+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Scleropages formosus (Asian bonytongue)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 108927854 rnmt; mRNA cap guanine-N7 methyltransferase isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 108929338 rngtt; mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 108938462 cdk7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 108936559 cmtr1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 108926348 cmtr2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 108942059 ramac; RNA guanine-N7 methyltransferase activating subunit K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 108938681 ncbp1; nuclear cap-binding protein subunit 1 isoform X1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 108921603 nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 108933968 cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 108918993 nudt21; cleavage and polyadenylation specificity factor subunit 5 isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 108941214 cpsf7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 108920919 cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 108936530 cleavage and polyadenylation specificity factor subunit 6-like isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 108935929 clp1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 108924723 pcf11; LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 108919291 cpsf1; cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 108923973 cpsf2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 108929323 cpsf3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 108926307 cpsf4; cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 108922810 fip1l1; pre-mRNA 3'-end-processing factor FIP1 isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 108928989 pre-mRNA 3'-end-processing factor FIP1-like K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 108926833 wdr33; pre-mRNA 3' end processing protein WDR33 K15542 PFS2; polyadenylation factor subunit 2
E 108940226 wdr82; WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 108921956 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108929319 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108936091 ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108934323 serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108919391 serine/threonine-protein phosphatase alpha-2 isoform-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108941815 serine/threonine-protein phosphatase alpha-2 isoform-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108922004 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 108922700 ssu72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 108928197 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 108923375 cstf1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 108923144 cstf2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 108941183 cstf3; cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 108924824 sympk; symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 108936420 snrpb; small nuclear ribonucleoprotein-associated proteins B and B' isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 108921897 small nuclear ribonucleoprotein Sm D3-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 108935355 snrpd3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 108938237 snrpe; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 108920875 snrpf; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 108938051 snrpg; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 108931822 lsm10; U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 108936755 lsm11; U7 snRNA-associated Sm-like protein LSm11 isoform X1 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 108923973 cpsf2; cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 108929323 cpsf3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 108923144 cstf2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 108924824 sympk; symplekin K06100 SYMPK; symplekin
E 108936807 oocyte-specific histone RNA stem-loop-binding protein 2-like isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 108934301 uncharacterized protein LOC108934301 K18710 SLBP; histone RNA hairpin-binding protein
E 108920787 slbp; histone RNA hairpin-binding protein isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 108929182 casp8ap2; CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 108928285 supt4h1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 108928750 supt5h; transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 108930616 N6-adenosine-methyltransferase subunit METTL3 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 114911834 N6-adenosine-methyltransferase subunit METTL3 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 108924424 mettl14; N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 108937041 mettl4; methyltransferase-like protein 4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 108921289 mettl16; RNA N6-adenosine-methyltransferase METTL16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 108921107 wtap; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 108940551 virma; protein virilizer homolog isoform X2 K22910 VIRMA; protein virilizer
E 108928111 rbm15; RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 108931128 rbm15b; putative RNA-binding protein 15B isoform X1 K13190 RBM15; RNA-binding protein 15
E 108926869 zc3h13; zinc finger CCCH domain-containing protein 13 isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 108931666 cbll1; E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 108933807 papolg; poly(A) polymerase gamma K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 108924084 papola; poly(A) polymerase alpha isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 108927115 poly(A) polymerase gamma-like isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 108925121 tent2; poly(A) RNA polymerase GLD2 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 108928289 tut1; speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1 K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 108928924 bard1; BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 108918484 RNA-binding protein 26-like K13192 RBM26; RNA-binding protein 26
E 108930834 rbm26; RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
E 108926328 fto; alpha-ketoglutarate-dependent dioxygenase FTO K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 108926589 alkbh5; RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 108941731 RNA demethylase ALKBH5-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 108918549 TAR DNA-binding protein 43-like isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
