+E Transcription factors KO
#
Transcription Factors - Salmonella enterica subsp. enterica serovar Heidelberg 41578
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D SEEH1578_00440 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SEEH1578_19230 DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D SEEH1578_09545 DNA-binding transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D SEEH1578_14765 HTH-type transcriptional activator rhaR L-rhamnose operon transcriptional activator rhaR K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D SEEH1578_06285 transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D SEEH1578_06280 transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D SEEH1578_15805 DNA-binding transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D SEEH1578_07655 DNA-binding transcriptional activator AdiY K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D SEEH1578_21590 transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D SEEH1578_07490 DNA-binding transcriptional regulator SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SEEH1578_16815 DNA-binding transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SEEH1578_08970 right oriC-binding transcriptional activator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SEEH1578_12335 transposon Tn10 TetD protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D SEEH1578_12245 Transcriptional regulator (AraC/XylS family) protein K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D SEEH1578_07665 DNA-binding transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D SEEH1578_15620 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D SEEH1578_19460 Regulatory protein pocR K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D SEEH1578_02020 HTH-GyrI regulator K13652 K13652; AraC family transcriptional regulator
D SEEH1578_20600 bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D SEEH1578_00970 DNA-binding transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SEEH1578_05655 DNA-binding transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D SEEH1578_05900 DNA-binding transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D SEEH1578_09235 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D SEEH1578_06865 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SEEH1578_01440 chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SEEH1578_09605 leuO; leucine transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D SEEH1578_02370 DNA-binding transcriptional activator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D SEEH1578_12010 DNA-binding transcriptional activator AllS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D SEEH1578_17840 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SEEH1578_05155 DNA-binding transcriptional regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D SEEH1578_12860 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D SEEH1578_11080 Putative LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D SEEH1578_08610 cell density-dependent motility repressor K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D SEEH1578_13205 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D SEEH1578_02935 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D SEEH1578_05600 transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D SEEH1578_13720 DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SEEH1578_05120 Deoxyribose operon repressor, DeoR family protein K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SEEH1578_03690 DNA-binding transcriptional repressor GlpR K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SEEH1578_02430 galactitol utilization operon repressor K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D SEEH1578_01255 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D SEEH1578_00955 DNA-binding transcriptional activator FucR K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D SEEH1578_22985 srlR; DNA-binding transcriptional repressor SrlR K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D SEEH1578_08075 transcriptional repressor UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D SEEH1578_06150 putative HTH-type transcriptional regulator yihW K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D SEEH1578_04395 xylose operon transcriptional activator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SEEH1578_01110 DNA-binding transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SEEH1578_20230 DNA-binding transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SEEH1578_05585 transcriptional repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SEEH1578_17015 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SEEH1578_06735 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D SEEH1578_09620 DNA-binding transcriptional regulator FruR K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SEEH1578_08340 treR; trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D SEEH1578_16375 DNA-binding transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D SEEH1578_03795 gluconate operon transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SEEH1578_04565 LacI family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SEEH1578_08470 DNA-binding transcriptional regulator IdnR K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
C GntR family
D SEEH1578_13340 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D SEEH1578_04080 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SEEH1578_18285 fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D SEEH1578_09795 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SEEH1578_08590 DNA-binding transcriptional repressor UxuR K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D SEEH1578_16920 putative regulatory protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D SEEH1578_04550 DNA-binding transcriptional repressor LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D SEEH1578_05320 Transcriptional regulator nanR K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D SEEH1578_02805 transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D SEEH1578_22830 GntR family transcriptional regulator domain / Aspartate aminotransferase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SEEH1578_17185 colanic acid/biofilm transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
D SEEH1578_22780 DNA-binding transcriptional regulator CsiR K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D SEEH1578_16770 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
C TetR/AcrR family
D SEEH1578_00490 tetracycline repressor protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D SEEH1578_11810 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D SEEH1578_04745 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator
D SEEH1578_14830 HTH-type transcriptional regulator RutR K09017 rutR; TetR/AcrR family transcriptional regulator
