+D GENES KO #

  KEGG Orthology (KO) - Serratia sp. MYb239

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:serm00010] D CLM71_16850 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLM71_21640 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_01900 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CLM71_23015 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CLM71_17520 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CLM71_19170 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_12385 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_23040 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLM71_12865 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_12010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_19175 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLM71_05910 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_03050 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_00555 alpha-ribazole phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_23105 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLM71_03675 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLM71_13045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_10640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_10560 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLM71_19555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLM71_19550 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_11130 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLM71_07140 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLM71_12740 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CLM71_21635 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLM71_17955 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CLM71_21465 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLM71_11835 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLM71_13325 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D CLM71_09740 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D CLM71_01510 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLM71_05920 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CLM71_15315 bifunctional glucose-1-phosphatase/inositol phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D CLM71_23380 glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D CLM71_05645 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLM71_12870 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D CLM71_22310 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_09545 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_22180 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_18775 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_02500 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_15260 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_15280 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_17075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLM71_09120 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CLM71_12345 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CLM71_05310 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:serm00020] D CLM71_05745 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CLM71_12525 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLM71_19540 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLM71_09305 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLM71_05770 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CLM71_05775 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_05785 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLM71_05780 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLM71_05760 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_05765 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_05750 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLM71_05755 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLM71_01645 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_01640 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_01635 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CLM71_01630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CLM71_19605 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CLM71_12310 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CLM71_01925 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CLM71_07045 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CLM71_22310 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_09545 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_19555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLM71_19550 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CLM71_11130 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:serm00030] D CLM71_21640 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLM71_13035 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CLM71_05975 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D CLM71_21155 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D CLM71_07410 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CLM71_22230 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLM71_19865 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_19870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_17215 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_12135 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_12140 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_16435 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_16440 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_19190 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_03105 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLM71_17210 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLM71_19145 ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CLM71_17205 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CLM71_02965 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CLM71_07535 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CLM71_23510 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CLM71_02975 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CLM71_05645 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLM71_02195 ribose 1,5-bisphosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D CLM71_13300 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLM71_22055 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLM71_21690 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D CLM71_13030 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CLM71_21695 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CLM71_09485 choline dehydrogenase K19813 gdh; glucose dehydrogenase [EC:1.1.5.9] D CLM71_11780 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D CLM71_06750 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D CLM71_21495 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D CLM71_09735 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D CLM71_06745 hypothetical protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D CLM71_21490 gluconate 2-dehydrogenase K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D CLM71_09730 gluconate 2-dehydrogenase K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D CLM71_00100 glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CLM71_21680 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CLM71_22455 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CLM71_00110 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D CLM71_22745 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D CLM71_17520 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CLM71_19170 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_12385 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_01900 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CLM71_23015 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:serm00040] D CLM71_13400 cupin K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D CLM71_09670 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D CLM71_09665 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D CLM71_20815 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D CLM71_20810 altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D CLM71_15910 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D CLM71_17495 bifunctional D-altronate/D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D CLM71_15915 fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D CLM71_17500 Zn-dependent oxidoreductase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D CLM71_12760 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLM71_12765 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07255 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07260 GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_12480 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CLM71_22230 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLM71_12460 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D CLM71_12450 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D CLM71_04270 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D CLM71_00310 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D CLM71_00315 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D CLM71_04265 D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D CLM71_19785 dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D CLM71_19780 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLM71_08465 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLM71_21520 ribulokinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] D CLM71_21525 glucose dehydrogenase K00039 rbtD; ribitol 2-dehydrogenase [EC:1.1.1.56] C 00051 Fructose and mannose metabolism [PATH:serm00051] D CLM71_04695 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLM71_20380 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLM71_12315 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLM71_07375 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D CLM71_07370 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLM71_02850 short-chain dehydrogenase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435] D CLM71_02845 amidohydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D CLM71_02840 fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68] D CLM71_02830 NAD(P)-dependent oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434] D CLM71_02835 ureidoglycolate lyase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D CLM71_11355 mannosyl-3-phosphoglycerate phosphatase-related protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_01900 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CLM71_23015 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CLM71_00170 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D CLM71_15870 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CLM71_00315 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D CLM71_04265 D-arabinitol 4-dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11] D CLM71_17520 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CLM71_19170 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_12385 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_23040 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLM71_17205 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CLM71_15865 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLM71_13610 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLM71_13615 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CLM71_13620 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CLM71_00165 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CLM71_16405 sugar phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D CLM71_09675 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] C 00052 Galactose metabolism [PATH:serm00052] D CLM71_05920 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CLM71_05925 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CLM71_05930 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CLM71_07365 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLM71_12765 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07255 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07260 GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_05645 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLM71_16850 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLM71_04525 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CLM71_03180 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_13355 tagatose bisphosphate family class II aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D CLM71_13385 tagatose-bisphosphate aldolase K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D CLM71_00060 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D CLM71_00050 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D CLM71_15650 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D CLM71_00055 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D CLM71_15655 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D CLM71_20395 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CLM71_09465 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CLM71_04750 maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CLM71_17745 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CLM71_13365 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CLM71_13380 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CLM71_13375 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CLM71_13370 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D CLM71_13360 aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism [PATH:serm00053] D CLM71_12760 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLM71_12755 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D CLM71_06460 galactonate oxidoreductase K23007 lgoD; L-galactonate 5-dehydrogenase [EC:1.1.1.414] D CLM71_16455 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLM71_12395 PTS fructose transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLM71_16450 PTS mannitol transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLM71_12375 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLM71_16445 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CLM71_12380 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CLM71_12480 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CLM71_03630 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D CLM71_03635 2-dehydro-3-deoxyglucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D CLM71_17685 gluconolaconase K13874 araB; L-arabinonolactonase [EC:3.1.1.15] D CLM71_19780 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLM71_08465 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLM71_03615 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] D CLM71_00560 epimerase K18981 udh; uronate dehydrogenase [EC:1.1.1.203] C 00500 Starch and sucrose metabolism [PATH:serm00500] D CLM71_20390 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLM71_17965 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLM71_20395 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CLM71_09465 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CLM71_04750 maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CLM71_17745 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CLM71_12765 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07255 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07260 GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_06320 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CLM71_00650 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D CLM71_18785 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_22175 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_15275 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_18770 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_22165 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_15290 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_18780 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_22170 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_15285 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_22180 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_18775 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_02500 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_15260 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_15280 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CLM71_22390 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CLM71_22385 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CLM71_17075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLM71_12345 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CLM71_02610 glycosyl transferase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CLM71_02260 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CLM71_02255 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D CLM71_05645 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLM71_16850 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLM71_21640 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLM71_04695 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLM71_20380 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:serm00520] D CLM71_09175 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CLM71_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLM71_05615 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLM71_17075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLM71_05595 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CLM71_09215 N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D CLM71_05585 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CLM71_05590 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CLM71_04695 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLM71_20380 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CLM71_23625 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLM71_02010 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CLM71_23620 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CLM71_17970 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D CLM71_10810 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D CLM71_21045 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLM71_01320 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLM71_00730 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLM71_00735 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CLM71_09860 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D CLM71_09850 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CLM71_09855 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CLM71_09865 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CLM71_17695 glycoside hydrolase 43 family protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D CLM71_09120 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CLM71_12345 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CLM71_05310 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CLM71_16850 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLM71_05645 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLM71_12765 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07255 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07260 GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_12760 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLM71_05925 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CLM71_05930 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CLM71_07365 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLM71_12755 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D CLM71_13610 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLM71_13615 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CLM71_13620 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CLM71_21640 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLM71_12315 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLM71_07375 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D CLM71_07370 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:serm00620] D CLM71_01510 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLM71_11130 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLM71_19555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLM71_19550 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_07815 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CLM71_02390 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CLM71_12740 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CLM71_21635 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLM71_17955 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CLM71_07140 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLM71_21465 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLM71_11835 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLM71_13325 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D CLM71_09740 alcohol dehydrogenase K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D CLM71_16420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CLM71_16425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLM71_02360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D CLM71_13045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_10640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_18450 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLM71_21325 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLM71_21330 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLM71_16535 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLM71_08125 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CLM71_18965 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D CLM71_07690 pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CLM71_11150 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D CLM71_06280 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D CLM71_10735 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CLM71_10950 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CLM71_04235 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CLM71_07945 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CLM71_13215 glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLM71_00100 glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CLM71_07190 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CLM71_17170 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CLM71_01925 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CLM71_07045 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CLM71_19605 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CLM71_12310 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CLM71_01645 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_01640 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_01635 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CLM71_01630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CLM71_22930 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLM71_22310 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_09545 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_10560 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLM71_21710 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D CLM71_03395 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D CLM71_12655 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:serm00630] D CLM71_21705 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D CLM71_01510 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLM71_21710 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D CLM71_01925 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CLM71_05745 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CLM71_12525 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLM71_19540 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLM71_16245 catalase K03781 katE; catalase [EC:1.11.1.6] D CLM71_13215 glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLM71_00100 glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CLM71_22225 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CLM71_23395 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLM71_16115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_17905 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_19090 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CLM71_19100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_19095 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CLM71_12065 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D CLM71_03640 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D CLM71_03645 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLM71_05190 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLM71_13030 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CLM71_21695 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CLM71_05875 oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2] D CLM71_00200 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLM71_00205 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLM71_00210 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CLM71_00215 formate dehydrogenase cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D CLM71_15055 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D CLM71_12785 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLM71_16140 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLM71_09430 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:serm00640] D CLM71_01510 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLM71_16420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CLM71_16425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLM71_02360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_07815 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CLM71_21305 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_18450 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLM71_21325 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLM71_21330 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLM71_16535 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLM71_20760 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CLM71_05780 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLM71_05785 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLM71_22510 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLM71_19540 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLM71_08100 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D CLM71_20455 NADH-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:serm00650] D CLM71_02635 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLM71_14995 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_11270 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D CLM71_02390 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] D CLM71_12740 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CLM71_05760 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_05765 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_05750 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLM71_05755 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLM71_01645 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_01640 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_01635 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CLM71_01630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CLM71_20760 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CLM71_11590 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_20755 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_07815 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CLM71_11130 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLM71_03340 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03410 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_22795 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_16310 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_19200 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_17005 acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03335 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_03415 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_22790 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CLM71_17010 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CLM71_19885 SDR family oxidoreductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D CLM71_09370 3-oxoacyl-ACP reductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:serm00660] D CLM71_03340 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03410 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_22795 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_16310 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_19200 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_17005 acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03335 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_03415 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_22790 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CLM71_17010 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CLM71_05780 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLM71_05785 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLM71_09510 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D CLM71_03385 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CLM71_03380 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CLM71_03390 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:serm00562] D CLM71_17880 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLM71_23720 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLM71_23710 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D CLM71_20370 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D CLM71_12070 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CLM71_22485 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CLM71_22520 inosose isomerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11] D CLM71_22475 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44] D CLM71_22490 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D CLM71_22505 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D CLM71_22495 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D CLM71_22510 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D CLM71_23040 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:serm00190] D CLM71_16380 NADH-quinone oxidoreductase subunit NuoA K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D CLM71_16375 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D CLM71_16370 NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D CLM71_16365 NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CLM71_16360 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CLM71_16355 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D CLM71_16350 NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D CLM71_16345 NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D CLM71_16340 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CLM71_16335 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D CLM71_16330 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D CLM71_16325 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D CLM71_16320 NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CLM71_09185 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CLM71_05760 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_05765 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_05750 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLM71_05755 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLM71_01645 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_01640 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_01635 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CLM71_01630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CLM71_04870 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CLM71_04875 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D CLM71_04880 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D CLM71_04885 cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D CLM71_04890 cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D CLM71_13775 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLM71_05790 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLM71_13780 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLM71_05795 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLM71_05800 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CLM71_23600 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLM71_23610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLM71_23605 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLM71_23595 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CLM71_23615 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLM71_23580 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLM71_23590 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLM71_23585 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLM71_01885 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CLM71_17410 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:serm00710] D CLM71_19175 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLM71_12865 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_12010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_17520 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CLM71_19170 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_12385 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_01900 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CLM71_23015 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CLM71_19865 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_19870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_17215 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_12135 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_12140 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_16435 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_16440 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_19190 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_19145 ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CLM71_17205 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CLM71_22105 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D CLM71_23040 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLM71_22230 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CLM71_03105 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLM71_17210 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CLM71_22930 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLM71_22310 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_09545 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CLM71_17170 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CLM71_01925 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:serm00720] D CLM71_11130 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CLM71_10560 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLM71_22930 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLM71_01925 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CLM71_19605 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CLM71_12310 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CLM71_05760 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_05765 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_05750 succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CLM71_05755 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CLM71_01645 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_01640 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_01635 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CLM71_01630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CLM71_05785 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CLM71_05780 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CLM71_09305 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLM71_12525 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLM71_19540 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CLM71_18450 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLM71_21325 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLM71_21330 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLM71_16535 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLM71_05320 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLM71_22940 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLM71_16425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLM71_02360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D CLM71_16420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CLM71_01510 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:serm00680] D CLM71_11920 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D CLM71_07140 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLM71_07135 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D CLM71_00200 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLM71_00205 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CLM71_00210 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CLM71_00215 formate dehydrogenase cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D CLM71_16115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_17905 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_03675 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLM71_22930 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CLM71_01925 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CLM71_17520 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CLM71_19170 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_12385 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CLM71_01900 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CLM71_23015 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_15885 cytochrome C K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D CLM71_15890 trimethylamine-N-oxide reductase TorA K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D CLM71_16420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CLM71_16425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLM71_01510 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLM71_10560 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CLM71_05910 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_03050 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_00555 alpha-ribazole phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_23105 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLM71_19140 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLM71_07840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLM71_02995 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CLM71_18135 hypothetical protein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:serm00910] D CLM71_20910 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CLM71_13870 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CLM71_13920 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CLM71_13915 ntrB; nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CLM71_13910 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CLM71_13815 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20915 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CLM71_13810 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20920 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CLM71_13800 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20930 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CLM71_17245 periplasmic nitrate reductase subunit alpha K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D CLM71_17230 napB; nitrate reductase K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D CLM71_13900 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D CLM71_13905 nirD; nitrite reductase (NAD(P)H) small subunit K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4] D CLM71_22200 nitrite reductase (NAD(P)H) K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D CLM71_22205 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D CLM71_07700 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D CLM71_06850 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CLM71_05035 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CLM71_22635 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CLM71_23395 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLM71_20990 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLM71_20995 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLM71_19425 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D CLM71_01520 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:serm00920] D CLM71_17110 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D CLM71_23045 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CLM71_17105 molybdate ABC transporter permease subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D CLM71_17100 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D CLM71_17095 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CLM71_22080 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CLM71_22070 taurine transporter subunit K15552 tauC; taurine transport system permease protein D CLM71_22075 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CLM71_22065 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D CLM71_07995 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15135 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15105 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_07985 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D CLM71_15145 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CLM71_07980 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CLM71_15150 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CLM71_07990 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D CLM71_15125 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D CLM71_08000 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CLM71_03760 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLM71_03755 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLM71_03765 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D CLM71_01845 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CLM71_03735 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CLM71_03725 cysJ; sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D CLM71_03730 sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D CLM71_03680 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D CLM71_06540 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLM71_22400 thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D CLM71_23080 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CLM71_17060 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLM71_21715 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D CLM71_22950 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:serm00061] D CLM71_18450 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CLM71_21325 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CLM71_21330 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CLM71_16535 acetyl-CoA carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CLM71_04150 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_04155 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_09085 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_11505 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_18905 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_12155 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_09075 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLM71_11565 transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLM71_09070 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CLM71_04200 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLM71_16675 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLM71_04215 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_09090 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_18915 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_04210 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_09080 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11495 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_18900 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_12050 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_00305 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_08055 bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CLM71_18475 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLM71_11500 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLM71_11550 short-chain dehydrogenase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104] D CLM71_11270 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D CLM71_03405 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_12995 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:serm00071] D CLM71_16730 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_01260 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_04355 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D CLM71_03405 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_12995 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_18750 bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D CLM71_19235 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CLM71_07140 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLM71_12740 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CLM71_21635 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLM71_17955 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:serm00074] D CLM71_11490 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CLM71_17990 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CLM71_15310 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D CLM71_04150 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_04155 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_09085 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_11505 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_18905 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_12155 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_09075 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLM71_11565 transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:serm00561] D CLM71_03645 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLM71_05190 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLM71_21465 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLM71_11835 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D CLM71_17185 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D CLM71_20570 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D CLM71_17180 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D CLM71_20565 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D CLM71_20560 dihydroxyacetone kinase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CLM71_23010 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLM71_19880 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLM71_21580 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CLM71_09065 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CLM71_20645 acyl-phosphate--glycerol-3-phosphate O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CLM71_20500 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLM71_21575 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CLM71_03180 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:serm00564] D CLM71_23085 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CLM71_22415 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CLM71_00930 anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CLM71_00935 anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D CLM71_00940 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D CLM71_21580 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CLM71_20645 acyl-phosphate--glycerol-3-phosphate O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CLM71_20500 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CLM71_21575 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CLM71_20370 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] D CLM71_00895 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D CLM71_00910 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D CLM71_00920 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CLM71_01100 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CLM71_18750 bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D CLM71_22735 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D CLM71_18500 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CLM71_18310 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CLM71_01660 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CLM71_08525 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CLM71_04825 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D CLM71_12515 phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D CLM71_17960 phosphatidylglycerophosphatase C K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D CLM71_00515 HAD-IB family hydrolase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D CLM71_12690 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:serm00565] D CLM71_00895 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D CLM71_20370 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:serm00600] D CLM71_04525 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CLM71_02715 arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1] D CLM71_03180 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D CLM71_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLM71_05615 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism D CLM71_00895 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D CLM71_00895 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:serm00592] D CLM71_00895 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D CLM71_16730 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_01260 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:serm01040] D CLM71_05265 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CLM71_04995 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CLM71_12645 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:serm00230] D CLM71_20550 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CLM71_22285 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D CLM71_02975 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CLM71_05645 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLM71_13300 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLM71_22055 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CLM71_16515 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CLM71_01470 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CLM71_17380 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CLM71_13570 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CLM71_17940 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CLM71_17375 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CLM71_05280 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CLM71_05285 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CLM71_17315 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CLM71_09275 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CLM71_01475 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLM71_05150 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CLM71_05215 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLM71_03810 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLM71_05575 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CLM71_22295 GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D CLM71_05200 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D CLM71_02980 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLM71_04685 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CLM71_04100 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CLM71_19430 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CLM71_17735 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CLM71_17820 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLM71_03045 non-canonical purine NTP phosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D CLM71_19685 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CLM71_04430 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D CLM71_12205 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D CLM71_12200 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D CLM71_17730 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLM71_20790 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLM71_03540 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D CLM71_12210 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D CLM71_23325 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CLM71_16210 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLM71_18205 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLM71_16215 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLM71_18210 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLM71_02250 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CLM71_03600 dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D CLM71_16395 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D CLM71_08585 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D CLM71_23335 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CLM71_17415 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CLM71_00700 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CLM71_03660 GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D CLM71_00825 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D CLM71_05700 3',5'-cyclic-nucleotide phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17] D CLM71_01745 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CLM71_12405 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D CLM71_15700 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CLM71_18585 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D CLM71_05065 adenosine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D CLM71_01840 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLM71_19740 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLM71_22640 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLM71_05175 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLM71_03665 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLM71_20540 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D CLM71_03280 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D CLM71_03765 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D CLM71_03760 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLM71_03755 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLM71_08225 monooxygenase K16839 hpxO; FAD-dependent urate hydroxylase [EC:1.14.13.113] D CLM71_08240 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D CLM71_08235 uraD; OHCU decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D CLM71_08265 Asp/Glu racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] D CLM71_08270 allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5] D CLM71_08325 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D CLM71_08320 aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D CLM71_08280 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5] D CLM71_08290 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] C 00240 Pyrimidine metabolism [PATH:serm00240] D CLM71_03200 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLM71_03195 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLM71_02290 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CLM71_02285 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CLM71_21170 amidohydrolase/deacetylase family metallohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CLM71_09030 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CLM71_08005 dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CLM71_23240 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CLM71_07320 hypothetical protein K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CLM71_12495 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CLM71_18520 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CLM71_17820 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLM71_03665 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLM71_21280 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CLM71_20780 metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D CLM71_03670 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CLM71_07850 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CLM71_12810 NTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65] D CLM71_07230 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CLM71_05215 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLM71_03810 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLM71_05575 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CLM71_04640 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CLM71_01180 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CLM71_04685 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CLM71_17370 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CLM71_01840 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLM71_19740 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLM71_22640 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CLM71_05480 pyrimidine-specific ribonucleoside hydrolase RihA K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D CLM71_18585 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D CLM71_07195 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CLM71_22195 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CLM71_02250 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CLM71_07235 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CLM71_16210 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLM71_18205 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLM71_16215 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLM71_18210 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLM71_16395 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D CLM71_08585 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D CLM71_09105 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CLM71_23230 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CLM71_02970 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D CLM71_12745 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D CLM71_18705 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLM71_12225 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:serm00250] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_18050 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CLM71_07835 L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLM71_12845 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLM71_07110 beta-aspartyl-peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CLM71_23550 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CLM71_05570 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CLM71_04320 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D CLM71_16390 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLM71_01580 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CLM71_22910 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLM71_22905 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLM71_01745 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CLM71_09275 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CLM71_02290 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CLM71_02285 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CLM71_20760 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CLM71_11590 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_20755 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_20990 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLM71_20995 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CLM71_05035 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CLM71_22635 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CLM71_13935 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CLM71_23395 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLM71_03200 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLM71_03195 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLM71_19700 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLM71_23625 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLM71_16515 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:serm00260] D CLM71_21650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLM71_03080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CLM71_22945 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CLM71_22445 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLM71_03085 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CLM71_03090 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CLM71_07685 low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D CLM71_16115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_17905 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_13215 glyoxylate/hydroxypyruvate reductase GhrA K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CLM71_00100 glyoxylate/hydroxypyruvate reductase GhrB K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CLM71_03645 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLM71_05190 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CLM71_05910 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_03050 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_00555 alpha-ribazole phosphatase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_23105 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CLM71_19140 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLM71_07840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLM71_02995 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CLM71_12225 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D CLM71_23125 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CLM71_23120 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D CLM71_19090 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CLM71_19100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_19095 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CLM71_18310 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CLM71_06995 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D CLM71_06990 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D CLM71_16045 Rieske (2Fe-2S) protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D CLM71_16040 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D CLM71_16065 N-methylproline demethylase K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3] D CLM71_16060 (Fe-S)-binding protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit D CLM71_16055 electron transfer flavoprotein subunit alpha K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha D CLM71_16050 electron transfer flavoprotein subunit beta K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta D CLM71_16130 sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D CLM71_16120 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D CLM71_16135 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D CLM71_16125 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D CLM71_07510 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D CLM71_07505 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D CLM71_16090 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLM71_13595 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLM71_07520 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLM71_22775 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLM71_11820 hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLM71_00035 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLM71_11445 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CLM71_16855 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CLM71_12615 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CLM71_12610 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CLM71_11850 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D CLM71_11845 aspartate aminotransferase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] D CLM71_11810 doeA; ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44] D CLM71_11805 doeB; N-alpha-acetyl diaminobutyric acid deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125] D CLM71_11825 hypothetical protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76] D CLM71_11830 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] C 00270 Cysteine and methionine metabolism [PATH:serm00270] D CLM71_23080 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CLM71_17060 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CLM71_07505 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D CLM71_20435 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_13150 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_12350 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_07510 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D CLM71_17165 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D CLM71_21670 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLM71_06720 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CLM71_01155 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CLM71_19290 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CLM71_19460 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CLM71_19455 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CLM71_03595 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CLM71_04350 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D CLM71_04100 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CLM71_17675 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CLM71_10460 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CLM71_04345 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D CLM71_04330 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D CLM71_04335 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D CLM71_04340 acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D CLM71_21505 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CLM71_03690 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D CLM71_09590 Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D CLM71_06165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CLM71_03905 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLM71_21650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLM71_03080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CLM71_22945 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CLM71_22445 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLM71_03085 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CLM71_21715 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D CLM71_22950 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CLM71_22785 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLM71_03900 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CLM71_19625 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_06540 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLM71_16855 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CLM71_13975 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D CLM71_01925 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CLM71_16090 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLM71_13595 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLM71_07520 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CLM71_17090 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D CLM71_19140 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLM71_07840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:serm00280] D CLM71_22785 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_16730 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_01260 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_22510 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:serm00290] D CLM71_22775 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLM71_11820 hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLM71_00035 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CLM71_03385 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CLM71_03380 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CLM71_03390 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CLM71_03340 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03410 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_22795 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_16310 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_19200 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_17005 acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03335 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_03415 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_22790 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CLM71_22755 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CLM71_22780 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CLM71_22785 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLM71_00095 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D CLM71_16390 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLM71_03395 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D CLM71_12655 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:serm00300] D CLM71_21650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLM71_03080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CLM71_22945 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CLM71_22445 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLM71_06220 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLM71_10840 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLM71_17325 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLM71_03190 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CLM71_18545 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CLM71_22135 bifunctional succinylornithine transaminase/acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CLM71_17290 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CLM71_00840 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CLM71_18795 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CLM71_03445 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLM71_03450 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:serm00310] D CLM71_05775 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_16855 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CLM71_18430 lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D CLM71_11590 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_20755 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_07175 L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D CLM71_07880 DUF1338 domain-containing protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D CLM71_10585 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D CLM71_08455 oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] C 00220 Arginine biosynthesis [PATH:serm00220] D CLM71_02295 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CLM71_22910 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLM71_22905 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLM71_06505 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D CLM71_06500 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D CLM71_19700 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLM71_23395 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLM71_03200 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CLM71_03195 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CLM71_05035 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CLM71_22635 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_16390 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLM71_18655 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D CLM71_22915 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CLM71_22920 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CLM71_22135 bifunctional succinylornithine transaminase/acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CLM71_22925 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:serm00330] D CLM71_22195 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D CLM71_19285 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D CLM71_19280 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D CLM71_19730 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CLM71_19455 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CLM71_19460 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CLM71_17385 spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D CLM71_07465 speB; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7] D CLM71_05040 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D CLM71_13760 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D CLM71_05045 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D CLM71_13750 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D CLM71_13765 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D CLM71_13755 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D CLM71_13745 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D CLM71_02615 glutamine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D CLM71_09395 glutamine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11] D CLM71_02685 FAD-dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D CLM71_09375 gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D CLM71_09380 aldehyde dehydrogenase PuuC K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D CLM71_09390 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D CLM71_19670 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CLM71_13935 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CLM71_04445 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CLM71_04450 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CLM71_13525 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:serm00340] D CLM71_07450 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CLM71_07415 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D CLM71_07425 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D CLM71_07430 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CLM71_07420 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CLM71_07435 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D CLM71_11335 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_07440 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_07445 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CLM71_03700 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CLM71_03705 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D CLM71_09435 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D CLM71_09450 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13] D CLM71_09430 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00350 Tyrosine metabolism [PATH:serm00350] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_11335 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_07440 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_21505 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CLM71_04555 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D CLM71_07140 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLM71_12740 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CLM71_21635 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLM71_17955 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CLM71_02800 hpaB; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D CLM71_02805 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D CLM71_02770 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15] D CLM71_02765 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D CLM71_02775 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D CLM71_02755 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D CLM71_02760 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D CLM71_02780 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D CLM71_02785 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D CLM71_11590 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_20755 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_06580 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CLM71_09250 malate/lactate/ureidoglycolate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] C 00360 Phenylalanine metabolism [PATH:serm00360] D CLM71_04555 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D CLM71_15010 paaF; phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D CLM71_15000 paaD; phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D CLM71_14960 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D CLM71_14965 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D CLM71_14970 paaI; phenylacetate-CoA oxygenase subunit PaaI K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D CLM71_14975 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D CLM71_14980 phenylacetic acid degradation protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D CLM71_14990 paaB; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D CLM71_14955 phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D CLM71_15005 pcaF; 3-oxoadipyl-CoA thiolase K02615 paaJ; 3-oxo-5,6-didehydrosuberyl-CoA/3-oxoadipyl-CoA thiolase [EC:2.3.1.223 2.3.1.174] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_02635 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLM71_14995 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_11335 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_07440 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_21505 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CLM71_22470 GNAT family N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D CLM71_06580 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CLM71_12925 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CLM71_09250 malate/lactate/ureidoglycolate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-] D CLM71_09950 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D CLM71_19235 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:serm00380] D CLM71_14465 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D CLM71_15055 esterase K01432 AFMID; arylformamidase [EC:3.5.1.9] D CLM71_05775 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_16870 indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74] D CLM71_16245 catalase K03781 katE; catalase [EC:1.11.1.6] D CLM71_09950 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:serm00400] D CLM71_04065 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLM71_10545 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLM71_05905 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLM71_22245 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CLM71_21320 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CLM71_09525 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CLM71_21760 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CLM71_07830 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D CLM71_11720 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8] D CLM71_04670 shikimate kinase AroL K00891 aroK; shikimate kinase [EC:2.7.1.71] D CLM71_22250 shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D CLM71_07845 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CLM71_16705 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CLM71_12590 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CLM71_12595 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CLM71_12600 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CLM71_12605 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D CLM71_12615 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CLM71_12610 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CLM71_04070 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D CLM71_09420 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CLM71_04075 pheA; bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CLM71_21515 ArtI protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_11335 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_07440 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_21505 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:serm00410] D CLM71_19405 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CLM71_20760 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CLM71_19400 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_22510 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:serm00430] D CLM71_04755 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_11575 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_22065 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D CLM71_16425 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CLM71_02360 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8] D CLM71_16420 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:serm00440] D CLM71_09650 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D CLM71_09645 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D CLM71_02220 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D CLM71_02230 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D CLM71_02225 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D CLM71_02205 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D CLM71_02200 phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D CLM71_02215 carbon-phosphorus lyase complex subunit PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D CLM71_02190 phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:serm00450] D CLM71_22950 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CLM71_20435 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_13150 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_12350 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_21670 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLM71_06720 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CLM71_01155 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CLM71_07505 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D CLM71_03690 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D CLM71_10620 cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CLM71_07770 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CLM71_03760 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLM71_03755 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLM71_12830 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CLM71_00235 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CLM71_21165 SelA-like pyridoxal phosphate-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CLM71_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:serm00460] D CLM71_06320 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CLM71_04755 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_11575 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_07835 L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLM71_12845 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CLM71_07110 beta-aspartyl-peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CLM71_23550 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CLM71_16115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_17905 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:serm00470] D CLM71_21535 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLM71_12920 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLM71_03480 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_06295 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_16855 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CLM71_19700 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLM71_22865 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CLM71_03460 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLM71_11065 L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D CLM71_11445 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CLM71_13975 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D CLM71_00840 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CLM71_18795 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CLM71_08480 hydroxyproline-2-epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8] D CLM71_08495 FAD/NAD(P)-binding oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-] D CLM71_08485 D-amino-acid oxidase K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-] D CLM71_08490 (2Fe-2S)-binding protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma D CLM71_08470 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D CLM71_19780 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLM71_08465 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D CLM71_12925 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:serm00480] D CLM71_04755 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_11575 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_08395 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D CLM71_05720 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CLM71_05710 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D CLM71_05715 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D CLM71_03900 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CLM71_19625 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CLM71_02330 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CLM71_17830 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D CLM71_07975 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CLM71_04425 cytosol nonspecific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CLM71_21405 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_10835 glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_05030 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_17585 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_18975 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_07495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_20745 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_22680 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D CLM71_09305 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CLM71_07410 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CLM71_13035 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CLM71_09840 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D CLM71_09935 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D CLM71_22900 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D CLM71_19730 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CLM71_19455 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:serm00511] D CLM71_04525 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CLM71_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLM71_05615 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:serm00540] D CLM71_18470 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CLM71_03500 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CLM71_18480 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CLM71_05290 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CLM71_18465 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CLM71_07875 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CLM71_21090 arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CLM71_13255 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CLM71_21095 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CLM71_07905 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CLM71_23190 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CLM71_08975 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLM71_14925 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLM71_13055 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D CLM71_08375 lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D CLM71_14015 lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D CLM71_15930 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D CLM71_10750 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CLM71_00580 kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CLM71_04580 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CLM71_09870 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CLM71_21365 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D CLM71_04360 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CLM71_20610 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CLM71_18350 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CLM71_23130 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CLM71_23140 lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D CLM71_23135 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CLM71_23170 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D CLM71_00530 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D CLM71_13580 glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D CLM71_23175 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D CLM71_23150 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D CLM71_00535 O-antigen biosynthesis protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:serm00542] D CLM71_13855 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_00720 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:serm00541] D CLM71_12765 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07255 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07260 GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CLM71_07365 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CLM71_12760 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CLM71_12755 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D CLM71_07290 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLM71_07285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLM71_07295 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLM71_07300 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D CLM71_00745 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D CLM71_00740 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D CLM71_12315 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CLM71_07375 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D CLM71_07370 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CLM71_23620 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CLM71_00730 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLM71_00735 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:serm00550] D CLM71_21045 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLM71_01320 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLM71_03475 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CLM71_03460 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLM71_03445 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLM71_03480 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_06295 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_03450 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CLM71_18505 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLM71_20635 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLM71_07540 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLM71_03455 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLM71_03470 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CLM71_20965 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CLM71_22280 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLM71_19345 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CLM71_11380 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLM71_05415 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLM71_03440 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLM71_11385 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLM71_05400 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_07515 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_10955 serine-type D-Ala-D-Ala carboxypeptidase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_01980 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:serm00552] D CLM71_20635 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLM71_07540 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLM71_13855 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_00720 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D CLM71_13855 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_00720 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:serm00543] D CLM71_07280 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D CLM71_13855 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_00720 