+D GENES KO
#
KEGG Orthology (KO) - Shigella dysenteriae Sd197
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sdy00010]
D SDY_2587 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SDY_4226 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_1816 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SDY_4250 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SDY_3819 glpX; GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDY_2270 conserved hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SDY_3157 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4132 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_3826 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDY_1488 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDY_3156 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDY_0702 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_4656 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_4045 yibO; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SDY_2996 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDY_1905 pykF; pyruvate kinase I, fructose stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_1141 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_1794 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SDY_0144 aceE; pyruvate dehydrogenase decarboxylase component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SDY_0145 aceF; pyruvate dehydrogenase dihydrolipoyltransacetylase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_1461 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D SDY_1295 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase/pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDY_1608 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDY_4288 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D SDY_0703 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SDY_3863 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SDY_0978 agp; periplasmic glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D SDY_3858 yihX; putative phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D SDY_0628 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDY_1487 yeaD; conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D SDY_3673 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SDY_2912 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDY_2614 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDY_2049 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDY_1842 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle) [PATH:sdy00020]
D SDY_0658 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SDY_0025 acnB; aconitate hydrase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SDY_2016 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SDY_0664 sucA; 2-oxoglutarate dehydrogenase, decarboxylase component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SDY_0665 sucB; 2-oxoglutarate dehydrogenase, dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_0667 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SDY_0666 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SDY_0661 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_0662 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_0659 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SDY_0660 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SDY_4398 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_4397 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_4396 frdC; fumarate reductase, anaerobic K00246 frdC; succinate dehydrogenase subunit C
D SDY_4395 frdD; fumarate reductase, anaerobic K00247 frdD; succinate dehydrogenase subunit D
D SDY_1828 fumA; fumarase A K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SDY_4231 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SDY_1827 fumC; fumarase C K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SDY_1904 conserved hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D SDY_3147 yggD; putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D SDY_3412 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SDY_0866 yojH; conserved hypothetical protein K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SDY_3673 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SDY_0144 aceE; pyruvate dehydrogenase decarboxylase component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SDY_0145 aceF; pyruvate dehydrogenase dihydrolipoyltransacetylase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDY_1461 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:sdy00030]
D SDY_4226 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDY_1138 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SDY_2011 ybhE; putative isomerase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SDY_2212 gnd; gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SDY_3693 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SDY_3141 tktA; transketolase 1 isozyme K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SDY_0008 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SDY_3168 rpiA; ribosephosphate isomerase, constitutive K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SDY_4641 deoC; 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SDY_3995 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SDY_4643 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SDY_3701 yhfW; putative mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SDY_0628 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDY_4122 phnN; ATP-binding component of phosphonate transport K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D SDY_1256 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDY_1137 edd; 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D SDY_1136 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SDY_4350 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SDY_3588 gntK; gluconokinase 2, thermoresistant K00851 idnK; gluconokinase [EC:2.7.1.12]
D SDY_2270 conserved hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SDY_3157 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4132 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4250 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SDY_3819 glpX; GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_1816 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:sdy00040]
D SDY_3276 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D SDY_2213 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SDY_1288 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_2203 galF; probable UDP-gal transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_4365 sgaH; probable hexulose-6-phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SDY_4367 sgaE; putative epimerase/aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SDY_0088 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SDY_3693 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SDY_0089 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D SDY_0090 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D SDY_3842 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D SDY_3844 rhaD; rhamnulose-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D SDY_4131 conserved hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D SDY_1493 ydjJ; putative oxidoreductase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SDY_3020 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D SDY_3021 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D SDY_3017 fucA; L-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:sdy00051]
D SDY_0345 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SDY_1829 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SDY_3020 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D SDY_3021 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D SDY_3017 fucA; L-fuculose-1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D SDY_2440 conserved hypothetical protein K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53]
D SDY_3842 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D SDY_3844 rhaD; rhamnulose-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D SDY_1051 conserved hypothetical protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_1816 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SDY_4250 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SDY_3819 glpX; GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDY_2902 srlD; glucitol-6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D SDY_3145 putative oxidoreductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D SDY_4317 putative L-sorbose 1-phosphate dehydrogenase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D SDY_2316 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SDY_1493 ydjJ; putative oxidoreductase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SDY_2270 conserved hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SDY_3157 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4132 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_3826 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDY_2315 fruA; PTS system, fructose-specific transport protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDY_1963 manX; PTS enzyme IIAB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDY_1965 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
D SDY_3143 cmtB; PTS system, mannitol-specific enzyme II component, cryptic K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SDY_3144 cmtA; PTS system, mannitol-specific enzyme II component, cryptic K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SDY_2489 yfbT; putative phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D SDY_1820 yniC; putative phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D SDY_2901 srlB; PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SDY_2898 srlA; PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SDY_4315 sorbose-permease PTS system IIC component K02814 sorA; sorbose PTS system EIIC component
D SDY_4316 PTS system, mannose-specific IID component K02815 sorM; sorbose PTS system EIID component
C 00052 Galactose metabolism [PATH:sdy00052]
D SDY_0703 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SDY_3863 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SDY_0704 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SDY_0705 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SDY_0706 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SDY_1288 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_2203 galF; probable UDP-gal transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_0628 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDY_2587 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SDY_0378 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SDY_4092 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
D SDY_3641 putative phosphotransferase system enzyme subunit K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SDY_2265 gatB; galactitol-specific enzyme IIB of phosphotransferase system K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDY_3642 putative phosphotransferase system enzyme IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDY_3643 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D SDY_2263 gatD; galactitol-1-phosphate dehydrogenase K00094 E1.1.1.251; galactitol-1-phosphate 5-dehydrogenase [EC:1.1.1.251]
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_1816 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SDY_2269 gatY; tagatose-bisphosphate aldolase 1 K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D SDY_2558 sucrose hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:sdy00053]
D SDY_2213 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SDY_4364 ptxA; putative PTS system enzyme II A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDY_4363 sgaB; conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDY_4362 sgaT; conserved hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component
D SDY_4361 yjfR; conserved hypothetical protein K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D SDY_4365 sgaH; probable hexulose-6-phosphate synthase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SDY_4367 sgaE; putative epimerase/aldolase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SDY_0088 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SDY_3320 yhaF; conserved hypothetical protein K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
C 00500 Starch and sucrose metabolism [PATH:sdy00500]
D SDY_2558 sucrose hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SDY_1288 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_2203 galF; probable UDP-gal transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_2156 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SDY_4553 yhjO; putative cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D SDY_2912 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SDY_3576 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SDY_3575 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SDY_3578 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SDY_3574 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SDY_3659 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SDY_3577 glgX; GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D SDY_1088 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SDY_3660 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SDY_2614 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDY_1842 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SDY_4168 putative 6-phospho-beta-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D SDY_1193 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D SDY_1246 treA; trehalase, periplasmic K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D SDY_4259 treB; PTS system enzyme II, trehalose specific K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDY_4258 treC; trehalase 6-P hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SDY_0628 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDY_2587 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SDY_4226 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDY_0345 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sdy00520]
D SDY_2043 ycfO; conserved hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SDY_2614 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDY_0613 nagE; PTS system, N-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SDY_2031 ycfX; putative NAGC-like transcriptional regulator K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D SDY_0611 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SDY_0612 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SDY_0345 yajF; possible NAGC-like transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SDY_4019 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SDY_3357 mrsA; phosphoglucomutase- and phosphomannomutase-like protein K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SDY_4018 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SDY_2625 putative PTS enzyme II K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SDY_2624 yfeU; putative regulator K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D SDY_1863 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D SDY_3370 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDY_3756 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SDY_3397 yhcI; putative NAGC-like transcriptional regulator K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D SDY_3398 yhcJ; putative enzyme K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SDY_3400 nanA; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D SDY_3962 wecB; UDP-N-acetyl glucosamine -2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SDY_3961 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SDY_2451 putative transformylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D SDY_2449 hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SDY_2450 putative sugar transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D SDY_2452 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D SDY_2049 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDY_1842 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SDY_2587 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SDY_0628 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDY_1288 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_2203 galF; probable UDP-gal transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_2213 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SDY_0704 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SDY_0705 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SDY_0706 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SDY_1963 manX; PTS enzyme IIAB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDY_1965 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
D SDY_4226 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDY_1829 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SDY_3576 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:sdy00620]
D SDY_1461 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D SDY_0144 aceE; pyruvate dehydrogenase decarboxylase component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SDY_0145 aceF; pyruvate dehydrogenase dihydrolipoyltransacetylase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_2358 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDY_3306 tdcE; probable formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDY_1295 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase/pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDY_1608 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDY_4288 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D SDY_2492 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDY_2493 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDY_1905 pykF; pyruvate kinase I, fructose stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_1141 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_0201 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SDY_3432 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SDY_3433 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SDY_2515 accD; acetylCoA carboxylase, carboxytransferase component, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SDY_0943 conserved hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SDY_4038 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D SDY_2392 poxB; pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D SDY_1464 ldhA; fermentative D-lactate dehydrogenase, NAD-dependent K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SDY_2155 dld; D-lactate dehydrogenase, FAD protein K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D SDY_1877 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SDY_0231 gloB; probable hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SDY_2330 ycbL; conserved hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SDY_1004 ycdW; putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SDY_4350 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SDY_2645 putative multimodular enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SDY_3412 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SDY_0866 yojH; conserved hypothetical protein K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SDY_1828 fumA; fumarase A K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SDY_4231 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SDY_1827 fumC; fumarase C K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SDY_1904 conserved hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D SDY_3147 yggD; putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D SDY_4398 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_4397 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_4396 frdC; fumarate reductase, anaerobic K00246 frdC; succinate dehydrogenase subunit C
D SDY_4395 frdD; fumarate reductase, anaerobic K00247 frdD; succinate dehydrogenase subunit D
D SDY_3791 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SDY_3673 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SDY_1794 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SDY_0101 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sdy00630]
D SDY_4328 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D SDY_3412 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SDY_0658 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SDY_0025 acnB; aconitate hydrase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SDY_0674 putative glutamate mutase subumit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D SDY_0676 putative glutamate mutase S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D SDY_0673 putative methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D SDY_1004 ycdW; putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SDY_4350 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SDY_3694 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SDY_3873 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDY_2741 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDY_3178 gcvP; glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SDY_3176 gcvT; aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_3177 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SDY_0395 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D SDY_3319 yhaE; putative dehydrogenase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D SDY_3318 yhaD; conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SDY_3016 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D SDY_1701 yeaU; putative tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D SDY_1136 eda; 2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SDY_3849 fdoG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SDY_3850 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SDY_3851 fdoI; formate dehydrogenase, cytochrome B556 (FDO) subunit K00127 fdoI; formate dehydrogenase subunit gamma
D SDY_1284 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SDY_2571 putative enzyme K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8]
C 00640 Propanoate metabolism [PATH:sdy00640]
D SDY_2492 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDY_3307 tdcD; putative kinase K00932 tdcD; propionate kinase [EC:2.7.2.15]
D SDY_2493 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_2358 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDY_3306 tdcE; probable formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDY_3428 yhdH; putative dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SDY_0201 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SDY_3432 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SDY_3433 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SDY_2515 accD; acetylCoA carboxylase, carboxytransferase component, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SDY_0666 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SDY_0667 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SDY_0025 acnB; aconitate hydrase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SDY_0938 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D SDY_3063 yqhD; putative oxidoreductase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D SDY_3780 gldA; glycerol dehydrogenase, (NAD) K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SDY_3016 fucO; L-1,2-propanediol oxidoreductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
C 00650 Butanoate metabolism [PATH:sdy00650]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SDY_1295 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase/pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDY_1701 yeaU; putative tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D SDY_0661 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_0662 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_0659 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SDY_0660 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SDY_4398 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_4397 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_4396 frdC; fumarate reductase, anaerobic K00246 frdC; succinate dehydrogenase subunit C
D SDY_4395 frdD; fumarate reductase, anaerobic K00247 frdD; succinate dehydrogenase subunit D
D SDY_1615 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_3532 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_1632 putative aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D SDY_2358 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDY_3306 tdcE; probable formate acetyltransferase 3 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SDY_1461 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D SDY_3980 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0107 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_4155 ilvB; acetolactate synthase I,valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0108 ilvH; acetolactate synthase III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_4154 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_3979 ilvM; acetolactate synthase II, valine insensitive, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:sdy00660]
D SDY_3980 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0107 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_4155 ilvB; acetolactate synthase I,valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0108 ilvH; acetolactate synthase III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_4154 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_3979 ilvM; acetolactate synthase II, valine insensitive, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SDY_0666 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SDY_0667 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SDY_0673 putative methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D SDY_0674 putative glutamate mutase subumit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D SDY_0676 putative glutamate mutase S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D SDY_0099 leuC; 3-isopropylmalate isomerase subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SDY_0098 leuD; isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SDY_0100 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:sdy00562]
D SDY_2729 suhB; SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SDY_0956 appA; phosphoanhydride phosphorylase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D SDY_3826 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sdy00190]
D SDY_2484 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D SDY_2483 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D SDY_2482 nuoC; NADH dehydrogenase I chain C, D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D SDY_2481 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D SDY_2480 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D SDY_2479 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D SDY_2478 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D SDY_2477 nuoI; NADH dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D SDY_2476 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D SDY_2475 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D SDY_2474 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D SDY_2473 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D SDY_2472 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D SDY_2041 ndh; respiratory NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SDY_0661 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_0662 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_0659 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SDY_0660 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SDY_4398 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_4397 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_4396 frdC; fumarate reductase, anaerobic K00246 frdC; succinate dehydrogenase subunit C
D SDY_4395 frdD; fumarate reductase, anaerobic K00247 frdD; succinate dehydrogenase subunit D
D SDY_0953 appC; probable third cytochrome oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SDY_0680 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SDY_0954 appB; probable third cytochrome oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SDY_0681 cydB; cytochrome d terminal oxidase polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SDY_0682 ybgT; putative outer membrane lipoprotein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SDY_0955 yccB; Uncharacterized protein K22501 appX; cytochrome bd-II ubiquinol oxidase subunit AppX [EC:7.1.1.7]
D SDY_4014 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SDY_4016 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SDY_4015 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SDY_4013 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SDY_4017 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SDY_4010 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SDY_4012 atpF; membrane-bound ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SDY_4011 atpE; membrane-bound ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SDY_4462 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SDY_2690 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:sdy00710]
D SDY_3156 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDY_1488 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDY_2270 conserved hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SDY_3157 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4132 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4250 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SDY_3819 glpX; GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDY_3141 tktA; transketolase 1 isozyme K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SDY_3168 rpiA; ribosephosphate isomerase, constitutive K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SDY_3826 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDY_3693 rpe; D-ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SDY_0008 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SDY_3791 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SDY_3673 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SDY_2645 putative multimodular enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SDY_3412 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:sdy00720]
D SDY_1461 ydbK; putative oxidoreductase, Fe-S subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D SDY_1794 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SDY_3791 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SDY_3412 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SDY_1828 fumA; fumarase A K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SDY_4231 fumB; fumarase B K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SDY_1827 fumC; fumarase C K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SDY_1904 conserved hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2]
D SDY_3147 yggD; putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D SDY_0661 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_0662 sdhB; succinate dehydrogenase, iron sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_0659 sdhC; succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SDY_0660 sdhD; succinate dehydrogenase, hydrophobic subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SDY_4398 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_4397 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_4396 frdC; fumarate reductase, anaerobic K00246 frdC; succinate dehydrogenase subunit C
D SDY_4395 frdD; fumarate reductase, anaerobic K00247 frdD; succinate dehydrogenase subunit D
D SDY_0667 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SDY_0666 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SDY_2016 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SDY_0025 acnB; aconitate hydrase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SDY_0201 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SDY_3432 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SDY_3433 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SDY_2515 accD; acetylCoA carboxylase, carboxytransferase component, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SDY_0281 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SDY_3776 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SDY_2493 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDY_2492 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:sdy00680]
D SDY_2112 yeiG; putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D SDY_3849 fdoG; formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SDY_3850 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SDY_3851 fdoI; formate dehydrogenase, cytochrome B556 (FDO) subunit K00127 fdoI; formate dehydrogenase subunit gamma
D SDY_2741 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDY_2996 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDY_3791 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SDY_3412 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SDY_2270 conserved hypothetical protein K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SDY_3157 fba; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4132 putative aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SDY_4250 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SDY_3819 glpX; GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_1816 pfkB; 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D SDY_0972 torD; part of trimethylamine-N-oxide oxidoreductase K03533 torD; TorA specific chaperone
D SDY_1171 bisZ; biotin sulfoxide reductase 2 K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D SDY_2492 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SDY_2493 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDY_1794 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SDY_0702 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_4656 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_4045 yibO; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SDY_3169 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SDY_2354 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SDY_4649 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:sdy00910]
D SDY_1278 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SDY_1279 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1280 narH; nitrate reductase 1, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1651 narY; cryptic nitrate reductase 2, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1282 narI; nitrate reductase 1, cytochrome b(NR), gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1653 narV; cryptic nitrate reductase 2, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SDY_0872 napA; probable nitrate reductase 3 K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D SDY_0875 napB; cytochrome c-type protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D SDY_3527 nirB; nitrite reductase (NAD(P)H) subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D SDY_3528 nirD; nitrite reductase (NAD(P)H) subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D SDY_2390 ybjW; putative prismane K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D SDY_1514 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SDY_3873 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDY_3393 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SDY_3394 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SDY_0035 yadF; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sdy00920]
D SDY_2621 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SDY_3830 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SDY_2620 cysU; sulfate, thiosulfate transport system permease T protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D SDY_2619 cysW; ABC-type sulfate transport system, permease component K02047 cysW; sulfate/thiosulfate transport system permease protein
D SDY_2618 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SDY_0505 tauA; taurine transport system periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D SDY_0503 tauC; taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D SDY_0504 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D SDY_0502 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D SDY_2320 ycbO; conserved hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SDY_2323 ycbM; putative transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D SDY_2324 ycbE; putative ATP-binding component of a transport system K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SDY_2322 hypothetical protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D SDY_2321 hypothetical protein K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D SDY_2319 ycbP; conserved hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SDY_2950 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SDY_2951 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SDY_2949 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SDY_4385 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SDY_2964 cysH; 3'-phosphoadenosine 5'-phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SDY_2966 cysJ; sulfite reductase (NADPH), flavoprotein beta subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SDY_2965 cysI; sulfite reductase, alpha subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D SDY_1898 ydhU; conserved hypothetical protein K08354 phsC; thiosulfate reductase cytochrome b subunit
D SDY_2717 sseA; putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SDY_3650 glpE; protein of glp regulon K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D SDY_4040 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SDY_0749 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SDY_2611 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SDY_4330 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SDY_3774 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SDY_2367 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D SDY_2365 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sdy00061]
D SDY_0201 accA; acetylCoA carboxylase, carboxytransferase component, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SDY_3432 accB; acetylCoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SDY_3433 accC; acetyl CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SDY_2515 accD; acetylCoA carboxylase, carboxytransferase component, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SDY_2056 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SDY_P162 acp; Acp K02078 acpP; acyl carrier protein
D SDY_2058 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SDY_2059 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SDY_2522 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SDY_2055 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDY_3629 putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDY_2057 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDY_0927 fabA; beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SDY_0196 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SDY_1368 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SDY_1709 fadD; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:sdy00071]
D SDY_2543 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_3900 fadA; thiolase I K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SDY_1709 fadD; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDY_3053 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D SDY_1295 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase/pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDY_1608 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:sdy00121]
D SDY_1838 hdhA; NAD-dependent 7alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sdy00561]
D SDY_3318 yhaD; conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SDY_1248 putative dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SDY_3780 gldA; glycerol dehydrogenase, (NAD) K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SDY_3818 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SDY_4533 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SDY_2060 plsX; glycerolphosphate auxotrophy in plsB background K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SDY_3242 ygiH; conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDY_3219 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SDY_4532 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SDY_4092 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:sdy00564]
D SDY_4041 gpsA; glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SDY_2436 glpA; sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SDY_3649 glpD; sn-glycerol-3-phosphate dehydrogenase (aerobic) K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SDY_2437 glpB; sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D SDY_2438 glpC; sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D SDY_4533 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SDY_3242 ygiH; conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDY_3219 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SDY_4532 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SDY_3922 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SDY_3918 pldB; lysophospholipase L(2) K01048 pldB; lysophospholipase [EC:3.1.1.5]
D SDY_2434 glpQ; glycerophosphodiester phosphodiesterase, periplasmic K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SDY_3053 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D SDY_2638 eutC; ethanolamine ammonia-lyase, light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D SDY_0191 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SDY_2828 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SDY_4432 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SDY_1106 pgsA; phosphatidylglycerophosphate synthetase CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SDY_0316 pgpA; phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D SDY_1354 pgpB; non-essential phosphatidylglycerophosphate phosphatase, membrane bound K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D SDY_2750 yfhB; conserved hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D SDY_1307 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SDY_0814 ybhO; putative synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SDY_2304 ymdC; putative synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:sdy00565]
D SDY_3922 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:sdy00600]
D SDY_0378 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SDY_4092 melA; alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D SDY_3922 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D SDY_3922 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:sdy00592]
D SDY_3922 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SDY_2543 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_3900 fadA; thiolase I K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:sdy01040]
D SDY_0404 tesA; acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SDY_0389 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D SDY_1317 yciA; conserved hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sdy00230]
D SDY_3206 yqiE; conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SDY_3681 yrfE; conserved hypothetical protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D SDY_4643 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SDY_3701 yhfW; putative mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SDY_0628 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDY_1256 prsA; phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SDY_2511 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SDY_3721 purD; phosphoribosylglycinamide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SDY_2689 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SDY_1135 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D SDY_2747 purL; phosphoribosylformyl-glycineamide synthetase FGAM synthetase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SDY_2688 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SDY_0274 purK; AIR carboxylase, CO(2)-fixing subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SDY_0275 purE; AIR carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SDY_2664 purC; phosphoribosylaminoimidazole-succinocarboxamide synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SDY_2021 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SDY_3720 purH; phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SDY_0450 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SDY_P064 ushA; UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SDY_0438 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SDY_2943 surE; survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SDY_0609 nagD; N-acetylglucosamine metabolism K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SDY_3679 yrfG; putative phosphatase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D SDY_0442 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D SDY_4644 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDY_0352 yaiE; conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SDY_2836 yfiH; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SDY_0034 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SDY_2704 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SDY_2714 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SDY_4655 yjjX; conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D SDY_3118 yggV; putative ribosomal protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SDY_0479 gpt; guanine-hypoxanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SDY_2703 guaA; GMP synthetase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SDY_0134 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SDY_4080 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SDY_2428 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit, B1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDY_2868 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDY_2429 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit, B2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDY_2869 nrdF; ribonucleoside-diphosphate reductase 2, beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDY_4257 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SDY_2487 putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D SDY_4082 spoT; (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SDY_3970 gppA; guanosine pentaphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SDY_2691 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SDY_3001 relA; (p)ppGpp synthetase I K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D SDY_3940 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D SDY_4412 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SDY_1846 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SDY_2253 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D SDY_3012 ygdH; conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SDY_4146 yicP; probable adenine deaminase (synthesis xanthine) K01486 ade; adenine deaminase [EC:3.5.4.2]
D SDY_4383 cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D SDY_0445 adk; Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D SDY_2998 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SDY_3208 icc; regulator of lacZ K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D SDY_0074 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D SDY_2949 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SDY_2950 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SDY_2951 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SDY_1038 conserved hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D SDY_0397 ybbT; conserved hypothetical protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
C 00240 Pyrimidine metabolism [PATH:sdy00240]
D SDY_0055 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SDY_0054 carA; carbamoyl-phosphate synthetase, glutamine subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SDY_4264 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SDY_4263 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D SDY_2091 pyrC; dihydro-orotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SDY_0918 pyrD; dihydro-orotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SDY_4073 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SDY_1357 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SDY_0187 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SDY_2714 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SDY_2998 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SDY_3423 yhdE; conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SDY_3268 ygjP; conserved hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D SDY_2997 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SDY_2348 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SDY_1516 conserved hypothetical protein K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D SDY_2196 udk; uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SDY_P064 ushA; UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SDY_0438 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SDY_2943 surE; survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SDY_0609 nagD; N-acetylglucosamine metabolism K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SDY_4633 yjjG; putative phosphatase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D SDY_3912 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D SDY_0352 yaiE; conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SDY_2687 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SDY_4383 cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D SDY_2104 yeiK; conserved hypothetical protein K10213 rihB; ribosylpyrimidine nucleosidase [EC:3.2.2.8]