E 108923254 tardbp; TAR DNA-binding protein 43 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 108938267 dhx40; probable ATP-dependent RNA helicase DHX40 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 108926688 kin; DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 108920715 mettl8; methyltransferase-like protein 8 isoform X1 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 108935792 mettl22; methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 108935870 terminal nucleotidyltransferase 5A-like K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 108929204 terminal nucleotidyltransferase 5A K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 114912191 tent5c; terminal nucleotidyltransferase 5C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 108920030 terminal nucleotidyltransferase 5C-like K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 108925311 tent5d; terminal nucleotidyltransferase 5D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 108936730 zc3h14; zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 108920358 srrt; serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 108926771 RNA-binding protein 8A-like K12876 RBM8A; RNA-binding protein 8A
E 108930384 rbm8a; RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 108935161 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 108935435 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 108936956 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 108939760 THO complex subunit 4-like isoform X1 K12881 THOC4; THO complex subunit 4
E 108935641 spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 108920837 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 108933725 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 108923327 ccdc174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 108918804 casc3; protein CASC3 isoform X1 K14323 CASC3; protein CASC3
E 108926935 sap18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 108919420 pnn; pinin K13114 PNN; pinin
E 108936641 pinin-like K13114 PNN; pinin
E 108930936 LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 108937851 acin1; apoptotic chromatin condensation inducer in the nucleus K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 114911832 apoptotic chromatin condensation inducer in the nucleus-like isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 108940976 rnps1; RNA-binding protein with serine-rich domain 1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 108930251 RNA-binding protein with serine-rich domain 1-like isoform X1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 108930737 srrm1; serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 108937477 thoc1; THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 108925422 THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 108934326 THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 108923019 thoc3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 108936956 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 108939760 THO complex subunit 4-like isoform X1 K12881 THOC4; THO complex subunit 4
E 108927534 thoc5; THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 108941667 thoc6; THO complex subunit 6 homolog isoform X1 K13175 THOC6; THO complex subunit 6
E 108923382 thoc7; THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 108937558 pcid2; PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 108933366 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 108940624 transcription and mRNA export factor ENY2-like isoform X1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 108925228 centrin-2 K10840 CETN2; centrin-2
E 108930058 cetn3; centrin-3 K16466 CETN3; centrin-3
E 108930355 mcm3ap; germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 108935156 nucleoprotein TPR-like isoform X1 K09291 TPR; nucleoprotein TPR
E 108935486 tpr; nucleoprotein TPR isoform X1 K09291 TPR; nucleoprotein TPR
E 108936594 rae1; mRNA export factor isoform X1 K14298 RAE1; mRNA export factor
E 108931093 sec13; protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 108931354 nup37; nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 108937191 nup85; nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85
E 108929287 nup43; nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 108942568 nup50; nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 108934855 nup54; nucleoporin p54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 108925331 nup62; nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 108928065 nup88; nuclear pore complex protein Nup88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 108933946 nup93; nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 108921251 nup98; nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 108936313 nup107; nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107
E 108933564 nup133; nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 108934362 nup188; nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188
E 108933420 nup153; nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 108931994 nup155; nuclear pore complex protein Nup155 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155
E 108929033 nup160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 108920267 nup35; nucleoporin NUP35 isoform X1 K14313 NUP35; nuclear pore complex protein Nup53
E 108931631 nup205; nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 108925554 nup210; nuclear pore membrane glycoprotein 210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 108927184 nup214; nuclear pore complex protein Nup214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 108924783 nuclear envelope pore membrane protein POM 121-like isoform X4 K14316 POM121; nuclear pore complex protein Nup121
E 108922394 nuclear envelope pore membrane protein POM 121-like K14316 POM121; nuclear pore complex protein Nup121
E 108939547 nup58; nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 108933426 nup42; nucleoporin-like protein 2 K14321 NUPL2; nucleoporin-like protein 2
E 108934957 ndc1; nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 108919234 seh1l; nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1
E 108940715 nucleoporin SEH1-like isoform X1 K14299 SEH1; nucleoporin SEH1
E 108920546 E3 SUMO-protein ligase RanBP2-like isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 108918714 senp2; sentrin-specific protease 2 isoform X1 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 108930455 aaas; aladin K14320 AAAS; aladin
E 108930058 cetn3; centrin-3 K16466 CETN3; centrin-3