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_00765 lipopolysaccharide N-acetylmannosaminouronosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D CLM71_00755 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D CLM71_23080 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CLM71_02560 hypothetical protein K16568 exoZ; exopolysaccharide production protein ExoZ B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:serm00730] D CLM71_01430 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CLM71_17535 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CLM71_01420 molybdopterin-synthase adenylyltransferase MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D CLM71_20245 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_17865 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_04845 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CLM71_01405 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D CLM71_04830 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLM71_01410 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CLM71_17540 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CLM71_01425 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CLM71_04820 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CLM71_01665 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CLM71_09170 thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89] D CLM71_05175 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:serm00740] D CLM71_12520 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CLM71_04805 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CLM71_00855 flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D CLM71_20595 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D CLM71_04810 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CLM71_10680 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CLM71_03150 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CLM71_23710 histidine-type phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2] D CLM71_09325 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D CLM71_02805 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36] D CLM71_00270 hypothetical protein K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D CLM71_01255 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D CLM71_06370 flavin reductase K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36] D CLM71_08000 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CLM71_20450 NADPH-dependent oxidoreductase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] D CLM71_17540 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CLM71_20550 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CLM71_09290 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D CLM71_16510 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:serm00750] D CLM71_10820 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D CLM71_11300 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CLM71_10830 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CLM71_19180 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D CLM71_16560 4-phosphoerythronate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D CLM71_07840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLM71_03295 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CLM71_17995 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D CLM71_03090 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:serm00760] D CLM71_18050 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CLM71_19210 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D CLM71_05880 quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CLM71_03560 nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CLM71_07965 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CLM71_02980 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CLM71_03005 trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D CLM71_05215 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CLM71_03810 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CLM71_05575 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CLM71_05430 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CLM71_03665 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLM71_01440 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CLM71_17920 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D CLM71_03845 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CLM71_12850 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CLM71_22050 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D CLM71_09220 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CLM71_18090 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CLM71_22890 Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D CLM71_11255 pntA; NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D CLM71_11260 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D CLM71_08340 (2Fe-2S)-binding protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1] D CLM71_08335 aldehyde dehydrogenase K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1] D CLM71_11590 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CLM71_20755 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:serm00770] D CLM71_03340 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03410 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_22795 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_16310 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_19200 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_17005 acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CLM71_03335 acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_03415 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CLM71_22790 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CLM71_22755 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CLM71_22780 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CLM71_19395 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CLM71_06765 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CLM71_04855 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CLM71_19400 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CLM71_01330 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CLM71_23225 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CLM71_03665 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CLM71_23200 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CLM71_03535 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CLM71_11490 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CLM71_17990 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CLM71_22555 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D CLM71_04765 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D CLM71_22785 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLM71_19405 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:serm00780] D CLM71_06015 bioC; malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D CLM71_04200 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLM71_16675 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLM71_04215 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_09090 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_18915 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_04210 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_09080 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11495 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_18900 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_12050 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_00305 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_18475 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLM71_11500 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLM71_22370 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D CLM71_06010 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CLM71_06000 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CLM71_06020 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CLM71_12280 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CLM71_06005 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CLM71_01325 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CLM71_18755 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:serm00785] D CLM71_05390 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CLM71_05385 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CLM71_09890 lplA; lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_19555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CLM71_19550 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CLM71_05770 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CLM71_05775 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CLM71_19090 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CLM71_19100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLM71_19095 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:serm00790] D CLM71_07155 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CLM71_10995 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D CLM71_13100 dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D CLM71_20640 folB; bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CLM71_19380 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CLM71_02005 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CLM71_03270 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CLM71_16530 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CLM71_12520 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CLM71_22140 anthranilate/aminodeoxychorismate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D CLM71_13585 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D CLM71_09095 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CLM71_16480 dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D CLM71_11235 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D CLM71_03720 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CLM71_03715 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CLM71_04950 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CLM71_18580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CLM71_06050 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CLM71_06060 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CLM71_06070 molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CLM71_03110 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D CLM71_06055 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CLM71_07100 molybdopterin molybdotransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CLM71_19590 molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D CLM71_23465 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:serm00670] D CLM71_03270 type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CLM71_11235 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D CLM71_05320 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CLM71_16115 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_17905 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CLM71_17380 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CLM71_01475 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLM71_21790 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CLM71_19100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CLM71_21670 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CLM71_18705 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CLM71_12785 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLM71_16140 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CLM71_22940 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CLM71_19135 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:serm00860] D CLM71_16905 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLM71_13280 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CLM71_03570 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CLM71_08875 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLM71_01235 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLM71_00815 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CLM71_00810 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CLM71_01445 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CLM71_17145 oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D CLM71_23410 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CLM71_01285 menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D CLM71_05195 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CLM71_00805 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CLM71_03750 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D CLM71_22215 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D CLM71_04870 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CLM71_12565 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CLM71_21965 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:serm00130] D CLM71_21590 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D CLM71_21585 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CLM71_01250 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D CLM71_16510 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CLM71_19105 FAD-dependent 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D CLM71_16205 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D CLM71_19110 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D CLM71_01200 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CLM71_05530 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D CLM71_16275 isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D CLM71_16945 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CLM71_16270 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CLM71_16265 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D CLM71_16255 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CLM71_16250 o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CLM71_16260 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CLM71_10590 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D CLM71_22990 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CLM71_20335 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:serm00900] D CLM71_04830 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CLM71_18510 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CLM71_03795 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CLM71_13295 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CLM71_03800 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CLM71_17800 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CLM71_03170 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CLM71_16510 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CLM71_07555 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CLM71_04835 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CLM71_01945 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CLM71_18505 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:serm00903] D CLM71_10275 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:serm00907] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_16730 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_01260 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CLM71_19865 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_19870 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_17215 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_12135 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_12140 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_16435 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_16440 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CLM71_19190 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D CLM71_13480 FAD-dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-] C 00253 Tetracycline biosynthesis D CLM71_13480 FAD-dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-] C 00523 Polyketide sugar unit biosynthesis [PATH:serm00523] D CLM71_07290 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLM71_07285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLM71_07295 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLM71_07300 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:serm01053] D CLM71_16275 isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D CLM71_16945 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CLM71_16935 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D CLM71_16930 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D CLM71_15310 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D CLM71_16940 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D CLM71_16985 entF; non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D CLM71_15370 salicylate synthase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21] D CLM71_15415 (2,3-dihydroxybenzoyl)adenylate synthase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D CLM71_15395 non-ribosomal peptide synthetase K04784 irp2; yersiniabactin nonribosomal peptide synthetase D CLM71_15405 thiazolinyl imide reductase K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D CLM71_15400 polyketide synthase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase C 01055 Biosynthesis of vancomycin group antibiotics [PATH:serm01055] D CLM71_12105 transcriptional regulator K16423 hpgT; (S)-3,5-dihydroxyphenylglycine transaminase [EC:2.6.1.103] D CLM71_12100 type III polyketide synthase K16424 dpgA; 3,5-dihydroxyphenylacetyl-CoA synthase [EC:2.3.1.246] D CLM71_12095 enoyl-CoA hydratase K16425 dpgB; isomerase DpgB D CLM71_12085 enoyl-CoA hydratase K16426 dpgD; dehydration protein DpgD D CLM71_12090 enoyl-CoA hydratase K16427 dpgC; (3,5-dihydroxyphenyl)acetyl-CoA 1,2-dioxygenase [EC:1.13.11.80] D CLM71_07285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:serm00946] D CLM71_06320 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:serm00332] D CLM71_04445 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CLM71_04450 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:serm00261] D CLM71_12105 transcriptional regulator K16423 hpgT; (S)-3,5-dihydroxyphenylglycine transaminase [EC:2.6.1.103] D CLM71_10245 MbtH family protein K05375 mbtH; MbtH protein D CLM71_16990 MbtH family protein K05375 mbtH; MbtH protein D CLM71_03760 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CLM71_03755 sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CLM71_21650 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CLM71_03080 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CLM71_22945 metL; bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CLM71_22445 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CLM71_06220 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLM71_10840 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLM71_17325 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CLM71_03190 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CLM71_01335 GNAT family N-acetyltransferase K19113 ttr; acetyltransferase [EC:2.3.1.-] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:serm00521] D CLM71_16850 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CLM71_05645 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CLM71_17880 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLM71_23720 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CLM71_12070 dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CLM71_22485 inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D CLM71_07290 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLM71_07285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CLM71_07295 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D CLM71_07300 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CLM71_16850 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:serm00525] D CLM71_07290 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CLM71_07285 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:serm00401] D CLM71_04070 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_11335 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_07440 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_21505 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis [PATH:serm00404] D CLM71_13470 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D CLM71_13475 monodechloroaminopyrrolnitrin synthase PrnB K19981 prnB; monodechloroaminopyrrolnitrin synthase D CLM71_13480 FAD-dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-] D CLM71_13485 2Fe-2S ferredoxin K19982 prnD; aminopyrrolnitrin oxygenase [EC:1.14.13.-] C 00405 Phenazine biosynthesis [PATH:serm00405] D CLM71_11950 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D CLM71_12590 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CLM71_12595 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis [PATH:serm00333] D CLM71_22595 biosynthesis protein PigD K21428 pigD; 3-acetyloctanal synthase [EC:2.2.1.12] D CLM71_22590 aspartate aminotransferase family protein K21778 pigE; 3-acetyloctanal aminotransferase [EC:2.6.1.-] D CLM71_22605 hypothetical protein K21779 pigB; 2-methyl-3-n-amyl-dihydropyrrolel dehydrogenase D CLM71_22570 D-alanine--poly(phosphoribitol) ligase K21780 pigI; L-proline---[L-prolyl-carrier protein] ligase [EC:6.2.1.53] D CLM71_22580 acyl carrier protein K21781 pigG; peptidyl carrier protein D CLM71_22610 acyl-CoA dehydrogenase K21782 pigA; L-prolyl-PCP dehydrogenase [EC:1.3.8.14] D CLM71_22565 3-ketoacyl-ACP synthase K21783 pigJ; beta-ketoacyl ACP synthase [EC:2.3.1.-] D CLM71_22575 7-keto-8-aminopelargonate synthetase K21784 pigH; 4-hydroxy-2,2'-bipyrrole-5-methanol synthase D CLM71_22550 prodigiosin biosynthesis protein PigM K21785 pigM; 4-hydroxy-2,2'-bipyrrole-5-methanol dehydrogenase D CLM71_22585 SAM-dependent methyltransferase K21786 pigF; 4-hydroxy-2,2'-bipyrrole-5-carbaldehyde O-methyltransferase [EC:2.1.1.-] D CLM71_22600 phosphoenolpyruvate synthase K21787 pigC; prodigiosin/undecylprodigiosin synthetase D CLM71_09075 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLM71_11565 transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLM71_04210 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_09080 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11495 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_18900 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_12050 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_00305 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CLM71_04150 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_04155 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_09085 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_11505 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_18905 acyl carrier protein K02078 acpP; acyl carrier protein D CLM71_12155 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:serm00999] D CLM71_19290 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CLM71_21760 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CLM71_06320 beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites [PATH:serm00997] D CLM71_04285 lysine 6-monooxygenase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] D CLM71_04295 acetyltransferase K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102] D CLM71_04300 aerobactin synthase IucA K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38] D CLM71_04290 aerobactin synthase IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:serm00362] D CLM71_14580 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CLM71_14585 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CLM71_14590 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CLM71_14595 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CLM71_14575 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CLM71_14565 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D CLM71_14570 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D CLM71_14560 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CLM71_14545 3-oxoadipate CoA-transferase K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D CLM71_14550 3-oxoadipate CoA-transferase K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D CLM71_16730 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_01260 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_14555 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D CLM71_06760 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D CLM71_06735 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CLM71_09505 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D CLM71_09515 PIG-L domain-containing protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83] D CLM71_09510 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D CLM71_19235 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D CLM71_17840 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_02635 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D CLM71_14995 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] C 00627 Aminobenzoate degradation [PATH:serm00627] D CLM71_08125 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CLM71_16510 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CLM71_09535 protocatechuate 3,4-dioxygenase K04099 desB; gallate dioxygenase [EC:1.13.11.57] D CLM71_16825 3,4-dihydroxybenzoate decarboxylase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:serm00364] D CLM71_14580 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CLM71_14585 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CLM71_14590 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CLM71_14595 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CLM71_14575 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CLM71_01175 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CLM71_14565 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:serm00625] D CLM71_21635 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLM71_17955 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CLM71_07140 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLM71_12740 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CLM71_11920 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:serm00361] D CLM71_14575 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CLM71_01175 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CLM71_14565 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00623 Toluene degradation [PATH:serm00623] D CLM71_06580 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CLM71_00285 FAD linked oxidase K05797 pchF; 4-cresol dehydrogenase (hydroxylating) flavoprotein subunit [EC:1.17.9.1] D CLM71_14575 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CLM71_14565 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D CLM71_01175 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:serm00622] D CLM71_06580 alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90] D CLM71_14580 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CLM71_14585 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CLM71_14590 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CLM71_14595 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CLM71_06760 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:serm00633] D CLM71_10740 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D CLM71_16730 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CLM71_01260 acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation D CLM71_04555 NAD-dependent phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] C 00791 Atrazine degradation [PATH:serm00791] D CLM71_06500 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D CLM71_06505 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation [PATH:serm00930] D CLM71_10275 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D CLM71_14985 2,3-dehydroadipyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D CLM71_01265 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CLM71_16725 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D CLM71_06760 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:serm00626] D CLM71_21635 alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CLM71_17955 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CLM71_07140 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CLM71_12740 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:serm03020] D CLM71_01395 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLM71_01400 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLM71_21830 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLM71_23330 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:serm03010] D CLM71_07855 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CLM71_18530 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CLM71_21925 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CLM71_21835 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CLM71_21870 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CLM71_01805 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CLM71_21985 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CLM71_21885 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CLM71_21010 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CLM71_21960 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CLM71_21840 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CLM71_21990 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CLM71_21845 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CLM71_21890 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CLM71_02055 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CLM71_03925 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CLM71_21910 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CLM71_01815 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CLM71_21935 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CLM71_03145 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CLM71_20655 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CLM71_01380 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CLM71_21940 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CLM71_21955 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CLM71_21950 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CLM71_21895 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CLM71_21880 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CLM71_01390 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CLM71_01820 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CLM71_01385 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CLM71_01375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CLM71_21015 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CLM71_21905 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CLM71_21860 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CLM71_21920 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CLM71_21825 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CLM71_21875 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CLM71_03940 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CLM71_09785 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CLM71_01950 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CLM71_21930 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CLM71_21945 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CLM71_21900 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CLM71_15975 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CLM71_01955 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CLM71_23215 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CLM71_21915 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CLM71_21865 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CLM71_05110 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLM71_22960 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLM71_09060 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CLM71_23210 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CLM71_23750 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CLM71_09780 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CLM71_21850 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CLM71_05105 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CLM71_01295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_21750 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_23490 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_18345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_04125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_22840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_18330 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_23480 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_21740 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:serm00970] D CLM71_16900 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_16895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_01305 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_18335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_22845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_03875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_05325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_00775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_16800 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_03880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_03885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_15065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_15090 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_15360 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_15720 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_04135 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLM71_04255 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLM71_22830 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLM71_08535 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLM71_05535 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLM71_05545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLM71_05550 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLM71_01485 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_04120 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_21745 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_23485 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_19005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01675 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01350 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_08530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_00780 tRNA-His K14226 tRNA-His; tRNA His D CLM71_01300 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLM71_18340 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLM71_22850 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLM71_05555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_08540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02435 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_00785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_05845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_05855 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_05865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_16925 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_05560 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_02025 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_05540 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_18635 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_18640 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_18645 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_20680 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_01555 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLM71_19750 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLM71_15995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLM71_00585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLM71_00790 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLM71_03870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_13225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_08145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_16145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_13240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_01355 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_21730 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_04455 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_01340 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_16020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_22825 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CLM71_01345 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLM71_12790 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLM71_12795 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLM71_10660 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_05850 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_16910 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_16915 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_16920 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_10665 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_10670 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_00420 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CLM71_16905 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLM71_19075 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLM71_05600 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CLM71_03860 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLM71_15295 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLM71_13105 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLM71_07960 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CLM71_00145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CLM71_00150 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CLM71_09770 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLM71_07795 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLM71_00235 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CLM71_21165 SelA-like pyridoxal phosphate-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CLM71_05300 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLM71_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLM71_21790 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CLM71_02320 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLM71_05445 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLM71_03155 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLM71_19010 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLM71_13160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLM71_18380 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLM71_17795 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLM71_09795 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLM71_09800 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLM71_10825 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLM71_06800 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLM71_22220 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:serm03060] D CLM71_21855 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLM71_01365 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLM71_02015 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CLM71_04785 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CLM71_04790 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CLM71_04780 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLM71_23735 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLM71_03515 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLM71_23090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CLM71_03510 secA regulator SecM K13301 secM; secretion monitor D CLM71_03920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLM71_05020 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CLM71_01015 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLM71_01215 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CLM71_01220 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CLM71_01225 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CLM71_05380 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE D CLM71_18015 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLM71_03160 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:serm04122] D CLM71_20245 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_17865 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_06540 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CLM71_00960 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CLM71_21995 sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CLM71_22000 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CLM71_22005 sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CLM71_08130 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CLM71_09285 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CLM71_06070 molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CLM71_06050 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CLM71_06065 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D CLM71_07095 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CLM71_06060 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CLM71_03110 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D CLM71_06055 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CLM71_04845 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CLM71_01415 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D CLM71_01420 molybdopterin-synthase adenylyltransferase MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:serm03018] D CLM71_18720 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CLM71_09040 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CLM71_00705 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CLM71_03675 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLM71_02060 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CLM71_06115 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLM71_01755 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLM71_02070 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLM71_00900 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLM71_00715 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_03125 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CLM71_01595 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLM71_01720 RNA chaperone Hfq K03666 hfq; host factor-I protein D CLM71_17410 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CLM71_19375 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:serm03030] D CLM71_13520 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CLM71_04250 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_16105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_18455 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLM71_05155 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLM71_09110 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLM71_05435 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLM71_02910 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CLM71_02325 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLM71_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLM71_10015 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLM71_21540 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLM71_20660 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CLM71_21455 single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein D CLM71_04245 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CLM71_18460 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CLM71_23440 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLM71_23320 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_17045 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:serm03410] D CLM71_10895 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CLM71_18080 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CLM71_19715 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CLM71_23205 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CLM71_17435 DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CLM71_00130 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CLM71_20670 G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CLM71_12805 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLM71_15860 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CLM71_23440 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLM71_19020 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLM71_23320 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_17045 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:serm03420] D CLM71_09195 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CLM71_21460 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CLM71_06035 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CLM71_08520 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CLM71_00860 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLM71_23440 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLM71_23320 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_17045 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:serm03430] D CLM71_03830 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CLM71_01710 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D CLM71_18725 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D CLM71_00860 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLM71_15775 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CLM71_17740 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CLM71_04840 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CLM71_13530 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D CLM71_19020 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLM71_21455 single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein D CLM71_18455 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLM71_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLM71_05155 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLM71_05435 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLM71_09110 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLM71_04250 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_16105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_13520 