D SDY_0052 yaaF; conserved hypothetical protein K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-]
D SDY_3012 ygdH; conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SDY_2144 cdd; cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SDY_4257 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SDY_2197 dcd; 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SDY_2428 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit, B1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDY_2868 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDY_2429 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit, B2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDY_2869 nrdF; ribonucleoside-diphosphate reductase 2, beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDY_2487 putative alpha helix protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D SDY_2052 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SDY_4070 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SDY_4642 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D SDY_1290 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SDY_3044 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SDY_2140 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D SDY_0987 conserved hypothetical protein K09018 rutA; pyrimidine oxygenase [EC:1.14.99.46]
D SDY_0982 conserved hypothetical protein K09024 rutF; flavin reductase [EC:1.5.1.-]
D SDY_0985 conserved hypothetical protein K09021 rutC; aminoacrylate peracid reductase
D SDY_0984 putative acetyltransferase K09023 rutD; aminoacrylate hydrolase [EC:3.5.1.-]
D SDY_1586 ydfG; putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SDY_0983 putative enzyme K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sdy00250]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_2815 nadB; quinolinate synthetase, B protein K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SDY_1506 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SDY_3115 ansB; periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SDY_0759 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SDY_4004 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SDY_0608 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SDY_0245 yafV; putative amidase-type enzyme K13566 NIT2; omega-amidase [EC:3.5.1.3]
D SDY_2486 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SDY_4444 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D SDY_3351 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SDY_3795 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SDY_4412 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SDY_2021 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SDY_4264 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SDY_4263 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D SDY_1615 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_3532 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_1632 putative aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D SDY_3393 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SDY_3394 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SDY_1514 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SDY_3873 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDY_0055 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SDY_0054 carA; carbamoyl-phosphate synthetase, glutamine subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SDY_1631 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SDY_4019 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SDY_2511 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sdy00260]
D SDY_4227 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDY_0002 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SDY_3775 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SDY_3579 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SDY_0003 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SDY_0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SDY_2393 ybjU; putative arylsulfatase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D SDY_2741 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDY_1004 ycdW; putative dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SDY_4350 yiaE; putative dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SDY_3318 yhaD; conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SDY_0702 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_4656 gpmB; phosphoglyceromutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_4045 yibO; putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SDY_3169 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SDY_2354 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SDY_4649 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SDY_1586 ydfG; putative oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SDY_4050 kbl; 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SDY_4049 tdh; threonine dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D SDY_3178 gcvP; glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SDY_3176 gcvT; aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_3177 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SDY_2828 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SDY_3014 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDY_1720 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDY_3304 yhaP; putative L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDY_3309 tdcB; threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SDY_3976 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SDY_2561 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D SDY_3057 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SDY_1328 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SDY_1329 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:sdy00270]
D SDY_4040 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SDY_0749 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SDY_2611 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SDY_3065 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SDY_1845 malY; MalY K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SDY_4322 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SDY_3914 metE; tetrahydropteroyltriglutamate methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SDY_3130 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SDY_0027 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SDY_0028 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SDY_0175 pfs; conserved hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SDY_2836 yfiH; conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SDY_4520 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SDY_1980 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SDY_1045 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDY_2884 ygaG; conserved hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SDY_4227 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDY_0002 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SDY_3775 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SDY_3579 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SDY_4330 metA; homoserine transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SDY_3774 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SDY_3978 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDY_2885 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SDY_3125 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_2717 sseA; putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SDY_3057 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SDY_1098 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D SDY_3412 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SDY_3014 sdaB; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDY_1720 sdaA; L-serine deaminase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDY_3304 yhaP; putative L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SDY_2617 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D SDY_3169 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SDY_2354 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:sdy00280]
D SDY_3978 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SDY_2543 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_3900 fadA; thiolase I K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sdy00290]
D SDY_3309 tdcB; threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SDY_3976 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SDY_0099 leuC; 3-isopropylmalate isomerase subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SDY_0098 leuD; isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SDY_0100 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SDY_3980 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0107 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_4155 ilvB; acetolactate synthase I,valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0108 ilvH; acetolactate synthase III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_4154 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_3979 ilvM; acetolactate synthase II, valine insensitive, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SDY_3974 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SDY_3977 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SDY_3978 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDY_3707 avtA; alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D SDY_2486 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SDY_0101 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:sdy00300]
D SDY_4227 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDY_0002 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SDY_3775 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SDY_3579 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SDY_2667 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SDY_0053 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SDY_0182 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SDY_3521 argD; acetylornithine delta-aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SDY_2656 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SDY_3936 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SDY_3055 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SDY_0115 murE; meso-diaminopimelate-adding enzyme K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SDY_0116 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:sdy00310]
D SDY_0665 sucB; 2-oxoglutarate dehydrogenase, dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SDY_3057 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SDY_1730 putative aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SDY_1757 conserved hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D SDY_1675 ydiJ; putative oxidase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:sdy00220]
D SDY_4276 argI; ornithine carbamoyltransferase 1 K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SDY_3351 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SDY_3795 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SDY_1631 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SDY_3873 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDY_0055 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SDY_0054 carA; carbamoyl-phosphate synthetase, glutamine subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SDY_1514 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_2486 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SDY_3035 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D SDY_3794 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SDY_3793 argC; N-acetyl-gamma-glutamylphosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SDY_3521 argD; acetylornithine delta-aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SDY_3792 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:sdy00330]
D SDY_4094 adiA; biodegradative arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D SDY_3134 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D SDY_3139 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D SDY_3107 speC; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SDY_0028 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SDY_0027 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SDY_1730 putative aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SDY_1530 conserved hypothetical protein K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D SDY_1532 conserved hypothetical protein K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D SDY_1531 putative aldehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D SDY_1533 ydjS; conserved hypothetical protein K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D SDY_1947 putative glutamine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D SDY_1943 ordL; probable oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D SDY_0356 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SDY_0474 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SDY_0473 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:sdy00340]
D SDY_2222 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SDY_2215 hisI; phosphoribosyl-amp cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D SDY_2217 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SDY_2218 hisH; glutamine amidotransferase subunit of heterodimer with HisF K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SDY_2216 hisF; imidazole glycerol phosphate synthase subunit in heterodimer with HisH K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SDY_2219 hisB; imidazoleglycerolphosphate dehydratase/histidinol-phosphate phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D SDY_2220 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SDY_2221 hisD; L-histidinal:NAD+ oxidoreductase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:sdy00350]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_2220 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SDY_4520 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SDY_1295 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase/pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SDY_1608 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDY_0798 ybiC; putative dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:sdy00360]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_2220 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SDY_4520 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SDY_1226 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SDY_0798 ybiC; putative dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00380 Tryptophan metabolism [PATH:sdy00380]
D SDY_0665 sucB; 2-oxoglutarate dehydrogenase, dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sdy00400]
D SDY_1798 aroH; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SDY_0701 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SDY_2765 aroF; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SDY_3690 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SDY_1474 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SDY_3458 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SDY_1475 ydiB; putative oxidoreductase K05887 ydiB; quinate/shikimate dehydrogenase [EC:1.1.1.282]
D SDY_3689 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SDY_0355 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SDY_2353 aroA; 5-enolpyruvylshikimate-3-phosphate synthetase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SDY_2528 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SDY_1332 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SDY_1331 trpD; anthranilate synthase component II K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D SDY_1330 trpC; N-(5-phosphoribosyl)anthranilate isomerase/indole-3-glycerolphosphate synthetase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D SDY_1328 trpA; tryptophan synthase, alpha protein K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SDY_1329 trpB; tryptophan synthase, beta protein K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SDY_2766 tyrA; chorismate mutase-T K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D SDY_2767 pheA; chorismate mutase-P K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_2220 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SDY_4520 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:sdy00410]
D SDY_0041 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SDY_1615 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_3532 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_1730 putative aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SDY_0155 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SDY_2140 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:sdy00430]
D SDY_1615 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_3532 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_3595 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SDY_0502 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D SDY_2493 pta; phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SDY_2492 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:sdy00440]
D SDY_4123 phnO; putative regulator, phn operon K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280]
D SDY_4117 phnI; phosphonate metabolism K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D SDY_4116 phnH; phosphonate metabolism K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D SDY_4120 phnL; ATP-binding component of phosphonate transport K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D SDY_4121 phnM; phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D SDY_4118 phnJ; phosphonate metabolism K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D SDY_4124 phnP; phosphonate metabolism K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:sdy00450]
D SDY_3774 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SDY_3065 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SDY_1845 malY; MalY K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SDY_4322 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SDY_3914 metE; tetrahydropteroyltriglutamate methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SDY_1911 conserved hypothetical protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SDY_2373 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SDY_2950 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SDY_2951 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SDY_1509 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SDY_4212 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SDY_2181 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sdy00460]
D SDY_2156 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SDY_3595 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SDY_1506 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SDY_3115 ansB; periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SDY_0759 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SDY_4004 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SDY_2741 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:sdy00470]
D SDY_4521 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D SDY_0122 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_0365 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_3057 ygeA; putative resistance proteins K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SDY_1631 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SDY_3761 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SDY_0118 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SDY_1403 ycjG; putative muconate cycloisomerase I K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D SDY_2561 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D SDY_1098 yedO; putative 1-aminocyclopropane-1-carboxylate deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D SDY_3936 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SDY_3055 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SDY_1226 dadA; D-amino acid dehydrogenase subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:sdy00480]
D SDY_3595 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SDY_1270 chaC; cation transport regulator K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D SDY_0648 ybgL; putative lactam utilization protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D SDY_0646 ybgJ; putative carboxylase K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D SDY_0647 ybgK; putative carboxylase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D SDY_0494 ybdK; conserved hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D SDY_2885 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SDY_3125 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SDY_4284 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SDY_2719 pepB; putative peptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D SDY_2325 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SDY_0480 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D SDY_1858 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SDY_0838 yliJ; putative transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SDY_3562 gor; glutathione oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SDY_2016 icdA; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SDY_2212 gnd; gluconate-6-phosphate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SDY_1138 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SDY_1805 btuE; vitamin B12 transport protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SDY_3107 speC; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SDY_0028 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SDY_3085 gsp; glutathionylspermidine synthetase/amidase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:sdy00511]
D SDY_0378 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:sdy00540]
D SDY_0197 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SDY_0126 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SDY_0195 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SDY_0276 ybbF; conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SDY_0198 lpxB; tetraacyldisaccharide-1-P K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SDY_2343 ycaH; YcaH K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SDY_3378 yrbH; putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SDY_1264 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SDY_3379 yrbI; conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SDY_2340 kdsB; CTP:CMP-3-deoxy-D-manno-octulosonate transferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SDY_4063 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SDY_2293 htrB; heat shock protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SDY_1142 msbB; suppressor of htrB K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SDY_P110 msbB2; MsbB2 K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SDY_0905 conserved hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D SDY_4099 yjdB; conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SDY_0545 hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D SDY_2453 conserved hypothetical protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SDY_2576 ddg; putative heat shock protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D SDY_0248 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SDY_3235 putative kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SDY_0219 yaeD; putative phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SDY_4051 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D SDY_4053 rfaC; heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SDY_4052 rfaF; ADP-heptose--lps heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SDY_4060 waaP; putative LPS biosynthesis enzyme K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D SDY_3790 yijP; conserved hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D SDY_4062 waaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D SDY_P108 rfbU; UDP-sugar hydrolase K23160 wabB; GlcNAc transferase
D SDY_4048 yibD; putative regulator K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D SDY_4057 rfaY; Lipopolysaccharide core biosynthesis protein rfaY K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D SDY_4061 rfaG; glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SDY_4059 rfaI; Lipopolysaccharide 1,3-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SDY_4058 rfaJ; Lipopolysaccharide 1,2-glucosyltransferase K03276 waaR; UDP-glucose/galactose:(glucosyl)LPS alpha-1,2-glucosyl/galactosyltransferase [EC:2.4.1.-]
D SDY_4056 waaW; UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-]
D SDY_4055 waaX; putative beta1,4-galactosyltransferase WaaX K23067 waaX; beta-1,4-galactosyltransferase
D SDY_4054 waaL; lipid A-core:surface polymer ligase WaaL K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:sdy00542]
D SDY_3964 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sdy00541]
D SDY_1288 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_2203 galF; probable UDP-gal transferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SDY_0706 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SDY_2213 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SDY_2206 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_3959 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_2204 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SDY_2207 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SDY_2205 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SDY_3957 wecE; putative regulator K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D SDY_3958 wecD; conserved hypothetical protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D SDY_1829 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SDY_4018 glmU; N-acetyl glucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SDY_3962 wecB; UDP-N-acetyl glucosamine -2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SDY_3961 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:sdy00550]
D SDY_3370 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDY_3756 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SDY_0121 murC; UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SDY_0118 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SDY_0115 murE; meso-diaminopimelate-adding enzyme K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SDY_0122 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_0365 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_0116 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SDY_0190 yaeS; conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SDY_0843 ybjG; conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDY_0117 mraY; possible phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SDY_0120 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SDY_3389 mtgA; putative peptidoglycan enzyme K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SDY_3682 mrcA; peptidoglycan synthetase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDY_0165 mrcB; peptidoglycan synthetase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SDY_0557 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SDY_0114 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SDY_2233 dacD; penicillin binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_0841 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_0554 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_3363 dacB; D-alanyl-D-alanine carboxypeptidase, fraction B K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:sdy00552]
D SDY_0843 ybjG; conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDY_3964 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:sdy00543]
D SDY_3964 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SDY_3953 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D SDY_3955 yifM; Uncharacterized conserved protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D SDY_4040 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SDY_0749 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sdy00730]
D SDY_3732 thiC; thiamin biosynthesis, pyrimidine moiety K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SDY_2277 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SDY_3734 thiF; thiamin biosynthesis, thiazole moiety K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D SDY_2726 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDY_0307 yajK; putative oxidoreductase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SDY_3737 thiH; thiamin biosynthesis, thiazole moiety K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D SDY_0310 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SDY_3736 thiG; thiamin biosynthesis, thiazole moiety K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SDY_2278 thiM; hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SDY_3733 thiE; thiamin biosynthesis, thiazole moiety K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SDY_0317 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SDY_4431 yjeQ; conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SDY_2044 ycfN; putative beta-glucosidase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D SDY_0445 adk; Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sdy00740]
D SDY_1353 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SDY_0320 ribD; bifunctional pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SDY_3933 yigB; putative phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D SDY_3226 ribB; 3,4 dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D SDY_0319 ribH; riboflavin synthase, beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SDY_1888 ribE; riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SDY_0047 ribF; putative regulator K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SDY_0956 appA; phosphoanhydride phosphorylase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D SDY_P067 phoN1; PhoN1 K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SDY_P004 phoN2_apy; PhoN2/Apy K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SDY_3901 ubiB; ferrisiderophore reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D SDY_2319 ycbP; conserved hypothetical protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SDY_2278 thiM; hydoxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SDY_3206 yqiE; conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SDY_2018 putative phosphohydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D SDY_2510 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SDY_2938 phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:sdy00750]
D SDY_1861 pdxH; pyridoxinephosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SDY_2615 pdxK; pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SDY_1859 pdxY; pyridoxal kinase 2 / pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SDY_3155 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D SDY_2519 pdxB; erythronate-4-phosphate dehyrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D SDY_2354 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SDY_0077 pdxA; pyridoxine biosynthesis K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SDY_2805 pdxJ; pyridoxine biosynthesis K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D SDY_0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sdy00760]
D SDY_2815 nadB; quinolinate synthetase, B protein K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SDY_0694 nadA; quinolinate synthetase, A protein K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SDY_0139 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SDY_2326 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SDY_4644 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SDY_4651 nadR; probable nadAB transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SDY_P064 ushA; UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SDY_0438 ushA; UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SDY_2943 surE; survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SDY_0609 nagD; N-acetylglucosamine metabolism K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SDY_0561 ybeN; conserved hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SDY_2998 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SDY_3730 yjaD; conserved hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D SDY_1540 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SDY_2896 ygaD; conserved hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SDY_1505 ydjB; conserved hypothetical protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D SDY_2030 cobB; putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SDY_2788 yfjB; conserved hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SDY_3797 udhA; putative oxidoreductase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D SDY_1550 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SDY_1551 pntB; pyridine nucleotide transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D SDY_1632 putative aldehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:sdy00770]
D SDY_3980 ilvG; Acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0107 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_4155 ilvB; acetolactate synthase I,valine-sensitive, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SDY_0108 ilvH; acetolactate synthase III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_4154 ilvN; acetolactate synthase I, valine sensitive, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SDY_3979 ilvM; acetolactate synthase II, valine insensitive, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SDY_3974 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SDY_3977 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SDY_0154 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SDY_0305 apbA; ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SDY_0155 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SDY_3754 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SDY_4069 dfp; Dfp K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SDY_2998 mazG; conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SDY_4064 kdtB; putative enzyme of LPS biosynthesis K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SDY_0133 yacE; putative DNA repair protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SDY_2804 acpS; CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SDY_3630 yhhU; conserved hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D SDY_3978 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDY_2140 putative oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D SDY_0041 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:sdy00780]
D SDY_0829 bioC; biotin biosynthesis protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D SDY_2522 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SDY_2055 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDY_3629 putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDY_2057 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDY_0196 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SDY_1368 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SDY_3663 bioH; biotin biosynthesis; reaction prior to pimeloyl CoA K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D SDY_0830 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SDY_0832 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SDY_1563 conserved hypothetical protein K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SDY_0828 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SDY_0831 bioB; biotin synthesis K01012 bioB; biotin synthase [EC:2.8.1.6]
D SDY_3755 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SDY_4352 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:sdy00785]
D SDY_0552 lipB; protein of lipoate biosynthesis K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SDY_0550 lipA; lipoate synthesis K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SDY_4647 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_0144 aceE; pyruvate dehydrogenase decarboxylase component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SDY_0145 aceF; pyruvate dehydrogenase dihydrolipoyltransacetylase component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SDY_0664 sucA; 2-oxoglutarate dehydrogenase, decarboxylase component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SDY_0665 sucB; 2-oxoglutarate dehydrogenase, dihydrolipoyltranssuccinase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SDY_3178 gcvP; glycine decarboxylase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SDY_3176 gcvT; aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SDY_3177 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:sdy00790]
D SDY_2127 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SDY_1152 ntpA; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D SDY_3241 ygiG; putative kinase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SDY_0158 folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SDY_3358 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SDY_0071 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SDY_2514 folC; dihydrofolate:folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SDY_1353 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SDY_3522 pabA; p-aminobenzoate synthetase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D SDY_1718 pabB; p-aminobenzoate synthetase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D SDY_2054 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D SDY_2500 folX; D-erythro-7,8-dihydroneopterin tri P epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D SDY_1547 ydgB; putative oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D SDY_2967 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SDY_2981 ygcF; conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SDY_0286 ybaX; conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SDY_3011 yqcD; conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SDY_0825 moaA; molybdopterin biosynthesis, protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SDY_0823 moaC; molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SDY_0821 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SDY_0009 mog; Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SDY_0824 moaB; molybdopterin biosynthesis, protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SDY_0760 moeA; molybdopterin biosynthesis K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SDY_3888 mobA; MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:sdy00670]
D SDY_0071 folA; dihydrofolate reductase type I K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SDY_1547 ydgB; putative oxidoreductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D SDY_0281 folD; 5,10-methylene-tetrahydrofolate dehydrogenase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SDY_2741 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SDY_2689 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SDY_3720 purH; phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SDY_3464 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SDY_3176 gcvT; aminomethyltransferase of glycine cleavage system K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SDY_4322 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SDY_3044 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SDY_1284 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SDY_3776 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SDY_3170 ygfA; putative ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:sdy00860]
D SDY_2600 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SDY_1259 hemA; 5-aminolevulinate synthesis enzyme, alternate pathway K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SDY_0170 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SDY_0501 hemB; 5-aminolevulinate dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SDY_3941 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SDY_3942 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SDY_3729 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SDY_2634 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SDY_3876 hemN; O2-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D SDY_3895 hemG; protoporphyrin oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D SDY_0444 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SDY_3943 hemX; uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SDY_3530 cysG; uroporphyrinogen III methylase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D SDY_1340 btuR; cob(I)alamin adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SDY_2240 cobU; cobinamide kinase/cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D SDY_2241 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D SDY_2242 cobT; nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D SDY_3498 bfr; bacterioferrin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sdy00130]
D SDY_4535 ubiC; chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D SDY_4534 ubiA; 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SDY_3902 yigC; putative oxidoreductase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D SDY_2510 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SDY_2938 phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SDY_3175 visC; conserved hypothetical protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D SDY_2424 ubiG; 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D SDY_3174 ubiH; UbiH K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D SDY_3910 ubiE; UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SDY_0598 yleB; conserved hypothetical protein K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D SDY_2461 menF; isochorismate hydroxymutase 2, menaquinone biosynthesis K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D SDY_0524 entC; isochorismate hydroxymutase 2 K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SDY_2460 menD; 2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D SDY_2459 yfbB; putative enzyme K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D SDY_2457 menC; o-succinylbenzoyl-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D SDY_2456 menE; o-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D SDY_2458 menB; dihydroxynaphtoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D SDY_1674 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D SDY_3807 menA; MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SDY_0980 wrbA; trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SDY_4382 ytfG; putative oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sdy00900]
D SDY_0310 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SDY_0189 yaeM; putative ATP-binding component of a transport system K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SDY_2946 ygbP; conserved hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SDY_1257 ychB; conserved hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SDY_2945 ygbB; conserved hypothetical protein K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SDY_2711 gcpE; conserved hypothetical protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SDY_0051 lytB; control of stringent response K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SDY_2510 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SDY_2938 phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SDY_3193 putative enzyme K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SDY_0309 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SDY_3368 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SDY_0190 yaeS; conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:sdy00907]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SDY_4288 yjgB; putative oxidoreductase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D SDY_2543 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_3900 fadA; thiolase I K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SDY_3141 tktA; transketolase 1 isozyme K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:sdy00523]
D SDY_2206 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_3959 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_2204 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SDY_2207 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SDY_2205 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:sdy01053]
D SDY_2461 menF; isochorismate hydroxymutase 2, menaquinone biosynthesis K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D SDY_0524 entC; isochorismate hydroxymutase 2 K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SDY_0526 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D SDY_0527 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D SDY_0511 entD; enterochelin synthetase, component D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D SDY_0525 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SDY_0515 entF; ATP-dependent serine activating enzyme K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D SDY_0528 ybdB; conserved hypothetical protein K24147 entH; proofreading thioesterase EntH
C 01055 Biosynthesis of vancomycin group antibiotics
D SDY_2204 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:sdy00946]
D SDY_2156 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:sdy00332]
D SDY_0474 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SDY_0473 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:sdy00261]
D SDY_2950 cysN; ATP-sulfurylase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SDY_2951 cysD; ATP-sulfurylase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SDY_4227 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SDY_0002 thrA; aspartokinase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SDY_3775 metL; aspartokinase II and homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SDY_3579 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SDY_2667 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SDY_0053 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sdy00521]
D SDY_2587 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SDY_0628 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SDY_2729 suhB; SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SDY_2206 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_3959 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_2204 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SDY_2207 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SDY_2205 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SDY_2587 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:sdy00525]
D SDY_2206 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_3959 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SDY_2204 rfbB; dTDP-glucose 4,6 dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:sdy00401]
D SDY_2766 tyrA; chorismate mutase-T K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_2220 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SDY_4520 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SDY_1332 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SDY_2058 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SDY_2057 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDY_1368 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SDY_2056 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SDY_P162 acp; Acp K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:sdy00999]
D SDY_3130 metK; methionine adenosyltransferase 1 K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SDY_3458 aroE; dehydroshikimate reductase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SDY_2156 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:sdy00362]
D SDY_2543 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_3900 fadA; thiolase I K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_2721 fdx; [2FE-2S] ferredoxin, electron carrer protein K04755 fdx; ferredoxin, 2Fe-2S
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:sdy00627]
D SDY_0943 conserved hypothetical protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SDY_2937 conserved hypothetical protein K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61]
D SDY_2936 conserved hypothetical protein K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61]
D SDY_2510 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SDY_2938 phenylacrylic acid decarboxylase-like protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:sdy00364]
D SDY_3913 putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:sdy00625]
