+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Sulfitobacter dubius

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D R1T39_05045 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D R1T39_18645 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E R1T39_09525 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centrosome associated proteins D R1T39_02900 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors D R1T39_18525 strawberry notch family protein K26273 SBNO; protein strawberry notch # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D R1T39_14860 H-NS histone family protein K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D R1T39_11500 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D R1T39_02540 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D R1T39_15570 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D R1T39_10410 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D R1T39_12330 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D R1T39_03860 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D R1T39_06730 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D R1T39_00225 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D R1T39_09340 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D R1T39_16040 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D R1T39_00120 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D R1T39_03515 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D R1T39_08990 AAA family ATPase K03529 smc; chromosome segregation protein D R1T39_02510 ScpA family protein K05896 scpA; segregation and condensation protein A D R1T39_02515 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D R1T39_16380 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D R1T39_05690 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D R1T39_14720 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D R1T39_05775 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D R1T39_12315 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D R1T39_05780 cell division protein FtsL K03586 ftsL; cell division protein FtsL D R1T39_05695 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D R1T39_05735 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D R1T39_14725 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D R1T39_05685 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D R1T39_01985 cell division protein ZapA K09888 zapA; cell division protein ZapA D R1T39_09790 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D R1T39_04745 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D R1T39_03275 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D R1T39_17095 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly C Other chromosome partitioning proteins D R1T39_12910 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D R1T39_12905 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D R1T39_12900 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D R1T39_12890 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D R1T39_09105 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein D R1T39_10745 ParA family protein K03496 parA; chromosome partitioning protein D R1T39_15890 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein D R1T39_18640 ParA family protein K03496 parA; chromosome partitioning protein D R1T39_17875 repA; plasmid partitioning protein RepA K03496 parA; chromosome partitioning protein D R1T39_18755 AAA family ATPase K03496 parA; chromosome partitioning protein D R1T39_05025 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D R1T39_10740 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D R1T39_15885 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D R1T39_17870 repB; plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D R1T39_18545 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D R1T39_08895 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D R1T39_06570 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D R1T39_10755 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D R1T39_10750 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D R1T39_04075 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D R1T39_07415 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D R1T39_04255 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D R1T39_13185 site-specific integrase K04763 xerD; integrase/recombinase XerD D R1T39_13280 site-specific integrase K04763 xerD; integrase/recombinase XerD D R1T39_05805 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D R1T39_15920 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D R1T39_08540 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 30, 2024