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CLM71_02325 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLM71_02910 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CLM71_23320 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_17045 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_10080 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_14700 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_22235 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:serm03440] D CLM71_19020 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLM71_21455 single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein D CLM71_00015 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D CLM71_18000 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CLM71_05165 recombination protein RecR K06187 recR; recombination protein RecR D CLM71_03850 recA; recombinase RecA K03553 recA; recombination protein RecA D CLM71_23440 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLM71_13085 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CLM71_13080 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CLM71_13090 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CLM71_23345 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CLM71_18665 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CLM71_18675 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CLM71_18660 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CLM71_18455 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLM71_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLM71_05155 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLM71_05435 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLM71_09110 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLM71_04250 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_16105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_13520 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CLM71_02325 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLM71_02910 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CLM71_22965 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CLM71_01810 primosomal replication protein N K02686 priB; primosomal replication protein N D CLM71_05140 prephenate dehydrogenase K04067 priC; primosomal replication protein N'' C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:serm03250] D CLM71_22160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:serm02010] D CLM71_17110 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D CLM71_23045 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CLM71_17105 molybdate ABC transporter permease subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D CLM71_17100 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D CLM71_17095 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CLM71_13920 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CLM71_13915 ntrB; nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CLM71_13910 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CLM71_22080 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CLM71_22070 taurine transporter subunit K15552 tauC; taurine transport system permease protein D CLM71_22075 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CLM71_07995 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15135 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15105 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_07985 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D CLM71_15145 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CLM71_07980 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CLM71_15150 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CLM71_19810 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLM71_05955 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLM71_05960 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D CLM71_05965 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CLM71_05940 molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D CLM71_03355 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D CLM71_03350 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D CLM71_03345 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CLM71_09225 spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLM71_09230 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D CLM71_09235 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D CLM71_09240 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLM71_18245 proline/glycine betaine ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLM71_18240 proline/glycine betaine ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D CLM71_18235 proline/glycine betaine ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CLM71_06595 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CLM71_12255 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CLM71_06600 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_06610 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_12250 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_12260 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_06605 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLM71_12265 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLM71_21610 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D CLM71_21615 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D CLM71_21620 maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D CLM71_21605 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLM71_11665 ABC transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLM71_11645 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D CLM71_11650 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D CLM71_11655 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D CLM71_21060 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CLM71_21065 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CLM71_21070 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CLM71_21055 anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D CLM71_21075 phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CLM71_23515 ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D CLM71_23520 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D CLM71_23525 ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CLM71_23530 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D CLM71_12445 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D CLM71_12435 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D CLM71_12440 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D CLM71_00320 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D CLM71_00330 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D CLM71_00325 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D CLM71_19850 ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D CLM71_19835 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D CLM71_19840 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D CLM71_01080 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CLM71_01085 sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CLM71_01090 sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CLM71_01095 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CLM71_04720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLM71_23640 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CLM71_17405 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D CLM71_23645 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CLM71_17400 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CLM71_23650 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CLM71_17395 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLM71_23655 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLM71_06470 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLM71_06475 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLM71_06480 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLM71_06465 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CLM71_06305 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D CLM71_16495 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D CLM71_16500 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D CLM71_16490 histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_16505 lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT K10014 hisJ; histidine transport system substrate-binding protein D CLM71_06870 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein D CLM71_06865 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D CLM71_06860 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_07630 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CLM71_07645 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D CLM71_07635 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D CLM71_07640 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D CLM71_07650 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_05500 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D CLM71_05490 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D CLM71_05495 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D CLM71_05485 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CLM71_13970 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CLM71_13965 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D CLM71_13960 L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_01050 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLM71_01055 high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D CLM71_01060 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D CLM71_01065 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLM71_01070 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLM71_06190 lipoprotein NlpA K02073 metQ; D-methionine transport system substrate-binding protein D CLM71_12030 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CLM71_18365 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CLM71_18360 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D CLM71_18355 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CLM71_06515 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CLM71_06520 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D CLM71_06525 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D CLM71_06530 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D CLM71_06535 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D CLM71_06025 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D CLM71_11080 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12720 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12725 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12715 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CLM71_12710 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CLM71_12705 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CLM71_12700 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLM71_00600 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CLM71_02590 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CLM71_00605 dipeptide ABC transporter permease DppB K12369 dppB; dipeptide transport system permease protein D CLM71_00610 dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein D CLM71_00615 dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D CLM71_00620 dppF; dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D CLM71_10990 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CLM71_10985 peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CLM71_10980 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CLM71_10975 peptide ABC transporter ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein D CLM71_10970 peptide ABC transporter ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D CLM71_07120 glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein D CLM71_07125 glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D CLM71_07130 glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein D CLM71_07115 glutathione ABC transporter ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein D CLM71_15950 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D CLM71_10260 Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CLM71_16950 Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CLM71_16960 Fe(3+)-siderophore ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CLM71_16965 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CLM71_16970 fecE; Fe(3+)-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CLM71_19330 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CLM71_19325 Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CLM71_19335 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CLM71_03590 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D CLM71_09835 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D CLM71_09845 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D CLM71_13065 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CLM71_13075 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D CLM71_13070 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLM71_09715 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D CLM71_09705 hypothetical protein K11605 sitC; manganese/iron transport system permease protein D CLM71_09700 iron ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D CLM71_09710 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein D CLM71_07380 ABC transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D CLM71_07385 sugar ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CLM71_09200 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CLM71_09210 lipoprotein-releasing system transmembrane subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D CLM71_09205 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CLM71_16775 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D CLM71_16780 heme ABC transporter permease K02195 ccmC; heme exporter protein C D CLM71_16785 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D CLM71_16790 heme ABC transporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D CLM71_02335 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CLM71_02340 lipopolysaccharide ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CLM71_21110 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CLM71_01025 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CLM71_01020 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLM71_15385 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CLM71_15380 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CLM71_07870 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CLM71_04975 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLM71_04980 multidrug ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLM71_07350 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D CLM71_07760 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CLM71_07765 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CLM71_18925 macrolide ABC transporter permease/ATP-binding protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CLM71_07730 macrolide ABC transporter ATP-binding protein/permease MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CLM71_18835 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D CLM71_18830 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:serm02060] D CLM71_17070 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CLM71_17065 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CLM71_05310 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CLM71_17075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLM71_09120 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CLM71_05595 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CLM71_12345 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CLM71_20390 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLM71_17965 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLM71_15265 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CLM71_02505 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CLM71_02260 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CLM71_00165 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CLM71_18785 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_22175 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_15275 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_18770 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_22165 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_15290 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_18780 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_22170 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_15285 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_13610 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLM71_13615 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CLM71_13620 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CLM71_13365 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CLM71_13380 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CLM71_13375 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CLM71_13370 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D CLM71_16455 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLM71_12395 PTS fructose transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLM71_16450 PTS mannitol transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLM71_12375 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLM71_16445 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CLM71_12380 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CLM71_15875 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D CLM71_15865 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLM71_15870 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CLM71_18715 phosphoenolpyruvate--protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D CLM71_21135 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D CLM71_21125 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:serm03070] D CLM71_20355 anibiotic ABC transporter K12340 tolC; outer membrane protein D CLM71_20555 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CLM71_20140 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C D CLM71_20210 SepL/TyeA/HrpJ family type III secretion system gatekeeper K04058 yscW; type III secretion protein W D CLM71_20120 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D CLM71_20175 EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D CLM71_20170 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D CLM71_20165 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D CLM71_20160 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D CLM71_20205 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D CLM71_20195 EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CLM71_20180 aldolase K03225 yscQ; type III secretion protein Q D CLM71_20130 HrpE/YscL family type III secretion apparatus protein K03223 yscL; type III secretion protein L D CLM71_08355 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CLM71_04785 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CLM71_04790 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CLM71_01365 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLM71_02015 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CLM71_21855 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLM71_04780 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLM71_23735 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLM71_03515 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLM71_03510 secA regulator SecM K13301 secM; secretion monitor D CLM71_01015 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLM71_23090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CLM71_03920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLM71_01215 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CLM71_01220 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CLM71_01225 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CLM71_05380 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE D CLM71_15460 type VI secretion protein K03194 virB1; type IV secretion system protein VirB1 D CLM71_15465 TriB protein K03197 virB2; type IV secretion system protein VirB2 D CLM71_15475 type IV secretion system protein VirB5 K03200 virB5; type IV secretion system protein VirB5 D CLM71_15495 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D CLM71_15485 conjugal transfer protein TrbL K03201 virB6; type IV secretion system protein VirB6 D CLM71_15490 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D CLM71_15500 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10 D CLM71_15470 ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D CLM71_15505 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D CLM71_14405 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_20740 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_23300 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_00245 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_08175 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_14325 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_13665 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_09745 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_08205 type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D CLM71_14275 type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D CLM71_14290 icmF; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D CLM71_08165 hypothetical protein K11892 impK; type VI secretion system protein ImpK D CLM71_14285 type VI secretion system protein TssL K11892 impK; type VI secretion system protein ImpK D CLM71_14395 clpV; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D CLM71_08360 type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:serm02020] D CLM71_04715 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLM71_04710 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CLM71_04720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLM71_23640 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CLM71_09265 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CLM71_09270 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CLM71_20375 Ail/Lom family protein K07804 pagC; putatice virulence related protein PagC D CLM71_04965 EamA family transporter K07790 pagO; putative membrane protein PagO D CLM71_09325 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D CLM71_22325 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CLM71_22330 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CLM71_16170 porin OmpC K09475 ompC; outer membrane pore protein C D CLM71_07955 porin OmpC K09476 ompF; outer membrane pore protein F D CLM71_01145 porin K09476 ompF; outer membrane pore protein F D CLM71_23070 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CLM71_23065 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CLM71_20840 modulator protein K25864 mzrA; modulator protein MzrA D CLM71_11225 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CLM71_11230 two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D CLM71_03605 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CLM71_17470 two-component system sensor histidine kinase BaeA K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CLM71_17475 two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR D CLM71_17455 multidrug transporter subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D CLM71_17460 multidrug transporter subunit MdtB K07788 mdtB; multidrug efflux pump D CLM71_17465 multidrug transporter subunit MdtC K07789 mdtC; multidrug efflux pump D CLM71_17275 aminoglycoside/multidrug transporter subunit AcrD K18324 acrD; multidrug efflux pump D CLM71_01970 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CLM71_01975 two-component system response regulator BasR K07771 basR; two-component system, OmpR family, response regulator BasR D CLM71_09850 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CLM71_18980 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CLM71_18985 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CLM71_16665 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D CLM71_16655 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D CLM71_16650 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D CLM71_19385 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLM71_19390 two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D CLM71_14250 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CLM71_14245 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLM71_13990 flagellin FliC K02406 fliC; flagellin D CLM71_13985 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CLM71_14240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CLM71_05665 two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CLM71_05660 two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CLM71_05680 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D CLM71_05675 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D CLM71_05670 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit D CLM71_05685 K(+)-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit D CLM71_15885 cytochrome C K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D CLM71_20980 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CLM71_03065 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D CLM71_16575 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D CLM71_16580 transcriptional regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD D CLM71_16595 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D CLM71_16590 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CLM71_16585 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein D CLM71_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLM71_17000 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D CLM71_18220 histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D CLM71_15355 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB D CLM71_18225 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB D CLM71_15350 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D CLM71_15345 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D CLM71_15340 citE; citrate (pro-3S)-lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CLM71_15335 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D CLM71_15330 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61] D CLM71_15325 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D CLM71_13410 two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D CLM71_13415 two-component system response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D CLM71_04060 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CLM71_07190 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CLM71_09550 malate permease K11616 maeN; malate:Na+ symporter D CLM71_13875 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D CLM71_13880 two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D CLM71_17260 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D CLM71_17265 two-component system response regulator NarL K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D CLM71_13815 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20915 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CLM71_13810 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20920 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CLM71_13800 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20930 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CLM71_13805 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D CLM71_20925 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D CLM71_01645 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CLM71_01640 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CLM71_01635 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CLM71_01630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CLM71_23715 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CLM71_18370 Rcs stress response system protein RcsF K06080 rcsF; RcsF protein D CLM71_16195 two-component system sensor histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D CLM71_16185 phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D CLM71_14650 transcriptional regulator RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D CLM71_16190 transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D CLM71_18865 LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D CLM71_03650 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CLM71_08515 two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CLM71_03865 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLM71_05895 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CLM71_19650 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CLM71_19655 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D CLM71_05900 DNA-binding response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D CLM71_13450 class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D CLM71_19995 molecular chaperone K07346 fimC; fimbrial chaperone protein D CLM71_06960 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19990 fimbrial protein FimD K07347 fimD; outer membrane usher protein D CLM71_07025 fimbrial protein K07347 fimD; outer membrane usher protein D CLM71_10350 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_18880 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19640 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_18540 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CLM71_17915 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D CLM71_23400 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CLM71_23405 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CLM71_23395 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLM71_00680 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D CLM71_21115 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CLM71_17935 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLM71_17925 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CLM71_14210 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLM71_14220 methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CLM71_01895 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CLM71_00190 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CLM71_14215 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D CLM71_14225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLM71_14230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLM71_14200 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLM71_14205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLM71_05485 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CLM71_05490 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D CLM71_05495 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D CLM71_05500 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D CLM71_22120 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLM71_19700 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CLM71_13775 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLM71_05790 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CLM71_13780 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLM71_05795 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CLM71_05800 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CLM71_20355 anibiotic ABC transporter K12340 tolC; outer membrane protein D CLM71_20555 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CLM71_07265 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLM71_07270 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CLM71_07275 tyrosine-protein kinase Wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLM71_13850 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLM71_00730 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CLM71_00735 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CLM71_14160 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D CLM71_19730 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:serm02024] D CLM71_03905 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CLM71_01720 RNA chaperone Hfq K03666 hfq; host factor-I protein D CLM71_12590 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CLM71_12595 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CLM71_13425 alpha/beta hydrolase K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D CLM71_04065 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLM71_10545 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLM71_05905 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CLM71_11950 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D CLM71_19385 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLM71_19390 two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D CLM71_17935 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLM71_17925 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CLM71_14250 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CLM71_14245 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLM71_05660 two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CLM71_06390 autoinducer-2 kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D CLM71_06395 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D CLM71_01050 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLM71_01055 high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D CLM71_01060 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D CLM71_01065 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLM71_01070 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLM71_22750 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CLM71_00265 hypothetical protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CLM71_14650 transcriptional regulator RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D CLM71_03405 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_12995 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_22120 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLM71_21560 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D CLM71_12520 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CLM71_04805 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CLM71_10455 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_17680 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_19295 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_19300 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_11430 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CLM71_11080 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12720 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12725 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12715 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CLM71_12710 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CLM71_12705 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CLM71_12700 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLM71_23735 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLM71_01365 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLM71_02015 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CLM71_21855 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLM71_04780 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLM71_03515 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLM71_01015 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLM71_23090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CLM71_03920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLM71_20370 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:serm02030] D CLM71_14220 methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CLM71_01895 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CLM71_00190 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CLM71_14215 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D CLM71_21610 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D CLM71_23515 ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D CLM71_00600 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CLM71_02590 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CLM71_14230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLM71_14225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLM71_14200 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLM71_14195 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CLM71_14205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLM71_14210 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLM71_14040 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLM71_14070 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLM71_14075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLM71_14240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CLM71_14235 motility protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:serm02040] D CLM71_14030 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CLM71_14035 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CLM71_14040 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLM71_14045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CLM71_14050 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLM71_14055 fliJ; flagellar biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ D CLM71_14060 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D CLM71_14065 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLM71_14070 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLM71_14075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLM71_14080 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D CLM71_14085 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLM71_14090 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLM71_14095 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CLM71_14180 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D CLM71_14185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLM71_14190 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CLM71_14155 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CLM71_14150 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CLM71_14145 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CLM71_14140 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CLM71_14135 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLM71_14130 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CLM71_14125 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CLM71_14120 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D CLM71_14115 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D CLM71_14110 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CLM71_14105 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CLM71_14100 flgL; flagellar hook-filament junction protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D CLM71_13990 flagellin FliC K02406 fliC; flagellin D CLM71_13995 flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D CLM71_14000 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CLM71_14005 flagella biosynthesis regulatory protein FliT K02423 fliT; flagellar protein FliT D CLM71_14240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CLM71_14235 motility protein MotB K02557 motB; chemotaxis protein MotB D CLM71_14160 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CLM71_14165 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D CLM71_13970 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CLM71_13980 flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D CLM71_20665 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CLM71_14250 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CLM71_14245 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLM71_21115 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CLM71_13985 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CLM71_03675 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D CLM71_21670 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:serm01501] D CLM71_07955 porin OmpC K09476 ompF; outer membrane pore protein F D CLM71_01145 porin K09476 ompF; outer membrane pore protein F D CLM71_16170 porin OmpC K09475 ompC; outer membrane pore protein C D CLM71_04895 muropeptide transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CLM71_09175 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CLM71_13450 class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D CLM71_11080 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12720 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12725 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12715 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CLM71_12710 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CLM71_12705 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CLM71_12700 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLM71_11420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_05120 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_11425 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_05115 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_11430 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CLM71_20355 anibiotic ABC transporter K12340 tolC; outer membrane protein D CLM71_20555 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CLM71_22280 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLM71_11380 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLM71_05415 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLM71_03440 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLM71_11385 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:serm01502] D CLM71_03480 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_06295 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_21535 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLM71_12920 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLM71_03450 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CLM71_03455 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLM71_03470 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:serm01503] D CLM71_09265 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CLM71_09270 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CLM71_00580 kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CLM71_04580 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CLM71_09850 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CLM71_09855 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CLM71_09860 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D CLM71_09865 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CLM71_09870 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CLM71_09875 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D CLM71_09880 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D CLM71_01970 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CLM71_01975 two-component system response regulator BasR K07771 basR; two-component system, OmpR family, response regulator BasR D CLM71_10750 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CLM71_10990 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CLM71_10985 peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CLM71_10980 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CLM71_10975 peptide ABC transporter ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein D CLM71_10970 peptide ABC transporter ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D CLM71_00985 serine 3-dehydrogenase K01406 prtC; serralysin [EC:3.4.24.40] D CLM71_18390 copper homeostasis/adhesion lipoprotein NlpE K06079 cutF; copper homeostasis protein (lipoprotein) D CLM71_23070 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CLM71_23065 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CLM71_01705 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_18650 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_17140 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_10630 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D CLM71_03605 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CLM71_18945 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CLM71_23450 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CLM71_22160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CLM71_11420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_05120 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_11425 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_05115 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_20355 anibiotic ABC transporter K12340 tolC; outer membrane protein D CLM71_20555 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CLM71_18470 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:serm01000] C 01001 Protein kinases [BR:serm01001] D CLM71_02925 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CLM71_07275 tyrosine-protein kinase Wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLM71_13850 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLM71_04715 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLM71_09265 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CLM71_22325 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CLM71_11225 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CLM71_23070 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CLM71_17470 two-component system sensor histidine kinase BaeA K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CLM71_01970 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CLM71_18980 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CLM71_19385 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLM71_05665 two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CLM71_20980 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CLM71_16575 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D CLM71_17080 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CLM71_10310 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CLM71_13875 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D CLM71_17260 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D CLM71_16185 phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D CLM71_16195 two-component system sensor histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D CLM71_03650 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CLM71_05895 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CLM71_19650 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CLM71_18220 histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D CLM71_13410 two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D CLM71_22155 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CLM71_16830 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CLM71_23400 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CLM71_17935 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLM71_14230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:serm01009] D CLM71_06165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_05170 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CLM71_14365 serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CLM71_02995 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:serm01002] D CLM71_03160 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CLM71_08355 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CLM71_05735 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CLM71_17730 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLM71_20790 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CLM71_09390 gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94] D CLM71_15935 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CLM71_10720 hydrolase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CLM71_09885 endopeptidase K13695 nlpC; probable lipoprotein NlpC D CLM71_16515 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CLM71_20990 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CLM71_23625 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CLM71_05570 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CLM71_04850 protein deglycase YajL K03152 thiJ; protein deglycase [EC:3.5.1.124] D CLM71_02660 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D CLM71_10630 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D CLM71_07935 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D CLM71_05935 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D CLM71_07975 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CLM71_22650 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D CLM71_12190 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CLM71_00985 serine 3-dehydrogenase K01406 prtC; serralysin [EC:3.4.24.40] D CLM71_18670 pitrilysin K01407 ptrA; protease III [EC:3.4.24.55] D CLM71_02330 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CLM71_17830 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D CLM71_11755 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLM71_16075 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLM71_17290 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CLM71_09245 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CLM71_04425 cytosol nonspecific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CLM71_11395 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32] D CLM71_08325 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D CLM71_13060 murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CLM71_18535 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CLM71_06285 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CLM71_01270 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CLM71_19115 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CLM71_03740 aminopeptidase K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D CLM71_02000 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLM71_09615 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CLM71_19195 metalloprotease K07387 K07387; metalloprotease [EC:3.4.24.