D SDY_1608 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDY_1295 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase/pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sdy00361]
D SDY_3913 putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:sdy00623]
D SDY_3913 putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:sdy00633]
D SDY_0744 mdaA; modulator of drug activity A K10678 nfsA; nitroreductase [EC:1.-.-.-]
D SDY_0491 nfnB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D SDY_1876 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D SDY_3079 hybC; probable large subunit, hydrogenase-2 K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D SDY_0948 hyaB; hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D SDY_0947 hyaA; hydrogenase-1 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D SDY_3076 putative hydrogenase subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D SDY_2543 putative acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SDY_3900 fadA; thiolase I K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:sdy00930]
D SDY_3899 fadB; 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SDY_2542 putative enzyme K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:sdy00626]
D SDY_1608 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SDY_1295 adhE; CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase/pyruvate-formate-lyase deactivase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sdy03020]
D SDY_3741 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDY_3740 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDY_3471 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDY_4081 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sdy03010]
D SDY_2347 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SDY_0185 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SDY_3490 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SDY_3472 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SDY_3479 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SDY_4369 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SDY_3502 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SDY_3482 rpsH; 30S ribosomal subunit protein S8, and regulator K02994 RP-S8; small subunit ribosomal protein S8
D SDY_3406 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SDY_3497 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SDY_3473 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SDY_3503 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SDY_3474 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SDY_3483 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SDY_3344 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SDY_2783 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SDY_3487 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SDY_4371 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SDY_3492 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SDY_0045 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SDY_3249 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SDY_3744 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SDY_3493 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SDY_3496 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SDY_3495 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SDY_3484 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SDY_3481 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SDY_3742 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SDY_4372 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SDY_3743 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SDY_3745 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SDY_3407 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SDY_3486 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SDY_3477 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SDY_3489 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SDY_3470 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SDY_3480 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SDY_2780 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SDY_1811 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SDY_3367 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SDY_3491 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SDY_3494 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SDY_3485 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SDY_0894 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SDY_3366 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SDY_4067 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SDY_3488 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SDY_3478 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SDY_3801 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SDY_2061 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SDY_4066 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDY_4185 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SDY_1812 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D SDY_3475 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SDY_0220 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3991 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3760 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_2834 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3894 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3719 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3455 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_0223 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3717 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3452 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3758 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_2832 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3989 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3891 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_0224 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3988 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_2831 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3716 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3890 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3757 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3451 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3449 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sdy00970]
D SDY_2595 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_0222 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_3453 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_3892 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_0259 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_0575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_1995 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_1438 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_3951 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2552 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2888 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2889 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_1073 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_2250 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_2244 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_2247 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_0225 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDY_3987 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDY_0235 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDY_1108 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SDY_0603 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDY_0605 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDY_0600 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDY_2833 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_3759 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_3990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_3718 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_1997 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_3750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_0573 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_1107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_4427 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_4429 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_4428 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_3950 tRNA-His K14226 tRNA-His; tRNA His
D SDY_0221 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDY_3454 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDY_3893 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDY_3355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4289 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_0606 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_3949 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4627 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4629 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4628 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_1109 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4471 pseudogene K14228 tRNA-Leu; tRNA Leu
D SDY_0691 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_0692 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_0693 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_2603 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_0576 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_1994 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_1437 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_0602 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_0607 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3253 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3032 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3033 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3350 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3103 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDY_4439 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDY_4568 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDY_0890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDY_3948 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDY_2891 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_1071 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_0946 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_1005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_2378 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_3749 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_3450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_3752 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_1996 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_0574 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_0472 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_3986 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SDY_1283 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDY_3751 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDY_2601 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_2602 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_1892 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_1893 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_4579 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D SDY_2600 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SDY_0614 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SDY_2893 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDY_1153 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDY_2327 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDY_4344 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SDY_4345 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SDY_1814 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDY_2368 serS; serine tRNA synthetase; also charges selenocystein tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDY_4212 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SDY_0278 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDY_2181 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDY_3464 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SDY_4282 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDY_0564 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDY_0048 ileS; isoleucine tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDY_3192 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDY_1180 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDY_0213 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDY_2710 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDY_1809 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDY_1808 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDY_1860 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDY_3695 trpS; tryptophan tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sdy03060]
D SDY_3476 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D SDY_3747 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D SDY_3356 secG; protein export - membrane protein K03075 secG; preprotein translocase subunit SecG
D SDY_0326 secD; SecD K03072 secD; preprotein translocase subunit SecD
D SDY_0325 secF; protein secretion, membrane protein K03074 secF; preprotein translocase subunit SecF
D SDY_0327 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SDY_4188 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDY_0128 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDY_4042 secB; SecB K03071 secB; preprotein translocase subunit SecB
D SDY_0127 yacA; conserved hypothetical protein K13301 secM; secretion monitor
D SDY_2784 ffh; GTP-binding export factor K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDY_3615 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D SDY_3907 conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D SDY_3906 conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D SDY_3905 yigU; conserved hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D SDY_0549 ybeC; conserved hypothetical protein K03425 tatE; sec-independent protein translocase protein TatE
D SDY_2809 lepB; leader peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SDY_0049 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sdy04122]
D SDY_2726 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDY_2717 sseA; putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SDY_3621 yhhP; conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SDY_3504 yheL; conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SDY_3505 yheM; conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SDY_3506 yheN; conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SDY_0944 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SDY_2019 ycfB; conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SDY_0821 moaE; molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SDY_0825 moaA; molybdopterin biosynthesis, protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SDY_0822 moaD; molybdopterin biosynthesis K03636 moaD; sulfur-carrier protein
D SDY_0761 moeB; molybdopterin biosynthesis K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SDY_0823 moaC; molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SDY_0009 mog; Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SDY_0824 moaB; molybdopterin biosynthesis, protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SDY_0307 yajK; putative oxidoreductase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SDY_3735 thiS; Sulfur transfer protein involved in thiamine biosynthesis K03154 thiS; sulfur carrier protein
D SDY_3734 thiF; thiamin biosynthesis, thiazole moiety K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sdy03018]
D SDY_3047 ygdP; putative invasion protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SDY_2067 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SDY_3969 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SDY_2996 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDY_3343 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SDY_0806 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SDY_4410 vacB; putative enzyme K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDY_3341 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SDY_3921 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_3586 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_3582 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_3966 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_0013 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SDY_4449 mopA; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDY_4417 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D SDY_2690 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SDY_0159 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sdy03030]
D SDY_1128 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SDY_0234 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDY_0200 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDY_2051 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDY_0562 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDY_4631 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SDY_4283 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SDY_4183 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDY_4522 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDY_3250 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SDY_4508 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDY_0233 rnhA; RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SDY_0199 rnhB; RNAse HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SDY_3879 polA; PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDY_2608 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sdy03410]
D SDY_1856 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SDY_2823 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SDY_3111 mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SDY_4065 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SDY_0649 nei; endonuclease VIII and DNA N-glycosylase with an AP lyase activity K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SDY_2194 alkA; 3-methyl-adenine DNA glycosylase II, inducible K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SDY_4353 tag; 3-methyl-adenine DNA glycosylase I, constitutive K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SDY_3252 ygjF; conserved hypothetical protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D SDY_1527 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SDY_2107 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SDY_3879 polA; PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDY_3190 recJ; ssDNA exonuclease, 5' --> 3' specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDY_2608 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sdy03420]
D SDY_2036 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SDY_4509 uvrA; excision nuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D SDY_0827 uvrB; excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B
D SDY_1105 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D SDY_3932 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDY_3879 polA; PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDY_2608 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sdy03430]
D SDY_2933 mutS; methyl-directed mismatch repair K03555 mutS; DNA mismatch repair protein MutS
D SDY_4419 mutL; MutL K03572 mutL; DNA mismatch repair protein MutL
D SDY_3048 mutH; methyl-directed mismatch repair K03573 mutH; DNA mismatch repair protein MutH
D SDY_3932 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDY_2231 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SDY_2705 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SDY_0308 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SDY_1130 conserved hypothetical protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D SDY_3190 recJ; ssDNA exonuclease, 5' --> 3' specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDY_4508 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDY_0200 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDY_4183 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDY_0562 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDY_2051 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDY_0234 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDY_1128 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SDY_4283 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SDY_4631 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SDY_2608 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDY_3692 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:sdy03440]
D SDY_3190 recJ; ssDNA exonuclease, 5' --> 3' specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDY_4508 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDY_4182 recF; ssDNA and dsDNA binding, ATP binding K03629 recF; DNA replication and repair protein RecF
D SDY_2806 recO; RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SDY_0447 recR; recombination and repair protein K06187 recR; recombination protein RecR
D SDY_2895 recA; DNA-dependent ATPase, DNA- and ATP-dependent coprotease K03553 recA; recombination protein RecA
D SDY_3879 polA; PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDY_1148 ruvA; Holliday junction helicase subunit B K03550 ruvA; holliday junction DNA helicase RuvA
D SDY_1147 ruvB; Holliday junction helicase subunit A K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SDY_1150 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SDY_4084 recG; DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SDY_3037 recB; ATP-dependent dsDNA/ssDNA exonuclease V subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SDY_3039 recC; ATP-dependent dsDNA/ssDNA exonuclease V subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SDY_3036 recD; ATP-dependent dsDNA/ssDNA exonuclease V subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SDY_0200 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDY_4183 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDY_0562 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDY_2051 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDY_0234 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDY_1128 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SDY_4283 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SDY_4631 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SDY_3802 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SDY_4370 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D SDY_0452 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
D SDY_4616 dnaT; DNA biosynthesis K02317 dnaT; DNA replication protein DnaT
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:sdy03250]
D SDY_3525 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sdy02010]
D SDY_2621 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SDY_3830 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SDY_2620 cysU; sulfate, thiosulfate transport system permease T protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D SDY_2619 cysW; ABC-type sulfate transport system, permease component K02047 cysW; sulfate/thiosulfate transport system permease protein
D SDY_2618 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SDY_0505 tauA; taurine transport system periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D SDY_0503 tauC; taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D SDY_0504 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D SDY_2320 ycbO; conserved hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SDY_2323 ycbM; putative transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D SDY_2324 ycbE; putative ATP-binding component of a transport system K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SDY_0710 modA; molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D SDY_0711 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein
D SDY_0712 modC; ATP-binding component of molybdate transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SDY_0707 modF; ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D SDY_0095 tbpA; thiamin-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D SDY_0094 yabK; putative transport system permease protein K02063 thiP; thiamine transport system permease protein
D SDY_0093 yabJ; putative ATP-binding component of a transport system K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D SDY_2029 potD; spermidine/putrescine periplasmic transport protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SDY_2028 potC; spermidine/putrescine transport system permease K11070 potC; spermidine/putrescine transport system permease protein
D SDY_2027 potB; spermidine/putrescine transport system permease K11071 potB; spermidine/putrescine transport system permease protein
D SDY_2026 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SDY_0741 potF; periplasmic putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D SDY_0738 potI; putrescine transport protein K11074 potI; putrescine transport system permease protein
D SDY_0739 potH; putrescine transport protein K11075 potH; putrescine transport system permease protein
D SDY_0740 potG; ATP-binding component of putrescine transport system K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SDY_2873 proW; high-affinity transport system for glycine betaine and proline K02001 proW; glycine betaine/proline transport system permease protein
D SDY_2872 proV; ATP-binding component of transport system for glycine, betaine and proline K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SDY_2157 yehZ; putative transport system permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SDY_2160 yehW; putative transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SDY_3373 yrbC; conserved hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SDY_3374 yrbD; conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SDY_3375 yrbE; conserved hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SDY_3372 yrbB; conserved hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D SDY_3376 yrbF; putative ATP-binding component of a transport system K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SDY_4130 putative periplasmic ribose-binding protein of ABC transport system K10439 rbsB; ribose transport system substrate-binding protein
D SDY_3997 rbsC; D-ribose high-affinity transport system K10440 rbsC; ribose transport system permease protein
D SDY_4128 putative ATP-binding protein of ribose ABC transport system K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SDY_1120 araF; L-arabinose-binding periplasmic protein K10537 araF; L-arabinose transport system substrate-binding protein
D SDY_1122 araH; ABC-type arabinose transport system, permease component K10538 araH; L-arabinose transport system permease protein
D SDY_1121 araG; ATP-binding component of high-affinity L-arabinose transport system K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D SDY_4249 yjfF; putative transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D SDY_4248 ytfT; putative transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D SDY_4247 ytfR; putative ATP-binding component of a transport system K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D SDY_2130 mglB; galactose-binding transport protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D SDY_2137 mglC; methyl-galactoside transport and galactose taxis K10541 mglC; methyl-galactoside transport system permease protein
D SDY_3601 ugpB; sn-glycerol 3-phosphate transport system; periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SDY_3600 ugpA; sn-glycerol 3-phosphate transport system, integral membrane protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D SDY_3599 ugpE; sn-glycerol 3-phosphate transport protein, integral membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SDY_4022 pstS; high-affinity phosphate-specific transport system K02040 pstS; phosphate transport system substrate-binding protein
D SDY_4023 pstC; high-affinity phosphate-specific transport system, cytoplasmic membrane component K02037 pstC; phosphate transport system permease protein
D SDY_4024 pstA; high-affinity phosphate-specific transport system K02038 pstA; phosphate transport system permease protein
D SDY_4025 pstB; ATP-binding component of high-affinity phosphate-specific transport system K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDY_4112 phnD; periplasmic binding protein component of Pn transporter K02044 phnD; phosphonate transport system substrate-binding protein
D SDY_4113 phnE; membrane channel protein component of Pn transporter K02042 phnE; phosphonate transport system permease protein
D SDY_4111 phnC; ATP-binding component of phosphonate transport K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SDY_2509 argT; lysine-, arginine-, ornithine-binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D SDY_2506 hisM; histidine transport, membrane protein M K10015 hisM; histidine transport system permease protein
D SDY_2507 hisQ; histidine transport system permease protein K10016 hisQ; histidine transport system permease protein
D SDY_2505 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_2508 hisJ; histidine-binding periplasmic protein of high-affinity histidine transport system K10014 hisJ; histidine transport system substrate-binding protein
D SDY_0785 glnH; periplasmic glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D SDY_0786 glnP; glutamine high-affinity transport system, membrane component K10037 glnP; glutamine transport system permease protein
D SDY_0787 glnQ; ATP-binding component of glutamine high-affinity transport system K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_2405 artI; arginine 3rd transport system periplasmic binding protein K09997 artI; arginine transport system substrate-binding protein
D SDY_2407 artM; arginine 3rd transport system permease protein K09998 artM; arginine transport system permease protein
D SDY_2406 artQ; arginine 3rd transport system permease protein K09999 artQ; arginine transport system permease protein
D SDY_2404 artP; ATP-binding component of 3rd arginine transport system K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_0592 ybeJ; putative periplasmic binding transport protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SDY_0588 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D SDY_3445 yhdW; putative periplasmic binding transport protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D SDY_3447 yhdY; putative transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D SDY_1097 fliY; putative periplasmic binding transport protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SDY_1099 yecS; putative transport system permease protein K10009 tcyB; L-cystine transport system permease protein
D SDY_1100 yecC; putative ATP-binding component of a transport system K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_3607 livK; high-affinity leucine-specific transport system; periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDY_3611 livJ; high-affinity amino acid transport system periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDY_3606 livH; high-affinity branched-chain amino acid transport system, membrane component K01997 livH; branched-chain amino acid transport system permease protein
D SDY_3605 livM; high-affinity branched-chain amino acid transport K01998 livM; branched-chain amino acid transport system permease protein
D SDY_3604 livG; ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SDY_3603 livF; ATP-binding component of leucine transport K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SDY_4499 nlpA; lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein
D SDY_0216 yaeC; putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SDY_0217 yaeE; putative transport system permease protein K02072 metI; D-methionine transport system permease protein
D SDY_0218 abc; ATP-binding component of a transporter K02071 metN; D-methionine transport system ATP-binding protein
D SDY_1409 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1301 oppA; OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1302 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D SDY_1303 oppC; OppC K15582 oppC; oligopeptide transport system permease protein
D SDY_1304 oppD; OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDY_1305 oppF; OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDY_4567 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D SDY_4566 dppB; dipeptide transport system permease protein 1 K12369 dppB; dipeptide transport system permease protein
D SDY_4565 dppC; dipeptide transport system permease protein 2 K12370 dppC; dipeptide transport system permease protein
D SDY_4564 dppD; putative ATP-binding component of dipeptide transport system K12371 dppD; dipeptide transport system ATP-binding protein
D SDY_4563 dppF; putative ATP-binding component of dipeptide transport system K12372 dppF; dipeptide transport system ATP-binding protein
D SDY_1638 sapA; SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D SDY_1639 sapB; SapB K19227 sapB; cationic peptide transport system permease protein
D SDY_1379 sapC; SapC K19228 sapC; cationic peptide transport system permease protein
D SDY_1378 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D SDY_1377 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D SDY_3631 nikA; periplasmic binding protein for nickel K15584 nikA; nickel transport system substrate-binding protein
D SDY_3632 nikB; transport of nickel membrane protein K15585 nikB; nickel transport system permease protein
D SDY_3633 nikC; transport of nickel membrane protein K15586 nikC; nickel transport system permease protein
D SDY_3634 nikD; ATP-binding protein of nickel transport system K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D SDY_3635 nikE; ATP-binding protein of nickel transport system K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D SDY_0757 putative transport protein K13889 gsiB; glutathione transport system substrate-binding protein
D SDY_0756 putative transport system permease protein K13890 gsiC; glutathione transport system permease protein
D SDY_0755 putative transport system permease protein K13891 gsiD; glutathione transport system permease protein
D SDY_0758 putative ATP-binding component of a transport system K13892 gsiA; glutathione transport system ATP-binding protein
D SDY_0902 yejA; conserved hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D SDY_0901 yejB; putative transport system permease protein K13894 yejB; microcin C transport system permease protein
D SDY_0900 yejE; putative transport system permease protein K13895 yejE; microcin C transport system permease protein
D SDY_0899 yejF; putative ATP-binding component of a transport system K13896 yejF; microcin C transport system ATP-binding protein
D SDY_4294 fecD; citrate-dependent iron transporter membrane-bound protein K23182 fecD; ferric citrate transport system permease protein
D SDY_4295 fecC; citrate-dependent iron(III) transport protein cytosolic K23183 fecC; ferric citrate transport system permease protein
D SDY_4293 fecE; ATP-binding component of citrate-dependent iron(III) transport protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D SDY_0523 fepB; ferric enterobactin binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D SDY_0521 fepD; ferric enterobactin transport K23186 fepD; iron-siderophore transport system permease protein
D SDY_0520 fepG; ferric enterobactin transport protein K23187 fepG; iron-siderophore transport system permease protein
D SDY_0519 fepC; ATP-binding component of ferric enterobactin transport K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D SDY_0168 fhuD; hydroxamate-dependent iron uptake, cytoplasmic membrane component K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D SDY_0169 fhuB; hydroxamate-dependent iron uptake, cytoplasmic membrane component K23228 fhuB; ferric hydroxamate transport system permease protein
D SDY_0167 fhuC; ATP-binding component of hydroxymate-dependent iron transport K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D SDY_0174 yadT; conserved hypothetical protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D SDY_1806 btuC; vitamin B12 transport permease protein K06073 btuC; vitamin B12 transport system permease protein
D SDY_1804 btuD; ATP-binding component of vitamin B12 transport system K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D SDY_1144 yebL; putative adhesin K09815 znuA; zinc transport system substrate-binding protein
D SDY_1146 yebI; conserved hypothetical protein K09816 znuB; zinc transport system permease protein
D SDY_1145 yebM; putative ATP-binding component of a transport system K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SDY_1457 sitA; Iron transport protein, periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D SDY_1455 sitC; iron transport protein, inner membrane component K11605 sitC; manganese/iron transport system permease protein
D SDY_1454 sitD; Iron transport protein, inner membrane component K11606 sitD; manganese/iron transport system permease protein
D SDY_1456 sitB; Iron transport protein, ATP-binding component K11607 sitB; manganese/iron transport system ATP-binding protein
D SDY_3152 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D SDY_3150 hypothetical protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDY_3151 putative ATP-binding protein of ABC transport system K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDY_3149 putative ATP-binding protein of ABC transport system K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDY_2034 ycfU; conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SDY_2032 ycfW; putative kinase K09808 lolC_E; lipoprotein-releasing system permease protein
D SDY_2033 ycfV; putative ATP-binding component of a transport system K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SDY_0880 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D SDY_0879 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D SDY_0878 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D SDY_0877 ccmA; ATP binding protein of heme exporter A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SDY_4285 yjgP; conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D SDY_4286 yjgQ; conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D SDY_3382 yhbG; putative ATP-binding component of a transport system K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SDY_3613 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein
D SDY_3614 ftsE; ATP-binding component of a membrane-associated complex involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D SDY_2344 msbA; ATP-binding transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SDY_0385 mdlA; ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDY_0386 mdlB; putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDY_1025 iroC; putative ABC transporter protein K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
D SDY_0417 putative cytoplasmic membrane export protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D SDY_2375 cydC; ATP-binding component of cytochrome-related transport K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SDY_2374 cydD; ATP-binding component of cytochrome-related transport, Zn sensitive K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SDY_2382 ybjZ; putative ATP-binding component of a transport system K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SDY_0865 yojI; putative ATP-binding component of a transport system K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:sdy02060]
D SDY_2613 ptsI; PEP-protein phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SDY_2612 ptsH; PTS system protein HPr K02784 ptsH; phosphocarrier protein HPr
D SDY_2614 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDY_2049 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDY_0613 nagE; PTS system, N-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SDY_1842 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SDY_4259 treB; PTS system enzyme II, trehalose specific K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDY_2625 putative PTS enzyme II K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SDY_3143 cmtB; PTS system, mannitol-specific enzyme II component, cryptic K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SDY_3144 cmtA; PTS system, mannitol-specific enzyme II component, cryptic K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SDY_1963 manX; PTS enzyme IIAB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDY_1965 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
D SDY_4315 sorbose-permease PTS system IIC component K02814 sorA; sorbose PTS system EIIC component
D SDY_4316 PTS system, mannose-specific IID component K02815 sorM; sorbose PTS system EIID component
D SDY_2901 srlB; PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SDY_2898 srlA; PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SDY_3641 putative phosphotransferase system enzyme subunit K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SDY_2265 gatB; galactitol-specific enzyme IIB of phosphotransferase system K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDY_3642 putative phosphotransferase system enzyme IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDY_3643 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D SDY_4364 ptxA; putative PTS system enzyme II A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDY_4363 sgaB; conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDY_4362 sgaT; conserved hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component
D SDY_2317 fruB; PTS system, fructose-specific IIA/fpr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SDY_2315 fruA; PTS system, fructose-specific transport protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDY_2316 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SDY_3046 ptsP; PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SDY_3387 ptsO; phosphocarrier protein HPr-like NPr K08485 ptsO; phosphocarrier protein NPr
D SDY_3385 ptsN; phosphotransferase system enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:sdy03070]
D SDY_3205 tolC; outer membrane channel K12340 tolC; outer membrane protein
D SDY_P175 mxiH; MxiH K03221 yscF; type III secretion protein F
D SDY_P185 mxiA; MxiA K03230 yscV; type III secretion protein V
D SDY_P190 spa33; Spa33 K03225 yscQ; type III secretion protein Q
D SDY_3093 gspD; putative type II secretion protein K02453 gspD; general secretion pathway protein D
D SDY_3092 gspC; putative general secretion protein GspC K02452 gspC; general secretion pathway protein C
D SDY_3095 gspF; putative type II secretion protein K02455 gspF; general secretion pathway protein F
D SDY_3096 gspG; putative type II secretion protein K02456 gspG; general secretion pathway protein G
D SDY_3097 gspH; putative type II secretion protein K02457 gspH; general secretion pathway protein H
D SDY_3098 gspI; putative type II secretion protein K02458 gspI; general secretion pathway protein I
D SDY_3099 gspJ; putative type II secretion protein K02459 gspJ; general secretion pathway protein J
D SDY_3100 gspK; putative type II secretion protein K02460 gspK; general secretion pathway protein K
D SDY_3101 gspL; putative general secretion pathway for protein export (GSP) K02461 gspL; general secretion pathway protein L
D SDY_3102 gspM; putative secretion pathway protein K02462 gspM; general secretion pathway protein M
D SDY_3094 gspE; putative type II secretion protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SDY_0326 secD; SecD K03072 secD; preprotein translocase subunit SecD
D SDY_0325 secF; protein secretion, membrane protein K03074 secF; preprotein translocase subunit SecF
D SDY_3747 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D SDY_3356 secG; protein export - membrane protein K03075 secG; preprotein translocase subunit SecG
D SDY_3476 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D SDY_0327 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SDY_4188 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDY_0128 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDY_0127 yacA; conserved hypothetical protein K13301 secM; secretion monitor
D SDY_3615 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D SDY_4042 secB; SecB K03071 secB; preprotein translocase subunit SecB
D SDY_2784 ffh; GTP-binding export factor K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDY_3907 conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D SDY_3906 conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D SDY_3905 yigU; conserved hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D SDY_0549 ybeC; conserved hypothetical protein K03425 tatE; sec-independent protein translocase protein TatE
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sdy02020]
D SDY_0338 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SDY_4022 pstS; high-affinity phosphate-specific transport system K02040 pstS; phosphate transport system substrate-binding protein
D SDY_2023 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SDY_2022 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SDY_P067 phoN1; PhoN1 K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SDY_P004 phoN2_apy; PhoN2/Apy K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SDY_3672 envZ; protein histidine kinase/phosphatase sensor for OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SDY_3671 ompR; response regulator affecting transcription of ompC and ompF K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SDY_0861 ompC; outer membrane protein 1b K09475 ompC; outer membrane pore protein C
D SDY_2328 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D SDY_3835 cpxA; histidine protein kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SDY_3834 cpxR; transcriptional regulator in 2-component system K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SDY_3283 yqjB; conserved hypothetical protein K25864 mzrA; modulator protein MzrA
D SDY_1825 rstB; sensor histidine protein kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SDY_1824 rstA; response transcriptional regulatory protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D SDY_0178 htrA; periplasmic serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D SDY_4659 creB; catabolic regulation response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D SDY_2187 baeS; sensor protein for BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SDY_2186 baeR; transcriptional response regulatory protein K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SDY_2188 yegB; putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D SDY_2654 acrD; AcrD K18324 acrD; multidrug efflux pump
D SDY_4101 basS; sensor protein for basR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SDY_2449 hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SDY_3213 qseC; quorum sensing Escherichia coli regulator C K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SDY_3214 ygiX; putative 2-component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D SDY_1191 flhD; regulator of flagellar biosynthesis, acting on class 2 operons K02403 flhD; flagellar transcriptional activator FlhD
D SDY_1190 flhC; regulator of flagellar biosynthesis acting on class 2 operons K02402 flhC; flagellar transcriptional activator FlhC
D SDY_1095 fliA; alternative sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
D SDY_0485 putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D SDY_1189 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D SDY_0629 kdpE; regulator of kdp operon K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SDY_0631 kdpC; high-affinity potassium transport system K01548 kdpC; potassium-transporting ATPase KdpC subunit
D SDY_0634 kdpF; KdpF protein K01545 kdpF; potassium-transporting ATPase KdpF subunit
D SDY_0969 torR; response transcriptional regulator for torA K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D SDY_0972 torD; part of trimethylamine-N-oxide oxidoreductase K03533 torD; TorA specific chaperone
D SDY_3391 arcB; aerobic respiration sensor-response protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SDY_4662 arcA; negative response regulator of genes in aerobic pathways K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D SDY_4184 dnaA; DnaA K02313 dnaA; chromosomal replication initiator protein
D SDY_1022 iroN; TonB-dependent outer membrane siderophore receptor protein K19611 fepA; ferric enterobactin receptor
D SDY_0512 fepA; outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D K19611 fepA; ferric enterobactin receptor
