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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Stegodyphus dumicola</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        118205300 DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        118184714 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        118195569 DNA-directed RNA polymerase II subunit RPB3-like	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
D      Pol II specific subunits
E        118198354 DNA-directed RNA polymerase II subunit RPB4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        118203798 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
D      Pol I, II, III common subunits
E        118194660 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        118196714 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        118184507 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        118195516 transcription initiation factor IIA subunit 1-like	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        118199536 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        118179498 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        118190899 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        118202104 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        118180811 transcription initiation factor TFIID subunit 1-like isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        118204619 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        118192691 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        118191421 transcription initiation factor TFIID subunit 3-like isoform X1	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        118198363 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        118196056 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        118199980 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        118185885 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        118196437 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        118187712 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        118187825 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        118184343 transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        118196218 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        118184584 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        118199823 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        118189256 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        118179428 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
D      TFIIE
E        118198939 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        118199964 general transcription factor IIE subunit 2-like	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        118191829 general transcription factor IIF subunit 2-like isoform X1	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        118197350 general transcription factor IIH subunit 1-like	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        118188564 general transcription factor IIH subunit 3-like	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        118188999 general transcription factor IIH subunit 4-like	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        118202957 general transcription and DNA repair factor IIH helicase subunit XPB-like	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        118179701 general transcription and DNA repair factor IIH helicase subunit XPD-like	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        118196138 cyclin-dependent kinase 7-like	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        118203308 CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        118189228 cyclin-H-like	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        118199541 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        118204031 mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        118182407 mediator of RNA polymerase II transcription subunit 8-like isoform X1	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        118188778 mediator of RNA polymerase II transcription subunit 11-like	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        118204236 mediator of RNA polymerase II transcription subunit 17-like	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        118205236 mediator of RNA polymerase II transcription subunit 18-like	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        118188945 mediator of RNA polymerase II transcription subunit 19-like	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        118191296 mediator of RNA polymerase II transcription subunit 20-like isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        118197252 mediator of RNA polymerase II transcription subunit 22-like	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        118188195 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        118182662 mediator of RNA polymerase II transcription subunit 29-like	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        118186288 mediator of RNA polymerase II transcription subunit 30-like	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        118189837 mediator of RNA polymerase II transcription subunit 1-like	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        118180997 mediator of RNA polymerase II transcription subunit 4-like	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        118186392 mediator of RNA polymerase II transcription subunit 7-like	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        118184618 protein NCBP2AS2 homolog	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        118191808 mediator of RNA polymerase II transcription subunit 10-like	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        118194548 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        118201482 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        118195503 mediator of RNA polymerase II transcription subunit 31-like	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        118191879 mediator of RNA polymerase II transcription subunit 14-like	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        118182027 mediator of RNA polymerase II transcription subunit 15-like isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        118184390 mediator of RNA polymerase II transcription subunit 16-like	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        118197550 cyclin-dependent kinase 8-like	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        118184516 cyclin-C-like isoform X1	K15161 CCNC; cyclin-C 
E        118205313 cyclin-C-like	K15161 CCNC; cyclin-C 
E        118189914 mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        118197102 mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        118192889 mediator of RNA polymerase II transcription subunit 23-like	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        118191928 mediator of RNA polymerase II transcription subunit 24-like	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        118185094 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        118198316 mediator of RNA polymerase II transcription subunit 26-like	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        118191974 mediator of RNA polymerase II transcription subunit 27-like	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        118189606 histone acetyltransferase KAT2A-like isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        118193460 transformation/transcription domain-associated protein-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        118193461 transformation/transcription domain-associated protein-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        118205958 transcriptional adapter 2-alpha-like isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        118192155 transcriptional adapter 2-beta-like	K15127 TADA2B; transcriptional adapter 2-beta 