-] D CLM71_17345 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D CLM71_18495 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CLM71_16700 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D CLM71_15060 DgsA anti-repressor MtfA K09933 mtfA; MtfA peptidase D CLM71_11180 serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D CLM71_03605 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CLM71_21030 serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D CLM71_21035 outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D CLM71_10885 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D CLM71_13535 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CLM71_05400 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_07515 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_10955 serine-type D-Ala-D-Ala carboxypeptidase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_11305 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D CLM71_02820 D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D CLM71_01980 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CLM71_04915 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CLM71_04925 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CLM71_08060 Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D CLM71_21570 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CLM71_09310 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CLM71_18015 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CLM71_13525 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D CLM71_09600 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CLM71_12840 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D CLM71_12555 protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D CLM71_01245 dipeptidase PepE K05995 pepE; dipeptidase E [EC:3.4.13.21] D CLM71_22405 rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D CLM71_22980 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D CLM71_07110 beta-aspartyl-peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CLM71_04755 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_11575 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CLM71_08290 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D CLM71_17485 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CLM71_02115 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D CLM71_02120 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D CLM71_21220 metalloprotease PmbA K03592 pmbA; PmbA protein D CLM71_21260 metalloprotease TldD K03568 tldD; TldD protein D CLM71_07550 ecotin K08276 eco; ecotin D CLM71_01735 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D CLM71_01730 FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:serm01003] D CLM71_00650 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D CLM71_20965 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CLM71_19345 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CLM71_22280 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLM71_13425 alpha/beta hydrolase K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] D CLM71_00765 lipopolysaccharide N-acetylmannosaminouronosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D CLM71_00755 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D CLM71_13855 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_00720 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_08930 glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D CLM71_02610 glycosyl transferase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CLM71_11350 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:serm01005] D CLM71_18470 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CLM71_18465 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CLM71_03500 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CLM71_18480 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CLM71_05290 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CLM71_07875 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CLM71_08975 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLM71_14925 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CLM71_13055 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D CLM71_08375 lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D CLM71_14015 lipid A hydroxylase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-] D CLM71_21365 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D CLM71_15930 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D CLM71_23190 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CLM71_09870 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CLM71_04580 phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CLM71_10750 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CLM71_00580 kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CLM71_13255 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CLM71_07905 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CLM71_21095 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CLM71_21090 arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CLM71_23140 lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D CLM71_23195 lipopolysaccharide biosynthesis protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-] D CLM71_23135 ADP-heptose--LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CLM71_23175 glycosyl transferase family 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D CLM71_13580 glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D CLM71_23150 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D CLM71_00535 O-antigen biosynthesis protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D CLM71_23170 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D CLM71_00530 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D CLM71_04360 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CLM71_18350 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CLM71_20610 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CLM71_23130 ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CLM71_00760 O-antigen assembly polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D CLM71_13855 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_00720 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CLM71_13860 UDP-N-acetylglucosamine 4-epimerase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:serm01011] D CLM71_21045 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CLM71_01320 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CLM71_03475 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CLM71_03460 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CLM71_03445 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CLM71_03480 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_06295 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CLM71_21535 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLM71_12920 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CLM71_22865 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CLM71_03455 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CLM71_03470 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CLM71_20635 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLM71_07540 undecaprenyl-diphosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CLM71_13165 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CLM71_22280 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CLM71_19345 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CLM71_11380 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLM71_05415 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CLM71_03440 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLM71_11385 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLM71_05400 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_07515 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_10955 serine-type D-Ala-D-Ala carboxypeptidase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CLM71_01980 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CLM71_02820 D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D CLM71_11305 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D CLM71_20965 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CLM71_02660 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D CLM71_10630 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D CLM71_07935 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D CLM71_16700 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D CLM71_10720 hydrolase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CLM71_15935 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CLM71_13060 murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CLM71_03035 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CLM71_18630 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D CLM71_03835 murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D CLM71_12965 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D CLM71_19725 membrane-bound lytic murein transglycosylase MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D CLM71_04230 murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D CLM71_20465 lytic transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D CLM71_09725 lytic transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D CLM71_17945 membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D CLM71_09100 cell division protein YceG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CLM71_05405 endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CLM71_01705 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_18650 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_17140 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_07665 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_10635 murein lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:serm01004] D CLM71_09075 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLM71_11565 transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CLM71_09070 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CLM71_04200 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLM71_16675 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CLM71_04215 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_09090 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_18915 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CLM71_04210 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11200 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_09080 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_11495 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_18900 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_12050 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_00305 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CLM71_08055 bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CLM71_18475 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLM71_11500 beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CLM71_11550 short-chain dehydrogenase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104] D CLM71_11270 enoyl-[acyl-carrier-protein] reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D CLM71_05265 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CLM71_04995 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CLM71_12645 acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D CLM71_04945 thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D CLM71_15400 polyketide synthase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D CLM71_15395 non-ribosomal peptide synthetase K04784 irp2; yersiniabactin nonribosomal peptide synthetase D CLM71_01510 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CLM71_03405 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_12995 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_21580 glycerol-3-phosphate 1-O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CLM71_09065 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CLM71_20645 acyl-phosphate--glycerol-3-phosphate O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CLM71_20500 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:serm01008] D CLM71_12100 type III polyketide synthase K16424 dpgA; 3,5-dihydroxyphenylacetyl-CoA synthase [EC:2.3.1.246] D CLM71_10245 MbtH family protein K05375 mbtH; MbtH protein D CLM71_16990 MbtH family protein K05375 mbtH; MbtH protein D CLM71_16935 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D CLM71_15310 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D CLM71_16940 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D CLM71_16985 entF; non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D CLM71_15400 polyketide synthase K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase D CLM71_15395 non-ribosomal peptide synthetase K04784 irp2; yersiniabactin nonribosomal peptide synthetase D CLM71_15415 (2,3-dihydroxybenzoyl)adenylate synthase K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-] D CLM71_10250 non-ribosomal peptide synthetase K24101 vabF; L-arginine---[L-arginyl-carrier protein] ligase [EC:6.2.1.63] D CLM71_12090 enoyl-CoA hydratase K16427 dpgC; (3,5-dihydroxyphenyl)acetyl-CoA 1,2-dioxygenase [EC:1.13.11.80] D CLM71_13480 FAD-dependent oxidoreductase K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-] D CLM71_15405 thiazolinyl imide reductase K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component D CLM71_15410 thioesterase K05374 irp4; yersiniabactin synthetase, thioesterase component D CLM71_12105 transcriptional regulator K16423 hpgT; (S)-3,5-dihydroxyphenylglycine transaminase [EC:2.6.1.103] D CLM71_12095 enoyl-CoA hydratase K16425 dpgB; isomerase DpgB D CLM71_12085 enoyl-CoA hydratase K16426 dpgD; dehydration protein DpgD C 01006 Prenyltransferases [BR:serm01006] D CLM71_04835 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CLM71_01945 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CLM71_18505 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CLM71_01715 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CLM71_22990 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CLM71_21585 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CLM71_04870 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:serm01007] D CLM71_16905 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLM71_05600 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CLM71_19370 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CLM71_10825 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLM71_06800 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLM71_22220 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLM71_05300 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLM71_13160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLM71_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLM71_03155 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLM71_02320 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLM71_05445 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLM71_19010 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLM71_13105 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLM71_07960 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CLM71_17795 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLM71_00145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CLM71_00150 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CLM71_07795 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLM71_18380 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLM71_09770 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLM71_03860 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLM71_15295 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLM71_09795 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLM71_09800 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLM71_20240 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CLM71_07950 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CLM71_00095 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D CLM71_16390 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CLM71_16810 alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D CLM71_21505 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CLM71_04325 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D CLM71_06310 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88] D CLM71_11335 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_07440 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CLM71_23125 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CLM71_06010 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CLM71_13150 aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_12350 transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CLM71_22135 bifunctional succinylornithine transaminase/acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CLM71_13765 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D CLM71_20760 4-aminobutyrate--2-oxoglutarate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CLM71_11850 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D CLM71_06000 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CLM71_03570 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CLM71_22785 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CLM71_09645 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D CLM71_07840 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CLM71_08320 aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D CLM71_09850 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CLM71_00745 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:serm00194] D CLM71_23615 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CLM71_23610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CLM71_23605 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CLM71_23600 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CLM71_23595 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CLM71_23590 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CLM71_23585 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CLM71_23580 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLM71_23575 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:serm03000] D CLM71_12430 arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D CLM71_02795 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D CLM71_15390 AraC family transcriptional regulator K05372 ybtA; AraC family transcriptional regulator D CLM71_02655 AraC family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CLM71_03055 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CLM71_07040 AraC family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CLM71_04495 DNA-binding transcriptional regulator RamA K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D CLM71_04550 transcriptional regulator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB D CLM71_20320 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT D CLM71_10475 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT D CLM71_11345 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D CLM71_09825 hypothetical protein K07506 K07506; AraC family transcriptional regulator D CLM71_17435 DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CLM71_16085 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D CLM71_18605 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLM71_06315 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLM71_13235 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLM71_15685 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLM71_14635 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLM71_12180 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CLM71_22760 HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D CLM71_01150 HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D CLM71_03140 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D CLM71_22895 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CLM71_19150 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CLM71_03400 transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D CLM71_12540 HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D CLM71_08400 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D CLM71_19495 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D CLM71_09520 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway D CLM71_06340 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_22540 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_10465 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_17670 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_17660 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_11090 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_15630 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_02890 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_15085 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D CLM71_17605 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D CLM71_21255 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D CLM71_10760 LysR family transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D CLM71_22820 HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D CLM71_11640 LysR family transcriptional regulator K26290 palR; LysR family transcriptional regulator, regulator of pal gene cluster D CLM71_07530 DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D CLM71_22410 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D CLM71_13390 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D CLM71_04520 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D CLM71_06740 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_00335 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_06775 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_08870 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_18760 HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_11995 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_15160 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_23505 transcriptional regulator RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_21480 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CLM71_00120 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D CLM71_22970 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D CLM71_03420 catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D CLM71_21530 LacI family transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D CLM71_20400 transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D CLM71_02265 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D CLM71_10705 HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D CLM71_22460 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D CLM71_05305 LacI family transcriptional regulator K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D CLM71_12340 Mal regulon transcriptional regulator MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D CLM71_02235 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D CLM71_09445 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D CLM71_20475 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D CLM71_12935 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D CLM71_19560 pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CLM71_07170 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CLM71_18765 transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D CLM71_20825 transcriptional regulator ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D CLM71_00045 transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D CLM71_20765 decarboxylase K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CLM71_09690 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CLM71_17515 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D CLM71_06455 GntR family transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism D CLM71_06355 GntR family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator D CLM71_06985 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D CLM71_05125 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D CLM71_23235 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CLM71_10745 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D CLM71_11905 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D CLM71_21430 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D CLM71_10485 TetR/AcrR family transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA D CLM71_06425 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D CLM71_22885 HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D CLM71_06110 transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D CLM71_23555 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CLM71_06650 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLM71_07775 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLM71_02150 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLM71_11800 AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes D CLM71_04970 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D CLM71_22750 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CLM71_00265 hypothetical protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CLM71_14650 transcriptional regulator RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D CLM71_07005 LuxR family transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D CLM71_18855 hypothetical protein K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D CLM71_22395 HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D CLM71_10800 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D CLM71_18270 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D CLM71_00570 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CLM71_06140 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CLM71_11945 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CLM71_05235 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D CLM71_21815 Zn(2+)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D CLM71_05620 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CLM71_21560 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D CLM71_21675 acetate operon transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D CLM71_14540 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D CLM71_09625 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D CLM71_15645 transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D CLM71_22120 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CLM71_11280 transcriptional regulator FNR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CLM71_17870 Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CLM71_01750 HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D CLM71_14610 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CLM71_10880 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D CLM71_13040 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D CLM71_01325 biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CLM71_21355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CLM71_03040 trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D CLM71_01930 DNA-binding protein K07724 ner; Ner family transcriptional regulator D CLM71_03360 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator D CLM71_03005 trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D CLM71_15810 transcriptional regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D CLM71_09385 transcriptional regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D CLM71_09990 transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D CLM71_12080 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D CLM71_03610 carbohydrate diacid regulon transcriptional regulator CdaR K02647 cdaR; carbohydrate diacid regulator D CLM71_05180 XRE family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D CLM71_05945 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein D CLM71_00040 hypothetical protein K21829 dauR; D-arginine utilization repressor D CLM71_14175 transcriptional regulator K07726 K07726; putative transcriptional regulator D CLM71_22955 met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D CLM71_13935 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CLM71_02520 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D CLM71_04905 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CLM71_01240 transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D CLM71_01920 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CLM71_05580 transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D CLM71_12285 transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D CLM71_00175 MltR family transcriptional regulator K02562 mtlR; mannitol operon repressor D CLM71_11055 transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D CLM71_18440 transcriptional regulator CadC K03765 cadC; transcriptional activator of cad operon D CLM71_17330 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D CLM71_15015 paaX; phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D CLM71_11020 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D CLM71_11035 envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D CLM71_21200 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D CLM71_15430 transcriptional regulator K07733 alpA; prophage regulatory protein D CLM71_19630 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D CLM71_19365 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CLM71_04800 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CLM71_04440 sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl D CLM71_08605 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D CLM71_09995 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D CLM71_03425 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:serm03021] D CLM71_21830 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLM71_01395 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLM71_01400 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLM71_23330 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CLM71_20665 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CLM71_03825 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CLM71_18045 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CLM71_01030 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D CLM71_21115 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CLM71_13985 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CLM71_03320 RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D CLM71_02035 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CLM71_04815 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CLM71_01370 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CLM71_21005 stringent starvation protein A K03599 sspA; stringent starvation protein A D CLM71_21000 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D CLM71_18040 anti-sigma-E factor RseA K03597 rseA; sigma-E factor negative regulatory protein RseA D CLM71_18035 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D CLM71_18030 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D CLM71_19365 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CLM71_01985 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CLM71_22335 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D CLM71_00715 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CLM71_18410 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:serm03019] D CLM71_09040 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CLM71_21275 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CLM71_18010 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLM71_01755 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLM71_01670 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CLM71_00705 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CLM71_06115 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CLM71_02070 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLM71_00900 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLM71_03675 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLM71_02060 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CLM71_00715 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CLM71_23050 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_12370 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CLM71_03125 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CLM71_01595 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLM71_01720 RNA chaperone Hfq K03666 hfq; host factor-I protein D CLM71_17410 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CLM71_19375 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CLM71_18720 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CLM71_03865 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CLM71_21300 RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD D CLM71_22995 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D CLM71_02300 ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B D CLM71_21130 RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D CLM71_11175 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CLM71_19350 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:serm03011] D CLM71_07855 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CLM71_18530 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CLM71_21925 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CLM71_21835 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CLM71_21870 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CLM71_01805 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CLM71_21985 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CLM71_21885 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CLM71_21010 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CLM71_21960 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CLM71_21840 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CLM71_21990 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CLM71_21845 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CLM71_21890 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CLM71_02055 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CLM71_03925 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CLM71_21910 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CLM71_01815 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CLM71_21935 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CLM71_03145 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CLM71_20655 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CLM71_01380 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CLM71_21940 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CLM71_21955 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CLM71_21950 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CLM71_21895 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CLM71_21880 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CLM71_01820 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CLM71_01385 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CLM71_01375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CLM71_01390 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CLM71_21015 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CLM71_21905 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CLM71_21860 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CLM71_21920 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CLM71_21825 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CLM71_21875 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CLM71_03940 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CLM71_09785 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CLM71_01950 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CLM71_21930 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CLM71_21945 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CLM71_21900 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CLM71_01955 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CLM71_23215 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CLM71_21915 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CLM71_21865 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CLM71_05110 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLM71_22960 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CLM71_09060 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CLM71_23210 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CLM71_23750 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CLM71_09780 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CLM71_21850 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CLM71_05105 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CLM71_15975 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CLM71_01315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLM71_01295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_21750 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_23490 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_18345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_04125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_22840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_18330 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_23480 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_21740 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:serm03009] D CLM71_18010 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLM71_01670 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CLM71_18005 GTPase Era K03595 era; GTPase D CLM71_01965 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D CLM71_19365 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CLM71_02035 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CLM71_04815 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CLM71_01370 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CLM71_15965 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CLM71_03290 ksgA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CLM71_21795 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CLM71_02900 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D CLM71_01010 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CLM71_19620 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CLM71_09575 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D CLM71_23570 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CLM71_03430 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CLM71_20940 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CLM71_22645 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D CLM71_13635 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CLM71_01760 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CLM71_01995 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CLM71_06845 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D CLM71_20775 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D CLM71_05420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CLM71_08120 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CLM71_22675 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D CLM71_08020 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D CLM71_18595 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D CLM71_17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CLM71_03655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CLM71_07625 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D CLM71_03315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLM71_06680 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLM71_12570 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CLM71_09045 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CLM71_04095 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CLM71_09300 23S rRNA pseudouridine(2457) synthase RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D CLM71_19275 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CLM71_18290 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D CLM71_02915 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CLM71_13180 30S ribosomal protein S5 alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D CLM71_07610 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D CLM71_03930 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CLM71_07475 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CLM71_07825 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D CLM71_21345 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CLM71_16710 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D CLM71_09260 50S ribosomal protein L16 arginine hydroxylase K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D CLM71_09040 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CLM71_21275 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CLM71_19635 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CLM71_13560 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D CLM71_02070 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CLM71_18060 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D CLM71_01665 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CLM71_17780 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D CLM71_01725 GTPase HflX K03665 hflX; GTPase D CLM71_21765 L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CLM71_23335 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CLM71_02045 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CLM71_02030 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CLM71_05315 ribosome-associated protein K14761 rlbA; ribosome-associated protein D CLM71_05425 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein D CLM71_05515 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D CLM71_01990 ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D CLM71_00180 hypothetical protein K14762 yibL; ribosome-associated protein D CLM71_21225 hypothetical protein K09889 yjgA; ribosome-associated protein D CLM71_08045 ribosome modulation factor K03812 rmf; ribosome modulation factor D CLM71_21120 ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor D CLM71_04080 raiA; ribosomal subunit interface protein K05809 raiA; ribosome-associated inhibitor A D CLM71_13320 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D CLM71_09055 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:serm03016] D CLM71_20630 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CLM71_16905 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLM71_18380 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CLM71_03155 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CLM71_05445 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLM71_07215 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CLM71_05600 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CLM71_13160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLM71_19010 