D SDY_4238 yjdH; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D SDY_4237 yjdG; putative 2-component transcriptional regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D SDY_4232 dcuB; anaerobic dicarboxylate transport K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D SDY_1276 narX; nitrate/nitrate sensor K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SDY_1275 narL; NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D SDY_2653 narQ; sensor for nitrate reductase system K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D SDY_0885 narP; nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D SDY_1279 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1280 narH; nitrate reductase 1, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1651 narY; cryptic nitrate reductase 2, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1282 narI; nitrate reductase 1, cytochrome b(NR), gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1653 narV; cryptic nitrate reductase 2, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1281 narJ; nitrate reductase 1, delta subunit, assembly function K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D SDY_1652 narW; cryptic nitrate reductase 2, delta subunit, assembly function K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D SDY_1605 fdnH; formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D SDY_1606 fdnI; formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D SDY_4398 frdA; fumarate reductase, anaerobic, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SDY_4397 frdB; fumarate reductase, anaerobic, iron-sulfur protein subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SDY_4396 frdC; fumarate reductase, anaerobic K00246 frdC; succinate dehydrogenase subunit C
D SDY_4395 frdD; fumarate reductase, anaerobic K00247 frdD; succinate dehydrogenase subunit D
D SDY_4148 uhpC; regulator of uhpT K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D SDY_4149 uhpB; sensor histidine protein kinase phosphorylates UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D SDY_4150 uhpA; response regulator, positive activator of uhpT transcription K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D SDY_4147 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D SDY_0506 putative response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D SDY_0215 rcsF; regulator in colanic acid synthesis K06080 rcsF; RcsF protein
D SDY_0856 rcsC; sensor for ctr capsule biosynthesis K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SDY_0858 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D SDY_0857 rcsB; positive response regulator for colanic capsule biosynthesis K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SDY_3003 barA; sensor-regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SDY_1104 uvrY; putative 2-component transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SDY_2892 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D SDY_4478 evgS; putative sensor for regulator EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SDY_4477 evgA; putative positive transcription regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D SDY_2563 emrK; multidrug resistance protein K K07797 emrK; multidrug resistance protein K
D SDY_2562 emrY; multidrug resistance protein Y K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D SDY_1659 conserved hypothetical protein K23236 safA; two-component-system connector protein SafA
D SDY_4394 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SDY_0151 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_0912 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_4570 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_2287 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D SDY_0183 glnD; protein PII K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D SDY_2743 glnB; regulatory protein P-II for glutamine synthetase K04751 glnB; nitrogen regulatory protein P-II 1
D SDY_3874 glnL; histidine protein kinase sensor for GlnG regulator K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SDY_3875 glnG; response regulator for gln K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SDY_3873 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDY_3723 hydH; sensor kinase for HydG hydrogenase 3 activity K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D SDY_3722 hydG; sensor HydH response regulator of hydrogenase 3 activity K07713 zraR; two-component system, NtrC family, response regulator HydG
D SDY_3724 yjaI; conserved hypothetical protein K07803 zraP; zinc resistance-associated protein
D SDY_4548 dctA; uptake of C4-dicarboxylic acids K11103 dctA; aerobic C4-dicarboxylate transport protein
D SDY_3383 rpoN; RNA polymerase, sigma(54 or 60) factor K03092 rpoN; RNA polymerase sigma-54 factor
D SDY_2746 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SDY_2744 yfhA; putative 2-component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SDY_0947 hyaA; hydrogenase-1 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D SDY_3076 putative hydrogenase subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D SDY_3079 hybC; probable large subunit, hydrogenase-2 K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D SDY_0948 hyaB; hydrogenase-1 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D SDY_0949 hyaC; probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D SDY_1760 trg; methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D SDY_3256 aer; aerotaxis sensor receptor, flavoprotein K03776 aer; aerotaxis receptor
D SDY_0588 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D SDY_0592 ybeJ; putative periplasmic binding transport protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SDY_3519 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SDY_1631 yneH; putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SDY_0953 appC; probable third cytochrome oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SDY_0680 cydA; cytochrome d terminal oxidase, polypeptide subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SDY_0954 appB; probable third cytochrome oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SDY_0681 cydB; cytochrome d terminal oxidase polypeptide subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SDY_0682 ybgT; putative outer membrane lipoprotein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SDY_0955 yccB; Uncharacterized protein K22501 appX; cytochrome bd-II ubiquinol oxidase subunit AppX [EC:7.1.1.7]
D SDY_3205 tolC; outer membrane channel K12340 tolC; outer membrane protein
D SDY_0959 yccZ; putative function in exopolysaccharide production K01991 wza; polysaccharide biosynthesis/export protein
D SDY_0958 yccY; putative phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SDY_0957 yccC; conserved hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SDY_3962 wecB; UDP-N-acetyl glucosamine -2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SDY_3961 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SDY_4299 fecI; probable RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SDY_2081 flgM; anti-FliA factor K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D SDY_3107 speC; ornithine decarboxylase isozyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sdy02024]
D SDY_2884 ygaG; conserved hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SDY_4417 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D SDY_1332 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SDY_2211 rfbQ; rhamnosyl transferase I K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D SDY_2210 rfbR; rhamnosyl transferase II K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D SDY_1798 aroH; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SDY_0701 aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SDY_2765 aroF; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SDY_3213 qseC; quorum sensing Escherichia coli regulator C K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SDY_3214 ygiX; putative 2-component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D SDY_2746 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SDY_2744 yfhA; putative 2-component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SDY_1191 flhD; regulator of flagellar biosynthesis, acting on class 2 operons K02403 flhD; flagellar transcriptional activator FlhD
D SDY_1190 flhC; regulator of flagellar biosynthesis acting on class 2 operons K02402 flhC; flagellar transcriptional activator FlhC
D SDY_1389 stxA; Shiga toxin subunit A precursor K11006 stxA; shiga toxin subunit A
D SDY_1390 stxB; Shiga toxin subunit B precursor K11007 stxB; shiga toxin subunit B
D SDY_0629 kdpE; regulator of kdp operon K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SDY_0506 putative response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D SDY_1615 gadB; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_3532 gadA; glutamate decarboxylase isozyme K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D SDY_1614 xasA; acid sensitivity protein, putative transporter K20265 gadC; glutamate:GABA antiporter
D SDY_1623 yneB; conserved hypothetical protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D SDY_1624 conserved hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D SDY_1734 putative transport protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SDY_1733 putative ATP-binding component of a transport system K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SDY_3607 livK; high-affinity leucine-specific transport system; periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDY_3611 livJ; high-affinity amino acid transport system periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDY_3606 livH; high-affinity branched-chain amino acid transport system, membrane component K01997 livH; branched-chain amino acid transport system permease protein
D SDY_3605 livM; high-affinity branched-chain amino acid transport K01998 livM; branched-chain amino acid transport system permease protein
D SDY_3604 livG; ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SDY_3603 livF; ATP-binding component of leucine transport K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SDY_1709 fadD; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDY_3519 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SDY_4528 yjbK; putative regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SDY_1353 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SDY_0320 ribD; bifunctional pyrimidine deaminase/reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SDY_1726 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SDY_1409 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1301 oppA; OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1302 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D SDY_1303 oppC; OppC K15582 oppC; oligopeptide transport system permease protein
D SDY_1304 oppD; OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDY_1305 oppF; OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDY_3217 putative transport periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SDY_1611 putative ATP-binding component of a transport system K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SDY_4188 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDY_3747 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D SDY_3356 secG; protein export - membrane protein K03075 secG; preprotein translocase subunit SecG
D SDY_3476 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D SDY_0327 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SDY_0128 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDY_3615 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D SDY_4042 secB; SecB K03071 secB; preprotein translocase subunit SecB
D SDY_2784 ffh; GTP-binding export factor K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:sdy02030]
D SDY_1760 trg; methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D SDY_3256 aer; aerotaxis sensor receptor, flavoprotein K03776 aer; aerotaxis receptor
D SDY_4130 putative periplasmic ribose-binding protein of ABC transport system K10439 rbsB; ribose transport system substrate-binding protein
D SDY_2130 mglB; galactose-binding transport protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D SDY_4567 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D SDY_0485 putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D SDY_1189 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D SDY_0484 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:sdy02040]
D SDY_1183 flhE; flagellar protein K03516 flhE; flagellar protein FlhE
D SDY_2080 flgA; assembly of basal-body periplasmic P ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SDY_2078 flgB; cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D SDY_2077 flgC; cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D SDY_2076 flgD; initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D SDY_2075 flgE; hook protein K02390 flgE; flagellar hook protein FlgE
D SDY_2072 flgH; basal-body outer-membrane L ring protein K02393 flgH; flagellar L-ring protein FlgH
D SDY_2071 flgI; FlgI K02394 flgI; flagellar P-ring protein FlgI
D SDY_2070 flgJ; FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D SDY_2068 flgL; hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SDY_1091 fliD; filament capping protein K02407 fliD; flagellar hook-associated protein 2
D SDY_1090 fliS; repressor of class 3a and 3b operons K02422 fliS; flagellar secretion chaperone FliS
D SDY_0485 putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D SDY_1189 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D SDY_0484 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
D SDY_2081 flgM; anti-FliA factor K02398 flgM; negative regulator of flagellin synthesis FlgM
D SDY_1097 fliY; putative periplasmic binding transport protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SDY_1096 fliZ; conserved hypothetical protein K02425 fliZ; regulator of sigma S factor FliZ
D SDY_3251 rpoD; RNA polymerase, sigma(70) factor K03086 rpoD; RNA polymerase primary sigma factor
D SDY_1191 flhD; regulator of flagellar biosynthesis, acting on class 2 operons K02403 flhD; flagellar transcriptional activator FlhD
D SDY_1190 flhC; regulator of flagellar biosynthesis acting on class 2 operons K02402 flhC; flagellar transcriptional activator FlhC
D SDY_3383 rpoN; RNA polymerase, sigma(54 or 60) factor K03092 rpoN; RNA polymerase sigma-54 factor
D SDY_1095 fliA; alternative sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SDY_2996 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:sdy04980]
D SDY_3163 ygfD; putative nucleotide-binding protein K07588 MMAA; GTPase [EC:3.6.5.-]
D SDY_4322 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis [PATH:sdy05131]
D SDY_P166 ipaB; IpaB K13285 sipB; invasin B
D SDY_P165 ipaC; IpaC K13286 sipC; invasin C
D SDY_P164 ipaD; IpaD K13287 sipD; invasin D
D SDY_P163 ipaA; IpaA K13284 sipA; invasin A
D SDY_P046 ospE1; OspE1 K13793 ospE; secreted effector OspE
D SDY_P170 icsB; IcsB K13790 icsB; virulence protein IcsB
D SDY_P025 ipgB2; IpgB2 K13743 ipgB2; protein IpgB2
D SDY_P168 ipgB1; IpgB1 K13742 ipgB1; protein IpgB1
D SDY_P214 icsA; IcsA K12679 icsA; outer membrane protein IcsA
D SDY_P171 ipgD; IpgD K13085 ipgD; phosphatidylinositol-4,5-bisphosphate 4-phosphatase [EC:3.1.3.78]
D SDY_P211 virA; VirA K12785 espG; LEE-encoded effector EspG
D SDY_P082 conserved hypothetical protein K23827 ospI; glutamine deamidase
D SDY_P045 ipaH1.4; invasion plasmid antigen K23828 ipaH1.4_2.5; E3 ubiquitin-protein ligase IpaH1.4/2.5 [EC:2.3.2.27]
D SDY_P221 conserved hypothetical protein K23654 nleE; T3SS secreted effector NleE
D SDY_P099 ipaH9.8; invasion plasmid antigen K13791 ipaH9.8; invasion plasmid antigen
D SDY_P101 ospG; OspG K13792 ospG; secreted effector OspG
D SDY_P037 ipaH4.5; invasion plasmid antigen K23830 ipaH4.5; E3 ubiquitin-protein ligase IpaH4.5 [EC:2.3.2.27]
D SDY_0834 ipaH_1; invasion plasmid antigen K23831 ipaH0722; E3 ubiquitin-protein ligase IpaH0722 [EC:2.3.2.27]
D SDY_P160 ipaJ; IpaJ K23832 ipaJ; cysteine protease IpaJ [EC:3.4.22.-]
D SDY_P013 ospF; OspF, secreted by the Mxi-Spa secretion machinery K13450 ospF; phosphothreonine lyase [EC:4.2.3.-]
D SDY_P224 icsP; IcsP K13520 icsP; outer membrane protease [EC:3.4.23.-]
D SDY_P151 ospC3; OspC3 K23833 ospC; secreted effector OspC
D SDY_P070 ospC2; OspC2 K23833 ospC; secreted effector OspC
D SDY_P055 ospC1; OspC1 K23833 ospC; secreted effector OspC
D SDY_1389 stxA; Shiga toxin subunit A precursor K11006 stxA; shiga toxin subunit A
D SDY_1390 stxB; Shiga toxin subunit B precursor K11007 stxB; shiga toxin subunit B
D SDY_P176 mxiI; MxiI K22487 prgJ; type III secretion system protein
D SDY_P175 mxiH; MxiH K03221 yscF; type III secretion protein F
D SDY_P038 ipaH7.8; invasion plasmid antigen K23834 ipaH7.8; E3 ubiquitin-protein ligase IpaH7.8 [EC:2.3.2.27]
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells [PATH:sdy05100]
D SDY_1075 hypothetical protein K13735 yeeJ; adhesin/invasin
D SDY_4137 hypothetical protein K13735 yeeJ; adhesin/invasin
D SDY_P164 ipaD; IpaD K13287 sipD; invasin D
D SDY_P165 ipaC; IpaC K13286 sipC; invasin C
D SDY_P166 ipaB; IpaB K13285 sipB; invasin B
D SDY_P163 ipaA; IpaA K13284 sipA; invasin A
D SDY_P171 ipgD; IpgD K13085 ipgD; phosphatidylinositol-4,5-bisphosphate 4-phosphatase [EC:3.1.3.78]
D SDY_P168 ipgB1; IpgB1 K13742 ipgB1; protein IpgB1
D SDY_P025 ipgB2; IpgB2 K13743 ipgB2; protein IpgB2
D SDY_P211 virA; VirA K12785 espG; LEE-encoded effector EspG
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sdy01501]
D SDY_2328 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D SDY_0861 ompC; outer membrane protein 1b K09475 ompC; outer membrane pore protein C
D SDY_0300 ampG; regulates beta-lactamase synthesis K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SDY_2043 ycfO; conserved hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SDY_4394 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SDY_1409 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1301 oppA; OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1302 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D SDY_1303 oppC; OppC K15582 oppC; oligopeptide transport system permease protein
D SDY_1304 oppD; OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDY_1305 oppF; OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDY_0456 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SDY_0457 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D SDY_1372 putative multidrug-efflux transport protein K18138 acrB; multidrug efflux pump
D SDY_3205 tolC; outer membrane channel K12340 tolC; outer membrane protein
D SDY_3682 mrcA; peptidoglycan synthetase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDY_0557 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SDY_0114 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:sdy01502]
D SDY_0122 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_0365 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_4521 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D SDY_0116 murF; D-alanine:D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SDY_0117 mraY; possible phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SDY_0120 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sdy01503]
D SDY_2023 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SDY_2022 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SDY_0545 hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D SDY_2449 hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SDY_2450 putative sugar transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D SDY_2451 putative transformylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D SDY_2452 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D SDY_2453 conserved hypothetical protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SDY_2454 putative transport/receptor protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D SDY_2455 pmrD; polymyxin resistance protein B K19238 pmrD; signal transduction protein PmrD
D SDY_4101 basS; sensor protein for basR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SDY_4099 yjdB; conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SDY_1638 sapA; SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D SDY_1639 sapB; SapB K19227 sapB; cationic peptide transport system permease protein
D SDY_1379 sapC; SapC K19228 sapC; cationic peptide transport system permease protein
D SDY_1378 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D SDY_1377 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D SDY_0211 cutF; copper homeostasis protein K06079 cutF; copper homeostasis protein (lipoprotein)
D SDY_3835 cpxA; histidine protein kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SDY_3834 cpxR; transcriptional regulator in 2-component system K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SDY_4420 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_2633 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_3034 putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_2037 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D SDY_0178 htrA; periplasmic serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D SDY_3885 dsbA; protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SDY_3525 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SDY_1596 marA; MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SDY_0456 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SDY_0457 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D SDY_1372 putative multidrug-efflux transport protein K18138 acrB; multidrug efflux pump
D SDY_3205 tolC; outer membrane channel K12340 tolC; outer membrane protein
D SDY_0197 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sdy01000]
C 01001 Protein kinases [BR:sdy01001]
D SDY_0957 yccC; conserved hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SDY_2023 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SDY_3672 envZ; protein histidine kinase/phosphatase sensor for OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SDY_1825 rstB; sensor histidine protein kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SDY_3835 cpxA; histidine protein kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SDY_2187 baeS; sensor protein for BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SDY_4101 basS; sensor protein for basR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SDY_3213 qseC; quorum sensing Escherichia coli regulator C K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SDY_3391 arcB; aerobic respiration sensor-response protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SDY_1276 narX; nitrate/nitrate sensor K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SDY_2653 narQ; sensor for nitrate reductase system K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D SDY_4149 uhpB; sensor histidine protein kinase phosphorylates UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D SDY_0858 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D SDY_0856 rcsC; sensor for ctr capsule biosynthesis K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SDY_3003 barA; sensor-regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SDY_4478 evgS; putative sensor for regulator EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SDY_4238 yjdH; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D SDY_2163 yehU; putative 2-component sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SDY_2579 putative sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SDY_3874 glnL; histidine protein kinase sensor for GlnG regulator K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SDY_3723 hydH; sensor kinase for HydG hydrogenase 3 activity K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D SDY_2746 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sdy01009]
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_0446 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D SDY_4649 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:sdy01002]
D SDY_0049 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SDY_P224 icsP; IcsP K13520 icsP; outer membrane protease [EC:3.4.23.-]
D SDY_0950 hyaD; processor of HyaA and HyaB proteins K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D SDY_3080 hybD; probable processing element for hydrogenase-2 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D SDY_2914 hycI; HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D SDY_2703 guaA; GMP synthetase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SDY_0904 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SDY_1881 ydhO; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D SDY_1803 nlpC; lipoprotein K13695 nlpC; probable lipoprotein NlpC
D SDY_2511 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SDY_3393 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SDY_4019 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SDY_0608 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SDY_3332 yhbO; conserved hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124]
D SDY_0306 thiJ; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis K03152 thiJ; protein deglycase [EC:3.5.1.124]
D SDY_2243 erfK; conserved hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D SDY_1909 ynhG; conserved hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG
D SDY_0777 ybiS; conserved hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS
D SDY_2037 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D SDY_2332 ycbB; putative amidase K21470 ycbB; L,D-transpeptidase YcbB
D SDY_2325 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SDY_3564 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D SDY_1587 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D SDY_3038 ptr; protease III K01407 ptrA; protease III [EC:3.4.24.55]
D SDY_4284 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SDY_2719 pepB; putative peptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D SDY_2656 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SDY_2025 pepT; putative peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SDY_0480 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D SDY_1143 yebA; conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SDY_0184 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SDY_3898 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D SDY_3173 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SDY_2584 putative peptidase K08326 ypdF; aminopeptidase [EC:3.4.11.-]
D SDY_2952 iap; aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D SDY_3359 hflB; HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SDY_1977 htpX; heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SDY_2349 ycaL; putative heat shock protein K07387 K07387; metalloprotease [EC:3.4.24.-]
D SDY_3140 yggG; conserved hypothetical protein K07387 K07387; metalloprotease [EC:3.4.24.-]
D SDY_2683 conserved hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D SDY_0192 yaeL; conserved hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SDY_2527 mepA; murein DD-endopeptidase, penicillin-insensitive K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D SDY_1072 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D SDY_1555 conserved hypothetical protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D SDY_0178 htrA; periplasmic serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D SDY_3410 degQ; serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D SDY_3411 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D SDY_1131 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D SDY_2233 dacD; penicillin binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_0841 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_0554 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_2154 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SDY_0370 yaiH; putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D SDY_3363 dacB; D-alanyl-D-alanine carboxypeptidase, fraction B K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SDY_0295 clpP; ATP-dependent proteolytic subunit of clpA-clpP serine protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SDY_0293 lon; DNA-binding, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SDY_4531 lexA; regulator for SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D SDY_1220 umuD; UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SDY_2809 lepB; leader peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SDY_1978 prc; carboxy-terminal protease for penicillin-binding protein 3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SDY_1507 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D SDY_1342 sohB; putative protease K04774 sohB; serine protease SohB [EC:3.4.21.-]
D SDY_3651 glpG; protein of glp regulon K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D SDY_1232 conserved hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SDY_3805 hslV; heat shock protein hslVU, proteasome-related peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SDY_0759 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SDY_3595 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SDY_2259 yegQ; conserved hypothetical protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D SDY_1740 ydcP; putative collagenase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D SDY_3338 yhbV; conserved hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D SDY_3337 yhbU; putative collagenase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D SDY_4253 pmbA; PmbA K03592 pmbA; PmbA protein
D SDY_3420 tldD; CsrA inhibitory activity suppressor K03568 tldD; TldD protein
D SDY_0852 yfaSR; Large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin
D SDY_4414 hflC; protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC
D SDY_4415 hflK; protease specific for phage lambda cII repressor K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:sdy01003]
D SDY_3575 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SDY_4553 yhjO; putative cellulose synthase K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D SDY_3389 mtgA; putative peptidoglycan enzyme K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SDY_0165 mrcB; peptidoglycan synthetase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SDY_3682 mrcA; peptidoglycan synthetase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDY_3953 wecG; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D SDY_3955 yifM; Uncharacterized conserved protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D SDY_3964 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SDY_2301 mdoH; membrane glycosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D SDY_1193 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sdy01005]
D SDY_0197 lpxA; UDP-N-acetylglucosamine acetyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SDY_0198 lpxB; tetraacyldisaccharide-1-P K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SDY_0126 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SDY_0195 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SDY_0276 ybbF; conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SDY_2343 ycaH; YcaH K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SDY_2293 htrB; heat shock protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SDY_1142 msbB; suppressor of htrB K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SDY_P110 msbB2; MsbB2 K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SDY_2576 ddg; putative heat shock protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D SDY_0905 conserved hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D SDY_4063 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SDY_2453 conserved hypothetical protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SDY_0545 hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D SDY_4099 yjdB; conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SDY_1264 kdsA; 2-dehydro-3-deoxyphosphooctulonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SDY_2340 kdsB; CTP:CMP-3-deoxy-D-manno-octulosonate transferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SDY_3379 yrbI; conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SDY_3378 yrbH; putative isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SDY_4053 rfaC; heptosyl transferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SDY_4052 rfaF; ADP-heptose--lps heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SDY_4061 rfaG; glucosyltransferase I K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SDY_4048 yibD; putative regulator K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D SDY_4054 waaL; lipid A-core:surface polymer ligase WaaL K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D SDY_4059 rfaI; Lipopolysaccharide 1,3-galactosyltransferase K03275 waaO; UDP-glucose:(glucosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SDY_4060 waaP; putative LPS biosynthesis enzyme K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D SDY_4062 waaQ; lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D SDY_4058 rfaJ; Lipopolysaccharide 1,2-glucosyltransferase K03276 waaR; UDP-glucose/galactose:(glucosyl)LPS alpha-1,2-glucosyl/galactosyltransferase [EC:2.4.1.-]
D SDY_4056 waaW; UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase K12985 waaW; (galactosyl)LPS 1,2-glucosyltransferase [EC:2.4.1.-]
D SDY_4055 waaX; putative beta1,4-galactosyltransferase WaaX K23067 waaX; beta-1,4-galactosyltransferase
D SDY_4057 rfaY; Lipopolysaccharide core biosynthesis protein rfaY K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-]
D SDY_P108 rfbU; UDP-sugar hydrolase K23160 wabB; GlcNAc transferase
D SDY_3790 yijP; conserved hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D SDY_0248 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SDY_0219 yaeD; putative phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SDY_3235 putative kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SDY_4051 rfaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D SDY_2211 rfbQ; rhamnosyl transferase I K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D SDY_2210 rfbR; rhamnosyl transferase II K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D SDY_3954 wecF; TDP-Fuc4NAc:lipidII transferase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D SDY_2214 wzzB; regulator of length of O-antigen component of lipopolysaccharide chains K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D SDY_3964 rfe; UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sdy01011]
D SDY_3370 murA; UDP-N-glucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SDY_3756 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SDY_0121 murC; UDP-N-acetyl-muramate:alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SDY_0118 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SDY_0115 murE; meso-diaminopimelate-adding enzyme K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SDY_0122 ddlB; D-alanine-D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_0365 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SDY_4521 alr; alanine racemase 1 K01775 alr; alanine racemase [EC:5.1.1.1]
D SDY_3761 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SDY_1232 conserved hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SDY_0117 mraY; possible phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SDY_0120 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SDY_0843 ybjG; conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SDY_2083 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D SDY_3682 mrcA; peptidoglycan synthetase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SDY_0165 mrcB; peptidoglycan synthetase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SDY_0557 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SDY_0114 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SDY_2233 dacD; penicillin binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_0841 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_0554 dacA; D-alanyl-D-alanine carboxypeptidase, fraction A K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SDY_3363 dacB; D-alanyl-D-alanine carboxypeptidase, fraction B K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SDY_0370 yaiH; putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D SDY_2154 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SDY_3389 mtgA; putative peptidoglycan enzyme K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SDY_2243 erfK; conserved hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D SDY_1909 ynhG; conserved hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG
D SDY_0777 ybiS; conserved hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS
D SDY_2037 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D SDY_2332 ycbB; putative amidase K21470 ycbB; L,D-transpeptidase YcbB
D SDY_2527 mepA; murein DD-endopeptidase, penicillin-insensitive K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D SDY_1881 ydhO; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D SDY_0904 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SDY_1143 yebA; conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SDY_4653 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SDY_3031 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D SDY_2897 mltB; membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D SDY_3109 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D SDY_0230 dniR; transcriptional regulator for nitrite reductase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SDY_1231 mltE; murein transglycosylase E K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D SDY_2748 yfhD; putative periplasmic binding transport protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D SDY_2053 yceG; putative thymidylate kinase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SDY_0555 rlpA; minor lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SDY_4420 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_2633 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_3034 putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_2396 putative regulator K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_0140 ampD; regulates ampC K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_1908 lpp; murein lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:sdy01004]
D SDY_2058 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SDY_2059 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SDY_2522 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SDY_2055 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDY_3629 putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SDY_2057 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SDY_0927 fabA; beta-hydroxydecanoyl thioester dehydrase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SDY_0196 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SDY_1368 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SDY_0404 tesA; acyl-CoA thioesterase I K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SDY_0389 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D SDY_1317 yciA; conserved hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D SDY_0287 ybaW; conserved hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D SDY_1709 fadD; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDY_3090 conserved hypothetical protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SDY_4533 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SDY_2060 plsX; glycerolphosphate auxotrophy in plsB background K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SDY_3242 ygiH; conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SDY_3219 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:sdy01008]
D SDY_0526 entB; 2,3-dihydro-2,3-dihydroxybenzoate synthetase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D SDY_0511 entD; enterochelin synthetase, component D K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D SDY_0525 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SDY_0515 entF; ATP-dependent serine activating enzyme K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D SDY_0528 ybdB; conserved hypothetical protein K24147 entH; proofreading thioesterase EntH
C 01006 Prenyltransferases [BR:sdy01006]
D SDY_0309 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SDY_3368 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SDY_0190 yaeS; conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SDY_4418 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SDY_3807 menA; MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SDY_4534 ubiA; 4-hydroxybenzoate-octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:sdy01007]
D SDY_2600 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SDY_0614 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SDY_0160 yadB; putative tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SDY_1860 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDY_3695 trpS; tryptophan tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SDY_0278 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDY_1180 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDY_2181 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDY_0048 ileS; isoleucine tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDY_4282 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDY_0564 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDY_3192 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDY_1153 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDY_2327 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDY_2710 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDY_4344 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SDY_4345 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SDY_2368 serS; serine tRNA synthetase; also charges selenocystein tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDY_0213 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDY_1814 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDY_2893 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDY_1809 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDY_1808 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDY_2329 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SDY_3707 avtA; alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D SDY_2486 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SDY_2577 putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D SDY_4520 tyrB; tyrosine aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SDY_0532 ybdL; putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D SDY_2220 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SDY_4050 kbl; 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SDY_0830 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SDY_1845 malY; MalY K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SDY_3521 argD; acetylornithine delta-aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SDY_0832 bioA; 7,8-diaminopelargonic acid synthetase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SDY_0170 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SDY_3978 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SDY_2354 serC; 3-phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SDY_2449 hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SDY_3957 wecE; putative regulator K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sdy00194]
D SDY_4017 atpC; membrane-bound ATP synthase, F1 sector, epsilon-subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SDY_4016 atpD; membrane-bound ATP synthase, F1 sector, beta-subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SDY_4015 atpG; membrane-bound ATP synthase, F1 sector, gamma-subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SDY_4014 atpA; membrane-bound ATP synthase, F1 sector, alpha-subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SDY_4013 atpH; membrane-bound ATP synthase, F1 sector, delta-subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SDY_4012 atpF; membrane-bound ATP synthase, F0 sector, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SDY_4011 atpE; membrane-bound ATP synthase, F0 sector, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SDY_4010 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SDY_4009 atpI; membrane-bound ATP synthase K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sdy03000]
D SDY_1045 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDY_3840 rhaR; positive regulator for rhaRS operon K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D SDY_3841 rhaS; positive regulator for rhaBAD operon K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D SDY_4097 adiY; putative ARAC-type regulatory protein K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D SDY_2635 yfeG; putative ARAC-type regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D SDY_4505 soxS; regulation of superoxide response regulon K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SDY_1596 marA; MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SDY_4657 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SDY_3533 yhiX; putative ARAC-type regulatory protein K21905 gadX; AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
D SDY_1688 yeaM; putative ARAC-type regulatory protein K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D SDY_0863 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SDY_3026 gcvA; positive regulator of gcv operon K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SDY_3975 ilvY; positive regulator for ilvC K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D SDY_3915 metR; regulator for metE and metH K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D SDY_0019 nhaR; transcriptional activator of nhaA K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D SDY_3796 oxyR; OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SDY_3165 iciA; replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SDY_3310 tdcA; transcriptional activator of tdc operon K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D SDY_0398 ybbS; putative transcriptional regulator LYSR-type K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D SDY_1345 cysB; positive transcriptional regulator for cysteine regulon K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SDY_2246 cbl; transcriptional regulator cys regulon K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D SDY_1700 yeaT; putative transcriptional regulator LYSR-type K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D SDY_2245 nac; nitrogen assimilation control protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D SDY_3419 qseA; quorum sensing regulator A K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D SDY_3985 yifDA; Transcription regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D SDY_1408 ycjZ; putative transcriptional regulator LYSR-type K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling
D SDY_0842 deoR; transcriptional repressor for deo operon, tsx, nupG K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SDY_3652 glpR; repressor of the glp operon K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SDY_2262 gatR; Galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D SDY_3023 fucR; positive regulator of the fuc operon K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D SDY_2904 srlR; regulator for glucitol operon K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D SDY_4360 yjfQ; putative DEOR-type transcriptional regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D SDY_0379 lacI; transcriptional repressor of the lac operon K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D SDY_2129 galS; mgl repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDY_3054 galR; repressor of galETK operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDY_3710 xylR; putative regulator of xyl operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDY_3994 rbsR; regulator for rbs operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SDY_3803 cytR; regulator for deo operon, udp, cdd, tsx, nupC, and nupG K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D SDY_0110 fruR; transcriptional repressor of fru operon and others K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SDY_4260 treR; repressor of treA,B,C K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D SDY_2911 ascG; ascBF operon repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D SDY_1884 purR; PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D SDY_3589 gntR; regulator of gluconate operon K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SDY_3259 ebgR; regulator of ebg operon K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D SDY_1841 malI; repressor of malX and Y genes K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D SDY_4170 yidP; putative transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D SDY_4114 phnF; putative transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D SDY_1224 fadR; negative regulator for fad regulon, and positive activator of fabA K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D SDY_0143 pdhR; transcriptional regulator for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SDY_3281 exuR; negative regulator of exu regulon, exuT, uxaAC, and uxuB K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D SDY_4037 lldR; transcriptional regulator K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D SDY_3401 yhcK; putative FADA-type transcriptional regulator K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D SDY_2864 putative transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SDY_1957 conserved hypothetical protein K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D SDY_2854 ygaE; putative transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D SDY_1585 ydfH; conserved hypothetical protein K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D SDY_0455 acrR; acrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D SDY_4071 ttk; putative transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D SDY_0988 ycdC; putative tet operon regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D SDY_1872 conserved hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SDY_1837 uidR; repressor for uid operon K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D SDY_4269 yjgJ; conserved hypothetical protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D SDY_2039 ycfQ; conserved hypothetical protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D SDY_3765 yijC; conserved hypothetical protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D SDY_0807 ybiH; putative transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D SDY_0750 putative DEOR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
