+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Streptococcus equinus

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D A6J79_09155 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C A6J79_06075 GTPase Era K03595 era; GTPase C A6J79_00025 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C A6J79_04585 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA C A6J79_01510 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C A6J79_04025 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D A6J79_00035 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D A6J79_05705 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D A6J79_01800 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D A6J79_09995 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D A6J79_08830 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D A6J79_01045 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D A6J79_03740 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A6J79_04450 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A6J79_01290 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D A6J79_05405 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D A6J79_05565 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D A6J79_07260 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D A6J79_02105 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D A6J79_03465 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A6J79_02900 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D A6J79_06165 RlmI/RlmK family 23S rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D A6J79_01245 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D A6J79_07260 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D A6J79_06240 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D A6J79_04280 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A6J79_04005 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A6J79_05530 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A6J79_10085 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A6J79_00310 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] B ribosomal protein modification factors C A6J79_01695 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C A6J79_08625 RimJ/RimL family protein N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C A6J79_09950 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM C A6J79_03735 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C A6J79_09155 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C A6J79_02605 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C A6J79_03455 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C A6J79_00490 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C A6J79_01270 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C A6J79_06075 GTPase Era K03595 era; GTPase C A6J79_01790 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C A6J79_04485 ribosome biogenesis GTPase Der K03977 engA; GTPase C A6J79_00025 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] C A6J79_08585 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A C A6J79_07180 hflX; GTPase HflX K03665 hflX; GTPase C A6J79_00855 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C A6J79_09000 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C A6J79_03755 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C A6J79_04605 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A C A6J79_04580 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C A6J79_02840 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein C A6J79_00830 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein C A6J79_06065 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor C A6J79_00850 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein C A6J79_04725 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor C A6J79_02930 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C A6J79_04455 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024