_v3c03590 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SDIMI_v3c03300 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SDIMI_v3c05960 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D SDIMI_v3c05930 yqfG; metalloprotease K07042 ybeY; probable rRNA maturation factor
D SDIMI_v3c08260 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:sdi03016]
D SDIMI_v3c01650 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDIMI_v3c06170 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDIMI_v3c01390 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDIMI_v3c08340 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDIMI_v3c08460 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDIMI_v3c00180 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDIMI_v3c03700 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDIMI_v3c05510 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDIMI_v3c07850 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDIMI_v3c00950 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDIMI_v3c05840 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SDIMI_v3c01880 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDIMI_v3c00050 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDIMI_v3c00300 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDIMI_v3c04660 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDIMI_v3c03690 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDIMI_v3c06400 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDIMI_v3c06390 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDIMI_v3c07200 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDIMI_v3c02060 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SDIMI_v3c06590 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SDIMI_v3c00850 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SDIMI_v3c07490 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SDIMI_v3c03360 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SDIMI_v3c07150 sua5; tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SDIMI_v3c03400 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SDIMI_v3c08540 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SDIMI_v3c08330 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SDIMI_v3c08570 rnpA; ribonuclease P (protein C5) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SDIMI_v3c08240 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SDIMI_v3c00060 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SDIMI_v3c00170 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SDIMI_v3c02760 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SDIMI_v3c06630 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SDIMI_v3c02830 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SDIMI_v3c05810 trmK; tRNA: m1A22 methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SDIMI_v3c03450 cspR; RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SDIMI_v3c06440 spoU; RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D SDIMI_v3c03010 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SDIMI_v3c07120 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SDIMI_v3c00120 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SDIMI_v3c01600 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SDIMI_v3c00920 gcp; DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SDIMI_v3c01590 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SDIMI_v3c00790 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:sdi03012]
D SDIMI_v3c03290 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SDIMI_v3c02020 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SDIMI_v3c02230 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D SDIMI_v3c07980 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SDIMI_v3c07990 fusA; elongation factor G K02355 fusA; elongation factor G
D SDIMI_v3c08100 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SDIMI_v3c02270 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SDIMI_v3c08090 prmC; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SDIMI_v3c08380 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SDIMI_v3c07580 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SDIMI_v3c03050 efp; elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:sdi03110]
D SDIMI_v3c02950 clpB; ATP-dependent Clp protease, ATPase subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SDIMI_v3c01440 ATPase AAA-2 domain-containing protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SDIMI_v3c02980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SDIMI_v3c02990 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SDIMI_v3c00140 hslO; heat shock protein 33 K04083 hslO; molecular chaperone Hsp33
D SDIMI_v3c02970 grpE; molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D SDIMI_v3c00130 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SDIMI_v3c00500 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SDIMI_v3c00360 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SDIMI_v3c01280 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:sdi04131]
D SDIMI_v3c07040 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDIMI_v3c01830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDIMI_v3c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:sdi03032]
D SDIMI_v3c05580 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDIMI_v3c02560 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SDIMI_v3c00010 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SDIMI_v3c00250 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDIMI_v3c05830 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SDIMI_v3c07060 dnaB; chromosome replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D SDIMI_v3c07050 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D SDIMI_v3c02720 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c00220 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c07090 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDIMI_v3c05970 polC; DNA polymerase III subunit alpha (PolC) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDIMI_v3c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDIMI_v3c04620 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDIMI_v3c00100 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDIMI_v3c00070 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDIMI_v3c02680 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SDIMI_v3c06120 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SDIMI_v3c07080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDIMI_v3c01160 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDIMI_v3c05430 dam; adenine specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SDIMI_v3c00040 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SDIMI_v3c00030 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SDIMI_v3c03880 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDIMI_v3c03860 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C 03036 Chromosome and associated proteins [BR:sdi03036]
D SDIMI_v3c05580 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDIMI_v3c06770 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDIMI_v3c02560 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SDIMI_v3c00010 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SDIMI_v3c06760 smc; chromosome condensation and segregation SMC ATPase K03529 smc; chromosome segregation protein