D SDY_4005 asnC; regulator for asnA, asnC and gidA K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D SDY_2372 lrp; regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SDY_0384 ybaO; putative LRP-like transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D SDY_3556 yhiF; conserved hypothetical protein K21901 dctR; LuxR family transcriptional regulator, dicarboxylate transport regulator
D SDY_3658 malT; positive regulator of mal regulon K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D SDY_3539 yhiE; conserved hypothetical protein K21907 gadE; LuxR family transcriptional regulator, glutamate-dependent acid resistance regulator
D SDY_1597 marR; MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D SDY_1865 slyA; transcriptional regulator for cryptic hemolysin K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SDY_2879 emrR; regulator of plasmid mcrB operon K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D SDY_2939 putative transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D SDY_0415 ybbI; putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SDY_3468 yhdM; putative transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D SDY_4504 soxR; redox-sensing activator of soxS K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D SDY_2162 yehV; putative transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D SDY_0623 fur; negative regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SDY_4528 yjbK; putative regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SDY_4323 iclR; repressor of aceBA operon K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D SDY_0396 ybbU; putative regulator K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D SDY_1975 putative regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D SDY_3519 crp; cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SDY_1415 fnr; Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SDY_2099 yeiL; putative transcriptional regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D SDY_2727 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D SDY_4411 yjeB; conserved hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D SDY_3561 arsR; transcriptional repressor of chromosomal ars operon K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SDY_1742 ydcN; conserved hypothetical protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D SDY_0779 putative toxin K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D SDY_2623 yfeT; conserved hypothetical protein K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D SDY_3755 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SDY_3438 fis; site-specific DNA inversion stimulation factor K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SDY_4654 trpR; regulator for trp operon and aroH K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D SDY_3369 nlp; regulatory factor of maltose metabolism K07724 ner; Ner family transcriptional regulator
D SDY_0097 yabN; putative transport protein K11925 sgrR; SgrR family transcriptional regulator
D SDY_4651 nadR; probable nadAB transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SDY_1945 ycjC; conserved hypothetical protein K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D SDY_2913 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SDY_3266 ygjM; conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SDY_2906 ygaA; putative 2-component transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D SDY_0708 modE; molybdate uptake regulatory protein K02019 modE; molybdate transport system regulatory protein
D SDY_2931 Potential molybdenum-pterin-binding-protein K02019 modE; molybdate transport system regulatory protein
D SDY_4348 yiaG; conserved hypothetical protein K07726 K07726; putative transcriptional regulator
D SDY_4143 putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D SDY_3636 yhhG; conserved hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D SDY_3773 metJ; repressor of all met genes but metF K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D SDY_4255 relB; RelB protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SDY_P073 conserved hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SDY_2279 yohL; conserved hypothetical protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D SDY_0298 bolA; possible regulator of murein genes K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SDY_P161 virB; VirB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDY_P032 parB; plasmid segregation protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDY_3903 rfaH; transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin K05785 rfaH; transcriptional antiterminator RfaH
D SDY_3413 argR; repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D SDY_0610 nagC; transcriptional repressor of N-acetylglucosamine operon K02565 nagC; N-acetylglucosamine repressor
D SDY_1562 mlc; putative NAGC-like transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D SDY_1401 tyrR; TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D SDY_2668 gcvR; transcriptional regulation of gcv operon K03567 gcvR; glycine cleavage system transcriptional repressor
D SDY_1941 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D SDY_1938 pspC; phage shock protein K03973 pspC; phage shock protein C
D SDY_3124 yqgE; conserved hypothetical protein K07735 algH; putative transcriptional regulator
D SDY_0056 caiF; transcriptional regulator of cai operon K08277 caiF; transcriptional activator CaiF
D SDY_0161 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SDY_0321 ybaD; conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D SDY_0477 crl; Crl K11926 crl; sigma factor-binding protein Crl
D SDY_0111 yabB; conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
D SDY_3216 conserved hypothetical protein K07471 ygiV; probable transcriptional regulator
C 03021 Transcription machinery [BR:sdy03021]
D SDY_3471 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDY_3741 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDY_3740 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDY_4081 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SDY_3251 rpoD; RNA polymerase, sigma(70) factor K03086 rpoD; RNA polymerase primary sigma factor
D SDY_2940 rpoS; RNA polymerase, sigma S factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D SDY_2814 rpoE; RNA polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SDY_4299 fecI; probable RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SDY_3612 rpoH; RNA polymerase, sigma(32) factor K03089 rpoH; RNA polymerase sigma-32 factor
D SDY_3383 rpoN; RNA polymerase, sigma(54 or 60) factor K03092 rpoN; RNA polymerase sigma-54 factor
D SDY_1095 fliA; alternative sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
D SDY_0083 hepA; probable ATP-dependent RNA helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D SDY_3348 nusA; transcription pausing K02600 nusA; transcription termination/antitermination protein NusA
D SDY_0318 nusB; NusB K03625 nusB; transcription antitermination protein NusB
D SDY_3746 nusG; component in transcription antitermination K02601 nusG; transcription termination/antitermination protein NusG
D SDY_3405 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D SDY_3404 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D SDY_2813 rseA; sigma-E factor, negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D SDY_2812 rseB; regulates activity of sigma-E factor K03598 rseB; sigma-E factor negative regulatory protein RseB
D SDY_2811 rseC; sigma-E factor, negative regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D SDY_0161 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SDY_3362 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D SDY_3670 greB; transcription elongation factor K04760 greB; transcription elongation factor GreB
D SDY_3966 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SDY_0207 yaeO; conserved hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:sdy03019]
D SDY_2067 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SDY_3422 cafA; bundles of cytoplasmic filaments K08301 rng; ribonuclease G [EC:3.1.26.-]
D SDY_2808 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDY_4410 vacB; putative enzyme K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDY_4430 yjeR; conserved hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SDY_3969 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SDY_0806 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SDY_3341 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SDY_3921 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_3586 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_3582 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_2996 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDY_3343 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SDY_3966 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SDY_3831 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SDY_0013 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SDY_4449 mopA; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDY_4417 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D SDY_2690 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SDY_0159 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SDY_3047 ygdP; putative invasion protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SDY_2892 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D SDY_3427 yhdA; conserved hypothetical protein K18765 csrD; RNase E specificity factor CsrD
D SDY_3808 menG; menaquinone biosynthesis protein K02553 rraA; regulator of ribonuclease activity A
D SDY_4277 yjgD; conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D SDY_3386 yhbJ; conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D SDY_1774 hrpA; helicase, ATP-dependent K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:sdy03011]
D SDY_2347 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SDY_0185 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SDY_3490 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SDY_3472 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SDY_3479 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SDY_4369 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SDY_3502 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SDY_3482 rpsH; 30S ribosomal subunit protein S8, and regulator K02994 RP-S8; small subunit ribosomal protein S8
D SDY_3406 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SDY_3497 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SDY_3473 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SDY_3503 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SDY_3474 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SDY_3483 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SDY_3344 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SDY_2783 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SDY_3487 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SDY_4371 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SDY_3492 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SDY_0045 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SDY_3249 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SDY_3744 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SDY_3493 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SDY_3496 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SDY_3495 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SDY_3484 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SDY_3481 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SDY_4372 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SDY_3743 rplJ; 50S ribosomal subunit protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SDY_3745 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SDY_3742 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SDY_3407 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SDY_3486 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SDY_3477 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SDY_3489 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SDY_3470 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SDY_3480 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SDY_2780 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SDY_1811 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SDY_3367 rplU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SDY_3491 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SDY_3494 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SDY_3485 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SDY_3366 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SDY_4067 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SDY_3488 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SDY_3478 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SDY_3801 rpmE; 50S ribosomal subunit protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SDY_2061 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SDY_4066 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SDY_4185 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SDY_1812 rpmI; 50S ribosomal subunit protein A K02916 RP-L35; large subunit ribosomal protein L35
D SDY_3475 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SDY_0894 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SDY_0224 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3988 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_2831 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3716 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3890 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3757 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3451 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3449 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_0220 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3991 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3760 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_2834 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3894 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3719 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3455 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_0223 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3717 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3452 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3758 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_2832 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3989 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3891 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sdy03009]
D SDY_2808 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDY_4430 yjeR; conserved hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SDY_2807 era; GTP-binding protein K03595 era; GTPase
D SDY_3364 yhbZ; putative GTP-binding factor K03979 obgE; GTPase [EC:3.6.5.-]
D SDY_0161 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SDY_3348 nusA; transcription pausing K02600 nusA; transcription termination/antitermination protein NusA
D SDY_0318 nusB; NusB K03625 nusB; transcription antitermination protein NusB
D SDY_3746 nusG; component in transcription antitermination K02601 nusG; transcription termination/antitermination protein NusG
D SDY_0896 rsuA; 16S pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SDY_0076 ksgA; S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SDY_3465 sun; conserved hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SDY_4630 yjjT; putative enzyme K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SDY_3616 yhhF; conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SDY_3126 yggJ; conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SDY_1986 yebU; putative nucleolar proteins K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D SDY_4008 gidB; GldB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SDY_0112 yabC; putative apolipoprotein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SDY_3325 yraL; conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SDY_3565 yhiQ; conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D SDY_1968 yebH; putative enzyme K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D SDY_4409 yjfH; conserved hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SDY_3360 ftsJ; cell division protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SDY_0790 ybiN; conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D SDY_3267 ygjO; putative enzyme K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D SDY_0558 ybeA; conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SDY_0942 yccW; conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SDY_3563 yhiR; conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D SDY_0921 ycbY; putative oxidoreductase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D SDY_3024 ygdE; conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D SDY_2713 yfgB; conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SDY_3002 ygcA; putative enzyme K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SDY_0736 ybjF; putative enzyme K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D SDY_0082 yabO; conserved hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SDY_1339 yciL; conserved hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SDY_2065 yceC; conserved hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SDY_2837 sfhB; suppressor of ftsH mutation K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SDY_2017 ymfC; conserved hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D SDY_4310 yjbC; conserved hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D SDY_2824 yfiF; conserved hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SDY_4632 rimI; acyltransferase for 30S ribosomal subunit protein S18 K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SDY_2086 rimJ; acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D SDY_0743 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D SDY_1751 rimL; acetyl transferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D SDY_2782 yfjA; conserved hypothetical protein K02860 rimM; 16S rRNA processing protein RimM
D SDY_2356 ycaO; conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D SDY_3436 prmA; methylase for 50S ribosomal subunit protein L11 K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SDY_2530 yfcB; putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D SDY_2024 ycfD; conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D SDY_2067 rne; RNase E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SDY_3422 cafA; bundles of cytoplasmic filaments K08301 rng; ribonuclease G [EC:3.1.26.-]
D SDY_3123 yqgF; conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SDY_3341 deaD; inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SDY_2817 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D SDY_4431 yjeQ; conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SDY_2707 putative GTP-binding factor K03977 engA; GTPase
D SDY_4416 hflX; GTP-binding subunit of protease specific for phage lambda cII repressor K03665 hflX; GTPase
D SDY_3459 yrdC; conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SDY_4082 spoT; (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SDY_3346 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SDY_3349 yhbC; conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D SDY_0280 ybcJ; conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D SDY_0559 ybeB; conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D SDY_0595 ybeY; conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D SDY_3361 yhbY; conserved hypothetical protein K07574 yhbY; RNA-binding protein
D SDY_4252 yjgA; putative alpha helix protein K09889 yjgA; ribosome-associated protein
D SDY_0926 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D SDY_3384 yhbH; probable sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D SDY_2768 yfiA; putative yhbH sigma 54 modulator K05809 raiA; ribosome-associated inhibitor A
D SDY_1252 ychF; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D SDY_2062 yceD; conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:sdy03016]
D SDY_2464 elaC; conserved hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SDY_3239 cca; tRNA nucleotidyl transferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SDY_2600 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SDY_0213 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SDY_0048 ileS; isoleucine tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SDY_0564 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDY_2181 metG; methionine tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SDY_0614 glnS; glutamine tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SDY_1180 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDY_3192 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SDY_1153 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDY_2893 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SDY_2327 asnS; asparagine tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SDY_1814 thrS; threonine tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SDY_2368 serS; serine tRNA synthetase; also charges selenocystein tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SDY_0278 cysS; cysteine tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SDY_4282 valS; valine tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SDY_2710 hisS; histidine tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SDY_1809 pheS; phenylalanine tRNA synthetase, alpha-subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SDY_1808 pheT; phenylalanine tRNA synthetase, beta-subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SDY_1860 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDY_3695 trpS; tryptophan tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SDY_3856 yihZ; conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SDY_2047 ycfF; conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SDY_3112 yggH; conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SDY_0214 yaeB; conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D SDY_2517 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SDY_3345 truB; tRNA pseudouridine 5S synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SDY_2944 ygbO; putative hydrogenase subunit K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D SDY_2726 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDY_3459 yrdC; conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SDY_4418 miaA; delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SDY_4189 thdF; GTP-binding protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SDY_4007 gidA; glucose-inhibited division K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SDY_1509 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SDY_4385 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SDY_4186 rnpA; RNase P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SDY_1878 rnt; RNase T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D SDY_4074 rph; RNase PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SDY_1366 rnb; RNase II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D SDY_1708 rnd; RNase D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D SDY_0163 yadP; conserved hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D SDY_4652 yjjK; putative ATP-binding component of a transport system K06020 ettA; energy-dependent translational throttle protein EttA
D SDY_4344 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SDY_4345 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SDY_0160 yadB; putative tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SDY_0437 ybaK; conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SDY_1685 yeaK; conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D SDY_2749 yfhC; putative deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SDY_4525 yjbN; conserved hypothetical protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D SDY_3437 yhdG; putative dehydrogenase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SDY_0597 yleA; conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SDY_1169 yecO; conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D SDY_1170 yecP; putative enzyme K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D SDY_2337 smtA; S-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D SDY_4664 lasT; conserved hypothetical protein K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D SDY_3763 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D SDY_2781 trmD; tRNA methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SDY_2824 yfiF; conserved hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SDY_4083 spoU; putative RNA methylase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D SDY_2728 putative ATP synthase beta subunit K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D SDY_4039 yibK; conserved hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SDY_2816 yfiC; putative enzyme K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D SDY_3008 yqcB; conserved hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D SDY_0082 yabO; conserved hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SDY_2019 ycfB; conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SDY_1426 ydaO; conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D SDY_3621 yhhP; conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SDY_3504 yheL; conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SDY_3505 yheM; conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SDY_3506 yheN; conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SDY_0944 yccK; putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SDY_2724 yfhF; putative regulator K13628 iscA; iron-sulfur cluster assembly protein
D SDY_3184 ygfZ; conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D SDY_2523 putative peptidase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D SDY_0329 queA; probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SDY_0286 ybaX; conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SDY_2967 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SDY_2981 ygcF; conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SDY_3011 yqcD; conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SDY_4425 yjeS; conserved hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SDY_0399 ybbB; putative capsule anchoring protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D SDY_0328 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SDY_0307 yajK; putative oxidoreductase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SDY_0206 mesJ; cell cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SDY_2661 ypfI; conserved hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D SDY_1711 yeaZ; conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SDY_3248 ygjD; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SDY_4421 yjeE; conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SDY_3030 ygdL; putative enzyme K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D SDY_4410 vacB; putative enzyme K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SDY_3343 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:sdy03012]
D SDY_1358 yciH; conserved hypothetical protein K03113 EIF1; translation initiation factor 1
D SDY_3347 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SDY_1813 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SDY_3514 yheS; putative ATP-binding component of a transport system K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SDY_0186 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D SDY_3500 tufA; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SDY_3748 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SDY_3501 fusA; GTP-binding protein chain elongation factor EF-G K02355 fusA; elongation factor G
D SDY_4213 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D SDY_1260 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D SDY_0188 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D SDY_1261 hemK; possible protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SDY_1253 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SDY_2377 infA; protein chain initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SDY_0908 yeiP; putative elongation factor K02356 efp; elongation factor P
D SDY_4390 efp; elongation factor P K02356 efp; elongation factor P
D SDY_4399 yjeA; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D SDY_4389 yjeK; conserved hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D SDY_2525 putative transporting ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D SDY_3191 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D SDY_4634 prfC; peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
D SDY_0481 prfH; probable peptide chain release factor K02839 prfH; peptide chain release factor
D SDY_0210 yaeJ; conserved hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:sdy03110]
D SDY_2379 clpA; ATP-binding component of serine protease K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D SDY_2835 clpB; heat shock protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SDY_0294 clpX; ATP-dependent specificity component of clpP serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SDY_3806 hslU; heat shock protein hslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SDY_0446 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D SDY_0013 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SDY_2722 hscA; HscA K04044 hscA; molecular chaperone HscA
D SDY_2193 yegD; putative heat shock protein K04046 yegD; hypothetical chaperone protein
D SDY_4449 mopA; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDY_0014 dnaJ; heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D SDY_0974 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D SDY_0080 yabH; putative DNA-binding protein K05801 djlA; DnaJ like chaperone protein
D SDY_2723 yfhE; conserved hypothetical protein K04082 hscB; molecular chaperone HscB
D SDY_3677 yrfI; conserved hypothetical protein K04083 hslO; molecular chaperone Hsp33
D SDY_2787 grpE; GrpE K03687 GRPE; molecular chaperone GrpE
D SDY_4173 ibpA; heat shock protein K04080 ibpA; molecular chaperone IbpA
D SDY_4172 ibpB; heat shock protein K04081 ibpB; molecular chaperone IbpB
D SDY_3678 yrfH; conserved hypothetical protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D SDY_4448 mopB; GroES K04078 groES; chaperonin GroES
D SDY_0178 htrA; periplasmic serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D SDY_3359 hflB; HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SDY_4010 atpB; membrane-bound ATP synthase, F0 sector, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SDY_4042 secB; SecB K03071 secB; preprotein translocase subunit SecB
D SDY_3833 yiiO; Uncharacterized periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D SDY_1534 spy; Spy K06006 cpxP; periplasmic protein CpxP/Spy
D SDY_3724 yjaI; conserved hypothetical protein K07803 zraP; zinc resistance-associated protein
D SDY_3543 hdeA; conserved hypothetical protein K19777 hdeA; acid stress chaperone HdeA
D SDY_3544 hdeB; conserved hypothetical protein K19778 hdeB; acid stress chaperone HdeB
D SDY_3082 hybF; HybF K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D SDY_2923 hypA; pleiotrophic effects on 3 hydrogenase isozymes K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D SDY_2924 hypB; guanine-nucleotide binding protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D SDY_0972 torD; part of trimethylamine-N-oxide oxidoreductase K03533 torD; TorA specific chaperone
D SDY_3525 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SDY_0277 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SDY_0291 ybaU; putative protease maturation protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SDY_3508 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SDY_4377 fklB; FKBP-type 22KD peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D SDY_0050 slpA; probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D SDY_3510 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D SDY_3973 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D SDY_0078 surA; survival protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SDY_3968 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D SDY_2825 trxC; putative thioredoxin-like protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D SDY_0407 ybbN; putative thioredoxin-like protein K05838 ybbN; putative thioredoxin
D SDY_0746 grxA; glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase K03674 grxA; glutaredoxin 1
D SDY_2089 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D SDY_4043 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D SDY_1880 ydhD; conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D SDY_3885 dsbA; protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SDY_1222 dsbB; DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D SDY_3189 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SDY_4441 dsbD; thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D SDY_0883 dsbE; disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:sdy04131]
D SDY_2714 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SDY_1488 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDY_0702 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_1905 pykF; pyruvate kinase I, fructose stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_1141 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_0446 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:sdy04121]
C 03051 Proteasome [BR:sdy03051]
D SDY_0446 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:sdy03032]
D SDY_0233 rnhA; RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SDY_1045 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDY_3726 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D SDY_0292 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SDY_1807 himA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D SDY_2346 himD; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D SDY_4184 dnaA; DnaA K02313 dnaA; chromosomal replication initiator protein
D SDY_4522 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SDY_4615 dnaC; chromosome replication K02315 dnaC; DNA replication protein DnaC
D SDY_3250 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SDY_4508 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDY_0200 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDY_4183 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDY_4283 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SDY_0562 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDY_2051 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDY_0234 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDY_4631 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SDY_1128 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SDY_0199 rnhB; RNAse HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SDY_3879 polA; PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDY_2608 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDY_1826 tus; DNA-binding protein K10748 tus; DNA replication terminus site-binding protein
D SDY_3692 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SDY_0627 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D SDY_2685 putative DNA replication factor K10763 hda; DnaA-homolog protein
D SDY_2423 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SDY_4181 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SDY_3218 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDY_3210 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SDY_1344 topA; DNA topoisomerase type I, omega protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SDY_1510 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sdy03036]
D SDY_1045 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDY_2808 rnc; RNase III, ds RNA K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SDY_1289 hns; DNA-binding protein HLP-II K03746 hns; DNA-binding protein H-NS
D SDY_2859 stpA; DNA-binding protein K11685 stpA; DNA-binding protein StpA
D SDY_3726 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D SDY_0292 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SDY_1807 himA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D SDY_2346 himD; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D SDY_0974 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D SDY_0973 yccD; conserved hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D SDY_4657 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SDY_4184 dnaA; DnaA K02313 dnaA; chromosomal replication initiator protein
D SDY_3328 yraO; conserved hypothetical protein K12961 diaA; DnaA initiator-associating protein
D SDY_0941 yccV; conserved hypothetical protein K11940 hspQ; heat shock protein HspQ
D SDY_0783 dps; global regulator K04047 dps; starvation-inducible DNA-binding protein
D SDY_3438 fis; site-specific DNA inversion stimulation factor K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SDY_4417 hfq; host factor I for bacteriophage Q beta replication K03666 hfq; host factor-I protein
D SDY_3165 iciA; replication initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SDY_2372 lrp; regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SDY_0893 yejK; conserved hypothetical protein K06899 ndpA; nucleoid-associated protein
D SDY_2334 mukB; kinesin-like cell division protein involved in chromosome partitioning K03632 mukB; chromosome partition protein MukB
D SDY_2335 mukE; conserved hypothetical protein K03804 mukE; chromosome partition protein MukE
D SDY_2336 mukF; MukF K03633 mukF; chromosome partition protein MukF
D SDY_0124 ftsA; ATP-binding cell division protein K03590 ftsA; cell division protein FtsA
D SDY_2947 conserved hypothetical protein K05589 ftsB; cell division protein FtsB
D SDY_3614 ftsE; ATP-binding component of a membrane-associated complex involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D SDY_0114 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SDY_2371 ftsK; cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SDY_0113 ftsL; cell division protein K03586 ftsL; cell division protein FtsL
D SDY_3804 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN
D SDY_0123 ftsQ; cell division protein K03589 ftsQ; cell division protein FtsQ
D SDY_0119 ftsW; FtsW K03588 ftsW; cell division protein FtsW
D SDY_3613 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein
D SDY_0125 ftsZ; tubulin-like GTP-binding protein and GTPase K03531 ftsZ; cell division protein FtsZ
D SDY_2609 zipA; cell division protein involved in FtsZ ring K03528 zipA; cell division protein ZipA
D SDY_3171 ygfE; conserved hypothetical protein K09888 zapA; cell division protein ZapA
D SDY_3816 yiiU; conserved hypothetical protein K09892 zapB; cell division protein ZapB
D SDY_0919 ycbW; conserved hypothetical protein K18657 zapC; cell division protein ZapC
D SDY_0132 yacF; conserved hypothetical protein K18778 zapD; cell division protein ZapD
D SDY_3408 yhcM; conserved hypothetical protein K06916 zapE; cell division protein ZapE
D SDY_4376 ytfB; conserved hypothetical protein K07269 ytfB; cell division protein YtfB
D SDY_4420 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_2633 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_3034 putative amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SDY_0456 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SDY_1207 minC; MinC K03610 minC; septum site-determining protein MinC
D SDY_1206 minD; MinD K03609 minD; septum site-determining protein MinD
D SDY_1205 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D SDY_4071 ttk; putative transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D SDY_0627 seqA; negative modulator of initiation of replication K03645 seqA; negative modulator of initiation of replication
D SDY_3426 mreB; penicillin binding protein 3 K03569 mreB; rod shape-determining protein MreB and related proteins
D SDY_3425 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D SDY_3424 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD
D SDY_0556 mrdB; rod shape-determining membrane protein K05837 rodA; rod shape determining protein RodA
D SDY_P031 parA; plasmid segregation protein K03496 parA; chromosome partitioning protein
D SDY_P161 virB; VirB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDY_P032 parB; plasmid segregation protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDY_3218 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDY_3210 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SDY_4007 gidA; glucose-inhibited division K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SDY_4008 gidB; GldB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SDY_3934 xerC; site-specific recombinase K03733 xerC; integrase/recombinase XerC
D SDY_3188 xerD; site-specific recombinase K04763 xerD; integrase/recombinase XerD
D SDY_2182 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SDY_3523 fic; Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SDY_3878 yihA; conserved hypothetical protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:sdy03400]
D SDY_1416 ogt; O-6-alkylguanine-DNA/cysteine-protein methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SDY_0643 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SDY_2823 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SDY_3111 mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SDY_1856 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SDY_0129 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SDY_4070 dut; deoxyuridinetriphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SDY_0863 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SDY_0864 alkB; DNA repair system specific for alkylated DNA K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D SDY_3252 ygjF; conserved hypothetical protein K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D SDY_2194 alkA; 3-methyl-adenine DNA glycosylase II, inducible K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SDY_4353 tag; 3-methyl-adenine DNA glycosylase I, constitutive K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SDY_4065 mutM; formamidopyrimidine DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SDY_0649 nei; endonuclease VIII and DNA N-glycosylase with an AP lyase activity K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SDY_1527 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SDY_2107 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SDY_3728 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D SDY_3190 recJ; ssDNA exonuclease, 5' --> 3' specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SDY_2608 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SDY_3879 polA; PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SDY_4509 uvrA; excision nuclease subunit A K03701 uvrA; excinuclease ABC subunit A
D SDY_0827 uvrB; excision nuclease subunit B K03702 uvrB; excinuclease ABC subunit B
D SDY_1105 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D SDY_1539 putative excinuclease subunit K05984 cho; excinuclease Cho [EC:3.1.25.-]
D SDY_3932 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SDY_3741 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SDY_3740 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SDY_3471 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SDY_4081 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SDY_2036 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SDY_2933 mutS; methyl-directed mismatch repair K03555 mutS; DNA mismatch repair protein MutS
D SDY_4419 mutL; MutL K03572 mutL; DNA mismatch repair protein MutL
D SDY_3048 mutH; methyl-directed mismatch repair K03573 mutH; DNA mismatch repair protein MutH
D SDY_2231 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SDY_2705 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SDY_0308 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SDY_1130 conserved hypothetical protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D SDY_0200 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SDY_4183 dnaN; DNA polymerase III, beta-subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SDY_4283 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SDY_0562 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SDY_2051 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SDY_0234 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SDY_0449 dnaX; DNA polymerase III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SDY_4631 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SDY_1128 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SDY_4508 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDY_3692 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SDY_1046 vsr; DNA mismatch endonuclease, patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D SDY_3037 recB; ATP-dependent dsDNA/ssDNA exonuclease V subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SDY_3039 recC; ATP-dependent dsDNA/ssDNA exonuclease V subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SDY_3036 recD; ATP-dependent dsDNA/ssDNA exonuclease V subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SDY_2895 recA; DNA-dependent ATPase, DNA- and ATP-dependent coprotease K03553 recA; recombination protein RecA
D SDY_1148 ruvA; Holliday junction helicase subunit B K03550 ruvA; holliday junction DNA helicase RuvA
D SDY_1147 ruvB; Holliday junction helicase subunit A K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SDY_1150 ruvC; Holliday junction nuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SDY_1435 putative endonuclease of prophage CP-933O K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D SDY_3802 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SDY_4370 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D SDY_0452 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
D SDY_4616 dnaT; DNA biosynthesis K02317 dnaT; DNA replication protein DnaT
D SDY_0341 sbcC; ATP-dependent dsDNA exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D SDY_4650 sms; probable ATP-dependent protease K04485 radA; DNA repair protein RadA/Sms
D SDY_4182 recF; ssDNA and dsDNA binding, ATP binding K03629 recF; DNA replication and repair protein RecF
D SDY_4084 recG; DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SDY_2806 recO; RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SDY_0447 recR; recombination and repair protein K06187 recR; recombination protein RecR
D SDY_2789 recN; protein used in recombination and DNA repair K03631 recN; DNA repair protein RecN (Recombination protein N)
D SDY_0344 yaiD; conserved hypothetical protein K03554 rdgC; recombination associated protein RdgC
D SDY_0895 yejH; putative ATP-dependent helicase K19789 radD; DNA repair protein RadD
D SDY_4287 yjgR; conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D SDY_2423 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SDY_4181 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SDY_1344 topA; DNA topoisomerase type I, omega protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SDY_3726 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D SDY_0292 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SDY_3438 fis; site-specific DNA inversion stimulation factor K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SDY_1807 himA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D SDY_2346 himD; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D SDY_3921 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_3586 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_3582 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SDY_1289 hns; DNA-binding protein HLP-II K03746 hns; DNA-binding protein H-NS
D SDY_0483 dinP; damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SDY_1221 umuC; SOS mutagenesis and repair K03502 umuC; DNA polymerase V
D SDY_1220 umuD; UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SDY_4531 lexA; regulator for SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D SDY_4076 dinD; DNA-damage-inducible protein K14623 dinD; DNA-damage-inducible protein D
D SDY_2092 dinI; damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D SDY_2894 oraA; OraA K03565 recX; regulatory protein
D SDY_3665 yhgA; conserved hypothetical protein K01157 rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-]
D SDY_0042 yadD; conserved hypothetical protein K24088 rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-]
D SDY_4600 conserved hypothetical protein K24089 rpnD; recombination-promoting nuclease RpnD [EC:3.1.21.-]
D SDY_2439 yfaD; conserved hypothetical protein K24090 rpnE; recombination-promoting nuclease RpnE