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CLM71_13105 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLM71_03860 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLM71_15295 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CLM71_07960 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CLM71_09770 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CLM71_07795 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CLM71_05300 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CLM71_02320 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CLM71_17795 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CLM71_09795 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CLM71_09800 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CLM71_10825 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLM71_06800 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLM71_22220 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CLM71_23370 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CLM71_09155 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLM71_19710 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CLM71_18375 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D CLM71_16550 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CLM71_02050 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CLM71_03805 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D CLM71_20245 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_17865 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_21765 L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CLM71_01715 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CLM71_23730 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CLM71_23565 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CLM71_12830 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CLM71_01845 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CLM71_23745 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CLM71_20935 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CLM71_10730 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D CLM71_23245 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CLM71_10945 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D CLM71_12990 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CLM71_19355 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CLM71_03015 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D CLM71_00145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CLM71_00150 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CLM71_19370 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CLM71_05220 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CLM71_17950 tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CLM71_21555 tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D CLM71_21350 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CLM71_06120 tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D CLM71_05525 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CLM71_13130 carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D CLM71_13135 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D CLM71_07915 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D CLM71_03070 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D CLM71_22875 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D CLM71_03935 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CLM71_18290 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D CLM71_23340 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D CLM71_17875 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D CLM71_23075 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CLM71_18055 tRNA (adenosine(37)-N6)-methyltransferase TrmM K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D CLM71_18560 tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D CLM71_03315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLM71_06680 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CLM71_09285 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CLM71_11110 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CLM71_00960 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CLM71_21995 sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CLM71_22000 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CLM71_22005 sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CLM71_08130 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CLM71_17855 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D CLM71_19050 tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D CLM71_02305 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D CLM71_16680 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D CLM71_04770 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CLM71_04950 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CLM71_03720 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CLM71_03715 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CLM71_18580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CLM71_01690 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D CLM71_12665 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D CLM71_12825 tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D CLM71_04775 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CLM71_04845 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CLM71_18420 tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CLM71_17305 tRNA cytosine(34) acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D CLM71_13005 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CLM71_20650 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CLM71_01700 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CLM71_18625 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CLM71_01755 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CLM71_02060 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:serm03012] D CLM71_12490 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1 D CLM71_02040 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CLM71_09775 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CLM71_22045 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CLM71_18525 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CLM71_21975 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CLM71_01360 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CLM71_11610 fusA; elongation factor G K02355 fusA; elongation factor G D CLM71_21980 fusA; elongation factor G K02355 fusA; elongation factor G D CLM71_00240 selenocysteinyl-tRNA-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor D CLM71_13275 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CLM71_18515 ribosome recycling factor K02838 frr; ribosome recycling factor D CLM71_13270 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CLM71_13310 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CLM71_07750 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CLM71_15905 elongation factor P-like protein YeiP K02356 efp; elongation factor P D CLM71_01610 efp; elongation factor P K02356 efp; elongation factor P D CLM71_01650 elongation factor P lysine(34) lysyltransferase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D CLM71_01605 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D CLM71_16690 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D CLM71_02930 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D CLM71_21810 ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor D CLM71_18395 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:serm03110] D CLM71_07745 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D CLM71_04105 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CLM71_04920 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CLM71_22985 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D CLM71_05170 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CLM71_03125 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CLM71_17845 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D CLM71_17440 molecular chaperone K04046 yegD; hypothetical chaperone protein D CLM71_01595 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLM71_03130 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CLM71_20345 curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D CLM71_03310 co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D CLM71_17850 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D CLM71_22305 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D CLM71_18085 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CLM71_00085 heat shock protein IbpA K04080 ibpA; molecular chaperone IbpA D CLM71_00090 heat shock chaperone IbpB K04081 ibpB; molecular chaperone IbpB D CLM71_22300 heat-shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D CLM71_01590 groES; co-chaperone GroES K04078 groES; chaperonin GroES D CLM71_03605 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CLM71_02000 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CLM71_23580 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CLM71_19995 molecular chaperone K07346 fimC; fimbrial chaperone protein D CLM71_23090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CLM71_22720 ATP-independent periplasmic protein-refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy D CLM71_23060 cpxP; stress adaptor protein CpxP K06006 cpxP; periplasmic protein CpxP/Spy D CLM71_02270 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLM71_05615 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D CLM71_22160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CLM71_05295 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CLM71_04935 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D CLM71_22015 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D CLM71_01835 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D CLM71_03165 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D CLM71_22025 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D CLM71_00690 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CLM71_03300 peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D CLM71_00710 trxA; thioredoxin K03671 TXN; thioredoxin D CLM71_18295 thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D CLM71_05255 co-chaperone YbbN K05838 ybbN; putative thioredoxin D CLM71_07600 glutaredoxin K03674 grxA; glutaredoxin 1 D CLM71_13190 grxB; glutaredoxin, GrxB family K03675 grxB; glutaredoxin 2 D CLM71_23095 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D CLM71_10725 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CLM71_18945 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CLM71_23450 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CLM71_12945 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D CLM71_19025 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CLM71_01565 dipZ; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D CLM71_16760 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:serm04131] D CLM71_17820 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CLM71_12865 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_12010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_05910 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CLM71_13045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_10640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_05170 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:serm03051] D CLM71_05170 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:serm03032] D CLM71_04245 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CLM71_01460 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CLM71_04930 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CLM71_09805 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CLM71_07860 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CLM71_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLM71_10015 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLM71_21540 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CLM71_08625 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D CLM71_20660 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CLM71_21455 single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein D CLM71_18455 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLM71_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLM71_02325 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLM71_05435 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLM71_09110 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLM71_04250 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_16105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_05155 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLM71_02910 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CLM71_13520 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CLM71_18460 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CLM71_23440 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLM71_23320 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_17045 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_12300 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein D CLM71_10080 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_14700 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_22235 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_05640 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D CLM71_17355 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D CLM71_16200 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CLM71_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CLM71_20505 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLM71_20530 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLM71_12545 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CLM71_12820 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:serm03036] D CLM71_18010 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CLM71_12750 DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS D CLM71_01460 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CLM71_04930 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CLM71_09805 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CLM71_07860 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CLM71_20345 curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D CLM71_20340 chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM D CLM71_02655 AraC family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CLM71_03055 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CLM71_07040 AraC family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CLM71_00005 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CLM71_20955 DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein D CLM71_08115 heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D CLM71_06880 DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein D CLM71_21355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CLM71_01720 RNA chaperone Hfq K03666 hfq; host factor-I protein D CLM71_19150 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CLM71_06650 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLM71_07775 leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLM71_02150 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CLM71_15980 nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein D CLM71_07930 chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB D CLM71_07925 chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE D CLM71_07920 chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF D CLM71_03490 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CLM71_03790 cell division protein FtsB K05589 ftsB; cell division protein FtsB D CLM71_01020 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLM71_03440 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLM71_11385 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CLM71_07780 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CLM71_03435 cell division protein FtsL K03586 ftsL; cell division protein FtsL D CLM71_22975 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN D CLM71_03485 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D CLM71_03465 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CLM71_01025 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CLM71_03495 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLM71_17050 cell division protein ZipA K03528 zipA; cell division protein ZipA D CLM71_19125 cell division protein ZapA K09888 zapA; cell division protein ZapA D CLM71_23000 septal ring assembly protein ZapB K09892 zapB; cell division protein ZapB D CLM71_08010 cell division protein ZapC K18657 zapC; cell division protein ZapC D CLM71_03530 cell division protein ZapD K18778 zapD; cell division protein ZapD D CLM71_21020 cell division protein ZapE K06916 zapE; cell division protein ZapE D CLM71_13955 cell division protein ZapE K06916 zapE; cell division protein ZapE D CLM71_01830 Opacity-associated protein A domain protein K07269 ytfB; cell division protein YtfB D CLM71_01705 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_18650 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_17140 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_11420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_05120 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_12975 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CLM71_12980 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CLM71_12985 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CLM71_08075 cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA D CLM71_23235 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CLM71_05640 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D CLM71_21295 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLM71_21290 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CLM71_21285 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CLM71_05410 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D CLM71_06335 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D CLM71_20505 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLM71_20530 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLM71_23565 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CLM71_23570 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CLM71_00850 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CLM71_19030 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CLM71_07220 iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D CLM71_23430 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:serm03400] D CLM71_11285 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CLM71_05695 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CLM71_18080 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CLM71_19715 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CLM71_10895 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CLM71_03520 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CLM71_06560 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CLM71_07800 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CLM71_15880 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CLM71_23230 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CLM71_15305 DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CLM71_20670 G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CLM71_17435 DNA-3-methyladenine glycosylase 2 K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CLM71_00130 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CLM71_23205 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CLM71_12805 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CLM71_15860 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CLM71_01450 deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D CLM71_19020 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CLM71_23320 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_17045 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CLM71_23440 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CLM71_21460 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CLM71_06035 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CLM71_08520 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CLM71_00860 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CLM71_01395 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CLM71_01400 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CLM71_21830 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CLM71_23330 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CLM71_09195 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CLM71_03830 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CLM71_01710 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D CLM71_18725 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D CLM71_15775 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CLM71_17740 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CLM71_04840 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CLM71_13530 exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D CLM71_18455 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CLM71_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CLM71_02325 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CLM71_05435 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CLM71_09110 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CLM71_04250 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_16105 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CLM71_05155 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CLM71_02910 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CLM71_13520 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CLM71_21455 single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein D CLM71_10080 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_14700 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_22235 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_18665 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CLM71_18675 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CLM71_18660 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CLM71_03850 recA; recombinase RecA K03553 recA; recombination protein RecA D CLM71_13085 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CLM71_13080 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CLM71_13090 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CLM71_08640 hypothetical protein K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D CLM71_22965 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CLM71_01810 primosomal replication protein N K02686 priB; primosomal replication protein N D CLM71_05140 prephenate dehydrogenase K04067 priC; primosomal replication protein N'' D CLM71_04700 exonuclease subunit SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D CLM71_04705 exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D CLM71_03000 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CLM71_00015 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D CLM71_23345 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CLM71_18000 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CLM71_05165 recombination protein RecR K06187 recR; recombination protein RecR D CLM71_18095 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CLM71_04690 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D CLM71_15970 ATP-dependent helicase K19789 radD; DNA repair protein RadD D CLM71_22145 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D CLM71_16200 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CLM71_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CLM71_12545 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CLM71_01460 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CLM71_04930 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CLM71_21355 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CLM71_09805 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CLM71_07860 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CLM71_00900 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CLM71_12750 DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS D CLM71_04420 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CLM71_09315 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D CLM71_09310 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CLM71_21570 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D CLM71_03325 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D CLM71_09025 DNA damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I D CLM71_03855 recombination regulator RecX K03565 recX; regulatory protein D CLM71_00695 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D CLM71_08095 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D CLM71_13010 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CLM71_06645 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CLM71_16210 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLM71_18205 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CLM71_16215 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CLM71_18210 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:serm03029] D CLM71_02040 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CLM71_09775 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CLM71_18525 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CLM71_21975 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CLM71_01360 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CLM71_11610 fusA; elongation factor G K02355 fusA; elongation factor G D CLM71_21980 fusA; elongation factor G K02355 fusA; elongation factor G D CLM71_18005 GTPase Era K03595 era; GTPase D CLM71_10825 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CLM71_05445 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CLM71_13105 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CLM71_13160 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CLM71_19075 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CLM71_08405 endonuclease K01173 ENDOG; endonuclease G, mitochondrial D CLM71_21455 single-stranded DNA-binding protein SSB1 K03111 ssb; single-strand DNA-binding protein D CLM71_18490 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CLM71_03125 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CLM71_18085 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CLM71_01595 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLM71_01590 groES; co-chaperone GroES K04078 groES; chaperonin GroES D CLM71_03130 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CLM71_20245 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_17865 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_17850 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D CLM71_10725 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D CLM71_07220 iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D CLM71_04870 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CLM71_23735 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLM71_05170 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:serm02000] D CLM71_15385 ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D CLM71_15380 ABC transporter ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D CLM71_07870 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CLM71_04975 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CLM71_04980 multidrug ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CLM71_01130 protein tyrosine phosphatase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CLM71_07350 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D CLM71_07760 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CLM71_07765 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CLM71_18925 macrolide ABC transporter permease/ATP-binding protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CLM71_07730 macrolide ABC transporter ATP-binding protein/permease MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CLM71_18835 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D CLM71_18830 ABC transporter ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D CLM71_08025 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CLM71_17110 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D CLM71_23045 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CLM71_17105 molybdate ABC transporter permease subunit K02046 cysU; sulfate/thiosulfate transport system permease protein D CLM71_17100 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D CLM71_17095 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CLM71_19810 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLM71_05955 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CLM71_05960 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D CLM71_05965 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CLM71_05940 molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D CLM71_13920 nitrate/bicarbonate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D CLM71_13915 ntrB; nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein D CLM71_13910 nitrate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D CLM71_22080 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CLM71_22070 taurine transporter subunit K15552 tauC; taurine transport system permease protein D CLM71_22075 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CLM71_07995 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15135 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15105 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_15140 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CLM71_07985 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D CLM71_15145 sulfonate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D CLM71_07980 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CLM71_15150 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CLM71_03355 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D CLM71_03350 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D CLM71_03345 thiQ; thiamine ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CLM71_09225 spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CLM71_09230 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D CLM71_09235 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D CLM71_09240 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CLM71_18245 proline/glycine betaine ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D CLM71_18240 proline/glycine betaine ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D CLM71_18235 proline/glycine betaine ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CLM71_06595 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CLM71_12255 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CLM71_06600 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_06610 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_12250 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_12260 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CLM71_06605 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLM71_12265 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CLM71_21610 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D CLM71_21615 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D CLM71_21620 maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D CLM71_21605 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLM71_11665 ABC transporter K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CLM71_11645 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D CLM71_11650 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D CLM71_11655 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D CLM71_12445 sugar ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D CLM71_12435 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D CLM71_12440 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D CLM71_00320 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D CLM71_00330 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D CLM71_00325 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D CLM71_23515 ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D CLM71_23520 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D CLM71_23525 ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CLM71_19850 ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D CLM71_19835 sugar ABC transporter permease K17203 eryF; erythritol transport system permease protein D CLM71_19840 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D CLM71_01080 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CLM71_01085 sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CLM71_01090 sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CLM71_01095 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CLM71_22525 iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D CLM71_22530 iron ABC transporter ATP-binding protein FetA K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D CLM71_21065 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CLM71_21070 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CLM71_21075 phospholipid ABC transporter ATP-binding protein MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CLM71_21060 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CLM71_21055 anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein D CLM71_04720 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D CLM71_23640 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CLM71_17405 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D CLM71_23645 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CLM71_17400 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CLM71_23650 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CLM71_17395 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLM71_23655 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CLM71_06470 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CLM71_06475 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLM71_06480 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CLM71_06465 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CLM71_06305 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D CLM71_16495 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D CLM71_16500 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D CLM71_16490 histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_16505 lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT K10014 hisJ; histidine transport system substrate-binding protein D CLM71_06870 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein D CLM71_06865 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D CLM71_06860 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_07630 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CLM71_07645 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D CLM71_07635 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D CLM71_07640 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D CLM71_07650 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_05500 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D CLM71_05490 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D CLM71_05495 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D CLM71_05485 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CLM71_13970 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CLM71_13965 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D CLM71_13960 L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D CLM71_01050 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein D CLM71_01055 high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D CLM71_01060 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D CLM71_01065 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D CLM71_01070 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D CLM71_06190 lipoprotein NlpA K02073 metQ; D-methionine transport system substrate-binding protein D CLM71_12030 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CLM71_18365 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CLM71_18360 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D CLM71_18355 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CLM71_06515 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CLM71_06520 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D CLM71_06525 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D CLM71_06530 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D CLM71_06535 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D CLM71_06025 ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D CLM71_03785 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLM71_08300 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLM71_15165 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLM71_23670 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CLM71_03780 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLM71_08305 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLM71_08310 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLM71_23675 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLM71_23680 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CLM71_03775 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLM71_08315 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLM71_15175 peptide ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CLM71_11080 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12720 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12725 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CLM71_12715 oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CLM71_12710 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CLM71_12705 oppD; ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CLM71_12700 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CLM71_00600 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CLM71_02590 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CLM71_00605 dipeptide ABC transporter permease DppB K12369 dppB; dipeptide transport system permease protein D CLM71_00610 dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein D CLM71_00615 dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D CLM71_00620 dppF; dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D CLM71_10990 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CLM71_10985 peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CLM71_10980 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CLM71_10975 peptide ABC transporter ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein D CLM71_10970 peptide ABC transporter ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein D CLM71_07120 glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein D CLM71_07125 glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D CLM71_07130 glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein D CLM71_07115 glutathione ABC transporter ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein D CLM71_15950 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D CLM71_19330 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CLM71_19325 Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CLM71_19335 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CLM71_09915 hemin ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D CLM71_09910 iron ABC transporter K25133 hmuU; heme transport system permease protein D CLM71_09905 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D CLM71_10260 Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CLM71_16950 Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CLM71_16960 Fe(3+)-siderophore ABC transporter permease K23186 fepD; iron-siderophore transport system permease protein D CLM71_16965 iron ABC transporter permease K23187 fepG; iron-siderophore transport system permease protein D CLM71_16970 fecE; Fe(3+)-dicitrate ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CLM71_04655 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CLM71_01165 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CLM71_09760 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CLM71_01170 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CLM71_15835 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CLM71_15830 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CLM71_01160 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CLM71_03590 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D CLM71_09835 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D CLM71_09845 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D CLM71_13065 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CLM71_13075 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D CLM71_13070 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CLM71_09715 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D CLM71_09705 hypothetical protein K11605 sitC; manganese/iron transport system permease protein D CLM71_09700 iron ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D CLM71_09710 iron ABC transporter permease K11607 sitB; manganese/iron transport system ATP-binding protein D CLM71_05100 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CLM71_05095 iron ABC transporter K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CLM71_05090 ABC transporter K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D CLM71_07380 ABC transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D CLM71_07385 sugar ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CLM71_02335 lipopolysaccharide ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CLM71_02340 lipopolysaccharide ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CLM71_21110 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CLM71_06090 hypothetical protein K25180 ybhR; drug efflux transport system permease protein D CLM71_06095 hypothetical protein K25181 ybhS; drug efflux transport system permease protein D CLM71_06100 multidrug ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D CLM71_06105 secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG D CLM71_09200 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CLM71_09210 lipoprotein-releasing system transmembrane subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D CLM71_09205 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CLM71_16775 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D CLM71_16780 heme ABC transporter permease K02195 ccmC; heme exporter protein C D CLM71_16785 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D CLM71_16790 heme ABC transporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D CLM71_01025 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CLM71_01020 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CLM71_02105 antibiotic ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CLM71_02110 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CLM71_19415 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CLM71_01550 mannose-1-phosphate guanyltransferase K01992 ABC-2.P; ABC-2 type transport system permease protein D CLM71_19420 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLM71_01545 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CLM71_11545 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CLM71_05275 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CLM71_11535 lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLM71_05270 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CLM71_10610 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D CLM71_12420 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CLM71_17035 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CLM71_00675 Anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CLM71_10675 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D CLM71_15695 FMN/FAD transporter K26937 dinF; MATE family, multidrug efflux pump D CLM71_21565 MATE family efflux transporter DinF K26937 dinF; MATE family, multidrug efflux pump D CLM71_19600 MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D CLM71_12075 MFS transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D CLM71_22515 MFS transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D CLM71_03185 lacY; MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease D CLM71_09470 MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease D CLM71_04530 lacY; MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease D CLM71_02860 glucose/galactose MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D CLM71_03370 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D CLM71_12115 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D CLM71_19805 citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D CLM71_18320 alpha-ketoglutarate transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D CLM71_19930 proline/glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CLM71_08890 proline/glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CLM71_11900 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CLM71_09475 metabolite-proton symporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CLM71_03120 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CLM71_17510 MFS transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D CLM71_19790 MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D CLM71_16845 oxalate/formate antiport family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D CLM71_11585 oxlT; oxalate/formate MFS antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D CLM71_22805 MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter D CLM71_03620 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D CLM71_17750 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D CLM71_20820 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D CLM71_17505 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D CLM71_00065 MFS transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter D CLM71_00070 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D CLM71_02790 hpaX; 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease D CLM71_06450 MFS transporter K23016 lgoT; MFS transporter, ACS family, L-galactonate transporter D CLM71_03710 aromatic acid/H+ symport family MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D CLM71_09540 aromatic acid/H+ symport family MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D