E        118201737 uncharacterized protein LOC118201737 isoform X1	K11315 TADA3; transcriptional adapter 3 
E        118201886 uncharacterized protein LOC118201886	K11315 TADA3; transcriptional adapter 3 
E        118206015 transcriptional adapter 3-like	K11315 TADA3; transcriptional adapter 3 
E        118192691 transcription initiation factor TFIID subunit 2-like	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        118198363 transcription initiation factor TFIID subunit 4-like isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        118196056 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        118199980 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        118185885 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        118196437 transcription initiation factor TFIID subunit 6-like	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        118187712 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        118187825 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        118196218 transcription initiation factor TFIID subunit 9-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        118184584 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        118199823 transcription initiation factor TFIID subunit 10-like	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        118179428 transcription initiation factor TFIID subunit 12-like	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        118199068 ataxin-7-like protein 3	K11363 SGF11; SAGA-associated factor 11 
E        118192413 SAGA-associated factor 29-like isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        118193329 SAGA-associated factor 29-like	K11364 SGF29; SAGA-associated factor 29 
E        118202953 STAGA complex 65 subunit gamma-like	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        118194378 uncharacterized protein LOC118194378	K11318 ATXN7; ataxin-7 
E        118187979 transcription and mRNA export factor ENY2-2-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        118179655 ubiquitin carboxyl-terminal hydrolase 22-like isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        118190606 splicing factor 3B subunit 3-like	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        118199619 LOW QUALITY PROTEIN: probable global transcription activator SNF2L2	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        118181392 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        118185523 SWI/SNF complex subunit SMARCC2-like isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        118202905 brahma-associated protein of 60 kDa-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        118189238 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        118193407 LOW QUALITY PROTEIN: actin, clone 403-like	K05692 ACTB_G1; actin beta/gamma 1 
E        118201461 actin-like protein 6B	K11652 ACTL6B; actin-like protein 6B 
E        118181800 AT-rich interactive domain-containing protein 1A-like isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        118190639 AT-rich interactive domain-containing protein 2-like isoform X1	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        118202702 protein polybromo-1-like isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        118181392 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        118203312 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        118179963 cell division cycle and apoptosis regulator protein 1-like isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        118183394 transcription elongation factor S-II-like	K03145 TFIIS; transcription elongation factor S-II 
E        118184112 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        118186302 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
E        118199044 LOW QUALITY PROTEIN: transcription elongation factor SPT6-like	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        118201251 transcription termination factor 2-like	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        118187545 uncharacterized protein LOC118187545	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        118189518 uncharacterized protein LOC118189518 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        118201561 cleavage and polyadenylation specificity factor subunit 1-like	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        118202967 cleavage and polyadenylation specificity factor 73-like	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        118200890 cleavage and polyadenylation specificity factor subunit 4-like	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        118191759 serine/threonine-protein phosphatase PP1-gamma catalytic subunit B-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        118196618 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        118185427 symplekin-like	K06100 SYMPK; symplekin 
E        118205255 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        118190123 5'-3' exoribonuclease 2-like	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        118183542 uncharacterized protein LOC118183542	K14845 RAI1; RAT1-interacting protein 
E        118191627 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        118199944 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        118179389 regulation of nuclear pre-mRNA domain-containing protein 1B-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        118202787 SR-related and CTD-associated factor 4-like isoform X1	K13191 RBM16; RNA-binding protein 16 
E        118187073 putative peptidyl-prolyl cis-trans isomerase dodo	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        118189178 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        118195145 parafibromin-like	K15175 CDC73; parafibromin 
E        118203523 RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        118189807 RNA polymerase-associated protein LEO1-like	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        118195143 RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        118193806 negative elongation factor A-like isoform X1	K15179 WHSC2; negative elongation factor A 
E        118180770 negative elongation factor D-like	K15181 TH1L; negative elongation factor C/D 
E        118193484 negative elongation factor E-like	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        118202044 RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        118180943 ELL-associated factor 1-like	K15186 EAF; ELL-associated factor 
E        118195127 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        118198168 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        118202044 RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