D SDY_3971 rep; rep helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D SDY_0937 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D SDY_0800 dinG; probably ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SDY_1712 putative enzyme K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SDY_2428 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit, B1 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDY_2868 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SDY_2429 nrdB; ribonucleoside-diphosphate reductase 1, beta subunit, B2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SDY_2869 nrdF; ribonucleoside-diphosphate reductase 2, beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:sdy03029]
D SDY_3347 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SDY_1813 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SDY_0186 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D SDY_3500 tufA; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SDY_3748 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SDY_3501 fusA; GTP-binding protein chain elongation factor EF-G K02355 fusA; elongation factor G
D SDY_2807 era; GTP-binding protein K03595 era; GTPase
D SDY_1860 tyrS; tyrosine tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SDY_0564 leuS; leucine tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SDY_1153 aspS; aspartate tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SDY_1180 argS; arginine tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SDY_4508 ssb; ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SDY_0193 yaeT; conserved hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D SDY_0013 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SDY_2787 grpE; GrpE K03687 GRPE; molecular chaperone GrpE
D SDY_4449 mopA; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDY_4448 mopB; GroES K04078 groES; chaperonin GroES
D SDY_0014 dnaJ; heat shock protein K03686 dnaJ; molecular chaperone DnaJ
D SDY_2726 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SDY_2723 yfhE; conserved hypothetical protein K04082 hscB; molecular chaperone HscB
D SDY_1880 ydhD; conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D SDY_2182 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SDY_4188 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDY_0446 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sdy02000]
D SDY_2344 msbA; ATP-binding transport protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SDY_0385 mdlA; ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDY_0386 mdlB; putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SDY_1025 iroC; putative ABC transporter protein K18895 iroC; ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
D SDY_0417 putative cytoplasmic membrane export protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D SDY_2375 cydC; ATP-binding component of cytochrome-related transport K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SDY_2374 cydD; ATP-binding component of cytochrome-related transport, Zn sensitive K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SDY_2382 ybjZ; putative ATP-binding component of a transport system K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SDY_0865 yojI; putative ATP-binding component of a transport system K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D SDY_0922 uup; putative ATP-binding component of a transport system K15738 uup; ABC transport system ATP-binding/permease protein
D SDY_2621 cysP; thiosulfate binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SDY_3830 sbp; periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SDY_2620 cysU; sulfate, thiosulfate transport system permease T protein K02046 cysU; sulfate/thiosulfate transport system permease protein
D SDY_2619 cysW; ABC-type sulfate transport system, permease component K02047 cysW; sulfate/thiosulfate transport system permease protein
D SDY_2618 cysA; ATP-binding component of sulfate permease A protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SDY_0710 modA; molybdate-binding periplasmic protein K02020 modA; molybdate transport system substrate-binding protein
D SDY_0711 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein
D SDY_0712 modC; ATP-binding component of molybdate transport K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SDY_0707 modF; ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D SDY_0505 tauA; taurine transport system periplasmic protein K15551 tauA; taurine transport system substrate-binding protein
D SDY_0503 tauC; taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D SDY_0504 tauB; taurine ATP-binding component of a transport system K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D SDY_2320 ycbO; conserved hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SDY_2323 ycbM; putative transport system permease protein K15554 ssuC; sulfonate transport system permease protein
D SDY_2324 ycbE; putative ATP-binding component of a transport system K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SDY_0095 tbpA; thiamin-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D SDY_0094 yabK; putative transport system permease protein K02063 thiP; thiamine transport system permease protein
D SDY_0093 yabJ; putative ATP-binding component of a transport system K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D SDY_2029 potD; spermidine/putrescine periplasmic transport protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SDY_2028 potC; spermidine/putrescine transport system permease K11070 potC; spermidine/putrescine transport system permease protein
D SDY_2027 potB; spermidine/putrescine transport system permease K11071 potB; spermidine/putrescine transport system permease protein
D SDY_2026 potA; ATP-binding component of spermidine/putrescine transport K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SDY_0741 potF; periplasmic putrescine-binding protein K11073 potF; putrescine transport system substrate-binding protein
D SDY_0738 potI; putrescine transport protein K11074 potI; putrescine transport system permease protein
D SDY_0739 potH; putrescine transport protein K11075 potH; putrescine transport system permease protein
D SDY_0740 potG; ATP-binding component of putrescine transport system K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SDY_1734 putative transport protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SDY_1733 putative ATP-binding component of a transport system K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SDY_2873 proW; high-affinity transport system for glycine betaine and proline K02001 proW; glycine betaine/proline transport system permease protein
D SDY_2872 proV; ATP-binding component of transport system for glycine, betaine and proline K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SDY_2157 yehZ; putative transport system permease protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SDY_2160 yehW; putative transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SDY_1521 hypothetical protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D SDY_1522 hypothetical protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D SDY_1520 putative transport system permease protein K05778 ynjC; putative thiamine transport system permease protein
D SDY_1519 putative ATP-binding component of a transport system K05779 ynjD; putative thiamine transport system ATP-binding protein
D SDY_1120 araF; L-arabinose-binding periplasmic protein K10537 araF; L-arabinose transport system substrate-binding protein
D SDY_1122 araH; ABC-type arabinose transport system, permease component K10538 araH; L-arabinose transport system permease protein
D SDY_1121 araG; ATP-binding component of high-affinity L-arabinose transport system K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D SDY_2130 mglB; galactose-binding transport protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D SDY_2137 mglC; methyl-galactoside transport and galactose taxis K10541 mglC; methyl-galactoside transport system permease protein
D SDY_4130 putative periplasmic ribose-binding protein of ABC transport system K10439 rbsB; ribose transport system substrate-binding protein
D SDY_3997 rbsC; D-ribose high-affinity transport system K10440 rbsC; ribose transport system permease protein
D SDY_4128 putative ATP-binding protein of ribose ABC transport system K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SDY_4249 yjfF; putative transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D SDY_4248 ytfT; putative transport system permease protein K23509 ytfT; galactofuranose transport system permease protein
D SDY_4247 ytfR; putative ATP-binding component of a transport system K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D SDY_3601 ugpB; sn-glycerol 3-phosphate transport system; periplasmic binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SDY_3600 ugpA; sn-glycerol 3-phosphate transport system, integral membrane protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D SDY_3599 ugpE; sn-glycerol 3-phosphate transport protein, integral membrane protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SDY_0408 ybbM; putative metal resistance protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D SDY_0409 ybbL; putative ATP-binding component of a transport system K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D SDY_3374 yrbD; conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SDY_3375 yrbE; conserved hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SDY_3376 yrbF; putative ATP-binding component of a transport system K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SDY_3373 yrbC; conserved hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SDY_3372 yrbB; conserved hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D SDY_4022 pstS; high-affinity phosphate-specific transport system K02040 pstS; phosphate transport system substrate-binding protein
D SDY_4023 pstC; high-affinity phosphate-specific transport system, cytoplasmic membrane component K02037 pstC; phosphate transport system permease protein
D SDY_4024 pstA; high-affinity phosphate-specific transport system K02038 pstA; phosphate transport system permease protein
D SDY_4025 pstB; ATP-binding component of high-affinity phosphate-specific transport system K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SDY_4112 phnD; periplasmic binding protein component of Pn transporter K02044 phnD; phosphonate transport system substrate-binding protein
D SDY_4113 phnE; membrane channel protein component of Pn transporter K02042 phnE; phosphonate transport system permease protein
D SDY_4111 phnC; ATP-binding component of phosphonate transport K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SDY_2509 argT; lysine-, arginine-, ornithine-binding periplasmic protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D SDY_2506 hisM; histidine transport, membrane protein M K10015 hisM; histidine transport system permease protein
D SDY_2507 hisQ; histidine transport system permease protein K10016 hisQ; histidine transport system permease protein
D SDY_2505 hisP; ATP-binding component of histidine transport K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_2508 hisJ; histidine-binding periplasmic protein of high-affinity histidine transport system K10014 hisJ; histidine transport system substrate-binding protein
D SDY_0785 glnH; periplasmic glutamine-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D SDY_0786 glnP; glutamine high-affinity transport system, membrane component K10037 glnP; glutamine transport system permease protein
D SDY_0787 glnQ; ATP-binding component of glutamine high-affinity transport system K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_2405 artI; arginine 3rd transport system periplasmic binding protein K09997 artI; arginine transport system substrate-binding protein
D SDY_2407 artM; arginine 3rd transport system permease protein K09998 artM; arginine transport system permease protein
D SDY_2406 artQ; arginine 3rd transport system permease protein K09999 artQ; arginine transport system permease protein
D SDY_2404 artP; ATP-binding component of 3rd arginine transport system K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_0592 ybeJ; putative periplasmic binding transport protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SDY_0588 gltK; glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D SDY_3445 yhdW; putative periplasmic binding transport protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D SDY_3447 yhdY; putative transport system permease protein K09971 aapM; general L-amino acid transport system permease protein
D SDY_1097 fliY; putative periplasmic binding transport protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SDY_1099 yecS; putative transport system permease protein K10009 tcyB; L-cystine transport system permease protein
D SDY_1100 yecC; putative ATP-binding component of a transport system K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SDY_3607 livK; high-affinity leucine-specific transport system; periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDY_3611 livJ; high-affinity amino acid transport system periplasmic binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SDY_3606 livH; high-affinity branched-chain amino acid transport system, membrane component K01997 livH; branched-chain amino acid transport system permease protein
D SDY_3605 livM; high-affinity branched-chain amino acid transport K01998 livM; branched-chain amino acid transport system permease protein
D SDY_3604 livG; ATP-binding component of high-affinity branched-chain amino acid transport system K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SDY_3603 livF; ATP-binding component of leucine transport K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SDY_4499 nlpA; lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein
D SDY_0216 yaeC; putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SDY_0217 yaeE; putative transport system permease protein K02072 metI; D-methionine transport system permease protein
D SDY_0218 abc; ATP-binding component of a transporter K02071 metN; D-methionine transport system ATP-binding protein
D SDY_1409 putative transport periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1301 oppA; OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SDY_1302 oppB; oligopeptide transport permease protein K15581 oppB; oligopeptide transport system permease protein
D SDY_1303 oppC; OppC K15582 oppC; oligopeptide transport system permease protein
D SDY_1304 oppD; OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SDY_1305 oppF; OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SDY_4567 dppA; dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D SDY_4566 dppB; dipeptide transport system permease protein 1 K12369 dppB; dipeptide transport system permease protein
D SDY_4565 dppC; dipeptide transport system permease protein 2 K12370 dppC; dipeptide transport system permease protein
D SDY_4564 dppD; putative ATP-binding component of dipeptide transport system K12371 dppD; dipeptide transport system ATP-binding protein
D SDY_4563 dppF; putative ATP-binding component of dipeptide transport system K12372 dppF; dipeptide transport system ATP-binding protein
D SDY_1638 sapA; SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D SDY_1639 sapB; SapB K19227 sapB; cationic peptide transport system permease protein
D SDY_1379 sapC; SapC K19228 sapC; cationic peptide transport system permease protein
D SDY_1378 sapD; putative ATP-binding protein of peptide transport system K19229 sapD; cationic peptide transport system ATP-binding protein
D SDY_1377 sapF; putative ATP-binding protein of peptide transport system K19230 sapF; cationic peptide transport system ATP-binding protein
D SDY_3631 nikA; periplasmic binding protein for nickel K15584 nikA; nickel transport system substrate-binding protein
D SDY_3632 nikB; transport of nickel membrane protein K15585 nikB; nickel transport system permease protein
D SDY_3633 nikC; transport of nickel membrane protein K15586 nikC; nickel transport system permease protein
D SDY_3634 nikD; ATP-binding protein of nickel transport system K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D SDY_3635 nikE; ATP-binding protein of nickel transport system K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D SDY_0757 putative transport protein K13889 gsiB; glutathione transport system substrate-binding protein
D SDY_0756 putative transport system permease protein K13890 gsiC; glutathione transport system permease protein
D SDY_0755 putative transport system permease protein K13891 gsiD; glutathione transport system permease protein
D SDY_0758 putative ATP-binding component of a transport system K13892 gsiA; glutathione transport system ATP-binding protein
D SDY_3217 putative transport periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SDY_1611 putative ATP-binding component of a transport system K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SDY_0902 yejA; conserved hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D SDY_0901 yejB; putative transport system permease protein K13894 yejB; microcin C transport system permease protein
D SDY_0900 yejE; putative transport system permease protein K13895 yejE; microcin C transport system permease protein
D SDY_0899 yejF; putative ATP-binding component of a transport system K13896 yejF; microcin C transport system ATP-binding protein
D SDY_4294 fecD; citrate-dependent iron transporter membrane-bound protein K23182 fecD; ferric citrate transport system permease protein
D SDY_4295 fecC; citrate-dependent iron(III) transport protein cytosolic K23183 fecC; ferric citrate transport system permease protein
D SDY_4293 fecE; ATP-binding component of citrate-dependent iron(III) transport protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D SDY_0168 fhuD; hydroxamate-dependent iron uptake, cytoplasmic membrane component K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D SDY_0169 fhuB; hydroxamate-dependent iron uptake, cytoplasmic membrane component K23228 fhuB; ferric hydroxamate transport system permease protein
D SDY_0167 fhuC; ATP-binding component of hydroxymate-dependent iron transport K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D SDY_3552 shuT; putative periplasmic binding protein K25132 hmuT; heme transport system substrate-binding protein
D SDY_3548 shuU; putative permease of iron compound ABC transport system K25133 hmuU; heme transport system permease protein
D SDY_3547 shuV; putative ATP-binding component of hemin transport system K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D SDY_0523 fepB; ferric enterobactin binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D SDY_0521 fepD; ferric enterobactin transport K23186 fepD; iron-siderophore transport system permease protein
D SDY_0520 fepG; ferric enterobactin transport protein K23187 fepG; iron-siderophore transport system permease protein
D SDY_0519 fepC; ATP-binding component of ferric enterobactin transport K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D SDY_1241 putative iron compound ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D SDY_1240 putative iron compound ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SDY_0174 yadT; conserved hypothetical protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D SDY_1806 btuC; vitamin B12 transport permease protein K06073 btuC; vitamin B12 transport system permease protein
D SDY_1804 btuD; ATP-binding component of vitamin B12 transport system K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D SDY_1144 yebL; putative adhesin K09815 znuA; zinc transport system substrate-binding protein
D SDY_1146 yebI; conserved hypothetical protein K09816 znuB; zinc transport system permease protein
D SDY_1145 yebM; putative ATP-binding component of a transport system K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SDY_1457 sitA; Iron transport protein, periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D SDY_1455 sitC; iron transport protein, inner membrane component K11605 sitC; manganese/iron transport system permease protein
D SDY_1454 sitD; Iron transport protein, inner membrane component K11606 sitD; manganese/iron transport system permease protein
D SDY_1456 sitB; Iron transport protein, ATP-binding component K11607 sitB; manganese/iron transport system ATP-binding protein
D SDY_3153 conserved hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D SDY_3152 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D SDY_3150 hypothetical protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDY_3151 putative ATP-binding protein of ABC transport system K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDY_3149 putative ATP-binding protein of ABC transport system K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SDY_4285 yjgP; conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D SDY_4286 yjgQ; conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D SDY_3382 yhbG; putative ATP-binding component of a transport system K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SDY_0811 ybhR; conserved hypothetical protein K25180 ybhR; drug efflux transport system permease protein
D SDY_0810 ybhS; conserved hypothetical protein K25181 ybhS; drug efflux transport system permease protein
D SDY_0809 ybhF; putative ATP-binding component of a transport system K25182 ybhF; drug efflux transport system ATP-binding protein
D SDY_0808 putative membrane protein K25183 ybhG; membrane fusion protein YbhG
D SDY_2034 ycfU; conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SDY_2032 ycfW; putative kinase K09808 lolC_E; lipoprotein-releasing system permease protein
D SDY_2033 ycfV; putative ATP-binding component of a transport system K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SDY_0880 ccmD; heme exporter protein C K02196 ccmD; heme exporter protein D
D SDY_0879 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D SDY_0878 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D SDY_0877 ccmA; ATP binding protein of heme exporter A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SDY_3613 ftsX; cell division membrane protein K09811 ftsX; cell division transport system permease protein
D SDY_3614 ftsE; ATP-binding component of a membrane-associated complex involved in cell division K09812 ftsE; cell division transport system ATP-binding protein
D SDY_0037 yadH; conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SDY_0036 yadG; putative ATP-binding component of a transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SDY_0405 ybbA; putative ATP-binding component of a transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SDY_1913 ynhD; putative ATP-binding component of a transport system K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SDY_2606 yfeH; putative cytochrome oxidase K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SDY_1890 ydhE; putative transport protein K26939 norM; MATE family, multidrug efflux pump
D SDY_2249 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D SDY_4530 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D SDY_3129 galP; galactose-proton symport of transport system K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D SDY_3058 araE; low-affinity L-arabinose transport system proton symport protein K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D SDY_0909 yeiO; putative transport K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D SDY_3108 nupG; transport of nucleosides K03289 nupG; MFS transporter, NHS family, nucleoside permease
D SDY_2830 kgtP; alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D SDY_4102 proP; proline permease II K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SDY_2254 shiA; putative transport protein, shikimate K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D SDY_3867 Shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D SDY_1582 putative transport protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D SDY_4355 yhjX; putative resistance protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D SDY_3399 nanT; sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D SDY_3278 exuT; transport of hexuronates K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D SDY_1483 putative transport system permease protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D SDY_1689 yeaN; putative amino acid/amine transport protein K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D SDY_2732 hcaT; MFS (major facilitator superfamily) transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D SDY_4147 uhpT; hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D SDY_2435 glpT; sn-glycerol-3-phosphate permease K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D SDY_4148 uhpC; regulator of uhpT K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D SDY_1278 narK; nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SDY_3052 ygeD; putative resistance proteins K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D SDY_0522 ybdA; putative transport K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D SDY_0300 ampG; regulates beta-lactamase synthesis K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SDY_0897 bcr; bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SDY_1375 putative membrane transport protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SDY_4157 emrD; 2-module integral membrane pump K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D SDY_1599 ydeA; putative resistance / regulatory protein K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D SDY_2297 yceE; putative transport protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SDY_4203 yidY; putative transport protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D SDY_4141 yicM; putative transport protein K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump
D SDY_4599 yjiO; putative transport protein K23241 mdtM; MFS transporter, DHA1 family, multidrug resistance protein
D SDY_1883 putative transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D SDY_1976 putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D SDY_2188 yegB; putative transport protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D SDY_2562 emrY; multidrug resistance protein Y K07786 emrY; MFS transporter, DHA2 family, multidrug resistance protein
D SDY_1559 ynfM; putative transport protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D SDY_2363 ycaD; putative transport K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D SDY_3526 yhfC; putative transport K06141 tsgA; MFS transporter, TsgA protein
D SDY_2973 ygcS; putative transport protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D SDY_1492 putative transport protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D SDY_2613 ptsI; PEP-protein phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SDY_3046 ptsP; PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins) K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SDY_2612 ptsH; PTS system protein HPr K02784 ptsH; phosphocarrier protein HPr
D SDY_3387 ptsO; phosphocarrier protein HPr-like NPr K08485 ptsO; phosphocarrier protein NPr
D SDY_3782 ptsA; PEP-protein phosphotransferase system enzyme I K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D SDY_2317 fruB; PTS system, fructose-specific IIA/fpr component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SDY_2614 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SDY_2049 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SDY_0613 nagE; PTS system, N-acetylglucosamine-specific enzyme IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SDY_1842 malX; PTS system, maltose and glucose-specific II ABC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SDY_4259 treB; PTS system enzyme II, trehalose specific K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SDY_2625 putative PTS enzyme II K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D SDY_2315 fruA; PTS system, fructose-specific transport protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SDY_2586 putative PTS system enzyme IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D SDY_3788 frwD; PTS system fructose-like IIB component 2 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D SDY_3785 frwB; PTS system fructose-like IIB component 1 K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D SDY_2585 putative transport protein K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D SDY_3784 frwC; PTS system, fructose-like enzyme II component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D SDY_3143 cmtB; PTS system, mannitol-specific enzyme II component, cryptic K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SDY_3144 cmtA; PTS system, mannitol-specific enzyme II component, cryptic K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SDY_2901 srlB; PTS system, glucitol/sorbitol-specific enzyme IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SDY_2898 srlA; PTS system, glucitol/sorbitol-specific IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SDY_3641 putative phosphotransferase system enzyme subunit K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SDY_2265 gatB; galactitol-specific enzyme IIB of phosphotransferase system K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDY_3642 putative phosphotransferase system enzyme IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SDY_3643 hypothetical protein K02775 gatC; galactitol PTS system EIIC component
D SDY_1963 manX; PTS enzyme IIAB, mannose-specific K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SDY_1965 manZ; PTS enzyme IID, mannose-specific K02796 manZ; mannose PTS system EIID component
D SDY_4315 sorbose-permease PTS system IIC component K02814 sorA; sorbose PTS system EIIC component
D SDY_4316 PTS system, mannose-specific IID component K02815 sorM; sorbose PTS system EIID component
D SDY_4364 ptxA; putative PTS system enzyme II A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SDY_4363 sgaB; conserved hypothetical protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SDY_4362 sgaT; conserved hypothetical protein K03475 ulaA; ascorbate PTS system EIIC component
D SDY_3385 ptsN; phosphotransferase system enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SDY_2388 aqpZ; transmembrane water channel K06188 aqpZ; aquaporin Z
D SDY_3817 glpF; facilitated diffusion of glycerol K02440 glpF; glycerol uptake facilitator
D SDY_1308 kch; putative potassium channel protein K10716 kch; voltage-gated potassium channel
D SDY_0388 amtB; probable ammonium transporter K03320 amt; ammonium transporter, Amt family
D SDY_1858 gst; glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SDY_0838 yliJ; putative transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SDY_3405 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D SDY_0945 yccA; putative carrier/transport protein K19416 yccA; modulator of FtsH protease
D SDY_2357 focA; probable formate transporter K06212 focA; formate transporter
D SDY_2681 focB; probable formate transporter K03459 focB; formate transporter
D SDY_3529 nirC; Nitrite transporter K02598 nirC; nitrite transporter
D SDY_0454 aefA; putative alpha helix protein K05802 mscK; potassium-dependent mechanosensitive channel
D SDY_4433 yjeP; putative periplasmic binding protein K22051 mscM; miniconductance mechanosensitive channel
D SDY_3158 yggB; putative transport protein K03442 mscS; small conductance mechanosensitive channel
D SDY_1410 conserved hypothetical protein K16052 ynaI; MscS family membrane protein
D SDY_0490 ybdG; putative transport K16053 ybdG; miniconductance mechanosensitive channel
D SDY_0485 putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D SDY_1189 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D SDY_0484 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
D SDY_3067 exbB; ExbB K03561 exbB; biopolymer transport protein ExbB
D SDY_3068 exbD; ExbD K03559 exbD; biopolymer transport protein ExbD
D SDY_0685 tolQ; inner membrane protein K03562 tolQ; biopolymer transport protein TolQ
D SDY_0686 tolR; putative inner membrane protein K03560 tolR; biopolymer transport protein TolR
D SDY_3929 corA; Mg2+ transport, system I K03284 corA; magnesium transporter
D SDY_1424 conserved hypothetical protein K16074 zntB; zinc transporter
D SDY_0547 crcB; conserved hypothetical protein K06199 crcB; fluoride exporter
D SDY_4455 ytfL; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SDY_2786 yfjD; Uncharacterized CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SDY_2328 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
D SDY_0861 ompC; outer membrane protein 1b K09475 ompC; outer membrane pore protein C
D SDY_0930 ompA; outer membrane protein 3a K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SDY_0781 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D SDY_2545 fadL; FadL K06076 fadL; long-chain fatty acid transport protein
D SDY_0323 tsx; nucleoside channel K05517 tsx; nucleoside-specific channel-forming protein
D SDY_0151 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_0912 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_4570 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_2287 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D SDY_P214 icsA; IcsA K12679 icsA; outer membrane protein IcsA
D SDY_1022 iroN; TonB-dependent outer membrane siderophore receptor protein K19611 fepA; ferric enterobactin receptor
D SDY_0512 fepA; outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D K19611 fepA; ferric enterobactin receptor
D SDY_0794 putative outer membrane receptor for iron transport K16090 fiu; catecholate siderophore receptor
D SDY_4297 fecA; citrate-dependent iron transport, outer membrane receptor K16091 fecA; Fe(3+) dicitrate transport protein
D SDY_3762 btuB; outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23 K16092 btuB; vitamin B12 transporter
D SDY_2048 fhuE; outer membrane receptor for ferric iron uptake K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D SDY_3554 shuA; outer membrane heme/hemoglobin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SDY_1954 putative outer membrane receptor for iron transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SDY_1235 prrA; putative outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SDY_0166 fhuA; outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SDY_3205 tolC; outer membrane channel K12340 tolC; outer membrane protein
D SDY_0959 yccZ; putative function in exopolysaccharide production K01991 wza; polysaccharide biosynthesis/export protein
D SDY_0193 yaeT; conserved hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D SDY_2708 putative dehydrogenase K17713 bamB; outer membrane protein assembly factor BamB
D SDY_2666 nlpB; lipoprotein-34 K07287 bamC; outer membrane protein assembly factor BamC
D SDY_2838 conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D SDY_2790 smpA; small protein A precursor K06186 bamE; outer membrane protein assembly factor BamE
D SDY_4457 ytfM; conserved hypothetical protein K07278 tamA; translocation and assembly module TamA
D SDY_4458 ytfN; conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D SDY_4034 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D SDY_4033 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D SDY_4035 hypothetical protein K19232 btaE; hyaluronate-binding autotransporter adhesin
D SDY_3381 yhbN; conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D SDY_3380 yrbK; conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D SDY_0079 imp; organic solvent tolerance K04744 lptD; LPS-assembly protein
D SDY_0563 rlpB; minor lipoprotein K03643 lptE; LPS-assembly lipoprotein
D SDY_P166 ipaB; IpaB K13285 sipB; invasin B
D SDY_P164 ipaD; IpaD K13287 sipD; invasin D
D SDY_0594 ybeX; putative transport protein K06189 corC; hemolysin (HlyC) family protein
D SDY_2146 yohJ; conserved hypothetical protein K06518 cidA; holin-like protein
D SDY_1835 uidB; glucuronide permease K16139 uidB; glucuronide carrier protein
D SDY_0489 pheP; phenylalanine-specific transport system K11732 pheP; phenylalanine-specific permease
D SDY_2110 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D SDY_0142 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D SDY_2853 gabP; transport permease protein of gamma-aminobutyrate K11735 gabP; GABA permease
D SDY_0335 proY; proline permease transport protein K11736 proY; proline-specific permease ProY
D SDY_4378 cycA; transporter of D-alanine, D-serine, and glycine K11737 cycA; D-serine/D-alanine/glycine transporter
D SDY_1952 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D SDY_1636 hypothetical protein K14052 puuP; putrescine importer
D SDY_1548 putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D SDY_4098 yjdE; putative amino acid/amine transport protein, cryptic K03759 adiC; arginine:agmatine antiporter
D SDY_1614 xasA; acid sensitivity protein, putative transporter K20265 gadC; glutamate:GABA antiporter
D SDY_4447 yjeH; putative transport K16263 yjeH; amino acid efflux transporter
D SDY_0696 ybgR; putative transport system permease protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SDY_3832 yiiP; putative transport system permease protein K13283 fieF; ferrous-iron efflux pump FieF
D SDY_3200 ygiE; conserved hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D SDY_3537 yhiV; putative transport system permease protein K18899 mdtF; multidrug efflux pump
D SDY_0457 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D SDY_1372 putative multidrug-efflux transport protein K18138 acrB; multidrug efflux pump
D SDY_2654 acrD; AcrD K18324 acrD; multidrug efflux pump
D SDY_4392 sugE; SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D SDY_1554 possible chaperone K11742 mdtI; spermidine export protein MdtI
D SDY_1553 possible chaperone K11743 mdtJ; spermidine export protein MdtJ
D SDY_1594 ydeD; conserved hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D SDY_3839 rhaT; rhamnose transport K02856 rhaT; L-rhamnose-H+ transport protein
D SDY_3924 rarD; conserved hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D SDY_1726 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SDY_1577 conserved hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D SDY_3661 gntT; high-affinity transport of gluconate/gluconate permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D SDY_3587 gntU; H+/gluconate symporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D SDY_3837 kdgT; 2-keto-3-deoxy-D-gluconate transport system K02526 kdgT; 2-keto-3-deoxygluconate permease
D SDY_4443 dcuA; anaerobic dicarboxylate transport K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D SDY_4232 dcuB; anaerobic dicarboxylate transport K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D SDY_4036 lldP; L-lactate permease K00427 lldP; L-lactate permease
D SDY_0062 caiT; probable carnitine transporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter
D SDY_1748 tehA; tellurite resistance protein K03304 tehA; tellurite resistance protein
D SDY_1266 chaA; sodium-calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D SDY_3377 yrbG; conserved hypothetical protein K07301 yrbG; cation:H+ antiporter
D SDY_3086 pitB; low-affinity phosphate transport K16322 pit; low-affinity inorganic phosphate transporter
D SDY_3569 pitA; low-affinity phosphate transport K16322 pit; low-affinity inorganic phosphate transporter
D SDY_3435 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D SDY_0990 putP; major sodium/proline symporter K11928 putP; sodium/proline symporter
D SDY_4548 dctA; uptake of C4-dicarboxylic acids K11103 dctA; aerobic C4-dicarboxylate transport protein
D SDY_3274 ygjU; putative transport protein K07862 sstT; serine/threonine transporter
D SDY_4085 gltS; glutamate transport K03312 gltS; glutamate:Na+ symporter, ESS family
D SDY_0018 nhaA; Na+/H antiporter, pH dependent K03313 nhaA; Na+:H+ antiporter, NhaA family
D SDY_1223 nhaB; Na+/H+ antiporter, pH independent K03314 nhaB; Na+:H+ antiporter, NhaB family
D SDY_4502 yjcE; conserved hypothetical protein K24163 nhaK; monovalent cation/hydrogen antiporter
D SDY_1230 conserved hypothetical protein K11105 cvrA; potassium/hydrogen antiporter
D SDY_0070 kefC; K+ efflux antiporter, glutathione-regulated K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D SDY_0069 yabF; putative NAD(P)H oxidoreductase K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D SDY_3512 kefB; NEM-activable K+/H+ antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D SDY_3513 yheR; putative NAD(P)H oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D SDY_0441 ybaL; putative transport protein K26735 KEA4_5_6; K+:H+ antiporter
D SDY_3896 trkH; potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D SDY_3466 trkA; transport of potassium K03499 trkA; trk/ktr system potassium uptake protein
D SDY_2686 uraA; uracil transport K02824 uraA; uracil permease
D SDY_0981 ycdG; putative transport protein K09016 rutG; putative pyrimidine permease RutG
D SDY_4086 yicE; putative transport protein K16345 xanP; xanthine permease XanP
D SDY_4503 yjcD; conserved hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SDY_4199 yieG; putative membrane/transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SDY_2593 nupC; permease of transport system for 3 nucleosides K11535 nupC; nucleoside transport protein
D SDY_2105 yeiJ; putative transport system permease protein K16325 nupX; nucleoside permease
D SDY_1111 tyrP; tyrosine-specific transport system K03834 tyrP; tyrosine-specific transport protein
D SDY_3340 mtr; tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D SDY_4204 tnaB; low affinity tryptophan permease K03836 tnaB; low affinity tryptophan permease
D SDY_3013 sdaC; probable serine transporter K03837 sdaC; serine transporter
D SDY_3308 tdcC; anaerobically inducible L-threonine, L-serine permease K03838 tdcC; threonine transporter
D SDY_4562 yhjV; putative transporter protein K26603 yhjV; inner membrane transport protein
D SDY_3301 yhaO; putative transport system permease protein K26604 cyuP; cysteine uptake transport protein
D SDY_3247 ygjE; conserved hypothetical protein K11106 ttdT; L-tartrate/succinate antiporter
D SDY_0171 yadQ; putative channel transporter K03281 clcA; chloride channel protein, CIC family
D SDY_1564 putative chloride channel K03281 clcA; chloride channel protein, CIC family
D SDY_1255 ychM; conserved hypothetical protein K03321 TC.SULP; sulfate permease, SulP family
D SDY_2588 putative transport system permease K03322 mntH; manganese transport protein
D SDY_4319 yjbB; putative alpha helix protein K03324 yjbB; phosphate:Na+ symporter
D SDY_3560 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D SDY_3956 wzxE; putative cytochrome K16693 wzxE; enterobacterial common antigen flippase
D SDY_2083 mviN; putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D SDY_2570 putative receptor protein K13936 mdcF; malonate transporter and related proteins
D SDY_4001 kup; low affinity potassium transport system protein K03549 kup; KUP system potassium uptake protein
D SDY_3159 yggA; conserved hypothetical protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SDY_3919 yigK; conserved hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D SDY_3920 yigJ; conserved hypothetical protein K05835 rhtC; threonine efflux protein
D SDY_2821 yfiK; conserved hypothetical protein K11249 eamB; cysteine/O-acetylserine efflux protein
D SDY_1698 yeaS; conserved hypothetical protein K11250 leuE; leucine efflux protein
D SDY_2877 conserved hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D SDY_2878 ygaH; conserved hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D SDY_3416 yhcP; conserved hypothetical protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D SDY_2682 perM; putative permease K03548 perM; putative permease
D SDY_3622 yhhQ; conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D SDY_1598 ydeB; conserved hypothetical protein K05595 marC; multiple antibiotic resistance protein
D SDY_0119 ftsW; FtsW K03588 ftsW; cell division protein FtsW
D SDY_1967 conserved hypothetical protein K23242 mntP; manganese efflux pump family protein
D SDY_2280 yohM; conserved hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D SDY_4607 yjiY; putative carbon starvation protein K23676 btsT; pyruvate/proton symporter
D SDY_1316 tonB; TonB K03832 tonB; periplasmic protein TonB
D SDY_0689 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D SDY_0687 tolA; membrane spanning protein K03646 tolA; colicin import membrane protein
D SDY_0688 tolB; periplasmic protein K03641 tolB; TolB protein
D SDY_1279 narG; nitrate reductase 1, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1280 narH; nitrate reductase 1, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1651 narY; cryptic nitrate reductase 2, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1282 narI; nitrate reductase 1, cytochrome b(NR), gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1653 narV; cryptic nitrate reductase 2, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SDY_1605 fdnH; formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit K08349 fdnH; formate dehydrogenase-N, beta subunit
D SDY_1606 fdnI; formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit K08350 fdnI; formate dehydrogenase-N, gamma subunit
D SDY_1566 putative DMSO reductase anchor subunit K07312 ynfH; Tat-targeted selenate reductase subunit YnfH
D SDY_1567 putative oxidoreductase, Fe-S subunit K07311 ynfG; Tat-targeted selenate reductase subunit YnfG
D SDY_2367 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D SDY_2365 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D SDY_0972 torD; part of trimethylamine-N-oxide oxidoreductase K03533 torD; TorA specific chaperone
D SDY_1171 bisZ; biotin sulfoxide reductase 2 K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D SDY_4352 bisC; biotin sulfoxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D SDY_1898 ydhU; conserved hypothetical protein K08354 phsC; thiosulfate reductase cytochrome b subunit
D SDY_2880 emrA; multidrug resistance secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D SDY_0416 putative membrane spanning export protein K12542 lapC; membrane fusion protein, adhesin transport system
D SDY_3538 yhiU; putative membrane protein K18898 mdtE; membrane fusion protein, multidrug efflux system
D SDY_0456 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SDY_0709 conserved hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D SDY_2383 putative membrane protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D SDY_3417 yhcQ; putative membrane protein K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D SDY_0957 yccC; conserved hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SDY_0695 pnuC; required for NMN transport K03811 pnuC; nicotinamide mononucleotide transporter
D SDY_3668 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D SDY_3667 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D SDY_3666 yhgG; conserved hypothetical protein K07490 feoC; ferrous iron transport protein C
D SDY_0369 sbmA; sensitivity to microcin B17 K17938 sbmA; peptide/bleomycin uptake transporter
D SDY_3568 yhiO; conserved hypothetical protein K06144 uspB; universal stress protein B
D SDY_4391 putative antitoxin of osmotically regulated toxin-antitoxin system associated with programmed cell death K16347 ecnA; entericidin A
D SDY_0882 ccmF; cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D SDY_1038 conserved hypothetical protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D SDY_1127 conserved hypothetical protein K07156 copC; copper resistance protein C
D SDY_1485 yeaF; conserved hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:sdy02044]
D SDY_3205 tolC; outer membrane channel K12340 tolC; outer membrane protein
D SDY_0417 putative cytoplasmic membrane export protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D SDY_0416 putative membrane spanning export protein K12542 lapC; membrane fusion protein, adhesin transport system
D SDY_3092 gspC; putative general secretion protein GspC K02452 gspC; general secretion pathway protein C
D SDY_3093 gspD; putative type II secretion protein K02453 gspD; general secretion pathway protein D
D SDY_3094 gspE; putative type II secretion protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SDY_3095 gspF; putative type II secretion protein K02455 gspF; general secretion pathway protein F
D SDY_3096 gspG; putative type II secretion protein K02456 gspG; general secretion pathway protein G
D SDY_3097 gspH; putative type II secretion protein K02457 gspH; general secretion pathway protein H
D SDY_3098 gspI; putative type II secretion protein K02458 gspI; general secretion pathway protein I
D SDY_3099 gspJ; putative type II secretion protein K02459 gspJ; general secretion pathway protein J
D SDY_3100 gspK; putative type II secretion protein K02460 gspK; general secretion pathway protein K
D SDY_3101 gspL; putative general secretion pathway for protein export (GSP) K02461 gspL; general secretion pathway protein L
D SDY_3102 gspM; putative secretion pathway protein K02462 gspM; general secretion pathway protein M
D SDY_3121 yggR; putative protein transport K02669 pilT; twitching motility protein PilT
D SDY_3043 ppdA; prepilin peptidase dependent protein A K02679 ppdA; prepilin peptidase dependent protein A
D SDY_3042 ppdB; prepilin peptidase dependent protein B K02680 ppdB; prepilin peptidase dependent protein B
