+E Ribosome biogenesis KO
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Ribosome Biogenesis - Salmonella enterica subsp. arizonae
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D SARI_03281 hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C SARI_00298 hypothetical protein K03595 era; GTPase
C SARI_04323 hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C SARI_02811 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
C SARI_04337 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
C SARI_02508 hypothetical protein K03625 nusB; transcription antitermination protein NusB
C SARI_03516 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D SARI_00665 hypothetical protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SARI_02914 hypothetical protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SARI_04219 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SARI_03023 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SARI_04064 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SARI_04551 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SARI_01091 hypothetical protein K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D SARI_03777 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SARI_02882 hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SARI_04359 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SARI_04043 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
C 23S rRNA modification factors
D SARI_01105 hypothetical protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D SARI_03262 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SARI_04328 hypothetical protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SARI_02101 hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D SARI_04407 hypothetical protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D SARI_02291 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SARI_01930 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SARI_04040 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D SARI_01948 hypothetical protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D SARI_04682 hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D SARI_00353 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SARI_00005 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SARI_02048 hypothetical protein K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D SARI_02909 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SARI_01241 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SARI_01811 hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SARI_00264 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SARI_01753 hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D SARI_03464 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D SARI_00277 hypothetical protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
B ribosomal protein modification factors
C SARI_03022 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C SARI_01830 hypothetical protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C SARI_02055 hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
C SARI_01367 hypothetical protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
C SARI_00251 hypothetical protein K02860 rimM; 16S rRNA processing protein RimM
C SARI_02072 hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C SARI_01988 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
C SARI_04249 hypothetical protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
C SARI_00514 hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
C SARI_01761 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
B rRNA processing factors
C SARI_01812 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12]
C SARI_04263 hypothetical protein K08301 rng; ribonuclease G [EC:3.1.26.-]
C SARI_04548 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
C SARI_01328 hypothetical protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
C SARI_04344 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C SARI_00280 hypothetical protein K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
B GTPases
C SARI_00298 hypothetical protein K03595 era; GTPase
C SARI_03282 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C SARI_00360 hypothetical protein K03977 engA; GTPase
C SARI_04323 hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-]
C SARI_03269 hypothetical protein K03665 hflX; GTPase
B Other maturation factors
C SARI_04225 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C SARI_03897 hypothetical protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C SARI_04339 hypothetical protein K02834 rbfA; ribosome-binding factor A
C SARI_04336 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C SARI_02413 hypothetical protein K14761 rlbA; ribosome-associated protein
C SARI_02290 hypothetical protein K09710 ybeB; ribosome-associated protein
C SARI_02274 hypothetical protein K07042 ybeY; probable rRNA maturation factor
C SARI_04327 hypothetical protein K07574 yhbY; RNA-binding protein
C SARI_03951 hypothetical protein K14762 yibL; ribosome-associated protein
C SARI_03210 hypothetical protein K09889 yjgA; ribosome-associated protein
C SARI_04304 hypothetical protein K05808 hpf; ribosome hibernation promoting factor
C SARI_00262 hypothetical protein K05809 raiA; ribosome-associated inhibitor A
C SARI_01405 hypothetical protein K02972 sra; stationary-phase-induced ribosome-associated protein
C SARI_01168 hypothetical protein K06942 ychF; ribosome-binding ATPase
C SARI_01808 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024