D SDIMI_v3c02340 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SDIMI_v3c02350 scpB; chromosome condensation and segregation factor B K06024 scpB; segregation and condensation protein B
D SDIMI_v3c02110 ftsK; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SDIMI_v3c06320 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SDIMI_v3c07130 hypothetical protein K06286 ezrA; septation ring formation regulator
D SDIMI_v3c06310 hypothetical protein K09772 sepF; cell division inhibitor SepF
D SDIMI_v3c08440 mreB2; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08450 mreB3; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08490 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08500 mreB5; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08520 mreB6; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c02500 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08290 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SDIMI_v3c08280 parB; site-specific DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDIMI_v3c03880 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDIMI_v3c03860 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SDIMI_v3c08330 gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SDIMI_v3c08300 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SDIMI_v3c02760 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SDIMI_v3c06630 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SDIMI_v3c01660 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SDIMI_v3c05190 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein
D SDIMI_v3c00720 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:sdi03400]
D SDIMI_v3c00280 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SDIMI_v3c03780 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SDIMI_v3c07070 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SDIMI_v3c04290 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SDIMI_v3c01160 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDIMI_v3c07080 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDIMI_v3c00650 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SDIMI_v3c00640 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SDIMI_v3c02120 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SDIMI_v3c00990 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDIMI_v3c00450 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDIMI_v3c00460 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDIMI_v3c07540 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDIMI_v3c08220 rpoE; DNA directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SDIMI_v3c04340 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SDIMI_v3c04350 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SDIMI_v3c07090 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDIMI_v3c05970 polC; DNA polymerase III subunit alpha (PolC) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SDIMI_v3c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDIMI_v3c04620 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDIMI_v3c00100 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDIMI_v3c00070 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDIMI_v3c02720 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c00220 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c05430 dam; adenine specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SDIMI_v3c03910 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SDIMI_v3c02610 recA; recombinase A K03553 recA; recombination protein RecA
D SDIMI_v3c04010 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SDIMI_v3c04020 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SDIMI_v3c03960 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D SDIMI_v3c05850 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SDIMI_v3c00080 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SDIMI_v3c02580 recU; Holliday junction-specific endonuclease K03700 recU; recombination protein U
D SDIMI_v3c00040 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SDIMI_v3c00030 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SDIMI_v3c02560 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SDIMI_v3c04400 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SDIMI_v3c01030 nrdE; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDIMI_v3c01010 nrdF; ribonucleoside diphosphate reductase 2 betachain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDIMI_v3c08120 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:sdi03029]
D SDIMI_v3c03290 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SDIMI_v3c02020 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SDIMI_v3c02230 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D SDIMI_v3c07980 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SDIMI_v3c07990 fusA; elongation factor G K02355 fusA; elongation factor G
D SDIMI_v3c05860 era; GTP-binding protein Era K03595 era; GTPase
D SDIMI_v3c07200 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDIMI_v3c01390 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDIMI_v3c03700 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDIMI_v3c05840 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SDIMI_v3c08460 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDIMI_v3c01180 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SDIMI_v3c01190 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SDIMI_v3c01170 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SDIMI_v3c02720 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c00220 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDIMI_v3c02980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SDIMI_v3c02970 grpE; molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D SDIMI_v3c02990 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SDIMI_v3c08560 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sdi02000]
D SDIMI_v3c02740 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SDIMI_v3c03160 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SDIMI_v3c01230 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SDIMI_v3c08470 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SDIMI_v3c08480 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SDIMI_v3c01080 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SDIMI_v3c01910 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SDIMI_v3c01340 potC; spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D SDIMI_v3c01330 potB; spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D SDIMI_v3c01320 potA; spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SDIMI_v3c00870 ribose/galactose ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SDIMI_v3c00890 ribose/galactose ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SDIMI_v3c00900 ribose/galactose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D SDIMI_v3c00880 ribose/galactose ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SDIMI_v3c06750 pstS; phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SDIMI_v3c06740 pstA; phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D SDIMI_v3c06730 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDIMI_v3c06250 oppA; oligopeptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDIMI_v3c06290 oppB; oligopeptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SDIMI_v3c06280 oppC; oligopeptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D SDIMI_v3c06270 oppD; oligopeptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D SDIMI_v3c06260 oppF; oligopeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SDIMI_v3c07500 cbiQ; cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D SDIMI_v3c07520 cbiO; cobalt ABC transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDIMI_v3c07510 cbiO; cobalt ABC transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDIMI_v3c04250 hypothetical protein K25147 berB; beta-exotoxin I transport system permease protein