D SDY_3040 ppdC; prepilin peptidase dependent protein C K02681 ppdC; prepilin peptidase dependent protein C
D SDY_0138 ppdD; prelipin peptidase dependent protein K02682 ppdD; prepilin peptidase dependent protein D
D SDY_0137 hofB; HofB K02504 hofB; protein transport protein HofB
D SDY_3685 yrfC; conserved hypothetical protein K12289 hofN; pilus assembly protein HofN
D SDY_3686 yrfB; conserved hypothetical protein K12290 hofO; pilus assembly protein HofO
D SDY_3687 yrfA; conserved hypothetical protein K12291 hofP; pilus assembly protein HofP
D SDY_3120 yggT; putative resistance protein K02221 yggT; YggT family protein
D SDY_0290 ybaV; conserved hypothetical protein K02237 comEA; competence protein ComEA
D SDY_2345 ycaI; conserved hypothetical protein K02238 comEC; competence protein ComEC
D SDY_P175 mxiH; MxiH K03221 yscF; type III secretion protein F
D SDY_P190 spa33; Spa33 K03225 yscQ; type III secretion protein Q
D SDY_P185 mxiA; MxiA K03230 yscV; type III secretion protein V
D SDY_P183 mxiD; MxiD K22504 invG; type III secretion system outer membrane ring protein
D SDY_P177 mxiJ; MxiJ K22505 prgK; type III secretion system inner membrane ring protein
D SDY_P187 spa47; Spa47 K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D SDY_P191 spa24; Spa24 K22507 spaP; type III secretion system export apparatus protein
D SDY_P191a spa9; Spa9 K22508 spaQ; type III secretion system export apparatus protein
D SDY_P192 spa29; Spa29 K22509 spaR; type III secretion system export apparatus protein
D SDY_P193 spa40; Spa40 K22510 spaS; type III secretion system export apparatus switch protein
D SDY_P184 mxiC; MxiC K22511 invE; type III secretion system protein
D SDY_P186 spa15; Spa15 K22512 spaK; type III secretion system chaperone
D SDY_P189 spa32; Spa32 K22514 spaN; type III secretion system protein
D SDY_P174 mxiG; MxiG K22488 prgH; type III secretion system protein
D SDY_P176 mxiI; MxiI K22487 prgJ; type III secretion system protein
D SDY_3189 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SDY_P214 icsA; IcsA K12679 icsA; outer membrane protein IcsA
D SDY_0151 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_0912 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_4570 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_2287 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D SDY_2535 yfcS; putative chaperone K12519 papD; chaperone protein PapD
D SDY_0997 csgE; curli production assembly/transport component K04337 csgE; curli production assembly/transport component CsgE
D SDY_0998 csgF; curli production assembly/transport component K04338 csgF; curli production assembly/transport component CsgF
D SDY_0999 csgG; curli production assembly/transport component K06214 csgG; curli production assembly/transport component CsgG
D SDY_0128 secA; preprotein translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SDY_4042 secB; SecB K03071 secB; preprotein translocase subunit SecB
D SDY_0326 secD; SecD K03072 secD; preprotein translocase subunit SecD
D SDY_3747 secE; preprotein translocase K03073 secE; preprotein translocase subunit SecE
D SDY_0325 secF; protein secretion, membrane protein K03074 secF; preprotein translocase subunit SecF
D SDY_3356 secG; protein export - membrane protein K03075 secG; preprotein translocase subunit SecG
D SDY_0127 yacA; conserved hypothetical protein K13301 secM; secretion monitor
D SDY_3476 prlA; putative ATPase subunit of translocase K03076 secY; preprotein translocase subunit SecY
D SDY_2784 ffh; GTP-binding export factor K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SDY_3615 ftsY; cell division membrane protein K03110 ftsY; fused signal recognition particle receptor
D SDY_0327 yajC; conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SDY_4188 yidC; 60 KD inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SDY_3907 conserved hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D SDY_3906 conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D SDY_3905 yigU; conserved hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D SDY_0549 ybeC; conserved hypothetical protein K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:sdy02042]
D SDY_1389 stxA; Shiga toxin subunit A precursor K11006 stxA; shiga toxin subunit A
D SDY_1390 stxB; Shiga toxin subunit B precursor K11007 stxB; shiga toxin subunit B
D SDY_4455 ytfL; putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SDY_2786 yfjD; Uncharacterized CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SDY_3183 putative oxidoreductase K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:sdy02022]
D SDY_0338 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SDY_2023 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SDY_2022 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SDY_3672 envZ; protein histidine kinase/phosphatase sensor for OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SDY_3671 ompR; response regulator affecting transcription of ompC and ompF K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SDY_1825 rstB; sensor histidine protein kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SDY_1824 rstA; response transcriptional regulatory protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D SDY_3835 cpxA; histidine protein kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SDY_3834 cpxR; transcriptional regulator in 2-component system K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SDY_4659 creB; catabolic regulation response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D SDY_2187 baeS; sensor protein for BaeR K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SDY_2186 baeR; transcriptional response regulatory protein K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SDY_4101 basS; sensor protein for basR K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SDY_3213 qseC; quorum sensing Escherichia coli regulator C K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SDY_3214 ygiX; putative 2-component transcriptional regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D SDY_0629 kdpE; regulator of kdp operon K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SDY_0969 torR; response transcriptional regulator for torA K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D SDY_3391 arcB; aerobic respiration sensor-response protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SDY_4662 arcA; negative response regulator of genes in aerobic pathways K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D SDY_1039 yedW; putative 2-component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D SDY_1276 narX; nitrate/nitrate sensor K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SDY_1275 narL; NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D SDY_2653 narQ; sensor for nitrate reductase system K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D SDY_0885 narP; nitrate/nitrite response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D SDY_4149 uhpB; sensor histidine protein kinase phosphorylates UhpA K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D SDY_4150 uhpA; response regulator, positive activator of uhpT transcription K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D SDY_0506 putative response regulator K20264 fusR; two-component system, NarL family, response regulator FusR
D SDY_0856 rcsC; sensor for ctr capsule biosynthesis K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SDY_0858 yojN; putative 2-component sensor protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D SDY_0857 rcsB; positive response regulator for colanic capsule biosynthesis K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SDY_3003 barA; sensor-regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SDY_1104 uvrY; putative 2-component transcriptional regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SDY_4478 evgS; putative sensor for regulator EvgA K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SDY_4477 evgA; putative positive transcription regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D SDY_4238 yjdH; putative 2-component sensor protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D SDY_4237 yjdG; putative 2-component transcriptional regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D SDY_2163 yehU; putative 2-component sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SDY_2579 putative sensor protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SDY_2164 yehT; conserved hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator
D SDY_3874 glnL; histidine protein kinase sensor for GlnG regulator K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SDY_3875 glnG; response regulator for gln K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SDY_3723 hydH; sensor kinase for HydG hydrogenase 3 activity K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D SDY_3722 hydG; sensor HydH response regulator of hydrogenase 3 activity K07713 zraR; two-component system, NtrC family, response regulator HydG
D SDY_2746 yfhK; putative 2-component sensor protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SDY_2744 yfhA; putative 2-component transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SDY_1287 hnr; Hnr protein K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:sdy02035]
D SDY_1760 trg; methyl-accepting chemotaxis protein III K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D SDY_3256 aer; aerotaxis sensor receptor, flavoprotein K03776 aer; aerotaxis receptor
D SDY_1183 flhE; flagellar protein K03516 flhE; flagellar protein FlhE
D SDY_2071 flgI; FlgI K02394 flgI; flagellar P-ring protein FlgI
D SDY_2080 flgA; assembly of basal-body periplasmic P ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SDY_2072 flgH; basal-body outer-membrane L ring protein K02393 flgH; flagellar L-ring protein FlgH
D SDY_2078 flgB; cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D SDY_2077 flgC; cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D SDY_2076 flgD; initiation of hook assembly K02389 flgD; flagellar basal-body rod modification protein FlgD
D SDY_2070 flgJ; FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D SDY_2075 flgE; hook protein K02390 flgE; flagellar hook protein FlgE
D SDY_2068 flgL; hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SDY_1091 fliD; filament capping protein K02407 fliD; flagellar hook-associated protein 2
D SDY_1090 fliS; repressor of class 3a and 3b operons K02422 fliS; flagellar secretion chaperone FliS
D SDY_1191 flhD; regulator of flagellar biosynthesis, acting on class 2 operons K02403 flhD; flagellar transcriptional activator FlhD
D SDY_1190 flhC; regulator of flagellar biosynthesis acting on class 2 operons K02402 flhC; flagellar transcriptional activator FlhC
D SDY_1095 fliA; alternative sigma factor 28 K02405 fliA; RNA polymerase sigma factor FliA
D SDY_0485 putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D SDY_1189 motA; proton conductor component of motor K02556 motA; chemotaxis protein MotA
D SDY_0484 mbhA; putative motility protein K02557 motB; chemotaxis protein MotB
D SDY_1097 fliY; putative periplasmic binding transport protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SDY_1096 fliZ; conserved hypothetical protein K02425 fliZ; regulator of sigma S factor FliZ
D SDY_2081 flgM; anti-FliA factor K02398 flgM; negative regulator of flagellin synthesis FlgM
D SDY_3121 yggR; putative protein transport K02669 pilT; twitching motility protein PilT
D SDY_0151 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_0912 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_4570 hypothetical protein K07347 fimD; outer membrane usher protein
D SDY_2287 yehB; putative outer membrane protein K07347 fimD; outer membrane usher protein
D SDY_0256 sfmC; putative chaperone K07353 sfmC; fimbrial chaperone protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sdy04812]
D SDY_3426 mreB; penicillin binding protein 3 K03569 mreB; rod shape-determining protein MreB and related proteins
D SDY_P092 putative plasmid stable inheritance protein K18640 parM; plasmid segregation protein ParM
D SDY_P075 stbA; plasmid stable inheritance protein K18640 parM; plasmid segregation protein ParM
D SDY_P163 ipaA; IpaA K13284 sipA; invasin A
D SDY_P165 ipaC; IpaC K13286 sipC; invasin C
D SDY_0125 ftsZ; tubulin-like GTP-binding protein and GTPase K03531 ftsZ; cell division protein FtsZ
D SDY_0124 ftsA; ATP-binding cell division protein K03590 ftsA; cell division protein FtsA
D SDY_1207 minC; MinC K03610 minC; septum site-determining protein MinC
D SDY_1206 minD; MinD K03609 minD; septum site-determining protein MinD
D SDY_1205 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D SDY_P031 parA; plasmid segregation protein K03496 parA; chromosome partitioning protein
D SDY_P161 virB; VirB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SDY_P032 parB; plasmid segregation protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sdy04147]
D SDY_0446 htpG; chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D SDY_2996 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SDY_1488 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SDY_3156 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SDY_1905 pykF; pyruvate kinase I, fructose stimulated K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_1141 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SDY_3525 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SDY_4449 mopA; GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SDY_0013 dnaK; chaperone Hsp70 K04043 dnaK; molecular chaperone DnaK
D SDY_4226 pgi; glucosephosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SDY_2704 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SDY_3500 tufA; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SDY_3748 tufB; protein chain elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SDY_2047 ycfF; conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SDY_2606 yfeH; putative cytochrome oxidase K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SDY_1709 fadD; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SDY_0445 adk; Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D SDY_0450 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SDY_3795 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SDY_3351 argG; argininosuccinate synthetase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SDY_4250 fbp; fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SDY_0704 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SDY_3578 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SDY_3818 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SDY_3873 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SDY_0501 hemB; 5-aminolevulinate dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SDY_3169 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SDY_3720 purH; phosphoribosylaminoimidazolecarboxamideformyltra nsferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SDY_0146 lpdA; lipoamide dehydrogenase (NADH) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SDY_0064 fixB; FixB K03522 fixB; electron transfer flavoprotein alpha subunit
D SDY_1138 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SDY_3826 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SDY_0702 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SDY_4393 blc; outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:sdy02048]
D SDY_2953 ygbF; conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D SDY_2955 conserved hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE
D SDY_3692 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SDY_1045 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SDY_4346 yiaZ; Putative membrane permeability altering protein K18920 hokA; protein HokA
D SDY_0015 gef; Gef K18919 hokC_D; protein HokC/D
D SDY_1432 relF; polypeptide destructive to membrane potential K18919 hokC_D; protein HokC/D
D SDY_1265 conserved hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
D SDY_2999 chpA; probable PemK-like growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SDY_3000 chpR; PemI-like suppressor of inhibitory function of ChpA K07172 mazE; antitoxin MazE
D SDY_4461 chpB; probable growth inhibitor, PemK-like, autoregulated K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D SDY_4460 chpS; suppressor of inhibitory function of ChpB, PemI-like, autoregulated K18842 chpS; antitoxin ChpS
D SDY_4255 relB; RelB protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SDY_P073 conserved hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SDY_0251 yafQ; conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D SDY_0252 dinJ; damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D SDY_1736 conserved hypothetical protein K18843 hicB; antitoxin HicB
D SDY_0459 hha; haemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D SDY_P131 hmo; putative regulator K05839 hha; haemolysin expression modulating protein
D SDY_0458 ybaJ; conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB
D SDY_1938 pspC; phage shock protein K03973 pspC; phage shock protein C
D SDY_1939 pspB; phage shock protein K03970 pspB; phage shock protein B
D SDY_P097 ccdB; post-segregation toxin K19163 ccdB; toxin CcdB
D SDY_0073 putative toxin of gyrase inhibiting toxin-antitoxin system K19163 ccdB; toxin CcdB
D SDY_P096 ccdA; post-segregation antitoxin K19164 ccdA; antitoxin CcdA
D SDY_0072 putative antitoxin of gyrase inhibiting toxin-antitoxin system K19164 ccdA; antitoxin CcdA
D SDY_2258 putative plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D SDY_2257 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D SDY_2913 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SDY_3266 ygjM; conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SDY_0435 ybaQ; conserved hypothetical protein K21498 higA-1; antitoxin HigA-1
D SDY_1607 yddM; conserved hypothetical protein K21498 higA-1; antitoxin HigA-1
D SDY_P120 mvpT; plasmid maintenance protein K18829 mvpT; antitoxin VapB
D SDY_4270 yjgK; conserved hypothetical protein K19334 tabA; biofilm protein TabA
D SDY_0791 ybiM; conserved hypothetical protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A
D SDY_2095 yceP; conserved hypothetical protein K12148 bssS; biofilm regulator BssS
D SDY_2038 ycfR; conserved hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D SDY_0125 ftsZ; tubulin-like GTP-binding protein and GTPase K03531 ftsZ; cell division protein FtsZ
D SDY_3426 mreB; penicillin binding protein 3 K03569 mreB; rod shape-determining protein MreB and related proteins
D SDY_3218 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SDY_3210 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SDY_2600 gltX; glutamate tRNA synthetase, catalytic subunit K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SDY_1009 yeeV; conserved hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D SDY_1010 yeeU; putative structural protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D SDY_3186 conserved hypothetical protein K19168 cptA; toxin CptA
D SDY_3185 ygfY; conserved hypothetical protein K09159 cptB; antitoxin CptB
D SDY_2726 yfhO; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:sdy04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:sdy04090]
C 01504 Antimicrobial resistance genes [BR:sdy01504]
D SDY_2023 phoQ; sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SDY_2022 phoP; transcriptional regulatory protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SDY_0456 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SDY_0457 acrB; acridine efflux pump K18138 acrB; multidrug efflux pump
D SDY_1372 putative multidrug-efflux transport protein K18138 acrB; multidrug efflux pump
D SDY_0415 ybbI; putative transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SDY_3205 tolC; outer membrane channel K12340 tolC; outer membrane protein
D SDY_4477 evgA; putative positive transcription regulator K07690 evgA; two-component system, NarL family, response regulator EvgA
D SDY_3538 yhiU; putative membrane protein K18898 mdtE; membrane fusion protein, multidrug efflux system
D SDY_3537 yhiV; putative transport system permease protein K18899 mdtF; multidrug efflux pump
D SDY_1596 marA; MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SDY_2328 ompF; outer membrane protein 1a (Ia;b;F) K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sdy00537]
D SDY_1246 treA; trehalase, periplasmic K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:sdy03200]
D SDY_1915 phage Mu Mom-like protein K21527 mom; Enterobacteriaceae phage adenine modification enzyme [EC:2.3.1.-]
D SDY_1916 putative DNA-invertase K21528 gin; Enterobacteriaceae phage serine recombinase [EC:3.1.22.- 6.5.1.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sdy03100]
D SDY_2595 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_0222 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_3453 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_3892 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SDY_0259 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_0575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_1995 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_1438 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_3951 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2552 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2888 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2890 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_2889 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SDY_1073 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_2250 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_2244 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_2247 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SDY_0225 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDY_3987 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDY_0235 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SDY_1108 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SDY_0603 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDY_0605 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDY_0600 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SDY_2833 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_3759 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_3990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_3718 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SDY_1997 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_3750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_0573 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_1107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_4427 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_4429 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_4428 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SDY_3950 tRNA-His K14226 tRNA-His; tRNA His
D SDY_0221 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDY_3454 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDY_3893 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SDY_3355 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4289 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_0606 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_3949 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4627 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4629 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4628 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_1109 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SDY_4471 pseudogene K14228 tRNA-Leu; tRNA Leu
D SDY_0691 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_0692 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_0693 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_2603 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SDY_0576 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_1994 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_1437 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_0602 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_0607 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3253 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3032 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3033 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3350 tRNA-Met K14230 tRNA-Met; tRNA Met
D SDY_3103 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDY_4439 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SDY_4568 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDY_0890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDY_3948 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SDY_2891 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_1071 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_0946 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_1005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_2378 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SDY_3749 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_3450 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_3752 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_1996 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_0574 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_0472 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SDY_3986 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SDY_1283 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDY_3751 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SDY_2601 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_2602 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_1892 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_1893 tRNA-Val K14237 tRNA-Val; tRNA Val
D SDY_4579 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D SDY_0220 rrsH; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3991 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3760 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_2834 rrsG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3894 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3719 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_3455 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SDY_0223 rrlH; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3717 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3452 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3758 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_2832 rrlG; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3989 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_3891 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SDY_0224 rrfH; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3988 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_2831 rrfG; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3716 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3890 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3757 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3451 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SDY_3449 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SDY_3061 yqhE; conserved hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D SDY_0226 yafB; putative aldose reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D SDY_0531 ybdH; putative oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D SDY_3073 putative reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D SDY_0311 yajO; putative NAD(P)H-dependent xylose reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D SDY_3265 ygjL; putative NADPH dehydrogenase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D SDY_1724 yncB; putative oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D SDY_0061 caiA; probable carnitine operon oxidoreductase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13]
D SDY_2096 solA; sarcosine oxidase-like protein K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D SDY_2968 ygcN; conserved hypothetical protein K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D SDY_1791 ydiS; YdiS K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D SDY_0065 fixC; FixC K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D SDY_4523 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SDY_3212 mdaB; modulator of drug activity B K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D SDY_1775 acpD; acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SDY_0541 ahpF; alkyl hydroperoxide reductase, F52a subunit K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SDY_4456 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SDY_1489 yeaA; conserved hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SDY_3084 conserved hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SDY_2499 yfcG; putative S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SDY_3291 yqjG; putative transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D SDY_1035 putative reductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D SDY_1764 cybB; cytochrome b(561) K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D SDY_2669 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SDY_1402 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SDY_0540 ahpC; alkyl hydroperoxide reductase, C22 subunit K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SDY_1610 osmC; osmotically inducible protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SDY_2629 conserved hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D SDY_3590 yhhW; conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SDY_0795 ybiX; putative enzyme K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D SDY_2742 hmpA; dihydropteridine reductase, ferrisiderophore reductase activity K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D SDY_1706 yeaW; conserved hypothetical protein K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D SDY_1707 yeaX; putative diogenase beta subunit K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D SDY_3254 yqjH; conserved hypothetical protein K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9]
D SDY_1113 ftn; cytoplasmic ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D SDY_0030 yacK; conserved hypothetical protein K14588 cueO; cuproxidase [EC:1.16.3.4]
D SDY_3820 fpr; ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SDY_2908 ygbD; putative oxidoreductase K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
D SDY_3559 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SDY_2684 putative oxidoreductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SDY_4256 nrdG; anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SDY_2359 pflA; pyruvate formate lyase activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SDY_0763 ybiY; putative pyruvate formate-lyase 2 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SDY_3787 pflC; probable pyruvate formate lyase activating enzyme 2 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SDY_2391 putative enzyme K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D SDY_2670 hyfA; hydrogenase 4 Fe-S subunit K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D SDY_2671 hyfB; hydrogenase 4 membrane subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D SDY_2672 hyfC; hydrogenase 4 membrane subunit K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D SDY_2674 hyfE; hydrogenase 4 membrane subunit K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D SDY_2675 hyfF; hydrogenase 4 membrane subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D SDY_2676 hyfG; hydrogenase 4 subunit K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D SDY_2678 hyfI; hydrogenase 4 Fe-S subunit K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D SDY_2679 putative protein processing element K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D SDY_2942 pcm; L-isoaspartate protein carboxylmethyltransferase type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SDY_1887 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SDY_1625 putative enzyme K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D SDY_1747 tehB; tellurite resistance protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D SDY_2303 ymdD; conserved hypothetical protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D SDY_0460 ylaD; putative transferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D SDY_0593 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D SDY_3335 yhbS; conserved hypothetical protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D SDY_4333 yjaB; conserved hypothetical protein K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D SDY_4278 conserved hypothetical protein K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D SDY_1725 putative resistance protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D SDY_2376 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D SDY_1026 iroB; putative glycosyl transferase K23725 iroB; enterobactin C-glucosyltransferase [EC:2.4.1.369]
D SDY_1236 modD; putative molybdenum transport protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D SDY_2826 yfiP; conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D SDY_3045 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SDY_0862 yojL; conserved hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SDY_1797 ydiA; conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SDY_3236 glnE; adenylylating enzyme for glutamine synthetase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D SDY_P034 putative reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D SDY_1692 yeaP; conserved hypothetical protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D SDY_1590 ydeH; conserved hypothetical protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D SDY_4613 mdoB; phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D SDY_4327 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D SDY_2572 putative enzyme K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D SDY_2569 yfdE; putative enzyme K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D SDY_0060 caiB; l-carnitine dehydratase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21]
D SDY_2305 putative polyprotein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D SDY_1023 iroE; putative exported protein K23721 iroE; apo-salmochelin esterase [EC:3.1.1.107]
D SDY_0513 fes; enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D SDY_1024 iroD; putative ferric enterochelin esterase K23723 iroD; iron(III)-salmochelin esterase [EC:3.1.1.109]
D SDY_0684 ybgC; conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SDY_0765 conserved hypothetical protein K07757 ybiV; sugar-phosphatase [EC:3.1.3.23]
D SDY_1334 yciV; putative enzymes K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D SDY_2541 conserved hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D SDY_0903 rtn; conserved hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D SDY_0393 ylaB; conserved hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D SDY_4549 yhjK; conserved hypothetical protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D SDY_4162 yidJ; putative sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D SDY_3127 endA; DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D SDY_4638 yjjV; Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SDY_2050 ycfH; conserved hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SDY_P127 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SDY_0626 ybfF; conserved hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-]
D SDY_0478 yafA; conserved hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D SDY_1394 putative endolysin K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SDY_3263 ygjK; putative isomerase K03931 ygjK; glucosidase [EC:3.2.1.-]
D SDY_3463 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SDY_0548 ybeM; putative amidase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D SDY_3181 yqfB; conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D SDY_4262 yjgF; conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SDY_3237 ygiF; conserved hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D SDY_0383 cof; conserved hypothetical protein K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D SDY_2650 yffH; conserved hypothetical protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D SDY_4002 yieN; putative 2-component regulator K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SDY_0762 mipB; putative transaldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D SDY_3781 talC; putative transaldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-]
D SDY_0058 caiD; carnitine racemase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D SDY_3028 conserved hypothetical protein K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D SDY_3022 fucU; protein of fucose operon K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D SDY_3845 yiiL; conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D SDY_2905 gutQ; conserved hypothetical protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D SDY_0059 caiC; probable crotonobetaine/carnitine-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D SDY_4251 yjfG; putative ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D SDY_3655 yhgKJ; RNA phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
D SDY_1853 ydgO; conserved hypothetical protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D SDY_1852 putative membrane protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D SDY_1851 conserved hypothetical protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D SDY_3620 zntA; zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SDY_4261 mgtA; Mg2+ transport ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D SDY_0162 sfsA; probable regulator for maltose metabolism K06206 sfsA; sugar fermentation stimulation protein A
D SDY_0968 torT; TorT K11930 torT; periplasmic protein TorT
C 99982 Energy metabolism
D SDY_3848 fdhD; affects formate dehydrogenase-N K02379 fdhD; FdhD protein
D SDY_0268 fdrA; multicopy suppressor of dominant negative ftsH mutants K02381 fdrA; FdrA protein
D SDY_2430 yfaE; conserved hypothetical protein K11107 yfaE; ferredoxin
D SDY_1854 conserved hypothetical protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D SDY_1855 ydgQ; conserved hypothetical protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D SDY_1850 conserved hypothetical protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D SDY_4006 mioC; initiation of chromosome replication K06205 mioC; MioC protein
D SDY_3187 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D SDY_2725 conserved hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D SDY_2921 hycB; probable small subunit of hydrogenase-3, iron-sulfur protein K15827 hycB; formate hydrogenlyase subunit 2
D SDY_2919 hycD; membrane-spanning protein of hydrogenase 3 K15829 hycD; formate hydrogenlyase subunit 4
D SDY_2918 hycE; large subunit of hydrogenase 3 K15830 hycE; formate hydrogenlyase subunit 5
D SDY_2917 hycF; probable iron-sulfur protein of hydrogenase 3 K15831 hycF; formate hydrogenlyase subunit 6
D SDY_2907 putative flavodoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D SDY_0871 napD; conserved hypothetical protein K02570 napD; periplasmic nitrate reductase NapD
D SDY_0870 napF; ferredoxin-type protein K02572 napF; ferredoxin-type protein NapF
D SDY_0624 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D SDY_0876 napC; cytochrome c-type protein K02569 napC; cytochrome c-type protein NapC
D SDY_0873 napG; ferredoxin-type protein K02573 napG; ferredoxin-type protein NapG
D SDY_0874 napH; ferredoxin-type protein K02574 napH; ferredoxin-type protein NapH
D SDY_0063 fixA; FixA K03521 fixA; electron transfer flavoprotein beta subunit
D SDY_0066 fixX; putative ferredoxin K03855 fixX; ferredoxin like protein
D SDY_2969 ygcO; conserved hypothetical protein K03855 fixX; ferredoxin like protein
D SDY_1792 ydiT; conserved hypothetical protein K03855 fixX; ferredoxin like protein
D SDY_1899 putative oxidoreductase, Fe-S subunit K04014 nrfC; protein NrfC
C 99983 Lipid metabolism
D SDY_4404 aidB; putative acyl coenzyme A dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D SDY_2867 nrdI; conserved hypothetical protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D SDY_2610 cysZ; required for sulfate transport K06203 cysZ; CysZ protein
D SDY_2636 conserved hypothetical protein K04025 eutK; ethanolamine utilization protein EutK
D SDY_2637 conserved hypothetical protein K04026 eutL; ethanolamine utilization protein EutL
D SDY_0205 yaeR; conserved hypothetical protein K08234 yaeR; glyoxylase I family protein
D SDY_0102 leuL; leu operon leader peptide K05806 leuL; leu operon leader peptide
D SDY_1404 ycjI; putative carboxypeptidase K14054 mpaA; murein peptide amidase A
D SDY_3122 yggS; conserved hypothetical protein K06997 yggS; PLP dependent protein
D SDY_3300 yhaNM; Uncharacterized conserved protein K26607 cyuA; putative L-cysteine desulfidase
C 99986 Glycan metabolism
D SDY_1355 yciS; conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D SDY_1356 yciM; putative heat shock protein K19804 lapB; lipopolysaccharide assembly protein B
D SDY_0815 ybhN; conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D SDY_4552 yhjN; conserved hypothetical protein K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D SDY_3148 yggC; putative kinase K02173 yggC; putative kinase
D SDY_3944 hemY; a late step of protoheme IX synthesis K02498 hemY; HemY protein
D SDY_3908 yigR; conserved hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein
D SDY_3909 yigP; conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D SDY_3227 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D SDY_3336 yhbT; conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D SDY_3889 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D SDY_3220 sufI; suppressor of ftsI K04753 sufI; suppressor of ftsI
C 99999 Others
D SDY_3290 yqjF; conserved hypothetical protein K15977 K15977; putative oxidoreductase
D SDY_2827 yfiQ; conserved hypothetical protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SDY_2903 gutM; glucitol operon activator K02466 gutM; glucitol operon activator protein
D SDY_3415 yhcO; conserved hypothetical protein K03623 yhcO; ribonuclease inhibitor
D SDY_0546 cspE; cold shock protein K03704 cspA; cold shock protein
D SDY_0964 cspH; cold shock-like protein K03704 cspA; cold shock protein
D SDY_1969 cspC; cold shock protein K03704 cspA; cold shock protein
D SDY_2381 cspD; cold shock protein K03704 cspA; cold shock protein
D SDY_4347 cspA; cold shock protein 7.4 K03704 cspA; cold shock protein
D SDY_3311 tdcR; threonine dehydratase operon activator protein K07591 tdcR; threonine dehydratase operon activator protein
D SDY_3731 yjaE; putative transcriptional regulator K07740 rsd; regulator of sigma D
D SDY_2414 putative DNA-binding protein Roi of bacteriophage BP-933W K07741 antB; anti-repressor protein
D SDY_1333 trpL; trp operon leader peptide K07802 trpL; trp operon leader peptide
D SDY_0001 thrL; thr operon leader peptide K08278 thrL; thr operon leader peptide
D SDY_2922 hycA; transcriptional repression of hyc and hyp operons K15833 hycA; formate hydrogenlyase regulatory protein HycA
D SDY_2915 hycH; HycH K15834 hycH; formate hydrogenlyase maturation protein HycH
D SDY_0387 glnK; nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2
D SDY_3669 yhgF; conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D SDY_2380 yljA; conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D SDY_0296 tig; trigger factor K03545 tig; trigger factor
D SDY_1034 conserved hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D SDY_3852 fdhE; affects formate dehydrogenase-N K02380 fdhE; FdhE protein
D SDY_2793 smpB; small protein B K03664 smpB; SsrA-binding protein
D SDY_2925 hypC; pleiotrophic effects on 3 hydrogenase isozymes K04653 hypC; hydrogenase expression/formation protein HypC
D SDY_3083 hybG; hydrogenase-2 operon protein K04653 hypC; hydrogenase expression/formation protein HypC
D SDY_2926 hypD; pleiotrophic effects on 3 hydrogenase isozymes K04654 hypD; hydrogenase expression/formation protein HypD
D SDY_2927 hypE; HypE K04655 hypE; hydrogenase expression/formation protein HypE
D SDY_2909 hypF; transcriptional regulatory protein K04656 hypF; hydrogenase maturation protein HypF
D SDY_2866 nrdH; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D SDY_3518 yhfA; conserved hypothetical protein K07397 yhfA; putative redox protein
D SDY_3662 yhgI; conserved hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
D SDY_1951 putative transferase K11208 yncG; GST-like protein
C 99976 Replication and repair
D SDY_0391 ybaZ; conserved hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D SDY_3015 exo; 5'-3' exonuclease K01146 xni; protein Xni
D SDY_4068 radC; DNA repair protein K03630 radC; DNA repair protein RadC
D SDY_4590 putative DNA repair protein K03630 radC; DNA repair protein RadC
D SDY_1013 Putative radC-like protein yeeS K03630 radC; DNA repair protein RadC
D SDY_3911 yigN; putative alpha helix chain K09760 rmuC; DNA recombination protein RmuC
D SDY_2385 ybjD; conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D SDY_3327 yraN; conserved hypothetical protein K07460 yraN; putative endonuclease
D SDY_3334 yhbQ; conserved hypothetical protein K07461 K07461; putative endonuclease
D SDY_3462 smf; predicted Rossmann-fold nucleotide-binding protein K04096 smf; DNA processing protein
D SDY_0726 putative bacteriophage protein K06909 xtmB; phage terminase large subunit
D SDY_0731 putative bacteriophage protein K06909 xtmB; phage terminase large subunit
D SDY_2369 ycaJ; putative polynucleotide enzyme K07478 ycaJ; putative ATPase
D SDY_3460 yrdD; putative DNA topoisomerase K07479 yrdD; putative DNA topoisomerase
D SDY_1312 DNA invertase-like protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D SDY_0351 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0910 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3881 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0913 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0975 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1182 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1244 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1476 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1769 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2591 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0255 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P098 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1161 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0022 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0044 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0377 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P094 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P212 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P066 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P057 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4623 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4604 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4559 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4489 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4464 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4446 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4435 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4422 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4388 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4384 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4325 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4301 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4281 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4279 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4243 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4235 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4223 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4167 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4135 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3823 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3809 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3799 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3639 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3317 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3182 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3166 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3019 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2986 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2847 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2739 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2693 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2469 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2360 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2267 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2238 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2232 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2175 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1843 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1704 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1680 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1473 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1442 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1407 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1405 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1371 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1296 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1216 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1208 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1185 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1176 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1174 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1115 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1083 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0965 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0886 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0538 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0427 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0301 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0242 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0177 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0157 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0152 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0084 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_PA03 insB; InsB K07480 insB; insertion element IS1 protein InsB
