+E Transcription factors KO #

  Transcription Factors - Salmonella enterica subsp. arizonae

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D SARI_03133 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D SARI_00944 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D SARI_02901 hypothetical protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D SARI_01892 hypothetical protein K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D SARI_03597 hypothetical protein K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D SARI_03598 hypothetical protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D SARI_01663 hypothetical protein K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon D SARI_02172 hypothetical protein K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon D SARI_03362 hypothetical protein K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA D SARI_00430 hypothetical protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D SARI_03412 hypothetical protein K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D SARI_01456 hypothetical protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D SARI_02997 hypothetical protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D SARI_02356 hypothetical protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D SARI_02376 hypothetical protein K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon D SARI_03360 hypothetical protein K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D SARI_01700 hypothetical protein K25495 nimR; AraC family transcriptional regulator, regulator of nimT D SARI_00851 hypothetical protein K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator D SARI_00624 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D SARI_04680 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D SARI_03746 hypothetical protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D SARI_03693 hypothetical protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D SARI_02951 hypothetical protein K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D SARI_03539 hypothetical protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D SARI_04586 hypothetical protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D SARI_02888 hypothetical protein K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D SARI_04374 hypothetical protein K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator D SARI_01247 hypothetical protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D SARI_04165 hypothetical protein K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D SARI_01478 hypothetical protein K19555 spvR; LysR family transcriptional regulator, spv operon transcriptional activator D SARI_03064 hypothetical protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D SARI_04266 hypothetical protein K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D SARI_03754 hypothetical protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator C DeoR family D SARI_02066 hypothetical protein K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D SARI_03855 hypothetical protein K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D SARI_04098 hypothetical protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D SARI_04365 hypothetical protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D SARI_01157 hypothetical protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D SARI_04683 hypothetical protein K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D SARI_00134 hypothetical protein K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D SARI_03253 hypothetical protein K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor D SARI_03641 hypothetical protein K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor C LacI family D SARI_02833 hypothetical protein K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D SARI_03974 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SARI_01416 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SARI_04646 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SARI_00701 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SARI_03763 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SARI_03562 hypothetical protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D SARI_02884 hypothetical protein K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D SARI_03195 hypothetical protein K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D SARI_01552 hypothetical protein K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D SARI_03945 hypothetical protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D SARI_04086 hypothetical protein K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D SARI_03161 hypothetical protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator D SARI_01513 hypothetical protein K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein C GntR family D SARI_02137 hypothetical protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D SARI_04034 hypothetical protein K03710 K03710; GntR family transcriptional regulator D SARI_01134 hypothetical protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D SARI_02843 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D SARI_03069 hypothetical protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D SARI_03949 hypothetical protein K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D SARI_04284 hypothetical protein K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D SARI_01390 hypothetical protein K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator D SARI_00179 hypothetical protein K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D SARI_01447 hypothetical protein K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor C TetR/AcrR family D SARI_02457 hypothetical protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D SARI_03909 hypothetical protein K05501 slmA; TetR/AcrR family transcriptional regulator D SARI_01880 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator D SARI_01544 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D SARI_04240 hypothetical protein K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor D SARI_01778 hypothetical protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D SARI_03536 hypothetical protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D SARI_02108 hypothetical protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity C Lrp/AsnC family D SARI_03774 hypothetical protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D SARI_02005 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D SARI_02476 hypothetical protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator C LuxR family D SARI_00987 hypothetical protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D SARI_00955 hypothetical protein K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D SARI_03031 hypothetical protein K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D SARI_04099 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D SARI_01457 hypothetical protein K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D SARI_01538 hypothetical protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D SARI_00160 hypothetical protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D SARI_00037 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility C MerR family D SARI_02434 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D SARI_03324 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D SARI_04216 hypothetical protein K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D SARI_03411 hypothetical protein K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D SARI_00738 hypothetical protein K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D SARI_01591 hypothetical protein K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes C Fur family D SARI_02249 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D SARI_03438 hypothetical protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D SARI_03469 hypothetical protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D SARI_01099 hypothetical protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D SARI_04149 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SARI_03743 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SARI_01322 hypothetical protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D SARI_00682 hypothetical protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator C Rrf2 family D SARI_00332 hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D SARI_03264 hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family C XRE family D SARI_01373 hypothetical protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family C Other families D SARI_02089 hypothetical protein K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D SARI_00442 hypothetical protein K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor D SARI_01059 hypothetical protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D SARI_03524 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D SARI_04245 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D SARI_03000 hypothetical protein K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D SARI_02558 hypothetical protein K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D SARI_04319 hypothetical protein K07724 ner; Ner family transcriptional regulator D SARI_03131 hypothetical protein K07724 ner; Ner family transcriptional regulator D SARI_03317 hypothetical protein K07724 ner; Ner family transcriptional regulator D SARI_04522 hypothetical protein K07724 ner; Ner family transcriptional regulator D SARI_02896 hypothetical protein K11925 sgrR; SgrR family transcriptional regulator D SARI_03003 hypothetical protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D SARI_03045 hypothetical protein K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D SARI_00132 hypothetical protein K12266 norR; anaerobic nitric oxide reductase transcription regulator D SARI_00113 hypothetical protein K15836 fhlA; formate hydrogenlyase transcriptional activator D SARI_02794 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D SARI_00388 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D SARI_00538 hypothetical protein K06714 rocR; arginine utilization regulatory protein D SARI_02163 hypothetical protein K02019 modE; molybdate transport system regulatory protein D SARI_03991 hypothetical protein K07726 K07726; putative transcriptional regulator D SARI_03092 hypothetical protein K07726 K07726; putative transcriptional regulator D SARI_03634 hypothetical protein K07726 K07726; putative transcriptional regulator B Ribbon-helix-helix C CopG family D SARI_04052 hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator C Other families D SARI_03557 hypothetical protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D SARI_01878 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D SARI_03204 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB B Other transcription factors C BglG family C Others D SARI_01355 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D SARI_04630 hypothetical protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D SARI_02488 hypothetical protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D SARI_03680 hypothetical protein K05785 rfaH; transcriptional antiterminator RfaH D SARI_04273 hypothetical protein K03402 argR; transcriptional regulator of arginine metabolism D SARI_02259 hypothetical protein K02565 nagC; N-acetylglucosamine repressor D SARI_01490 hypothetical protein K15545 mlc; transcriptional regulator of PTS gene D SARI_03953 hypothetical protein K02562 mtlR; mannitol operon repressor D SARI_01298 hypothetical protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D SARI_00319 hypothetical protein K03765 cadC; transcriptional activator of cad operon D SARI_00097 hypothetical protein K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1 D SARI_00392 hypothetical protein K03567 gcvR; glycine cleavage system transcriptional repressor D SARI_01279 hypothetical protein K03974 pspF; psp operon transcriptional activator D SARI_01282 hypothetical protein K03973 pspC; phage shock protein C D SARI_02319 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase D SARI_00214 hypothetical protein K07733 alpA; prophage regulatory protein D SARI_03879 hypothetical protein K07733 alpA; prophage regulatory protein D SARI_00926 hypothetical protein K07733 alpA; prophage regulatory protein D SARI_04549 hypothetical protein K07735 algH; putative transcriptional regulator D SARI_02936 hypothetical protein K08277 caiF; transcriptional activator CaiF D SARI_02811 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D SARI_02511 hypothetical protein K07738 nrdR; transcriptional repressor NrdR D SARI_02693 hypothetical protein K11926 crl; sigma factor-binding protein Crl D SARI_02883 hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0