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Mitochondrial Biogenesis - Sinorhizobium fredii USDA 257
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AMitochondrial DNA transcription, translation, and replication factors
B Mitochondrial DNA-encoded proteins
C Mitochondrial respiratory chain complex I
C Mitochondrial respiratory chain complex III
D USDA257_c40940 petB; cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
C Cytochrome c oxidase
C F-type ATPase
B Mitochondrial transcription and translation factors
C Mitochondrial RNA polymerase
C Mitochondrial transcription factors
C Mitochondrial translation factors
D USDA257_c60790 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D USDA257_c61270 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D USDA257_c35360 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D USDA257_c33880 tuf2; elongation factor Tu K02358 tuf; elongation factor Tu
D USDA257_c21860 elongation factor G-like protein K02355 fusA; elongation factor G
D USDA257_c33870 fusA; elongation factor G K02355 fusA; elongation factor G
C RNase MRP
C Mitochondrial ribonuclease P
C Other mitochondrial DNA transcription and translation factors
D USDA257_c09440 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D USDA257_c57300 ATP-dependent DNA and RNA helicase protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D USDA257_c08010 era; GTPase Era K03595 era; GTPase
D USDA257_c37960 tyrS; tyrosine--tRNA ligase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D USDA257_c58490 leuS; leucine--tRNA ligase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D USDA257_c09140 aspS; aspartate--tRNA ligase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D USDA257_c35620 argS; arginine--tRNA ligase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D USDA257_c33480 gatA2; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D USDA257_c60330 putative glutamyl-tRNA amidotransferase subunit A protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D USDA257_c56070 gatA3; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D USDA257_c33510 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D USDA257_c33470 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
B Mitochondrial DNA replication factors
C Mitochondrial DNA polymerase
C Mitochondrial DNA maintenance factors
C Other Mitochondrial DNA replication factors
D USDA257_c39900 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
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AMitochondrial protein import machinery
B Endoplasmic reticulum membrane and cytosol
C ER-mitochondria encounter structure (ERMES) complex
C Other ER-memrane and cytosol factors
B Outer membrane
C Transporter outer membrane (TOM) complex
C TOB/SAM complex
D USDA257_c35420 omp85; outer membrane protein Omp85 K07277 SAM50; outer membrane protein insertion porin family
C Porin
C ERMES complex
C Other outer membrane factor
B Inter membrane space
C Transporter inner membrane (TIM) 9/10 complex
C TIM8/13 complex
C Mitochondrial intermembrane space assembly (MIA) complex
B Inner mambrane
C MICOS complex
C MICOS complex (yeast)
C TIM22 complex
C TIM23 complex
C Mitochondrial calcium uniporter complex
C Other inner membrane factors
B Matrix
C MMC/PAM proteins
D USDA257_c60080 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D USDA257_c00130 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
C Other matrix factors
D USDA257_c05070 groL1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USDA257_c11630 groL3; 60 kDa chaperonin 3 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USDA257_c09160 groL2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USDA257_c16530 groL5; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USDA257_c56610 groL4; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D USDA257_c05080 groS1; 10 kDa chaperonin K04078 groES; chaperonin GroES
D USDA257_c11650 hypothetical protein K04078 groES; chaperonin GroES
D USDA257_c16540 groS2; 10 kDa chaperonin K04078 groES; chaperonin GroES
D USDA257_c60060 dnaJ3; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
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AMitochondrial quality control factors
B Regulator of mitochondrial biogenesis
C Ubiquitas transcription factors
D USDA257_c21860 elongation factor G-like protein K02355 fusA; elongation factor G
D USDA257_c33870 fusA; elongation factor G K02355 fusA; elongation factor G
C Nuclear respiratory factors
C Coactivators
C Proteins involved in Fe-S cluster biogenesis
D USDA257_c38000 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D USDA257_c60080 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D USDA257_c40550 grxC; putative monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
C Other regulator of mitochondrial biogenesis
B Mitochondrial respiratory chain complex assembly factors
C Complex-I assembly factors
D USDA257_c05410 mrp; protein mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
C Complex-II assembly factors
C Complex-III assembly factors
D USDA257_c09440 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
C Complex-IV assembly factors
D USDA257_c06230 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D USDA257_c06250 ctaG; cytochrome c oxidase assembly protein CtaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D USDA257_c32710 ctaA; heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D USDA257_c00780 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D USDA257_c06290 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D USDA257_c14320 putative surf1-like function K14998 SURF1; surfeit locus 1 family protein
D USDA257_c27070 cytochrome c oxidase Cu(A) center assembly protein K07152 SCO1; protein SCO1
D USDA257_c44790 SCO2-like protein K07152 SCO1; protein SCO1
D USDA257_c56630 SCO2-like protein K07152 SCO1; protein SCO1
C Complex-V assembly factors
B Mitochondrial dynamics
C Fission and Fusion factors
C Actin cytoskeleton organization
C Mitochondrial movement
C Retention of mitochondria
C Morphogenesis factors
B Mitophagy factors
C Autophagy-related proteins
C Parkin-dependent mechanism factors
C Parkin-independent mechanism factors
D USDA257_c10500 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C Other mitophagy factors
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 14, 2024