D SDY_4484 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4437 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4375 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4273 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4242 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4233 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4216 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4192 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3869 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3645 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3627 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3608 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3585 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3314 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3302 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3296 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3279 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3230 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3224 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3105 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3071 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3059 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2993 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2957 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2934 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2870 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2849 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2548 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2539 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2442 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2308 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2252 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2125 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2122 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1959 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1822 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1772 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1754 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1744 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1722 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1715 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1592 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1545 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1478 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1470 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1411 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1397 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1365 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1359 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1346 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1337 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1298 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1215 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1200 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1093 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0994 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0976 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0735 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0671 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0669 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0656 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0615 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0544 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0516 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0500 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0476 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0431 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0402 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0272 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0267 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0258 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0236 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0203 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0149 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0105 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0086 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4645 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4506 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4496 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4473 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4452 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4373 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4356 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4190 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4151 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3626 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3583 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3546 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3535 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3293 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3270 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3229 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2975 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2874 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2802 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2797 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2776 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2761 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2695 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2660 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2648 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2567 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2565 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2402 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2314 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2202 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2148 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2141 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2138 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2100 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2098 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2063 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2002 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1983 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1874 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1832 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1815 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1738 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1662 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1635 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1574 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1542 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1512 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1503 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1484 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1468 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1446 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1418 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1369 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1299 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1238 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1203 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1119 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1102 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1081 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1070 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1061 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1054 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1036 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1031 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0805 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0801 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0766 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0653 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0640 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0637 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0617 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0470 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0347 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0261 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0260 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0314 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0343 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0362 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0364 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0372 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0374 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0414 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0465 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0486 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0569 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0716 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0753 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0789 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0818 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0839 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0859 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1000 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1021 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1040 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1055 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1057 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1165 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1201 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1778 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1889 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1919 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1949 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1956 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1971 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2007 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2013 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4030 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4096 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4105 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4107 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4140 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4152 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4163 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4197 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4209 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4241 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4246 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4320 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4331 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4337 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4339 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4386 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4406 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4408 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4424 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4476 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1560 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1580 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1601 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1667 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1693 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1699 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1727 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1759 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1761 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3233 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3244 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3261 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3323 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3441 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3531 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3541 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3558 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3704 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3738 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3767 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3812 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3827 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3853 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3883 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3926 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3927 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3946 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3998 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0023 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0032 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0156 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_0312 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1218 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1251 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1273 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1291 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1324 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1414 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1431 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1440 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1502 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2079 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2087 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2093 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2132 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2134 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2135 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2178 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2235 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2285 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2288 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2318 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2333 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2386 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2400 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2448 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2467 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2553 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2555 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2652 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2698 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2735 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2962 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2983 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3091 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3137 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3142 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3162 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3199 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4487 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4500 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4512 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4537 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4540 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4557 IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4576 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4582 IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4621 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4635 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P005 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P041 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P049 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P078 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P133 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P128 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P047 IS1 ORF, fragment K07480 insB; insertion element IS1 protein InsB
D SDY_1157 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1325 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1429 insB; IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1622 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1642 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1649 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_1781 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_2643 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3638 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_3771 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_4271 iso-IS1 ORF2 K07480 insB; insertion element IS1 protein InsB
D SDY_P149 ISSfl4 ORF1 K07483 K07483; transposase
D SDY_P026 IS3 ORF1 K07483 K07483; transposase
D SDY_4207 IS2 ORF1 K07483 K07483; transposase
D SDY_0819 IS2 ORF1 K07483 K07483; transposase
D SDY_1020 IS2 ORF1 K07483 K07483; transposase
D SDY_1079 IS2 ORF1 K07483 K07483; transposase
D SDY_1163 IS2 ORF1 K07483 K07483; transposase
D SDY_1310 IS2 ORF1 K07483 K07483; transposase
D SDY_1449 IS2 ORF1 K07483 K07483; transposase
D SDY_1646 IS2 ORF1 K07483 K07483; transposase
D SDY_1795 IS2 ORF1 K07483 K07483; transposase
D SDY_2169 IS2 ORF1 K07483 K07483; transposase
D SDY_2229 IS2 ORF1 K07483 K07483; transposase
D SDY_2980 IS2 ORF1 K07483 K07483; transposase
D SDY_3698 IS2 ORF1 K07483 K07483; transposase
D SDY_4572 IS2 ORF1 K07483 K07483; transposase
D SDY_P012 IS2 ORF1 K07483 K07483; transposase
D SDY_P216 IS2 ORF1 K07483 K07483; transposase
D SDY_2589 IS2 ORF1 K07483 K07483; transposase
D SDY_2774 IS2 ORF1 K07483 K07483; transposase
D SDY_2350 IS2 ORF1 K07483 K07483; transposase
D SDY_0349 IS2 ORF1 K07483 K07483; transposase
D SDY_0730 IS2 ORF1 K07483 K07483; transposase
D SDY_2701 IS2 ORF1 K07483 K07483; transposase
D SDY_4584 IS2 ORF1 K07483 K07483; transposase
D SDY_0463 IS2 ORF1 K07483 K07483; transposase
D SDY_0496 IS2 ORF1 K07483 K07483; transposase
D SDY_0510 IS2 ORF1 K07483 K07483; transposase
D SDY_3289 IS2 ORF1 K07483 K07483; transposase
D SDY_P009 IS600 ORF1 K07483 K07483; transposase
D SDY_P048 IS600 ORF1 K07483 K07483; transposase
D SDY_P143 IS600 ORF1 K07483 K07483; transposase
D SDY_P152 IS600 ORF1 K07483 K07483; transposase
D SDY_0835 IS600 ORF1 K07483 K07483; transposase
D SDY_1198 IS600 ORF1 K07483 K07483; transposase
D SDY_1644 IS600 ORF1 K07483 K07483; transposase
D SDY_0770 IS600 ORF1 K07483 K07483; transposase
D SDY_1326 IS600 ORF1 K07483 K07483; transposase
D SDY_1352 IS600 ORF1 K07483 K07483; transposase
D SDY_1444 IS600 ORF1 K07483 K07483; transposase
D SDY_1452 IS600 ORF1 K07483 K07483; transposase
D SDY_1481 IS600 ORF1 K07483 K07483; transposase
D SDY_1678 IS600 ORF1 K07483 K07483; transposase
D SDY_1789 IS600 ORF1 K07483 K07483; transposase
D SDY_1901 IS600 ORF1 K07483 K07483; transposase
D SDY_2008 IS600 ORF1 K07483 K07483; transposase
D SDY_2184 IS600 ORF1 K07483 K07483; transposase
D SDY_2291 IS600 ORF1 K07483 K07483; transposase
D SDY_2411 IS600 ORF1 K07483 K07483; transposase
D SDY_2755 IS600 ORF1 K07483 K07483; transposase
D SDY_2770 IS600 ORF1 K07483 K07483; transposase
D SDY_2819 IS600 ORF1 K07483 K07483; transposase
D SDY_2843 IS600 ORF1 K07483 K07483; transposase
D SDY_2990 IS600 ORF1 K07483 K07483; transposase
D SDY_4195 IS600 ORF1 K07483 K07483; transposase
D SDY_1421 IS600 ORF1 K07483 K07483; transposase
D SDY_0284 IS600 ORF1 K07483 K07483; transposase
D SDY_0590 IS600 ORF1 K07483 K07483; transposase
D SDY_0715 IS600 ORF1 K07483 K07483; transposase
D SDY_0728 IS600 ORF1 K07483 K07483; transposase
D SDY_1123 IS600 ORF1 K07483 K07483; transposase
D SDY_1386 IS600 ORF1 K07483 K07483; transposase
D SDY_1672 IS600 ORF1 K07483 K07483; transposase
D SDY_2930 IS600 ORF1 K07483 K07483; transposase
D SDY_2960 IS600 ORF1 K07483 K07483; transposase
D SDY_3813 IS600 ORF1 K07483 K07483; transposase
D SDY_4089 IS600 ORF1 K07483 K07483; transposase
D SDY_4491 IS600 ORF1 K07483 K07483; transposase
D SDY_4609 IS600 ORF1 K07483 K07483; transposase
D SDY_P079 IS600 ORF1 K07483 K07483; transposase
D SDY_0381 IS600 ORF1 K07483 K07483; transposase
D SDY_0535 IS600 ORF1 K07483 K07483; transposase
D SDY_0585 IS600 ORF1 K07483 K07483; transposase
D SDY_0723 IS600 ORF1 K07483 K07483; transposase
D SDY_0849 IS600 ORF1 K07483 K07483; transposase
D SDY_0868 IS600 ORF1 K07483 K07483; transposase
D SDY_0931 IS600 ORF1 K07483 K07483; transposase
D SDY_1064 IS600 ORF1 K07483 K07483; transposase
D SDY_1068 IS600 ORF1 K07483 K07483; transposase
D SDY_1186 IS600 ORF1 K07483 K07483; transposase
D SDY_1768 IS600 ORF1 K07483 K07483; transposase
D SDY_1785 IS600 ORF1 K07483 K07483; transposase
D SDY_1895 IS600 ORF1 K07483 K07483; transposase
D SDY_1920 IS600 ORF1 K07483 K07483; transposase
D SDY_1999 IS600 ORF1 K07483 K07483; transposase
D SDY_2361 IS600 ORF1 K07483 K07483; transposase
D SDY_2419 IS600 ORF1 K07483 K07483; transposase
D SDY_2987 IS600 ORF1 K07483 K07483; transposase
D SDY_3195 IS600 ORF1 K07483 K07483; transposase
D SDY_4229 IS2 ORF1 K07483 K07483; transposase
D SDY_4274 IS2 ORF1 K07483 K07483; transposase
D SDY_4308 IS2 ORF1 K07483 K07483; transposase
D SDY_4341 IS600 ORF1 K07483 K07483; transposase
D SDY_P116 IS600 ORF1 K07483 K07483; transposase
D SDY_P197 IS3 ORF1 K07483 K07483; transposase
D SDY_1932 IS911 ORF1 K07483 K07483; transposase
D SDY_1991 IS911 ORF1 K07483 K07483; transposase
D SDY_2296 IS911 ORF1 K07483 K07483; transposase
D SDY_0565 IS911 ORF1 K07483 K07483; transposase
D SDY_1030 IS911 ORF1 K07483 K07483; transposase
D SDY_1158 IS911 ORF1 K07483 K07483; transposase
D SDY_1313 IS911 ORF1 K07483 K07483; transposase
D SDY_0586 IS911 ORF1 K07483 K07483; transposase
D SDY_0720 IS911 ORF1 K07483 K07483; transposase
D SDY_0845 IS911 ORF1 K07483 K07483; transposase
D SDY_0722 IS911 ORF1 K07483 K07483; transposase
D SDY_1196 IS911 ORF1 K07483 K07483; transposase
D SDY_0467 IS911 ORF1 K07483 K07483; transposase
D SDY_3862 IS911 ORF1 K07483 K07483; transposase
D SDY_2845 IS911 ORF1 K07483 K07483; transposase
D SDY_4292 IS911 ORF1 K07483 K07483; transposase
D SDY_4495 IS911 ORF1 K07483 K07483; transposase
D SDY_P019 putative IS orf, fragment K07483 K07483; transposase
D SDY_P081 IS2 orf1, fragment K07483 K07483; transposase
D SDY_P111 putative transposase K07483 K07483; transposase
D SDY_2795 IS600 ORF1 K07483 K07483; transposase
D SDY_4479 ISSfl4 ORF3 K07484 K07484; transposase
D SDY_4480 ISSfl4 ORF2 K07484 K07484; transposase
D SDY_4481 ISSfl4 ORF2 K07484 K07484; transposase
D SDY_P020 ISSfl4 ORF2 K07484 K07484; transposase
D SDY_2841 ISSfl4 ORF2 K07484 K07484; transposase
D SDY_P093 putative IS orf, fragment K07484 K07484; transposase
D SDY_P021 putative IS orf, fragment K07484 K07484; transposase
D SDY_P091 putative IS orf, fragment K07484 K07484; transposase
D SDY_P199 putative transposase K07486 K07486; transposase
D SDY_2599 putative transposase TnA K07491 rayT; REP-associated tyrosine transposase
D SDY_0254 yafM; conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D SDY_4474 putative transposase K07493 K07493; putative transposase
D SDY_P060 putative transposase K07493 K07493; putative transposase
D SDY_0793 IS4 ORF K07495 K07495; putative transposase
D SDY_2839 IS4 ORF K07495 K07495; putative transposase
D SDY_4335 IS4 ORF K07495 K07495; putative transposase
D SDY_2352 IS4 ORF K07495 K07495; putative transposase
D SDY_P103 IS4 ORF K07495 K07495; putative transposase
D SDY_0340 IS4 ORF K07495 K07495; putative transposase
D SDY_0440 IS4 ORF K07495 K07495; putative transposase
D SDY_1292 IS4 ORF K07495 K07495; putative transposase
D SDY_3871 IS4 ORF K07495 K07495; putative transposase
D SDY_2769 IS4 ORF K07495 K07495; putative transposase
D SDY_2598 putative virulence protein K07496 K07496; putative transposase
D SDY_1395 IS911 ORF2 K07497 K07497; putative transposase
D SDY_4470 IS911 ORF2 K07497 K07497; putative transposase
D SDY_1992 IS911 ORF2 K07497 K07497; putative transposase
D SDY_0566 IS911 ORF2 K07497 K07497; putative transposase
D SDY_P051 IS629 ORF2 K07497 K07497; putative transposase
D SDY_P062 IS629 ORF2 K07497 K07497; putative transposase
D SDY_3288 IS2 ORF2 K07497 K07497; putative transposase
D SDY_4228 IS2 ORF2 K07497 K07497; putative transposase
D SDY_P215 IS2 ORF2 K07497 K07497; putative transposase
D SDY_0495 IS2 ORF2 K07497 K07497; putative transposase
D SDY_1019 IS2 ORF2 K07497 K07497; putative transposase
D SDY_1078 IS2 ORF2 K07497 K07497; putative transposase
D SDY_1162 IS2 ORF2 K07497 K07497; putative transposase
D SDY_2168 IS2 ORF2 K07497 K07497; putative transposase
D SDY_2979 IS2 ORF2 K07497 K07497; putative transposase
D SDY_3699 IS2 ORF2 K07497 K07497; putative transposase
D SDY_4585 IS2 ORF2 K07497 K07497; putative transposase
D SDY_P027 IS3 ORF2 K07497 K07497; putative transposase
D SDY_P153 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4469 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4485 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0847 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1918 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0536 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1784 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1197 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2961 IS600 ORF2 K07497 K07497; putative transposase
D SDY_3196 IS600 ORF2 K07497 K07497; putative transposase
D SDY_3972 IS2 ORF2 K07497 K07497; putative transposase
D SDY_4205 IS2 ORF2 K07497 K07497; putative transposase
D SDY_4275 IS2 ORF2 K07497 K07497; putative transposase
D SDY_4307 IS2 ORF2 K07497 K07497; putative transposase
D SDY_4342 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4490 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4571 IS2 ORF2 K07497 K07497; putative transposase
D SDY_4574 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4586 IS600 ORF2 K07497 K07497; putative transposase
D SDY_P011 IS2 ORF2 K07497 K07497; putative transposase
D SDY_P035 IS629 ORF2 K07497 K07497; putative transposase
D SDY_2771 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2842 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2929 IS600 ORF2 K07497 K07497; putative transposase
D SDY_P203 IS629 ORF2 K07497 K07497; putative transposase
D SDY_0283 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0350 IS2 ORF2 K07497 K07497; putative transposase
D SDY_0359 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0382 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0464 IS2 ORF2 K07497 K07497; putative transposase
D SDY_0587 IS911 ORF2 K07497 K07497; putative transposase
D SDY_0591 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0724 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0727 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0729 IS2 ORF2 K07497 K07497; putative transposase
D SDY_0769 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0820 IS2 ORF2 K07497 K07497; putative transposase
D SDY_0836 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0846 IS911 ORF2 K07497 K07497; putative transposase
D SDY_0850 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0867 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0932 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1018 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1063 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1069 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1187 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1195 IS911 ORF2 K07497 K07497; putative transposase
D SDY_1311 IS2 ORF2 K07497 K07497; putative transposase
D SDY_1422 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1450 IS2 ORF2 K07497 K07497; putative transposase
D SDY_1460 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1645 IS2 ORF2 K07497 K07497; putative transposase
D SDY_2185 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2228 IS2 ORF2 K07497 K07497; putative transposase
D SDY_2351 IS2 ORF2 K07497 K07497; putative transposase
D SDY_2410 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2418 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2700 IS2 ORF2 K07497 K07497; putative transposase
D SDY_P077 IS600 ORF2 K07497 K07497; putative transposase
D SDY_P115 IS600 ORF2 K07497 K07497; putative transposase
D SDY_P195 IS600 ORF2 K07497 K07497; putative transposase
D SDY_P217 IS629 ORF2 K07497 K07497; putative transposase
D SDY_P008 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2846 hypothetical protein K07497 K07497; putative transposase
D SDY_P196 IS3 ORF2 K07497 K07497; putative transposase
D SDY_P039 IS600 ORF2 K07497 K07497; putative transposase
D SDY_P040 IS600 ORF2 K07497 K07497; putative transposase
D SDY_0714 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1124 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1327 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1351 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1428 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1445 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1451 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1480 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1671 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1767 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1788 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1894 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1921 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1990 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2290 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2310 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2590 IS2 ORF2 K07497 K07497; putative transposase
D SDY_2754 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2775 IS2 ORF2 K07497 K07497; putative transposase
D SDY_2820 IS600 ORF2 K07497 K07497; putative transposase
D SDY_2989 IS600 ORF2 K07497 K07497; putative transposase
D SDY_3814 IS600 ORF2 K07497 K07497; putative transposase
D SDY_3859 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4090 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4194 IS600 ORF2 K07497 K07497; putative transposase
D SDY_4291 IS911 ORF2 K07497 K07497; putative transposase
D SDY_4610 IS600 ORF2 K07497 K07497; putative transposase
D SDY_1391 yjhS; conserved hypothetical protein K07497 K07497; putative transposase
D SDY_1427 hypothetical protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D SDY_1940 pspA; phage shock protein K03969 pspA; phage shock protein A
D SDY_1937 pspD; phage shock protein K03971 pspD; phage shock protein D
D SDY_1936 pspE; phage shock protein K03972 pspE; phage shock protein E
D SDY_0448 ybaB; conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SDY_2551 yfdC; putative transport K21990 yfdC; formate-nitrite transporter family protein
D SDY_3952 yifK; putative amino acid/amine transport protein K03293 TC.AAT; amino acid transporter, AAT family
D SDY_4467 yjdL; putative peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SDY_1857 ydgR; putative transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SDY_3566 yhiP; putative transport protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SDY_0007 yaaJ; inner membrane transport protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SDY_0336 brnQ; branched chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SDY_0748 putative transport protein K07085 K07085; putative transport protein
D SDY_4171 yidE; putative transport protein K07085 K07085; putative transport protein
D SDY_2281 conserved hypothetical protein K23243 rcnB; nickel/cobalt homeostasis protein
C 99978 Cell growth
D SDY_1318 yciB; conserved hypothetical protein K06190 ispZ; intracellular septation protein
D SDY_3623 conserved hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB
D SDY_4379 ytfE; conserved hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D SDY_4046 yibP; putative membrane protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D SDY_2045 ycfM; conserved hypothetical protein K07337 K07337; penicillin-binding protein activator
D SDY_0934 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D SDY_3010 syd; Syd K15723 syd; SecY interacting protein Syd
D SDY_3228 glgS; glycogen biosynthesis protein GlgS K22720 glgS; surface composition regulator
C 99995 Signaling proteins
D SDY_0141 ampE; regulates ampC K03807 ampE; AmpE protein
D SDY_1979 proQ; activator of ProP osmoprotectant transporter K03607 proQ; ProP effector
D SDY_3567 uspA; universal stress protein; broad regulatory function K06149 uspA; universal stress protein A
D SDY_1192 yecG; putative regulator K14064 uspC; universal stress protein C
D SDY_3821 yiiT; putative regulator K14065 uspD; universal stress protein D
D SDY_1413 ydaA; conserved hypothetical protein K14055 uspE; universal stress protein E
D SDY_1458 ynaF; putative filament protein K14061 uspF; universal stress protein F
D SDY_0542 ybdQ; conserved hypothetical protein K11932 uspG; universal stress protein G
D SDY_3872 yihK; putative GTP-binding factor K06207 typA; GTP-binding protein
D SDY_0596 ybeZ; putative ATP-binding protein in pho regulon K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SDY_3238 ygiM; conserved hypothetical protein K07184 ygiM; SH3 domain protein
D SDY_4648 smp; conserved hypothetical protein K07186 smp; membrane protein
D SDY_0304 yajQ; conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
D SDY_4267 yjgI; putative oxidoreductase K19336 bdcA; cyclic-di-GMP-binding biofilm dispersal mediator protein
D SDY_2015 ycgW; conserved hypothetical protein K21638 iraM; anti-adapter protein IraM
D SDY_P194 spa-orf10; conserved hypothetical protein K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance
C 99992 Structural proteins
D SDY_2370 lolA; periplasmic protein effects translocation of lipoproteins from inner membrane to outer K03634 lolA; outer membrane lipoprotein carrier protein
D SDY_1258 hemM; 5-aminolevulinate synthesis enzyme, main pathway, possibly glutamyl-tRNA dehydrogenase K02494 lolB; outer membrane lipoprotein LolB
D SDY_2550 vacJ; lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SDY_3963 wzzE; putative transport protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D SDY_1864 slyB; putative outer membrane protein K06077 slyB; outer membrane lipoprotein SlyB
D SDY_0194 hlpA; histone-like protein K06142 hlpA; outer membrane protein
D SDY_2941 nlpD; lipoprotein K06194 nlpD; lipoprotein NlpD
D SDY_3342 yhbM; putative control proteins K05803 nlpI; lipoprotein NlpI
D SDY_1320 yciD; putative outer membrane protein K07275 ompW; outer membrane protein
D SDY_1710 putative outer membrane protein K07285 slp; outer membrane lipoprotein
D SDY_3557 slp; outer membrane protein induced after carbon starvation K07285 slp; outer membrane lipoprotein
D SDY_0299 yajG; putative polymerase/proteinase K07286 yajG; uncharacterized lipoprotein
D SDY_2198 asmA; suppressor of ompF assembly mutants K07289 asmA; AsmA protein
D SDY_4544 yhjG; conserved hypothetical protein K07290 yhjG; AsmA family protein
D SDY_0411 ybbJ; conserved hypothetical protein K07340 ybbJ; inner membrane protein
D SDY_1552 putative transport protein K11744 tqsA; AI-2 transport protein TqsA
D SDY_1541 osmE; activator of ntrL K04064 osmE; osmotically inducible lipoprotein OsmE
D SDY_0881 ccmE; cytochrome c biogenesis K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D SDY_0884 ccmH; possible subunit of heme lyase K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D SDY_2712 yfgA; putative membrane protein K15539 rodZ; cytoskeleton protein RodZ
D SDY_3418 yhcR; conserved hypothetical protein K21695 aaeX; protein AaeX
D SDY_3542 hdeD; conserved hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D SDY_4026 phoU; negative regulator for pho regulon K02039 phoU; phosphate transport system protein
D SDY_1116 yecI; ferritin-like protein K02255 ftnB; ferritin-like protein 2
D SDY_3499 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D SDY_2302 mdoG; periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D SDY_4442 cutA; divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D SDY_1178 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D SDY_4119 phnK; ATP-binding component of phosphonate transport K05781 phnK; putative phosphonate transport system ATP-binding protein
D SDY_0075 apaG; conserved hypothetical protein K06195 apaG; ApaG protein
D SDY_3938 cyaY; conserved hypothetical protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D SDY_3555 shuS; putative heme/hemoglobin transport protein K07225 hmuS; putative hemin transport protein
D SDY_3550 shuX; conserved hypothetical protein K07227 chuX; heme iron utilization protein
D SDY_1271 ychN; conserved hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SDY_2512 cvpA; membrane protein required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D SDY_3709 bax; putative ATP-binding protein K03796 bax; Bax protein
D SDY_0924 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D SDY_2084 mviM; putative virulence factor K03810 mviM; virulence factor
D SDY_2463 elaA; conserved hypothetical protein K02348 elaA; ElaA protein
D SDY_2829 yfiM; conserved hypothetical protein K05811 yfiM; putative lipoprotein
D SDY_1269 chaB; cation transport regulator K06197 chaB; cation transport regulator
D SDY_4636 osmY; hyperosmotically inducible periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D SDY_1003 ycdX; conserved hypothetical protein K04477 ycdX; putative hydrolase
D SDY_2822 yfiD; putative formate acetyltransferase K06866 grcA; autonomous glycyl radical cofactor
D SDY_3258 ygjH; putative tRNA synthetase K06878 K06878; tRNA-binding protein
D SDY_1286 ychK; conserved hypothetical protein K07001 K07001; NTE family protein
D SDY_0172 yadR; conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D SDY_1912 ynhC; conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D SDY_1821 conserved hypothetical protein K07038 K07038; inner membrane protein
D SDY_3702 yhfV; putative hydrolase K07048 PTER; phosphotriesterase-related protein
D SDY_4542 yhjD; conserved hypothetical protein K07058 K07058; membrane protein
D SDY_3857 rbn; tRNA processing exoribonuclease BN K07058 K07058; membrane protein
D SDY_4445 yjeG; YjeG K07113 fxsA; UPF0716 protein FxsA
D SDY_1910 ynhA; conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D SDY_3029 ygdK; conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D SDY_2292 yceA; conserved hypothetical protein K07146 K07146; UPF0176 protein
D SDY_2020 ycfC; conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D SDY_0057 caiE; carnitine operon protein CaiE K08279 caiE; carnitine operon protein CaiE
D SDY_0266 nfrB; bacteriophage N4 receptor K11740 nfrB; bacteriophage N4 adsorption protein B
D SDY_2299 msyB; acidic protein K12147 msyB; acidic protein MsyB
D SDY_4625 fhuF; conserved hypothetical protein K13255 fhuF; ferric iron reductase protein FhuF
D SDY_3509 slyX; host factor for lysis of phiX174 infection K03745 slyX; SlyX protein
D SDY_3461 smg; conserved hypothetical protein K03747 smg; Smg protein
D SDY_4658 creA; conserved hypothetical protein K05805 creA; CreA protein
D SDY_3128 sprT; conserved hypothetical protein K02742 sprT; SprT protein
D SDY_2513 dedD; putative lipoprotein K03749 dedD; DedD protein
D SDY_3691 damX; putative membrane protein K03112 damX; DamX protein
D SDY_2143 sanA; vancomycin sensitivity K03748 sanA; SanA protein
D SDY_2516 dedA; conserved hypothetical protein K03975 dedA; membrane-associated protein
D SDY_0923 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D SDY_1982 hypothetical protein K03808 pqiA; paraquat-inducible protein A
D SDY_1984 hypothetical protein K03808 pqiA; paraquat-inducible protein A
D SDY_2462 elaB; conserved hypothetical protein K05594 elaB; ElaB protein
D SDY_4160 yidH; conserved hypothetical protein K00389 yidH; putative membrane protein
D SDY_1400 ycjF; conserved hypothetical protein K08990 ycjF; putative membrane protein
D SDY_3617 yhhL; conserved hypothetical protein K08993 yhhL; putative membrane protein
D SDY_1285 ychJ; conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D SDY_0951 hyaE; processor of HyaA and HyaB proteins K03619 hyaE; hydrogenase-1 operon protein HyaE
D SDY_4218 yjbA; conserved hypothetical protein K13256 psiE; protein PsiE
D SDY_0353 aroM; protein of aro operon K14591 aroM; protein AroM
D SDY_4109 phnA; conserved hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D SDY_P010 ospD2; OspD2 K06867 K06867; uncharacterized protein
D SDY_P056 ospD3; OspD3 K06867 K06867; uncharacterized protein
D SDY_4158 yidF; putative transcriptional regulator K06871 K06871; uncharacterized protein
D SDY_2992 conserved hypothetical protein K06872 K06872; uncharacterized protein
D SDY_2995 hypothetical protein K06872 K06872; uncharacterized protein
D SDY_4359 yjfP; conserved hypothetical protein K06889 K06889; uncharacterized protein
D SDY_2730 putative enzyme K06889 K06889; uncharacterized protein
D SDY_0817 ybhL; conserved hypothetical protein K06890 K06890; uncharacterized protein
D SDY_1080 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein
D SDY_1399 ycjX; putative YcjX K06918 K06918; uncharacterized protein
D SDY_0940 conserved hypothetical protein K06929 K06929; uncharacterized protein
D SDY_3154 conserved hypothetical protein K06934 K06934; uncharacterized protein
D SDY_1873 conserved hypothetical protein K06938 K06938; uncharacterized protein
D SDY_1543 kinase fragment K06956 K06956; uncharacterized protein
D SDY_4240 yjdJ; conserved hypothetical protein K06975 K06975; uncharacterized protein
D SDY_3209 yqiA; conserved hypothetical protein K07000 K07000; uncharacterized protein
D SDY_2042 ycfP; conserved hypothetical protein K07000 K07000; uncharacterized protein
D SDY_0891 yejM; putative sulfatase K07014 K07014; uncharacterized protein
D SDY_3515 yheT; conserved hypothetical protein K07019 K07019; uncharacterized protein
D SDY_0010 yaaH; conserved hypothetical protein K07034 K07034; uncharacterized protein
D SDY_1110 yecA; conserved hypothetical protein K07039 K07039; uncharacterized protein
D SDY_3511 conserved hypothetical protein K07070 K07070; uncharacterized protein
D SDY_2501 putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D SDY_2496 yfcE; conserved hypothetical protein K07095 K07095; uncharacterized protein
D SDY_4453 ytfJ; conserved hypothetical protein K07109 K07109; uncharacterized protein
D SDY_1086 yedE; putative transport system permease protein K07112 K07112; uncharacterized protein
D SDY_0650 abrB; putative transport protein K07120 K07120; uncharacterized protein
D SDY_3326 yraM; putative glycosylase K07121 K07121; uncharacterized protein
D SDY_0568 ybeQ; conserved hypothetical protein K07126 K07126; uncharacterized protein
D SDY_1168 yecN; conserved hypothetical protein K07136 K07136; uncharacterized protein
D SDY_3392 yhcC; conserved hypothetical protein K07139 K07139; uncharacterized protein
D SDY_0920 conserved hypothetical protein K07140 K07140; MOSC domain-containing protein
D SDY_2128 yeiB; conserved hypothetical protein K07148 K07148; uncharacterized protein
D SDY_4187 yidD; Uncharacterized conserved protein K08998 K08998; uncharacterized protein
D SDY_3119 yggU; conserved hypothetical protein K09131 K09131; uncharacterized protein
D SDY_0553 ybeD; conserved hypothetical protein K09158 K09158; uncharacterized protein
D SDY_1213 ycgN; conserved hypothetical protein K09160 K09160; uncharacterized protein
D SDY_2490 conserved hypothetical protein K09161 K09161; uncharacterized protein
D SDY_1691 yoaF; conserved hypothetical protein K09712 K09712; uncharacterized protein
D SDY_0357 yaiI; conserved hypothetical protein K09768 K09768; uncharacterized protein
D SDY_1309 yciI; conserved hypothetical protein K09780 K09780; uncharacterized protein
D SDY_1048 yedI; conserved hypothetical protein K09781 K09781; uncharacterized protein
D SDY_0451 ybaN; putative gene 58 K09790 K09790; uncharacterized protein
D SDY_2341 ycaR; conserved hypothetical protein K09791 K09791; uncharacterized protein
D SDY_1752 ydcH; conserved hypothetical protein K09794 K09794; uncharacterized protein
D SDY_4047 yibQ; conserved hypothetical protein K09798 K09798; uncharacterized protein
D SDY_2791 conserved hypothetical protein K09801 K09801; uncharacterized protein
D SDY_2237 yeeX; putative alpha helix protein K09802 K09802; uncharacterized protein
D SDY_3160 yggE; putative actin K09807 K09807; uncharacterized protein
D SDY_P109 virK; VirK K09824 virK; uncharacterized protein
D SDY_2384 ybjX; putative enzyme K09824 virK; uncharacterized protein
D SDY_0925 ymbA; conserved hypothetical protein K09857 K09857; uncharacterized protein
D SDY_0006 yaaA; conserved hypothetical protein K09861 K09861; uncharacterized protein
D SDY_0131 yacG; conserved hypothetical protein K09862 K09862; uncharacterized protein
D SDY_3727 yjaG; conserved hypothetical protein K09891 K09891; uncharacterized protein
D SDY_3877 yihI; conserved hypothetical protein K09894 K09894; uncharacterized protein
D SDY_3172 ygfB; conserved hypothetical protein K09895 K09895; uncharacterized protein
D SDY_3887 yihD; conserved hypothetical protein K09896 K09896; uncharacterized protein
D SDY_3984 yifE; conserved hypothetical protein K09897 K09897; uncharacterized protein
D SDY_3516 yheU; conserved hypothetical protein K09898 K09898; uncharacterized protein
D SDY_2491 conserved hypothetical protein K09899 K09899; uncharacterized protein
D SDY_1306 conserved hypothetical protein K09901 K09901; uncharacterized protein
D SDY_1211 ycgL; conserved hypothetical protein K09902 K09902; uncharacterized protein
D SDY_0892 yejL; conserved hypothetical protein K09904 K09904; uncharacterized protein
D SDY_1179 yecM; conserved hypothetical protein K09907 K09907; uncharacterized protein
D SDY_3409 yhcB; conserved hypothetical protein K09908 K09908; uncharacterized protein
D SDY_0939 conserved hypothetical protein K09909 K09909; uncharacterized protein
D SDY_0026 yacL; conserved hypothetical protein K09910 K09910; uncharacterized protein
D SDY_0929 ycbG; putative dehydrogenase K09911 K09911; uncharacterized protein
D SDY_2085 yceH; conserved hypothetical protein K09915 K09915; uncharacterized protein
D SDY_1490 conserved hypothetical protein K09916 K09916; uncharacterized protein
D SDY_1717 conserved hypothetical protein K09917 K09917; uncharacterized protein
D SDY_1134 yebG; conserved hypothetical protein K09918 K09918; uncharacterized protein
D SDY_3207 yqiB; putative enzyme K09920 K09920; uncharacterized protein
D SDY_3935 yigA; conserved hypothetical protein K09921 K09921; uncharacterized protein
D SDY_3113 yggL; conserved hypothetical protein K09923 K09923; uncharacterized protein
D SDY_2342 ycaQ; conserved hypothetical protein K09927 K09927; uncharacterized protein
D SDY_2421 conserved hypothetical protein K09934 K09934; uncharacterized protein
D SDY_4413 yjeT; conserved hypothetical protein K09937 K09937; uncharacterized protein
D SDY_2607 Z3676 gene product K09954 K09954; uncharacterized protein
D SDY_2119 putative bacteriophage protein K09960 K09960; uncharacterized protein
D SDY_2121 putative bacteriophage protein K09961 K09961; uncharacterized protein
D SDY_0436 ybaP; putative ligase K09973 K09973; uncharacterized protein
D SDY_3779 yijF; conserved hypothetical protein K09974 K09974; uncharacterized protein
D SDY_1535 hypothetical protein K09975 K09975; uncharacterized protein
D SDY_1467 ydbL; YdbL K09978 K09978; uncharacterized protein
D SDY_3333 yhbP; conserved hypothetical protein K09979 K09979; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024