CLM71_10470 MFS transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D CLM71_20315 MFS transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D CLM71_00345 cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CLM71_17900 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D CLM71_00925 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D CLM71_23715 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CLM71_20910 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CLM71_13870 nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CLM71_18745 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D CLM71_10255 enterobactin transporter EntS K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D CLM71_16955 enterobactin transporter EntS K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D CLM71_04895 muropeptide transporter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CLM71_12915 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CLM71_15960 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CLM71_05365 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CLM71_23020 multidrug transporter EmrD K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D CLM71_15710 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D CLM71_08965 multidrug transporter MdtG K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D CLM71_06820 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CLM71_19950 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CLM71_18805 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CLM71_17645 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CLM71_00300 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CLM71_15790 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D CLM71_18285 emrB; MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D CLM71_12680 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CLM71_09620 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D CLM71_05210 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D CLM71_12295 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CLM71_07805 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D CLM71_15375 MFS transporter K05373 ybtX; MFS transporter, putative signal transducer D CLM71_22190 MFS transporter TsgA K06141 tsgA; MFS transporter, TsgA protein D CLM71_15705 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CLM71_17070 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CLM71_18715 phosphoenolpyruvate--protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D CLM71_17065 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CLM71_21135 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D CLM71_15875 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D CLM71_17075 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CLM71_09120 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CLM71_05310 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CLM71_05595 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CLM71_12345 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CLM71_20390 PTS sucrose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLM71_17965 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CLM71_15265 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CLM71_02505 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CLM71_02260 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CLM71_15865 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CLM71_00165 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CLM71_18785 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_22175 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_15275 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CLM71_18770 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_22165 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_15290 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CLM71_18780 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_22170 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_15285 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CLM71_13610 PTS mannose transporter subunit IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CLM71_13615 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CLM71_13620 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CLM71_13365 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CLM71_13380 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CLM71_13375 PTS N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CLM71_13370 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D CLM71_16455 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLM71_12395 PTS fructose transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CLM71_16450 PTS mannitol transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLM71_12375 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CLM71_16445 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CLM71_12380 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CLM71_21125 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CLM71_20560 dihydroxyacetone kinase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CLM71_04635 aquaporin Z K06188 aqpZ; aquaporin Z D CLM71_23005 aquaporin K02440 glpF; glycerol uptake facilitator D CLM71_04990 ammonium transporter K03320 amt; ammonium transporter, Amt family D CLM71_21405 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_10835 glutathione transferase GstA K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_05030 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_17585 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_18975 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_07495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_20745 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CLM71_21005 stringent starvation protein A K03599 sspA; stringent starvation protein A D CLM71_08140 BAX inhibitor protein K19416 yccA; modulator of FtsH protease D CLM71_07820 formate transporter FocA K06212 focA; formate transporter D CLM71_22210 nitrite transporter NirC K02598 nirC; nitrite transporter D CLM71_21805 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D CLM71_11630 mechanosensitive ion channel protein K05802 mscK; potassium-dependent mechanosensitive channel D CLM71_01655 miniconductance mechanosensitive channel MscM K22051 mscM; miniconductance mechanosensitive channel D CLM71_19165 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D CLM71_04745 miniconductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel D CLM71_04535 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel D CLM71_17430 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D CLM71_14240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CLM71_14235 motility protein MotB K02557 motB; chemotaxis protein MotB D CLM71_20415 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D CLM71_20410 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D CLM71_05815 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D CLM71_05820 protein TolR K03560 tolR; biopolymer transport protein TolR D CLM71_00875 magnesium transporter CorA K03284 corA; magnesium transporter D CLM71_11100 zinc transporter ZntB K16074 zntB; zinc transporter D CLM71_05375 fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D CLM71_14525 ibestrophin K08994 yneE; ion channel-forming bestrophin family protein D CLM71_01860 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLM71_03910 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLM71_07955 porin OmpC K09476 ompF; outer membrane pore protein F D CLM71_01145 porin K09476 ompF; outer membrane pore protein F D CLM71_06635 porin OmpC K11929 phoE; outer membrane pore protein E D CLM71_16170 porin OmpC K09475 ompC; outer membrane pore protein C D CLM71_21600 lamB; maltoporin K02024 lamB; maltoporin D CLM71_17690 lactam utilization protein LamB K02024 lamB; maltoporin D CLM71_08070 porin OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family D CLM71_06900 ompX; outer membrane protein OmpX K11934 ompX; outer membrane protein X D CLM71_16740 long-chain fatty acid transporter FadL K06076 fadL; long-chain fatty acid transport protein D CLM71_09410 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D CLM71_06960 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19990 fimbrial protein FimD K07347 fimD; outer membrane usher protein D CLM71_07025 fimbrial protein K07347 fimD; outer membrane usher protein D CLM71_10350 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_18880 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19640 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_22700 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D CLM71_22705 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D CLM71_00135 autotransporter domain-containing esterase K12686 apeE; outer membrane lipase/esterase D CLM71_17000 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D CLM71_22870 btuB; vitamin B12/cobalamin outer membrane transporter K16092 btuB; vitamin B12 transporter D CLM71_15420 TonB-dependent siderophore receptor K15721 fyuA; pesticin/yersiniabactin receptor D CLM71_10265 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D CLM71_15815 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D CLM71_09925 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D CLM71_04660 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLM71_04280 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLM71_10235 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLM71_12905 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLM71_19340 ferrichrome porin FhuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLM71_08365 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CLM71_07360 peptidase K12538 hasF; outer membrane protein, type I secretion system D CLM71_20355 anibiotic ABC transporter K12340 tolC; outer membrane protein D CLM71_20555 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CLM71_11430 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CLM71_07265 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CLM71_18490 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CLM71_17785 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D CLM71_17320 outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D CLM71_04085 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D CLM71_18100 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D CLM71_01870 hypothetical protein K07278 tamA; translocation and assembly module TamA D CLM71_01875 translocation and assembly module TamB K09800 tamB; translocation and assembly module TamB D CLM71_21105 lipopolysaccharide ABC transporter substrate-binding protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D CLM71_21100 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D CLM71_03305 LPS assembly protein LptD K04744 lptD; LPS-assembly protein D CLM71_05440 LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D CLM71_00665 cellulose biosynthesis protein BcsC K20543 bcsC; cellulose synthase operon protein C D CLM71_05510 magnesium/cobalt transporter CorC K06189 corC; hemolysin (HlyC) family protein D CLM71_21380 murein hydrolase regulator LrgA K06518 cidA; holin-like protein D CLM71_07205 hypothetical protein K06518 cidA; holin-like protein D CLM71_15840 lysine transporter K11733 lysP; lysine-specific permease D CLM71_13680 aromatic amino acid transporter AroP K11734 aroP; aromatic amino acid transport protein AroP D CLM71_19565 aromatic amino acid transporter AroP K11734 aroP; aromatic amino acid transport protein AroP D CLM71_04735 proline-specific permease ProY K11736 proY; proline-specific permease ProY D CLM71_08440 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D CLM71_06135 L-asparagine permease K11738 ansP; L-asparagine permease D CLM71_03695 proY; proline-specific permease ProY K16234 hutT; histidine transporter D CLM71_17160 amino acid permease K16235 mmuP; S-methylmethionine transporter D CLM71_09400 Putrescine importer PuuP K14052 puuP; putrescine importer D CLM71_18435 cadB; lysine:cadaverine antiporter K03757 cadB; cadaverine:lysine antiporter D CLM71_11245 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CLM71_20605 L-methionine/branched-chain amino acid transporter K16263 yjeH; amino acid efflux transporter D CLM71_05890 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CLM71_23055 cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D CLM71_20590 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D CLM71_16650 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D CLM71_11425 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_05115 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_17275 aminoglycoside/multidrug transporter subunit AcrD K18324 acrD; multidrug efflux pump D CLM71_17460 multidrug transporter subunit MdtB K07788 mdtB; multidrug efflux pump D CLM71_17465 multidrug transporter subunit MdtC K07789 mdtC; multidrug efflux pump D CLM71_02345 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D CLM71_02350 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D CLM71_11135 multidrug DMT transporter K03297 emrE; small multidrug resistance pump D CLM71_01625 quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D CLM71_13020 multidrug/spermidine transporter subunit MdtI K11742 mdtI; spermidine export protein MdtI D CLM71_13025 multidrug/spermidine transporter subunit MdtJ K11743 mdtJ; spermidine export protein MdtJ D CLM71_06895 threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA D CLM71_00885 rarD; protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD D CLM71_10455 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_17680 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_19295 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_19300 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CLM71_09875 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D CLM71_12230 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D CLM71_21685 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D CLM71_22450 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D CLM71_02420 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CLM71_06910 GntP family transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CLM71_05185 gluconate:proton symporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CLM71_19485 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D CLM71_12465 kdgT; 2-keto-3-deoxygluconate transporter K02526 kdgT; 2-keto-3-deoxygluconate permease D CLM71_01575 C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D CLM71_04060 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CLM71_18960 lactate permease K03303 lutP; lactate permease D CLM71_06975 high-affinity choline transporter BetT K02168 betT; choline/glycine/proline betaine transport protein D CLM71_08410 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D CLM71_08380 sodium-potassium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter D CLM71_21085 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D CLM71_22620 anion permease K16322 pit; low-affinity inorganic phosphate transporter D CLM71_21340 sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter D CLM71_13930 sodium/proline symporter PutP K11928 putP; sodium/proline symporter D CLM71_01500 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter D CLM71_01515 glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein D CLM71_00680 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D CLM71_20800 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D CLM71_23350 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CLM71_03135 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D CLM71_12940 nhaB; sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family D CLM71_21390 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D CLM71_08910 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D CLM71_03210 glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC D CLM71_03205 glutathione-regulated potassium-efflux system oxidoreductase KefF K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF D CLM71_22035 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D CLM71_22040 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D CLM71_05205 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter D CLM71_08415 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein D CLM71_01280 Trk system potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein D CLM71_21800 Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D CLM71_06385 cytosine permease K23467 tgnP; trigonelline permease D CLM71_17365 uracil permease K02824 uraA; uracil permease D CLM71_08230 xanthine permease XanP K16345 xanP; xanthine permease XanP D CLM71_23355 xanthine permease XanP K16345 xanP; xanthine permease XanP D CLM71_21395 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CLM71_05060 permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CLM71_23690 adenine permease PurP K06901 pbuG; adenine/guanine/hypoxanthine permease D CLM71_19745 NupC/NupG family nucleoside CNT transporter K11535 nupC; nucleoside transport protein D CLM71_16890 NupC/NupG family nucleoside CNT transporter K11535 nupC; nucleoside transport protein D CLM71_16235 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein D CLM71_15900 tryptophan permease K03835 mtr; tryptophan-specific transport protein D CLM71_07525 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D CLM71_09755 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D CLM71_10875 hypothetical protein K05782 benE; benzoate membrane transport protein D CLM71_03575 H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family D CLM71_12275 voltage-gated ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family D CLM71_11315 chromate transporter K07240 chrA; chromate transporter D CLM71_11320 chromate transporter K07240 chrA; chromate transporter D CLM71_13315 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D CLM71_20045 C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D CLM71_16885 divalent metal cation transporter K03322 mntH; manganese transport protein D CLM71_21660 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D CLM71_14605 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D CLM71_07245 anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D CLM71_00750 lipid III flippase WzxE K16693 wzxE; enterobacterial common antigen flippase D CLM71_07330 colanic acid exporter K16695 wzxC; lipopolysaccharide exporter D CLM71_13165 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CLM71_19510 transporter K13936 mdcF; malonate transporter and related proteins D CLM71_17775 transporter K13936 mdcF; malonate transporter and related proteins D CLM71_23535 trkD; potassium transporter Kup K03549 kup; KUP system potassium uptake protein D CLM71_19160 arginine exporter ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D CLM71_00905 threonine export protein RhtC K05835 rhtC; threonine efflux protein D CLM71_06155 threonine transporter K05835 rhtC; threonine efflux protein D CLM71_03255 lysine transporter LysE K05835 rhtC; threonine efflux protein D CLM71_08420 amino acid transporter K05835 rhtC; threonine efflux protein D CLM71_04560 leucine efflux protein LeuE K11250 leuE; leucine efflux protein D CLM71_13440 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D CLM71_18260 hypothetical protein K26605 azlC; branched chain amino acid efflux pump D CLM71_13445 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D CLM71_18265 L-valine transporter subunit YgaH K26606 azlD; branched chain amino acid efflux pump D CLM71_16595 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein D CLM71_16590 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D CLM71_16585 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein D CLM71_21240 p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D CLM71_17340 AI-2E family transporter K03548 perM; putative permease D CLM71_19825 hypothetical protein K09125 yhhQ; queuosine precursor transporter D CLM71_00955 hypothetical protein K09125 yhhQ; queuosine precursor transporter D CLM71_03465 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CLM71_13630 hypothetical protein K23242 mntP; manganese efflux pump family protein D CLM71_17885 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D CLM71_02605 carbon starvation protein A K23676 btsT; pyruvate/proton symporter D CLM71_12650 TonB system transport protein TonB K03832 tonB; periplasmic protein TonB D CLM71_05835 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CLM71_05825 cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D CLM71_05830 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D CLM71_19535 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D CLM71_19525 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D CLM71_16620 protein-disulfide reductase K08344 scsB; suppressor for copper-sensitivity B D CLM71_13815 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20915 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CLM71_13810 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20920 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CLM71_13800 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CLM71_20930 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CLM71_15885 cytochrome C K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC D CLM71_15890 trimethylamine-N-oxide reductase TorA K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D CLM71_18755 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D CLM71_15795 efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D CLM71_18280 multidrug export protein EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D CLM71_07355 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D CLM71_16655 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D CLM71_20360 anibiotic ABC transporter K13408 cvaA; membrane fusion protein D CLM71_11420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_05120 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_05950 multidrug efflux pump-associated protein, AcrZ family K25859 acrZ; accessory protein, multidrug efflux pump D CLM71_17455 multidrug transporter subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D CLM71_18930 efflux transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D CLM71_07725 macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D CLM71_21245 p-hydroxybenzoic acid efflux pump subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D CLM71_07275 tyrosine-protein kinase Wzc K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLM71_13850 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CLM71_05885 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D CLM71_22345 iron transporter K04758 feoA; ferrous iron transport protein A D CLM71_22350 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CLM71_22355 ferrous iron transporter C K07490 feoC; ferrous iron transport protein C D CLM71_22625 universal stress protein UspB K06144 uspB; universal stress protein B D CLM71_01615 entericidin, EcnA/B family K16347 ecnA; entericidin A D CLM71_01620 entericidin, EcnA/B family K16348 ecnB; entericidin B D CLM71_16765 heme lyase NrfEFG subunit NrfE K02198 ccmF; cytochrome c-type biogenesis protein CcmF D CLM71_08240 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D CLM71_13505 copper resistance protein CopD K07245 pcoD; copper resistance protein D D CLM71_13510 hypothetical protein K07156 copC; copper resistance protein C D CLM71_12875 MltA-interacting protein MipA K07274 mipA; MipA family protein D CLM71_10300 MipA/OmpV family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:serm02044] D CLM71_20355 anibiotic ABC transporter K12340 tolC; outer membrane protein D CLM71_20555 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CLM71_07350 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D CLM71_07355 hemolysin D K12537 hasE; membrane fusion protein, type I secretion system D CLM71_07360 peptidase K12538 hasF; outer membrane protein, type I secretion system D CLM71_20360 anibiotic ABC transporter K13408 cvaA; membrane fusion protein D CLM71_08355 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-] D CLM71_17810 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D CLM71_19660 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CLM71_18695 prepilin-type cleavage/methylation domain-containing protein K02679 ppdA; prepilin peptidase dependent protein A D CLM71_18690 prepilin-type cleavage/methylation domain-containing protein K02680 ppdB; prepilin peptidase dependent protein B D CLM71_18680 potassium:proton antiporter K02681 ppdC; prepilin peptidase dependent protein C D CLM71_03555 prepilin peptidase-dependent pilin K02682 ppdD; prepilin peptidase dependent protein D D CLM71_03550 type II secretion system protein GspE K02504 hofB; protein transport protein HofB D CLM71_03545 type IV pilin biogenesis protein K02505 hofC; protein transport protein HofC D CLM71_22275 pilus assembly protein HofM K12288 hofM; pilus assembly protein HofM D CLM71_22270 pilus assembly protein PilN K12289 hofN; pilus assembly protein HofN D CLM71_22265 hypothetical protein K12290 hofO; pilus assembly protein HofO D CLM71_22260 hypothetical protein K12291 hofP; pilus assembly protein HofP D CLM71_22255 type IV pilus secretin PilQ K02507 hofQ; protein transport protein HofQ D CLM71_19675 hypothetical protein K02221 yggT; YggT family protein D CLM71_04940 competence protein ComEA K02237 comEA; competence protein ComEA D CLM71_07865 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D CLM71_20140 EscC/YscC/HrcC family type III secretion system outer membrane ring protein K03219 yscC; type III secretion protein C D CLM71_20200 type III secretion protein K03220 yscD; type III secretion protein D D CLM71_20120 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein K03222 yscJ; type III secretion protein J D CLM71_20130 HrpE/YscL family type III secretion apparatus protein K03223 yscL; type III secretion protein L D CLM71_20195 EscN/YscN/HrcN family type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CLM71_20180 aldolase K03225 yscQ; type III secretion protein Q D CLM71_20175 EscR/YscR/HrcR family type III secretion system export apparatus protein K03226 yscR; type III secretion protein R D CLM71_20170 EscS/YscS/HrcS family type III secretion system export apparatus protein K03227 yscS; type III secretion protein S D CLM71_20165 EscT/YscT/HrcT family type III secretion system export apparatus protein K03228 yscT; type III secretion protein T D CLM71_20160 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K03229 yscU; type III secretion protein U D CLM71_20205 EscV/YscV/HrcV family type III secretion system export apparatus protein K03230 yscV; type III secretion protein V D CLM71_20210 SepL/TyeA/HrpJ family type III secretion system gatekeeper K04058 yscW; type III secretion protein W D CLM71_14185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLM71_14190 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CLM71_14035 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CLM71_14045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CLM71_14050 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLM71_14075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLM71_14080 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D CLM71_14085 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLM71_14090 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLM71_14095 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CLM71_15460 type VI secretion protein K03194 virB1; type IV secretion system protein VirB1 D CLM71_15465 TriB protein K03197 virB2; type IV secretion system protein VirB2 D CLM71_15470 ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D CLM71_15475 type IV secretion system protein VirB5 K03200 virB5; type IV secretion system protein VirB5 D CLM71_15485 conjugal transfer protein TrbL K03201 virB6; type IV secretion system protein VirB6 D CLM71_15490 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D CLM71_15495 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9 D CLM71_15500 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10 D CLM71_15505 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D CLM71_19025 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CLM71_22700 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D CLM71_22705 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-] D CLM71_00135 autotransporter domain-containing esterase K12686 apeE; outer membrane lipase/esterase D CLM71_14290 icmF; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D CLM71_08165 hypothetical protein K11892 impK; type VI secretion system protein ImpK D CLM71_14285 type VI secretion system protein TssL K11892 impK; type VI secretion system protein ImpK D CLM71_08160 type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D CLM71_14280 type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D CLM71_08200 type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D CLM71_14390 type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D CLM71_08195 vasA; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D CLM71_14385 vasA; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D CLM71_14380 type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF D CLM71_08155 type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D CLM71_14310 type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D CLM71_08150 type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D CLM71_14305 type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D CLM71_14300 type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA D CLM71_08175 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_14325 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_13665 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_09745 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D CLM71_14405 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_20740 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_23300 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_00245 type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D CLM71_08215 type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein D CLM71_08205 type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D CLM71_14275 type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D CLM71_14395 clpV; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D CLM71_08360 type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D CLM71_08190 type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ D CLM71_08220 hypothetical protein K11911 vasL; type VI secretion system protein VasL D CLM71_14295 type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM D CLM71_14375 protein of avirulence locus ImpE K11898 impE; type VI secretion system protein ImpE D CLM71_06950 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_07015 ferrous iron transporter B K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_10360 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_18890 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_07035 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_19995 molecular chaperone K07346 fimC; fimbrial chaperone protein D CLM71_06960 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19990 fimbrial protein FimD K07347 fimD; outer membrane usher protein D CLM71_07025 fimbrial protein K07347 fimD; outer membrane usher protein D CLM71_10350 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_18880 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19640 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_18870 fimbrial protein K07349 fimG; minor fimbrial subunit D CLM71_20280 PapC/FimD family outer membrane usher protein K12518 papC; outer membrane usher protein PapC D CLM71_15230 PapC/FimD family outer membrane usher protein K12518 papC; outer membrane usher protein PapC D CLM71_00380 PapC/FimD family outer membrane usher protein K12518 papC; outer membrane usher protein PapC D CLM71_20285 fimbrial protein K12519 papD; chaperone protein PapD D CLM71_15225 molecular chaperone K12519 papD; chaperone protein PapD D CLM71_00385 molecular chaperone K12519 papD; chaperone protein PapD D CLM71_03515 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CLM71_23090 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D CLM71_04785 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CLM71_01365 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CLM71_04790 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CLM71_02015 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CLM71_03510 secA regulator SecM K13301 secM; secretion monitor D CLM71_21855 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CLM71_03920 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CLM71_01015 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CLM71_04780 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CLM71_23735 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CLM71_01215 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CLM71_01220 twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CLM71_01225 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CLM71_05380 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE C 02042 Bacterial toxins [BR:serm02042] D CLM71_01860 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLM71_03910 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CLM71_19055 hemolysin III family protein K11068 hlyIII; hemolysin III D CLM71_20370 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3] C 02022 Two-component system [BR:serm02022] D CLM71_04715 phoR; two-component system sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CLM71_04710 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CLM71_09265 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CLM71_09270 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CLM71_22325 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CLM71_22330 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CLM71_11225 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CLM71_11230 two-component system response regulator RstA K07661 rstA; two-component system, OmpR family, response regulator RstA D CLM71_23070 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CLM71_23065 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CLM71_17470 two-component system sensor histidine kinase BaeA K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CLM71_17475 two-component system response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR D CLM71_01970 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CLM71_01975 two-component system response regulator BasR K07771 basR; two-component system, OmpR family, response regulator BasR D CLM71_18980 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CLM71_18985 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CLM71_19385 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CLM71_19390 two-component system response regulator QseB K07666 qseB; two-component system, OmpR family, response regulator QseB D CLM71_05665 two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CLM71_05660 two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CLM71_20980 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CLM71_03065 two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D CLM71_16575 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D CLM71_16580 transcriptional regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD D CLM71_17080 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CLM71_10310 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CLM71_17085 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D CLM71_10305 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D CLM71_13875 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D CLM71_13880 two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D CLM71_17260 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D CLM71_17265 two-component system response regulator NarL K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D CLM71_16195 two-component system sensor histidine kinase RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D CLM71_16185 phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D CLM71_16190 transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D CLM71_18865 LuxR family transcriptional regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D CLM71_03650 two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CLM71_08515 two-component system response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CLM71_05895 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CLM71_19650 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CLM71_19655 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D CLM71_05900 DNA-binding response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ D CLM71_18220 histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D CLM71_15355 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB D CLM71_18225 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB D CLM71_13410 two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D CLM71_13415 two-component system response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D CLM71_22155 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CLM71_16830 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CLM71_22150 two-component system response regulator YehT K02477 K02477; two-component system, LytTR family, response regulator D CLM71_16835 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D CLM71_23400 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CLM71_23405 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CLM71_17935 two-component sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CLM71_17925 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CLM71_14230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLM71_14200 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLM71_14205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLM71_12770 two-component system response regulator RssB K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:serm02035] D CLM71_14230 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D CLM71_14225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CLM71_14210 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CLM71_14205 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CLM71_14200 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CLM71_14195 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CLM71_14220 methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CLM71_01895 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CLM71_00190 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CLM71_14215 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D CLM71_14045 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CLM71_14050 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CLM71_14055 fliJ; flagellar biosynthesis chaperone FliJ K02413 fliJ; flagellar protein FliJ D CLM71_14080 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D CLM71_14085 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CLM71_14090 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CLM71_14095 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CLM71_14185 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CLM71_14190 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CLM71_14180 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D CLM71_14040 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CLM71_14070 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CLM71_14075 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CLM71_14035 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CLM71_14115 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D CLM71_14155 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CLM71_14120 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D CLM71_14065 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CLM71_14030 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CLM71_14060 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D CLM71_14150 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CLM71_14145 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CLM71_14140 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CLM71_14130 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CLM71_14125 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CLM71_14110 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CLM71_14135 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CLM71_14105 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CLM71_14100 flgL; flagellar hook-filament junction protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D CLM71_14165 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D CLM71_13990 flagellin FliC K02406 fliC; flagellin D CLM71_13995 flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D CLM71_14000 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CLM71_14005 flagella biosynthesis regulatory protein FliT K02423 fliT; flagellar protein FliT D CLM71_14250 flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CLM71_14245 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CLM71_13985 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CLM71_14240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CLM71_14235 motility protein MotB K02557 motB; chemotaxis protein MotB D CLM71_13970 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CLM71_13980 flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D CLM71_14160 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CLM71_19660 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CLM71_17810 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D CLM71_06950 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_07015 ferrous iron transporter B K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_10360 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_18890 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_07035 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CLM71_19995 molecular chaperone K07346 fimC; fimbrial chaperone protein D CLM71_06960 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19990 fimbrial protein FimD K07347 fimD; outer membrane usher protein D CLM71_07025 fimbrial protein K07347 fimD; outer membrane usher protein D CLM71_10350 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_18880 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CLM71_19640 pilus assembly protein PapC K07347 fimD; outer membrane usher protein D CLM71_18870 fimbrial protein K07349 fimG; minor fimbrial subunit C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:serm04812] D CLM71_21295 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLM71_03495 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLM71_03490 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CLM71_12975 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CLM71_12980 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CLM71_12985 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D CLM71_06335 cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:serm04147] D CLM71_05170 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CLM71_03675 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CLM71_12865 aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_12010 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CLM71_19175 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CLM71_13045 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_10640 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CLM71_22160 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CLM71_11755 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLM71_16075 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLM71_04760 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CLM71_01595 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CLM71_03125 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CLM71_21640 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CLM71_17735 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CLM71_21975 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CLM71_01360 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CLM71_09155 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CLM71_12420 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CLM71_17035 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CLM71_03405 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_12995 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CLM71_06165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CLM71_05175 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CLM71_05150 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CLM71_22905 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CLM71_22910 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CLM71_07505 cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1] D CLM71_01900 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CLM71_05925 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CLM71_23010 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLM71_19880 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CLM71_23395 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CLM71_08875 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLM71_01235 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CLM71_19140 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CLM71_01475 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CLM71_19545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CLM71_05035 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CLM71_13035 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CLM71_23040 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CLM71_05910 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:serm02048] D CLM71_10080 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_14700 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_22235 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CLM71_08715 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D CLM71_15560 restriction endonuclease K07448 mrr; restriction system protein D CLM71_16225 Hok/Gef family protein K18920 hokA; protein HokA D CLM71_02925 phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CLM71_16805 hypothetical protein K18843 hicB; antitoxin HicB D CLM71_05075 hemolysin expression modulator Hha K05839 hha; haemolysin expression modulating protein D CLM71_15450 transcriptional regulator K05839 hha; haemolysin expression modulating protein D CLM71_05080 Biofilm formation regulator YbaJ K19162 tomB; hha toxicity modulator TomB D CLM71_11035 envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D CLM71_11030 envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D CLM71_10400 plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4 D CLM71_10405 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D CLM71_22320 VapC toxin family PIN domain ribonuclease K07062 fitB; toxin FitB [EC:3.1.