D SDIMI_v3c04240 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D SDIMI_v3c06220 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SDIMI_v3c04730 transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SDIMI_v3c04120 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c02750 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c00620 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c04720 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c01040 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c01060 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c06230 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c03620 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c03670 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDIMI_v3c07450 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SDIMI_v3c07480 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SDIMI_v3c06800 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SDIMI_v3c00150 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SDIMI_v3c06560 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SDIMI_v3c01100 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SDIMI_v3c01000 ptsH; phosphocarrier protein Hpr K02784 ptsH; phosphocarrier protein HPr
D SDIMI_v3c01110 crr; PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDIMI_v3c01630 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDIMI_v3c03970 ptsG; PTS system glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDIMI_v3c01990 nagE; PTS system N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SDIMI_v3c04960 scrA; PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c05710 PTS system beta-glucoside-specific transporter subunit IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c04940 scrA; PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SDIMI_v3c05400 PTS system beta-glucoside IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SDIMI_v3c01490 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05310 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c04890 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05140 treB; PTS system trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDIMI_v3c05470 murP; PTS system N-acetylmuramic acid-specific EIIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SDIMI_v3c03660 fruA; PTS system fructose-specific IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDIMI_v3c04980 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c01920 celC; PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c05100 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c01960 celA; PTS system cellobiose-specific component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SDIMI_v3c05090 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SDIMI_v3c01950 celB; PTS system cellobiose-specific component IIC K02761 celB; cellobiose PTS system EIIC component
D SDIMI_v3c05700 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D SDIMI_v3c01890 focA; formate/nitrite transporter K06212 focA; formate transporter
D SDIMI_v3c00840 mgtE; Mg2+ transport protein K06213 mgtE; magnesium transporter
D SDIMI_v3c05520 ykbA; amino acid permease K19540 frlA; fructoselysine transporter
D SDIMI_v3c01210 ktrB; potassium uptake protein KtrB K03498 trkH; trk/ktr system potassium uptake protein
D SDIMI_v3c01200 ktrA; potassium uptake protein KtrA K03499 trkA; trk/ktr system potassium uptake protein
D SDIMI_v3c01260 pyrP; uracil permease K02824 uraA; uracil permease
D SDIMI_v3c08160 pbuG; xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D SDIMI_v3c07720 rpmC; 50S ribosomal protein L29 K03646 tolA; colicin import membrane protein
C 02044 Secretion system [BR:sdi02044]
D SDIMI_v3c06130 comEB; deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SDIMI_v3c04640 DNA uptake protein K02238 comEC; competence protein ComEC
D SDIMI_v3c00600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDIMI_v3c00340 hypothetical protein K03073 secE; preprotein translocase subunit SecE
D SDIMI_v3c00780 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SDIMI_v3c07610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SDIMI_v3c02640 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDIMI_v3c06700 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SDIMI_v3c08560 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:sdi02042]
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sdi04812]
D SDIMI_v3c08440 mreB2; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08450 mreB3; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08490 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08500 mreB5; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08520 mreB6; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c02500 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c06320 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SDIMI_v3c08290 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D SDIMI_v3c08280 parB; site-specific DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sdi04147]
D SDIMI_v3c01780 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDIMI_v3c07040 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDIMI_v3c07020 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDIMI_v3c01830 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDIMI_v3c01870 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDIMI_v3c02980 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D SDIMI_v3c06470 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDIMI_v3c07870 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SDIMI_v3c07980 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SDIMI_v3c06590 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SDIMI_v3c07410 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SDIMI_v3c07600 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SDIMI_v3c03580 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SDIMI_v3c07890 pdhD; pyruvate dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDIMI_v3c01540 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:sdi02048]
