+E
#
Transcription Machinery - Sulfuricella denitrificans
%
!
AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E SCD_n00650 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E SCD_n00618 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E SCD_n00619 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E SCD_n00512 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E SCD_n02447 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
E SCD_n01090 rpoS; RNA polymerase sigma factor rpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E SCD_n01120 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
E SCD_n01390 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCD_n03097 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCD_n00186 rpoE8; ECF subfamily RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E SCD_n02641 RNA polymerase sigma-32 subunit RpoH K03089 rpoH; RNA polymerase sigma-32 factor
E SCD_n00557 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E SCD_n01266 sigma 28 (flagella/sporulation) K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E SCD_n01716 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E SCD_n00843 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
E SCD_n00613 nusG; NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
E SCD_n00604 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A
E SCD_n00605 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
E SCD_n00228 hypothetical protein K17762 rsbS; rsbT antagonist protein RsbS
E SCD_n00227 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17763 rsbR; rsbT co-antagonist protein RsbR
E SCD_n01391 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
E SCD_n01392 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
E SCD_n01393 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
E SCD_n01967 positive regulator of sigma E activity K03803 rseC; sigma-E factor negative regulatory protein RseC
D Transcription elongation factors
E SCD_n01709 dksA; TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
E SCD_n00979 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
E SCD_n00920 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
E SCD_n02348 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D Transcription termination factor
E SCD_n00735 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
E SCD_n01543 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024