+D AMR gene KO
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Antimicrobial Resistance Genes - Serratia ficaria
%
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AGene variants
B beta-Lactamase genes
C Class A [MT]
C Class D [MT]
C Class C [MT]
C Class B [MT]
B Aminoglycoside resistance genes
C N-Acetyltransferases
C Other acetyltransferases
C O-Nucleotidyltransferases
C O-Phosphotransferases
D SAMEA4384070_2293 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
C 16S rRNA methyltransferases
B Tetracycline resistance genes
C Transporters
C Others
B Macrolide resistance genes
C 23S rRNA methyltransferases
C Transporters
D SAMEA4384070_0058 mdfA; Chloramphenicol resistance pump Cmr K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
C Others
B Phenicol resistance genes
C Transporters
C Acetyltransferases
C Phosphotransferase
C 23S rRNA methyltransferase
B Sulfonamide resistance genes
C Dihydropteroate synthase
B Trimethoprim resistance genes
C Dihydrofolate reductases
B Quinolone resistance genes
C Transporter
C Other
D SAMEA4384070_2115 pipB2_3; Type III effector pipB2 K18555 qnr; fluoroquinolone resistance protein
B Rifamycin resistance genes
C ADP-ribosyl transferases
C Oxygenases
B Fosfomycin resistance genes
C Transferases
C Others
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AGene sets
B beta-Lactam resistance modules
C Methicillin resistance [MD:M00625]
C beta-Lactam resistance, Bla system [MD:M00627]
C Imipenem resistance, repression of porin OprD [MD:M00745]
D SAMEA4384070_1547 yedV; Probable sensor-like histidine kinase YedV K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SAMEA4384070_3197 cusS; Sensor kinase CusS K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SAMEA4384070_1546 copR_1; Transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SAMEA4384070_3196 copR_2; Transcriptional activator protein CopR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
B Vancomycin resistance modules
C Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
D SAMEA4384070_2424 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
C Vancomycin resistance, D-Ala-D-Ser type [MD:M00652]
D B Tetracycline resistance
C Tetracycline resistance, efflux pump Tet38 [MD:M00704]
B CAMP resistance modules
C Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:M00725]
C Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [MD:M00726]
C Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [MD:M00730]
C Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:M00744]
D SAMEA4384070_2087 phoQ; Virulence sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SAMEA4384070_2088 phoP; Transcriptional regulatory protein phoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
B Multipdrug resistance modules
C Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
D SAMEA4384070_1155 acrA_1; Acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMEA4384070_2530 mexA_2; Multidrug resistance protein mexA precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMEA4384070_3812 acrA_3; Acriflavine resistance protein A precursor K03585 acrA; membrane fusion protein, multidrug efflux system
D SAMEA4384070_1154 acrB_1; Acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D SAMEA4384070_2529 mexB; Multidrug-efflux transporter MexB K18138 acrB; multidrug efflux pump
D SAMEA4384070_3813 acrB_3; Acriflavine resistance protein B K18138 acrB; multidrug efflux pump
D SAMEA4384070_2528 oprM; Outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
C Multidrug resistance, efflux pump MexCD-OprJ [MD:M00639]
C Multidrug resistance, efflux pump MexEF-OprN [MD:M00641]
C Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
D SAMEA4384070_2528 oprM; Outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
C Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
D SAMEA4384070_2528 oprM; Outer membrane protein oprM precursor K18139 oprM; outer membrane protein, multidrug efflux system
C Multidrug resistance, efflux pump MexPQ-OpmE [MD:M00769]
D SAMEA4384070_1181 cueR_1; Copper export regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C Multidrug resistance, efflux pump AdeABC [PATH:map01501] [MD:M00649]
C Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
D SAMEA4384070_4239 tolC_2; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
C Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
D SAMEA4384070_4239 tolC_2; Outer membrane protein tolC precursor K12340 tolC; outer membrane protein
C Multidrug resistance, efflux pump BpeEF-OprC [MD:M00698]
D SAMEA4384070_1441 dmlR_12; D-malate degradation protein R K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D SAMEA4384070_0677 dmlR_4; D-malate degradation protein R K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C Multidrug resistance, efflux pump AbcA [MD:M00700]
C Multidrug resistance, efflux pump NorB [MD:M00702]
C Multidrug resistance, efflux pump QacA [MD:M00714]
C Multidrug resistance, efflux pump MepA [MD:M00705]
C Multidrug resistance, repression of porin OmpF [MD:M00746]
D SAMEA4384070_1769 ompN; Porin OmpN K09476 ompF; outer membrane pore protein F
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 28, 2017