D SDIMI_v3c05430 dam; adenine specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SDIMI_v3c05440 DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SDIMI_v3c05580 ydiP; DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDIMI_v3c06320 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SDIMI_v3c08440 mreB2; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08450 mreB3; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08490 mreB4; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08500 mreB5; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c08520 mreB6; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c02500 mreB1; cell shape determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SDIMI_v3c03880 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDIMI_v3c03860 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:sdi01504]
D SDIMI_v3c00440 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sdi03100]
D SDIMI_v3t100 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDIMI_v3t080 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDIMI_v3t190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDIMI_v3t010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDIMI_v3t150 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDIMI_v3t070 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SDIMI_v3t230 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDIMI_v3t020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDIMI_v3t200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDIMI_v3t290 tRNA-His K14226 tRNA-His; tRNA His
D SDIMI_v3t170 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDIMI_v3t060 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDIMI_v3t260 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDIMI_v3t210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDIMI_v3t050 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDIMI_v3t220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDIMI_v3t120 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDIMI_v3t140 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDIMI_v3t110 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDIMI_v3t160 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDIMI_v3t090 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDIMI_v3t130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDIMI_v3t180 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDIMI_v3t040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDIMI_v3t250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDIMI_v3t270 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SDIMI_v3t240 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDIMI_v3t030 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDIMI_v3t280 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D SDIMI_v3r030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDIMI_v3r020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDIMI_v3r010 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SDIMI_v3c05160 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D SDIMI_v3c03840 acpD; azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SDIMI_v3c02700 nox; NADH oxidase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D SDIMI_v3c03070 msrAB; peptide methionine sulfoxide reductase MsrA/MsrB K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SDIMI_v3c01400 hypothetical protein K02217 ftnA; ferritin [EC:1.16.3.2]
D SDIMI_v3c01580 ycgT; thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SDIMI_v3c01450 tpx; thiol peroxidase K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SDIMI_v3c04860 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SDIMI_v3c00710 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SDIMI_v3c00690 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SDIMI_v3c06820 yloV; dihydroxyacetone/glyceraldehyde kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SDIMI_v3c00680 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SDIMI_v3c04090 yqeG; putative phosphatase HAD-superfamily/subfamily IIIa protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SDIMI_v3c08530 tatD; Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SDIMI_v3c08430 primase-like protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SDIMI_v3c06950 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SDIMI_v3c02410 putative chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SDIMI_v3c03470 two-component regulator system yien regulator component protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SDIMI_v3c01220 ctp; cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SDIMI_v3c04790 ctp; cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SDIMI_v3c01360 mgtA; Mg(2+) transport ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D SDIMI_v3c02510 hypothetical protein K05337 fer; ferredoxin
D SDIMI_v3c06530 sufU; FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D SDIMI_v3c07270 degV; DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D SDIMI_v3c07280 degV; DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SDIMI_v3c01020 nrdI; ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
D SDIMI_v3c05290 hypothetical protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D SDIMI_v3c03140 tig; trigger factor K03545 tig; trigger factor
D SDIMI_v3c00800 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D SDIMI_v3c02730 DNA processing/uptake protein K04096 smf; DNA processing protein
D SDIMI_v3c02570 putative dnad-like replication protein K02086 dnaD; DNA replication protein
D SDIMI_v3c03170 yrvN; recombination factor protein RarA K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SDIMI_v3c08310 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SDIMI_v3c08320 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D SDIMI_v3c01770 typA; GTP-binding protein K06207 typA; GTP-binding protein
C 99992 Structural proteins
C 99994 Others
D SDIMI_v3c06720 phoU; phosphate transport system regulator PhoU K02039 phoU; phosphate transport system protein
D SDIMI_v3c06640 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SDIMI_v3c07260 putative tRNA-binding protein K06878 K06878; tRNA-binding protein
D SDIMI_v3c06520 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SDIMI_v3c06550 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SDIMI_v3c00750 LemA family protein K03744 lemA; LemA protein
D SDIMI_v3c02620 hypothetical protein K01421 yhgE; putative membrane protein
C 99997 Function unknown
D SDIMI_v3c08230 HD superfamily phosphohydrolase K06885 K06885; uncharacterized protein
D SDIMI_v3c05280 yqkD; hydrolase K06889 K06889; uncharacterized protein
D SDIMI_v3c05530 putative hydrolase K06889 K06889; uncharacterized protein
D SDIMI_v3c06240 hypothetical protein K06889 K06889; uncharacterized protein
D SDIMI_v3c00940 hypothetical protein K06889 K06889; uncharacterized protein
D SDIMI_v3c02710 proton/glutamate symporter K06956 K06956; uncharacterized protein
D SDIMI_v3c07160 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D SDIMI_v3c06690 hypothetical protein K09787 K09787; uncharacterized protein
D SDIMI_v3c05020 outer surface protein K09963 K09963; uncharacterized protein
D SDIMI_v3c01970 hypothetical protein K09963 K09963; uncharacterized protein
D SDIMI_v3c04180 hypothetical protein K09976 K09976; uncharacterized protein
D SDIMI_v3c02170 hypothetical protein K07584 ysxB; uncharacterized protein
D SDIMI_v3c01670 uncharacterized protein associated with RNAses G and E K07586 ygaC; uncharacterized protein
D SDIMI_v3c03270 ylxR; putative RNA-binding protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024