E        118185892 bromodomain-containing protein 3-like isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        118195127 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        118198168 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        118180977 protein HEXIM1-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        118191751 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        118196307 7SK snRNA methylphosphate capping enzyme-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        118184248 la-related protein 7-like	K15191 LARP7; La-related protein 7 
E        118195127 cyclin-T2-like isoform X1	K15188 CCNT; cyclin T 
E        118198168 cyclin-dependent kinase 9-like	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        118197840 TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        118180894 protein Dr1-like	K21751 DR1; down-regulator of transcription 1 
E        118192582 dr1-associated corepressor-like isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        118191366 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        118198324 AF4/FMR2 family member 3-like	K15194 AFF2; AF4/FMR2 family member 2 
E        118198679 AF4/FMR2 family member 1-like isoform X1	K15194 AFF2; AF4/FMR2 family member 2 
E        118186757 RNA polymerase II subunit A C-terminal domain phosphatase-like	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        118193011 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        118188818 cysteine/serine-rich nuclear protein 3-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        118194454 RNA polymerase II-associated protein 1-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        118192787 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        118190156 RNA polymerase II-associated protein 3-like isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        118192654 cyclin-K-like isoform X1	K23326 CCNK; cyclin K 
E        118192977 GPN-loop GTPase 2-like	K24104 GPN; GPN-loop GTPase 
E        118193613 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
E        118188192 probable RNA polymerase II nuclear localization protein SLC7A6OS isoform X1	K28237 SLC7A6OS; RNA polymerase II nuclear localization protein 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        118193780 LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        118202790 DNA-directed RNA polymerase III subunit RPC2-like	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        118183225 DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        118197054 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        118179734 DNA-directed RNA polymerase III subunit RPC3-like	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        118183830 DNA-directed RNA polymerase III subunit RPC4-like	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        118186203 uncharacterized protein LOC118186203 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        118179756 DNA-directed RNA polymerase III subunit RPC5-like isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        118193300 DNA-directed RNA polymerase III subunit RPC6-like	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        118203542 DNA-directed RNA polymerase III subunit RPC7-like isoform X1	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        118203917 DNA-directed RNA polymerase III subunit RPC8-like	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        118197426 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        118194660 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        118196714 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        118184507 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      TFIIIA
E        118189924 transcription factor IIIA-like isoform X1	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        118190899 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        118202104 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        118195688 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        118185329 transcription factor IIIB 50 kDa subunit-like	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
D      TFIIIC
E        118183407 general transcription factor 3C polypeptide 1-like	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        118183557 uncharacterized protein LOC118183557	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        118202464 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        118201244 uncharacterized protein LOC118201244 isoform X1	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        118184955 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
D      TFIIIC, fungi type
E        118184955 general transcription factor 3C polypeptide 5-like	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        118202464 general transcription factor 3C polypeptide 3-like	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        118179623 snRNA-activating protein complex subunit 3-like	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
E        118189526 POU domain, class 2, transcription factor 3-like isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        118190633 zinc finger protein 143-like isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        118188034 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        118196950 DNA-directed RNA polymerase I subunit RPA1-like	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        118201892 DNA-directed RNA polymerase I subunit RPA2-like	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        118205064 DNA-directed RNA polymerase I subunit RPA2-like isoform X1	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        118183225 DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        118197054 DNA-directed RNA polymerases I and III subunit RPAC2-like	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        118190570 DNA-directed RNA polymerase I subunit RPA49-like isoform X1	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        118203113 DNA-directed RNA polymerase I subunit RPA49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        118204420 DNA-directed RNA polymerase I subunit RPA43-like	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        118183641 DNA-directed RNA polymerase I subunit RPA12-like	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        118194660 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        118196714 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        118184507 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
C    Basal transcription factors
D      SL1/TIF-1B
E        118190899 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        118202104 TATA-box-binding protein 2-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        118194294 TATA box-binding protein-associated factor RNA polymerase I subunit B-like	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
C    Other transcription-related factors
D      UBF
E        118189371 nucleolar transcription factor 1-B-like	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        118187417 RNA polymerase I-specific transcription initiation factor RRN3-like	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        118184112 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        118186302 transcription elongation factor SPT5-like	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        118202113 LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        118179498 transcription initiation factor IIB-like	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        118198939 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#Last updated: April 17, 2025