+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Salmonella enterica subsp. enterica serovar Typhimurium 14028S

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D STM14_2414 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E STM14_3161 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Gypsy chromatin insulator complex C Other centrosome associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D STM14_2116 hns; global DNA-binding transcriptional dual regulator H-NS K03746 hns; DNA-binding protein H-NS D STM14_3377 stpA; DNA binding protein, nucleoid-associated K11685 stpA; DNA-binding protein StpA C HU (heat unstable protein) D STM14_5011 hupA; transcriptional regulator HU subunit alpha K05787 hupA; DNA-binding protein HU-alpha D STM14_0534 hupB; transcriptional regulator HU subunit beta K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D STM14_1626 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D STM14_1111 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D STM14_1264 cbpA; curved DNA-binding protein CbpA K05516 cbpA; curved DNA-binding protein D STM14_1263 yccD; chaperone-modulator protein CbpM K18997 cbpM; chaperone modulatory protein CbpM D STM14_5507 rob; transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D STM14_4632 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D STM14_3948 yraO; DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein D STM14_1224 yccV; putative inner membrane protein K11940 hspQ; heat shock protein HspQ D STM14_966 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein D STM14_4083 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D STM14_5242 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein D STM14_3703 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D STM14_1083 lrp; leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D STM14_2752 yejK; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D STM14_1124 mukB; cell division protein MukB K03632 mukB; chromosome partition protein MukB D STM14_1123 mukE; condesin subunit E K03804 mukE; chromosome partition protein MukE D STM14_1122 mukF; condesin subunit F K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D STM14_0158 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D STM14_3534 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D STM14_4298 ftsE; cell division protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D STM14_0148 ftsI; division specific transpeptidase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D STM14_2218 putative penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D STM14_1084 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D STM14_0147 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D STM14_4921 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN D STM14_0157 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D STM14_0153 ftsW; cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D STM14_4297 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D STM14_0159 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D STM14_2983 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D STM14_3697 ygfE; Z-ring-associated protein K09888 zapA; cell division protein ZapA D STM14_4915 yiiU; putative cytoplasmic protein K09892 zapB; cell division protein ZapB D STM14_1202 ycbW; putative cytoplasmic protein K18657 zapC; cell division protein ZapC D STM14_0167 yacF; hypothetical protein K18778 zapD; cell division protein ZapD D STM14_4038 yhcM; putative ATPase K06916 zapE; cell division protein ZapE D STM14_5280 ytfB; putative cell envelope opacity-associated protein A K07269 ytfB; cell division protein YtfB D STM14_3008 amiA; N-acetylmuramoyl-l-alanine amidase I K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D STM14_3606 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D STM14_5239 amiB; N-acetylmuramoyl-l-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D STM14_0560 acrA; acridine efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D STM14_2193 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC D STM14_2194 minD; cell division inhibitor MinD K03609 minD; septum site-determining protein MinD D STM14_2195 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D STM14_1215 sulA; SOS cell division inhibitor K13053 sulA; cell division inhibitor SulA D STM14_4494 slmA; nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D STM14_0814 seqA; replication initiation regulator SeqA K03645 seqA; negative modulator of initiation of replication D STM14_4068 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D STM14_4067 mreC; cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC D STM14_4066 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D STM14_0747 mrdB; cell wall shape-determining protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D STM14_3218 chromosome partitioning ATPase K03496 parA; chromosome partitioning protein D STM14_5575 parA; plasmid partition protein A K03496 parA; chromosome partitioning protein D STM14_5576 parB; plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D STM14_5589 putative ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D STM14_3846 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D STM14_3854 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D STM14_4671 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D STM14_4670 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D STM14_4750 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D STM14_3676 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D STM14_2657 mrp; putative ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning D STM14_4177 fic; cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D STM14_4812 yihA; GTPase EngB K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2025