+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D SPUL_1879 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E SPUL_0292 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D SPUL_0903 putative DNA-binding protein (histone-like protein hlp-II) K03746 hns; DNA-binding protein H-NS D SPUL_1565 hns; H-ns protein (histone-like protein Hlp-II) K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D SPUL_3414 hupA; histone like DNA-binding protein HU-alpha (NS2) (HU-2) K05787 hupA; DNA-binding protein HU-alpha D SPUL_2514 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D SPUL_1155 himA; Integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D SPUL_2025 himD; integration host factor beta-subunit (IHF-beta) K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D SPUL_1945 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D SPUL_1946 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D SPUL_4574 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SPUL_3728 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D SPUL_3275 yraO; putative phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D SPUL_1976 hypothetical protein K11940 hspQ; heat shock protein HspQ D SPUL_2142 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D SPUL_3395 fis; Fis DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D SPUL_4351 hfq; host factor-I protein(HF-I) K03666 hfq; host factor-I protein D SPUL_3064 iciA; Chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D SPUL_2048 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SPUL_0658 yejK; nucleoid-asociated protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D SPUL_2013 mukB; cell division protein K03632 mukB; chromosome partition protein MukB D SPUL_2014 mukE; KicA protein K03804 mukE; chromosome partition protein MukE D SPUL_2015 mukF; killing factor KicB K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D SPUL_0140 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D SPUL_2930 ygbQ; putative cell division protein FtsB K05589 ftsB; cell division protein FtsB D SPUL_4007 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D SPUL_0130 ftsI; penicillin-binding protein 3 precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SPUL_1653 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SPUL_2047 ftsK; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D SPUL_0129 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D SPUL_3569 ftsN; cell division protein K03591 ftsN; cell division protein FtsN D SPUL_0139 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D SPUL_0135 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D SPUL_4008 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein D SPUL_0141 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SPUL_0454 zipA; cell division protein K03528 zipA; cell division protein ZipA D SPUL_3060 hypothetical protein K09888 zapA; cell division protein ZapA D SPUL_3575 hypothetical protein K09892 zapB; cell division protein ZapB D SPUL_1996 hypothetical protein K18657 zapC; cell division protein ZapC D SPUL_0149 hypothetical protein K18778 zapD; cell division protein ZapD D SPUL_4386 hypothetical protein K07269 ytfB; cell division protein YtfB D SPUL_0430 amiA; putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SPUL_2999 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SPUL_4348 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D SPUL_2488 acrA; acriflavin resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D SPUL_1631 minC; septum site-determining protein K03610 minC; septum site-determining protein MinC D SPUL_1632 minD; septum site determining protein K03609 minD; septum site-determining protein MinD D SPUL_1633 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor D SPUL_1984 sulA; cell division inhibitor K13053 sulA; cell division inhibitor SulA D SPUL_3832 ttk; putative TetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D SPUL_2266 seqA; seqA protein K03645 seqA; negative modulator of initiation of replication D SPUL_3384 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D SPUL_3383 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC D SPUL_3382 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD D SPUL_2322 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D SPUL_3183 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D SPUL_3192 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SPUL_3693 gidA; glucose inhibited division protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SPUL_3694 gidB; glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SPUL_3483 xerC; integrase/recombinase K03733 xerC; integrase/recombinase XerC D SPUL_3043 xerD; site-specific integrase/recombinase K04763 xerD; integrase/recombinase XerD D SPUL_0737 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D SPUL_4111 fic; cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D SPUL_3670 yihA; ATP/GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024