-.-] D CLM71_22315 plasmid stabilization protein K21495 fitA; antitoxin FitA D CLM71_09015 bssS; transcriptional regulator K12148 bssS; biofilm regulator BssS D CLM71_06420 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA D CLM71_03495 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CLM71_21295 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CLM71_20505 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CLM71_20530 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CLM71_16905 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CLM71_19040 hypothetical protein K19168 cptA; toxin CptA D CLM71_19045 FAD assembly factor SdhE K09159 cptB; antitoxin CptB D CLM71_20245 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_17865 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CLM71_02490 dndB; DNA sulfur modification protein DndB K19169 dndB; DNA sulfur modification protein DndB D CLM71_02485 dndC; DNA phosphorothioation system sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC D CLM71_02480 dndD; DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD D CLM71_02475 dndE; DNA sulfur modification protein DndE K19172 dndE; DNA sulfur modification protein DndE D CLM71_02455 dptF; DNA phosphorothioation-dependent restriction protein DptF K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF D CLM71_02460 dptG; DNA phosphorothioation-dependent restriction protein DptG K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG D CLM71_02465 dptH; DNA phosphorothioation-dependent restriction protein DptH K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:serm04052] D CLM71_22050 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:serm01504] D CLM71_20005 aminoglycoside resistance protein K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] D CLM71_02525 APH(3') family aminoglycoside O-phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95] D CLM71_10865 3'-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D CLM71_19935 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D CLM71_12680 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CLM71_11695 fluoroquinolone resistance protein K18555 qnr; fluoroquinolone resistance protein D CLM71_18980 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CLM71_18985 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CLM71_09265 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CLM71_09270 two-component system response regulator PhoP K07660 phoP; two-component system, OmpR family, response regulator PhoP D CLM71_11420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_05120 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CLM71_11425 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_05115 hydrophobe/amphiphile efflux-1 family RND transporter K18138 acrB; multidrug efflux pump D CLM71_11430 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CLM71_21430 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D CLM71_05235 heavy metal-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D CLM71_20355 anibiotic ABC transporter K12340 tolC; outer membrane protein D CLM71_20555 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CLM71_19655 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D CLM71_06340 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_22540 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_10465 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_17670 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_17660 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_11090 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_15630 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_02890 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D CLM71_07955 porin OmpC K09476 ompF; outer membrane pore protein F D CLM71_01145 porin K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:serm00536] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:serm00537] D CLM71_11755 peptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CLM71_16075 peptidase M19 K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:serm03100] D CLM71_16900 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_16895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_01305 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_18335 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_22845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CLM71_03875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_05325 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_00775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_16800 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_03880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_03885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CLM71_15065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_15090 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_15360 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_15720 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CLM71_04135 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLM71_04255 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLM71_22830 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CLM71_08535 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CLM71_05535 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLM71_05545 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLM71_05550 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CLM71_01485 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_04120 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_21745 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_23485 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CLM71_19005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01675 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01350 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_01685 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_08530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CLM71_00780 tRNA-His K14226 tRNA-His; tRNA His D CLM71_01300 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLM71_18340 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLM71_22850 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CLM71_05555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_08540 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02435 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_00785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_02885 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CLM71_05845 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_05855 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_05865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_16925 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CLM71_05560 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_02025 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_05540 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_18635 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_18640 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_18645 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_20680 tRNA-Met K14230 tRNA-Met; tRNA Met D CLM71_01555 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLM71_19750 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CLM71_15995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLM71_00585 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLM71_00790 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CLM71_03870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_13225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_08145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_16145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_13240 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CLM71_01355 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_21730 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_04455 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_01340 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_16020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CLM71_22825 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CLM71_01345 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLM71_12790 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLM71_12795 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CLM71_10660 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_05850 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_16910 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_16915 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_16920 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_10665 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_10670 tRNA-Val K14237 tRNA-Val; tRNA Val D CLM71_00420 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CLM71_01295 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_21750 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_23490 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_18345 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CLM71_04125 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_22840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01490 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_18330 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_23480 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_21740 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CLM71_01315 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CLM71_05020 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CLM71_20935 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CLM71_18120 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CLM71_20460 2,5-didehydrogluconate reductase DkgA K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CLM71_19475 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D CLM71_02425 hypothetical protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410] D CLM71_06930 oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D CLM71_15725 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CLM71_16875 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CLM71_17200 erythritol/L-threitol dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D CLM71_09490 gluconate 5-dehydrogenase K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D CLM71_07490 oxidoreductase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D CLM71_02720 anaerobic sulfatase maturase K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7] D CLM71_06380 carnitine dehydratase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-] D CLM71_20770 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D CLM71_14265 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D CLM71_11740 pyrroloquinoline quinone biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D CLM71_13335 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D CLM71_13330 isoquinoline 1-oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D CLM71_11940 3-hydroxyisobutyrate dehydrogenase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D CLM71_15185 D-amino-acid oxidase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25] D CLM71_09010 N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D CLM71_21545 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CLM71_20510 NADPH quinone reductase MdaB K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D CLM71_11170 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D CLM71_05000 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D CLM71_20020 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D CLM71_01865 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CLM71_12860 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CLM71_07050 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D CLM71_16475 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D CLM71_13230 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D CLM71_20870 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D CLM71_21310 protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D CLM71_12270 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D CLM71_12000 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D CLM71_12025 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D CLM71_17335 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CLM71_11060 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CLM71_00575 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D CLM71_14535 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D CLM71_17115 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D CLM71_22465 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CLM71_04605 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CLM71_15115 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91] D CLM71_17910 NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CLM71_06375 LLM class flavin-dependent oxidoreductase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-] D CLM71_13515 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D CLM71_19435 multicopper oxidase CueO K14588 cueO; cuproxidase [EC:1.16.3.4] D CLM71_23025 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CLM71_14600 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CLM71_17350 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CLM71_11730 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D CLM71_02245 anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D CLM71_07810 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CLM71_02370 cutD; choline TMA-lyase-activating enzyme K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-] D CLM71_07695 NADH oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D CLM71_03815 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CLM71_10690 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CLM71_05250 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CLM71_04565 tellurite resistance methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D CLM71_08920 glucans biosynthesis protein MdoC K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D CLM71_19500 mdcH; malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D CLM71_21470 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CLM71_06125 acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D CLM71_05505 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CLM71_11685 GNAT family N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D CLM71_02130 GNAT family N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D CLM71_06430 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D CLM71_02315 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D CLM71_06415 MarR family transcriptional regulator K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D CLM71_04465 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D CLM71_07755 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D CLM71_19530 triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D CLM71_18300 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D CLM71_18710 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CLM71_04405 FAD:protein FMN transferase ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CLM71_16635 FAD:protein FMN transferase ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CLM71_06925 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D CLM71_19480 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D CLM71_10550 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CLM71_20615 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CLM71_15595 reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D CLM71_19505 phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D CLM71_09900 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D CLM71_21700 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D CLM71_10240 enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D CLM71_16995 enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D CLM71_18150 esterase K23722 pfeE; iron(III)-enterobactin esterase [EC:3.1.1.108] D CLM71_04180 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CLM71_20080 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CLM71_05810 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CLM71_12585 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CLM71_16720 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D CLM71_15945 phage resistance protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CLM71_17420 sensor domain-containing phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CLM71_00670 biofilm formation regulator HmsP K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CLM71_19615 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D CLM71_02955 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CLM71_09115 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CLM71_01230 3'-5' ssDNA/RNA exonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CLM71_05635 alpha/beta hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D CLM71_04435 esterase FrsA K11750 frsA; esterase FrsA [EC:3.1.-.-] D CLM71_00660 cellulase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D CLM71_04035 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CLM71_08675 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CLM71_10095 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CLM71_15740 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CLM71_15660 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D CLM71_21785 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CLM71_13550 ASCH domain-containing protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D CLM71_06365 alpha/beta hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-] D CLM71_02280 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CLM71_15050 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CLM71_10860 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CLM71_20620 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25] D CLM71_04960 HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-] D CLM71_11670 nucleoside triphosphatase NudI K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-] D CLM71_17220 GDP-mannose pyrophosphatase NudK K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D CLM71_09050 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D CLM71_23540 ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CLM71_19520 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D CLM71_19515 mdcE; biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D CLM71_06920 aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D CLM71_12470 fsa; fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-] D CLM71_17600 mandelate racemase K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81] D CLM71_01695 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CLM71_06785 fructotransferase K25596 E4.2.1.178; difructose-dianhydride-III synthase [EC:4.2.1.178] D CLM71_02375 cutC; choline trimethylamine-lyase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4] D CLM71_18615 cysteine desulfurase CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D CLM71_11195 RbsD/FucU transporter K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D CLM71_02855 L-fucose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D CLM71_17525 arabinose-5-phosphate isomerase GutQ K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D CLM71_06915 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D CLM71_01905 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D CLM71_10910 electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D CLM71_10920 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D CLM71_10925 electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D CLM71_04375 NADH:ubiquinone reductase (Na(+)-transporting) subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CLM71_04380 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CLM71_04385 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CLM71_04390 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D CLM71_04395 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CLM71_04400 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D CLM71_00980 zntA; zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D CLM71_14630 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D CLM71_19360 DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D CLM71_22480 protein iolH K06605 iolH; myo-inositol catabolism protein IolH C 99982 Energy metabolism D CLM71_14520 sulfurtransferase FdhD K02379 fdhD; FdhD protein D CLM71_16220 2Fe-2S ferredoxin K11107 yfaE; ferredoxin D CLM71_10905 electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CLM71_10900 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D CLM71_10930 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D CLM71_23560 FMN-binding protein MioC K06205 mioC; MioC protein D CLM71_19035 flavodoxin FldB K03840 fldB; flavodoxin II D CLM71_17860 Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D CLM71_21215 cytochrome B562 K15536 cybC; soluble cytochrome b562 D CLM71_17250 nitrate reductase K02570 napD; periplasmic nitrate reductase NapD D CLM71_17255 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D CLM71_05625 flavodoxin FldA K03839 fldA; flavodoxin I D CLM71_17225 cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC D CLM71_17240 ferredoxin-type protein NapG K02573 napG; ferredoxin-type protein NapG D CLM71_17235 quinol dehydrogenase ferredoxin subunit NapH K02574 napH; ferredoxin-type protein NapH C 99983 Lipid metabolism D CLM71_01765 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D CLM71_18200 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CLM71_17055 sulfate transporter CysZ K06203 cysZ; CysZ protein D CLM71_18445 VOC family protein K08234 yaeR; glyoxylase I family protein D CLM71_11070 murein peptide amidase A K14054 mpaA; murein peptide amidase A D CLM71_19665 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CLM71_12510 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D CLM71_12505 lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D CLM71_00800 protoheme IX biogenesis protein HemY K02498 hemY; HemY protein D CLM71_13195 ABC transporter K03688 ubiB; ubiquinone biosynthesis protein D CLM71_01210 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D CLM71_01205 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D CLM71_20600 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D CLM71_02125 SCP2 domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D CLM71_23470 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D CLM71_20495 cell division protein FtsP K04753 sufI; suppressor of ftsI D CLM71_23700 hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D CLM71_15070 FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D CLM71_19915 TQO small subunit DoxD family protein K15977 K15977; putative oxidoreductase D CLM71_20865 hypothetical protein K15977 K15977; putative oxidoreductase D CLM71_18160 hypothetical protein K15977 K15977; putative oxidoreductase D CLM71_18305 protein acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CLM71_21230 hypothetical protein K03623 yhcO; ribonuclease inhibitor D CLM71_07885 cold-shock protein K03704 cspA; cold shock protein D CLM71_07890 cold-shock protein K03704 cspA; cold shock protein D CLM71_05360 cold-shock protein K03704 cspA; cold shock protein D CLM71_13565 cold-shock protein K03704 cspA; cold shock protein D CLM71_13645 cold-shock protein K03704 cspA; cold shock protein D CLM71_14890 cold-shock protein K03704 cspA; cold shock protein D CLM71_07735 cspD; cold shock domain protein CspD K03704 cspA; cold shock protein D CLM71_01435 sigma D regulator K07740 rsd; regulator of sigma D D CLM71_04985 nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2 D CLM71_22340 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CLM71_11145 heat-inducible protein K03668 hslJ; heat shock protein HslJ D CLM71_07740 ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CLM71_04910 trigger factor K03545 tig; trigger factor D CLM71_21315 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D CLM71_00220 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D CLM71_18115 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D CLM71_18195 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH D CLM71_22810 ATP-dependent protease K07391 comM; magnesium chelatase family protein D CLM71_18820 protein-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase D CLM71_22115 hypothetical protein K07397 yhfA; putative redox protein D CLM71_22380 iron-sulfur cluster biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D CLM71_12195 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor D CLM71_19595 XshC-Cox1 family protein K07402 xdhC; xanthine dehydrogenase accessory factor D CLM71_06640 glutathione S-transferase K11208 yncG; GST-like protein C 99976 Replication and repair D CLM71_05015 methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D CLM71_18590 flap endonuclease Xni K01146 xni; protein Xni D CLM71_23220 hypothetical protein K03630 radC; DNA repair protein RadC D CLM71_01195 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D CLM71_07710 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CLM71_20950 YraN family protein K07460 yraN; putative endonuclease D CLM71_02135 hypothetical protein K07461 K07461; putative endonuclease D CLM71_21780 DNA-protecting protein DprA K04096 smf; DNA processing protein D CLM71_18840 integrase K07357 fimB; type 1 fimbriae regulatory protein FimB D CLM71_18895 DNA recombinase K07357 fimB; type 1 fimbriae regulatory protein FimB D CLM71_08720 terminase K07474 xtmA; phage terminase small subunit D CLM71_07790 recombination factor protein RarA K07478 ycaJ; putative ATPase D CLM71_21770 hypothetical protein K07479 yrdD; putative DNA topoisomerase D CLM71_10285 IS30 family transposase K07482 K07482; transposase, IS30 family D CLM71_10370 hypothetical protein K07483 K07483; transposase D CLM71_14725 IS3 family transposase K07497 K07497; putative transposase D CLM71_20675 IS3 family transposase K07497 K07497; putative transposase D CLM71_10340 IS6 family transposase K07498 K07498; putative transposase D CLM71_10365 IS6 family transposase K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D CLM71_11025 phage shock protein PspA K03969 pspA; phage shock protein A D CLM71_11040 phage shock protein D K03971 pspD; phage shock protein D D CLM71_05160 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CLM71_16795 hypothetical protein K21990 yfdC; formate-nitrite transporter family protein D CLM71_06780 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CLM71_17700 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CLM71_19580 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CLM71_05050 amino acid transporter K03293 TC.AAT; amino acid transporter, AAT family D CLM71_00770 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D CLM71_15040 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D CLM71_16095 BCCT transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D CLM71_18425 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CLM71_08960 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CLM71_13220 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CLM71_10890 dipeptide/tripeptide permease DtpA K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CLM71_07470 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLM71_15670 sodium:proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D CLM71_03100 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CLM71_19465 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CLM71_00460 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CLM71_04730 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CLM71_21655 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CLM71_08255 nitrate reductase K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D CLM71_20485 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D CLM71_02960 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D CLM71_03375 C4-dicarboxylate ABC transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D CLM71_07590 transporter K07085 K07085; putative transport protein C 99978 Cell growth D CLM71_12640 septation protein A K06190 ispZ; intracellular septation protein D CLM71_00945 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D CLM71_12930 SpoVR family protein K06415 spoVR; stage V sporulation protein R D CLM71_23110 murein hydrolase activator EnvC K22719 envC; murein hydrolase activator C 99993 Cell motility D CLM71_09165 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D CLM71_08080 DNA transformation protein tfoX K07343 tfoX; DNA transformation protein and related proteins D CLM71_10355 fimbrial chaperone K15540 ecpD; chaperone protein EcpD D CLM71_07020 molecular chaperone K15540 ecpD; chaperone protein EcpD D CLM71_18575 SecY-interacting protein K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D CLM71_03565 regulatory signaling modulator protein AmpE K03807 ampE; AmpE protein D CLM71_00490 tellurium resistance protein TerA K05792 terA; tellurite resistance protein TerA D CLM71_00505 chemical-damaging agent resistance protein C K05795 terD; tellurium resistance protein TerD D CLM71_00510 chemical-damaging agent resistance protein C K05795 terD; tellurium resistance protein TerD D CLM71_00485 tellurium resistance protein TerZ K05791 terZ; tellurium resistance protein TerZ D CLM71_09595 RNA chaperone ProQ K03607 proQ; ProP effector D CLM71_09365 universal stress protein UspA K06149 uspA; universal stress protein A D CLM71_14485 universal stress protein UspA K06149 uspA; universal stress protein A D CLM71_14490 universal stress protein UspA K06149 uspA; universal stress protein A D CLM71_22630 universal stress protein UspA K06149 uspA; universal stress protein A D CLM71_14260 universal stress protein UspC K14064 uspC; universal stress protein C D CLM71_11275 universal stress protein UspE K14055 uspE; universal stress protein E D CLM71_08450 universal stress protein K11932 uspG; universal stress protein G D CLM71_10940 carbon starvation protein A K06200 cstA; carbon starvation protein D CLM71_23385 translational GTPase TypA K06207 typA; GTP-binding protein D CLM71_13140 HPP family protein K07168 K07168; CBS domain-containing membrane protein D CLM71_14360 type VI secretion system-associated FHA domain protein TagH K07169 K07169; FHA domain-containing protein D CLM71_05520 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CLM71_08370 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CLM71_12885 PrkA family serine protein kinase K07180 prkA; serine protein kinase D CLM71_16100 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein D CLM71_20625 hypothetical protein K07184 ygiM; SH3 domain protein D CLM71_02985 hypothetical protein K07186 smp; membrane protein D CLM71_04860 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D CLM71_07785 lolA; outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D CLM71_13290 lipoprotein localization factor LolB K02494 lolB; outer membrane lipoprotein LolB D CLM71_16745 phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA D CLM71_00725 ECA polysaccharide chain length modulation protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D CLM71_10805 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB D CLM71_18485 molecular chaperone Skp K06142 hlpA; outer membrane protein D CLM71_03820 murein hydrolase activator NlpD K06194 nlpD; lipoprotein NlpD D CLM71_18970 endopeptidase K12943 ygeR; lipoprotein YgeR D CLM71_02065 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D CLM71_12625 outer membrane protein OmpW K07275 ompW; outer membrane protein D CLM71_13000 hypothetical protein K07285 slp; outer membrane lipoprotein D CLM71_04900 hypothetical protein K07286 yajG; uncharacterized lipoprotein D CLM71_07240 outer membrane assembly protein AsmA K07289 asmA; AsmA protein D CLM71_22740 AsmA family protein K07290 yhjG; AsmA family protein D CLM71_05240 hypothetical protein K07340 ybbJ; inner membrane protein D CLM71_02100 secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein D CLM71_01540 secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein D CLM71_09000 tqsA; pheromone autoinducer 2 transporter K11744 tqsA; AI-2 transport protein TqsA D CLM71_11405 osmotically-inducible lipoprotein B K04062 osmB; osmotically inducible lipoprotein OsmB D CLM71_12485 osmotically-inducible lipoprotein OsmB K04062 osmB; osmotically inducible lipoprotein OsmB D CLM71_16150 transcriptional regulator K04064 osmE; osmotically inducible lipoprotein OsmE D CLM71_16770 cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D CLM71_16755 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D CLM71_17805 cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ D CLM71_21250 protein AaeX K21695 aaeX; protein AaeX D CLM71_20350 acid-resistance protein K21908 hdeD; membrane protein HdeD C 99994 Others D CLM71_23660 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D CLM71_21970 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D CLM71_08925 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D CLM71_00495 Tellurium resistance protein TerB K05793 terB; tellurite resistance protein TerB D CLM71_00500 tellurium resistance protein TerC K05794 terC; tellurite resistance protein TerC D CLM71_01570 divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D CLM71_13145 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D CLM71_02210 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D CLM71_03285 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D CLM71_00830 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D CLM71_09920 hemin-degrading factor K07225 hmuS; putative hemin transport protein D CLM71_05130 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D CLM71_16520 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D CLM71_08035 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B D CLM71_13170 virulence factor MviM K03810 mviM; virulence factor D CLM71_18315 hypothetical protein K05811 yfiM; putative lipoprotein D CLM71_15020 paaY; phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein D CLM71_02935 molecular chaperone OsmY K04065 osmY; hyperosmotically inducible periplasmic protein D CLM71_13210 phosphatase K04477 ycdX; putative hydrolase D CLM71_11750 pqqA; pyrroloquinoline quinone precursor peptide PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D CLM71_11745 pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D CLM71_11735 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D CLM71_18075 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D CLM71_12775 patatin family protein K07001 K07001; NTE family protein D CLM71_03580 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D CLM71_10600 Fe-S cluster assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA D CLM71_10605 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CLM71_10615 FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D CLM71_09660 metal-dependent hydrolase K07038 K07038; inner membrane protein D CLM71_22725 yhjD; inner membrane protein YhjD K07058 K07058; membrane protein D CLM71_23375 hypothetical protein K07058 K07058; membrane protein D CLM71_01585 membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA D CLM71_18620 csdE; cysteine desulfurase sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE D CLM71_10625 cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D CLM71_08985 hypothetical protein K07146 K07146; UPF0176 protein D CLM71_09280 lysogenization regulator HflD K07153 hflD; high frequency lysogenization protein D CLM71_14940 VOC family protein K04750 phnB; PhnB protein D CLM71_09495 GlcG protein K11477 glcG; glc operon protein GlcG D CLM71_08950 secY/secA suppressor protein K12147 msyB; acidic protein MsyB D CLM71_03625 glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein D CLM71_22020 lysis protein K03745 slyX; SlyX protein D CLM71_21775 DUF494 domain-containing protein K03747 smg; Smg protein D CLM71_03060 hypothetical protein K05805 creA; CreA protein D CLM71_19610 SprT family protein K02742 sprT; SprT protein D CLM71_16525 cell division protein DedD K03749 dedD; DedD protein D CLM71_22240 SPOR domain-containing protein K03112 damX; DamX protein D CLM71_07185 vancomycin high temperature exclusion protein K03748 sanA; SanA protein D CLM71_16545 hypothetical protein K03975 dedA; membrane-associated protein D CLM71_08030 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D CLM71_09585 hypothetical protein K03808 pqiA; paraquat-inducible protein A D CLM71_16280 protein ElaB K05594 elaB; ElaB protein D CLM71_01770 hypothetical protein K08989 K08989; putative membrane protein D CLM71_11050 TIGR01620 family protein K08990 ycjF; putative membrane protein D CLM71_01005 hypothetical protein K08993 yhhL; putative membrane protein D CLM71_12780 hypothetical protein K09858 K09858; SEC-C motif domain protein D CLM71_05010 glycoprotein-polysaccharide metabolism protein K09914 K09914; putative lipoprotein D CLM71_21595 maltose operon protein MalM K05775 malM; maltose operon periplasmic protein D CLM71_21625 phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE D CLM71_20060 hypothetical protein K06193 phnA; protein PhnA C 99997 Function unknown D CLM71_18065 protein PhlB K06867 K06867; uncharacterized protein D CLM71_07580 Inversin K06867 K06867; uncharacterized protein D CLM71_03220 ankryin K06867 K06867; uncharacterized protein D CLM71_03225 ankryin K06867 K06867; uncharacterized protein D CLM71_03230 ankryin K06867 K06867; uncharacterized protein D CLM71_03240 ankryin K06867 K06867; uncharacterized protein D CLM71_03245 ankryin K06867 K06867; uncharacterized protein D CLM71_03250 ankryin K06867 K06867; uncharacterized protein D CLM71_13490 HNH endonuclease K06887 K06887; uncharacterized protein D CLM71_21440 HNH endonuclease K06887 K06887; uncharacterized protein D CLM71_01790 esterase K06889 K06889; uncharacterized protein D CLM71_06075 BAX inhibitor (BI)-1/YccA family protein K06890 K06890; uncharacterized protein D CLM71_04010 baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D CLM71_10160 baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D CLM71_03970 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D CLM71_10215 late control protein D K06905 D; Bacteriophage probable baseplate hub protein D CLM71_03975 phage tail protein K06906 gpU; phage tail protein D CLM71_10205 phage tail protein K06906 gpU; phage tail protein D CLM71_04000 phage tail protein K06907 FI; Bacteriophage tail sheath protein D CLM71_10185 phage tail protein K06907 FI; Bacteriophage tail sheath protein D CLM71_03995 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D CLM71_10190 phage tail protein K06908 FII; Bacteriophage tail tube protein D CLM71_11045 hypothetical protein K06918 K06918; uncharacterized protein D CLM71_08110 hypothetical protein K06929 K06929; uncharacterized protein D CLM71_10765 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D CLM71_15895 hypothetical protein K06940 K06940; uncharacterized protein D CLM71_12630 zinc/iron-chelating domain-containing protein K06940 K06940; uncharacterized protein D CLM71_09655 L-cystine transporter K06956 K06956; uncharacterized protein D CLM71_02690 cytoplasmic protein K06995 K06995; uncharacterized protein D CLM71_09180 hypothetical protein K07000 K07000; uncharacterized protein D CLM71_20535 esterase YqiA K07000 K07000; uncharacterized protein D CLM71_15990 hypothetical protein K07014 K07014; uncharacterized protein D CLM71_22095 hydrolase K07019 K07019; uncharacterized protein D CLM71_11265 glyoxalase K07032 K07032; uncharacterized protein D CLM71_21400 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K07032 K07032; uncharacterized protein D CLM71_17310 hypothetical protein K07054 K07054; uncharacterized protein D CLM71_22030 hypothetical protein K07070 K07070; uncharacterized protein D CLM71_16485 TIGR01777 family protein K07071 K07071; uncharacterized protein D CLM71_07160 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein D CLM71_02240 hypothetical protein K07089 K07089; uncharacterized protein D CLM71_19760 hypothetical protein K07090 K07090; uncharacterized protein D CLM71_21205 hypothetical protein K07090 K07090; uncharacterized protein D CLM71_17570 hypothetical protein K07090 K07090; uncharacterized protein D CLM71_16695 hypothetical protein K07090 K07090; uncharacterized protein D CLM71_13950 permease K07090 K07090; uncharacterized protein D CLM71_03275 transcriptional initiation protein Tat K07093 K07093; uncharacterized protein D CLM71_16470 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein D CLM71_01850 YtfJ family protein K07109 K07109; uncharacterized protein D CLM71_02075 hypothetical protein K07112 K07112; uncharacterized protein D CLM71_10755 3-beta hydroxysteroid dehydrogenase K07118 K07118; uncharacterized protein D CLM71_00880 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D CLM71_20945 penicillin-binding protein activator K07121 K07121; uncharacterized protein D CLM71_11910 SDR family oxidoreductase K07124 K07124; uncharacterized protein D CLM71_13125 hypothetical protein K07136 K07136; uncharacterized protein D CLM71_20985 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D CLM71_08015 hypothetical protein K07140 K07140; MOSC domain-containing protein D CLM71_07180 hypothetical protein K07148 K07148; uncharacterized protein D CLM71_23740 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D CLM71_19680 YggU family protein K09131 K09131; uncharacterized protein D CLM71_05395 hypothetical protein K09158 K09158; uncharacterized protein D CLM71_12955 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D CLM71_16410 hypothetical protein K09161 K09161; uncharacterized protein D CLM71_04590 hypothetical protein K09712 K09712; uncharacterized protein D CLM71_17150 DUF188 domain-containing protein K09768 K09768; uncharacterized protein D CLM71_12670 hypothetical protein K09780 K09780; uncharacterized protein D CLM71_06175 hypothetical protein K09781 K09781; uncharacterized protein D CLM71_12890 hypothetical protein K09786 K09786; uncharacterized protein D CLM71_05145 hypothetical protein K09790 K09790; uncharacterized protein D CLM71_07900 hypothetical protein K09791 K09791; uncharacterized protein D CLM71_23115 hypothetical protein K09798 K09798; uncharacterized protein D CLM71_18105 RnfH family protein K09801 K09801; uncharacterized protein D CLM71_15730 hypothetical protein K09802 K09802; uncharacterized protein D CLM71_19155 oxidative stress defense protein K09807 K09807; uncharacterized protein D CLM71_07715 hypothetical protein K09824 virK; uncharacterized protein D CLM71_04410 hypothetical protein K05952 K05952; uncharacterized protein D CLM71_08040 hypothetical protein K09857 K09857; uncharacterized protein D CLM71_03095 peroxide stress protein YaaA K09861 K09861; uncharacterized protein D CLM71_03525 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D CLM71_01455 hypothetical protein K09891 K09891; uncharacterized protein D CLM71_23420 Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein D CLM71_19120 YecA family protein K09895 K09895; uncharacterized protein D CLM71_23460 hypothetical protein K09896 K09896; uncharacterized protein D CLM71_22815 hypothetical protein K09897 K09897; uncharacterized protein D CLM71_22100 hypothetical protein K09898 K09898; uncharacterized protein D CLM71_16415 hypothetical protein K09899 K09899; uncharacterized protein D CLM71_12695 dsDNA-mimic protein K09901 K09901; uncharacterized protein D CLM71_12970 hypothetical protein K09902 K09902; uncharacterized protein D CLM71_15985 hypothetical protein K09904 K09904; uncharacterized protein D CLM71_13155 VOC family protein K09907 K09907; uncharacterized protein D CLM71_21025 cytochrome D ubiquinol oxidase subunit III K09908 K09908; uncharacterized protein D CLM71_08105 hypothetical protein K09909 K09909; uncharacterized protein D CLM71_19490 hypothetical protein K09910 K09910; uncharacterized protein D CLM71_08065 macrodomain Ter protein MatP K09911 K09911; uncharacterized protein D CLM71_06675 nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein D CLM71_13175 DUF480 domain-containing protein K09915 K09915; uncharacterized protein D CLM71_12855 DUF1315 domain-containing protein K09916 K09916; uncharacterized protein D CLM71_13575 YoaH family protein K09917 K09917; uncharacterized protein D CLM71_13555 hypothetical protein K09918 K09918; uncharacterized protein D CLM71_20545 hypothetical protein K09920 K09920; uncharacterized protein D CLM71_00845 DUF484 family protein K09921 K09921; uncharacterized protein D CLM71_19705 hypothetical protein K09923 K09923; uncharacterized protein D CLM71_07895 hypothetical protein K09927 K09927; uncharacterized protein D CLM71_19905 hypothetical protein K09930 K09930; uncharacterized protein D CLM71_01740 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D CLM71_04620 ABC transporter substrate-binding protein K09945 K09945; uncharacterized protein D CLM71_17480 hypothetical protein K09946 K09946; uncharacterized protein D CLM71_17040 cytoplasmic protein K09954 K09954; uncharacterized protein D CLM71_20895 hypothetical protein K09958 K09958; uncharacterized protein D CLM71_17020 nitrate reductase K09962 K09962; uncharacterized protein D CLM71_05225 conjugal transfer protein TraB K09973 K09973; uncharacterized protein D CLM71_09455 HutD family protein K09975 K09975; uncharacterized protein D CLM71_11165 hypothetical protein K09978 K09978; uncharacterized protein D CLM71_02180 hypothetical protein K09979 K09979; uncharacterized protein D CLM71_11690 hypothetical protein K09982 K09982; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024