D SEEH1578_16415 transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SEEH1578_03045 DNA-binding transcriptional regulator EnvR K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D SEEH1578_17630 TetR family transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D SEEH1578_15300 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D SEEH1578_06875 DNA-binding transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D SEEH1578_13490 DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D SEEH1578_13745 TetR/DeoR Transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D SEEH1578_05535 DNA-binding transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D SEEH1578_14000 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SEEH1578_11725 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D SEEH1578_19030 DNA-binding transcriptional activator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D SEEH1578_19185 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SEEH1578_14940 DNA-binding transcriptional regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D SEEH1578_08795 DNA-binding transcriptional activator BglJ K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D SEEH1578_03655 transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D SEEH1578_16820 DNA-binding transcriptional repressor MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D SEEH1578_16450 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SEEH1578_22880 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D SEEH1578_23410 transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
D SEEH1578_11935 DNA-binding transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SEEH1578_03135 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D SEEH1578_07495 redox-sensitivie transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D SEEH1578_11185 MerR family transcriptional regulator K19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes
D SEEH1578_20075 transcriptional regulator MirA K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
C Fur family
D SEEH1578_12865 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SEEH1578_07375 zinc uptake transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D SEEH1578_07095 transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D SEEH1578_12020 DNA-binding transcriptional repressor AllR K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D SEEH1578_18470 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D SEEH1578_04420 HTH-type transcriptional regulator yiaJ YiaKLMNOPQRS operon repressor, YiaK-S operon repressor K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D SEEH1578_03415 DNA-binding transcriptional dual regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SEEH1578_17560 fumarate/nitrate reduction transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D SEEH1578_22040 DNA-binding transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D SEEH1578_08005 transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D SEEH1578_01290 DNA-binding transcriptional repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D SEEH1578_17270 Transcriptional regulator yidN, Cro/CI family protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D SEEH1578_13575 manganese transport regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D SEEH1578_18745 DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D SEEH1578_06905 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SEEH1578_03025 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SEEH1578_08955 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D SEEH1578_11255 propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D SEEH1578_22545 Ner-like regulatory protein K07724 ner; Ner family transcriptional regulator
D SEEH1578_02635 DNA-binding transcriptional regulator Nlp K07724 ner; Ner family transcriptional regulator
D SEEH1578_09570 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D SEEH1578_05455 putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component K11925 sgrR; SgrR family transcriptional regulator
D SEEH1578_08940 bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SEEH1578_06175 HTH 19 Helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SEEH1578_05015 Sigma-54 interaction ntrC like regulator K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
D SEEH1578_08725 Transcriptional regulatory protein levR K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D SEEH1578_22995 anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D SEEH1578_23095 formate hydrogenlyase transcriptional activator FhlA K15836 fhlA; formate hydrogenlyase transcriptional activator
D SEEH1578_10170 carbohydrate diacid transcriptional activator CdaR K02647 cdaR; carbohydrate diacid regulator
D SEEH1578_21080 sigma(54)-Dependent Activator K06714 rocR; arginine utilization regulatory protein
D SEEH1578_13285 DNA-binding transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein
D SEEH1578_04325 transcriptional regulator K07726 K07726; putative transcriptional regulator
D SEEH1578_05040 DNA-binding protein K07726 K07726; putative transcriptional regulator
D SEEH1578_06195 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D SEEH1578_03990 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D SEEH1578_06770 transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D SEEH1578_14840 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SEEH1578_08310 bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
C Others
D SEEH1578_17385 Transcriptional repressor frmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D SEEH1578_01170 transcriptional repressor RcnR to maintain nickel and cobalt homeostasis K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D SEEH1578_11660 transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SEEH1578_00220 ParB-like partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SEEH1578_05970 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D SEEH1578_02900 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SEEH1578_12810 DNA-binding transcriptional dual regulator NagC K02565 nagC; N-acetylglucosamine repressor
D SEEH1578_16660 DNA-binding transcriptional repressor DgsA K15545 mlc; transcriptional regulator of PTS gene
D SEEH1578_04520 mtlR; mannitol repressor protein K02562 mtlR; mannitol operon repressor
D SEEH1578_17680 DNA-binding transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D SEEH1578_22110 DNA-binding transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D SEEH1578_23185 invasion protein regulator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D SEEH1578_21765 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D SEEH1578_17720 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D SEEH1578_17705 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C
D SEEH1578_06625 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor
D SEEH1578_12510 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D SEEH1578_04875 prophage regulatory protein K07733 alpA; prophage regulatory protein
D SEEH1578_21295 Phage AlpA Prophage CP4-57 regulatory protein (AlpA) K07733 alpA; prophage regulatory protein
D SEEH1578_01605 hypothetical protein K07735 algH; putative transcriptional regulator
D SEEH1578_09370 DNA-binding transcriptional activator CaiF K08277 caiF; transcriptional activator CaiF
D SEEH1578_10045 dksA; RNA polymerase-binding transcription factor K06204 dksA; RNA polymerase-binding transcription factor
D SEEH1578_11505 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D SEEH1578_10700 DNA-binding transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
D SEEH1578_03685 transcriptional regulatory protein RtcR K14414 rtcR; transcriptional regulatory protein RtcR
D SEEH1578_10825 regulatory protein cro (Antirepressor) K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D SEEH1578_09625 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
D SEEH1578_12185 regulator of fimbriae expression FimY K08088 fimY; fimbrial regulator
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
#
Classification taken and modified from TRANSFAC 7.0