E 108921879 gle1; nucleoporin GLE1 K18723 GLE1; nucleoporin GLE1
E 108925402 nxf1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 108925409 nxt2; NTF2-related export protein 2 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 108925902 GTP-binding nuclear protein Ran isoform X1 K07936 RAN; GTP-binding nuclear protein Ran
E 108921800 ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 108935951 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 108934588 anp32a; acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 108921619 acidic leucine-rich nuclear phosphoprotein 32 family member B-like K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 108936723 acidic leucine-rich nuclear phosphoprotein 32 family member B-like K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 108924308 anp32b; acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1 K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 108920238 tumor necrosis factor ligand superfamily member 13-like isoform X1 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 108930575 ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 108935192 ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 108919075 elavl4; ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 108925758 ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 108935869 elavl3; ELAV-like protein 3 isoform X3 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 108938805 elavl2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 108927675 faf2; FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2
E 108938081 transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 108925097 transitional endoplasmic reticulum ATPase-like K13525 VCP; transitional endoplasmic reticulum ATPase
E 108919758 transitional endoplasmic reticulum ATPase-like K13525 VCP; transitional endoplasmic reticulum ATPase
E 108941432 vcpkmt; protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 108926122 transportin-2-like K18727 TNPO2; transportin-2
E 108940393 transportin-2 K18727 TNPO2; transportin-2
E 108927150 exportin-1 isoform X1 K14290 XPO1; exportin-1
E 108933781 exportin-1-like K14290 XPO1; exportin-1
E 108922674 xpo7; exportin-7 isoform X1 K18460 XPO7; exportin-7
E 108926059 ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
E 108939769 ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
E 108922479 RNA-binding protein FUS-like K14651 TAF15; transcription initiation factor TFIID subunit 15
E 108928046 TATA-binding protein-associated factor 2N-like K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 108918748 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 108924775 eukaryotic translation initiation factor 4E-1B-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 108938721 eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E
E 108920901 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 108921726 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 108937414 eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 108921760 eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 108922813 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 108934687 eif4g2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 108918445 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 108932385 eif4g1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 108933502 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 108942187 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 108939040 eif4b; eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 108918172 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 108922481 eukaryotic translation initiation factor 4H-like isoform X1 K24086 EIF4H; translation initiation factor 4H
E 108924836 eukaryotic translation initiation factor 4H isoform X1 K24086 EIF4H; translation initiation factor 4H
E 108934754 eukaryotic translation initiation factor 4E-binding protein 1-like K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 108932034 eukaryotic translation initiation factor 4E-binding protein 1-like K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 114909437 eif4ebp2; eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 108936822 eif4ebp3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 108920137 eif4enif1; eukaryotic translation initiation factor 4E transporter isoform X5 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 108928448 angel2; protein angel homolog 2 K18729 ANGEL; protein angel
E 108930698 angel1; protein angel homolog 1 K18729 ANGEL; protein angel
E 108923195 fmr1; synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 108921436 fragile X mental retardation syndrome-related protein 1-like K15516 FMR; fragile X mental retardation protein
E 108929646 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 108937442 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 108933202 cyfip1; cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 108936855 cytoplasmic FMR1-interacting protein 2-like isoform X2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 108934408 cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 108920109 gemin5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 108921012 tacc3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 108925812 cpeb3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108936846 cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108922804 cpeb2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108934357 cytoplasmic polyadenylation element-binding protein 4-like isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108934604 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108942304 cpeb1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108926481 ATP-dependent RNA helicase DDX3X-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 108920550 putative ATP-dependent RNA helicase an3 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 108934057 GRB10-interacting GYF protein 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 108932427 gigyf2; GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 108929752 gigyf1; GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 108919323 polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 108927847 polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 108930432 embryonic polyadenylate-binding protein B-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 108931291 pabpc4; polyadenylate-binding protein 4 K13126 PABPC; polyadenylate-binding protein
E 108940707 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 108940587 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 108933224 paip1; polyadenylate-binding protein-interacting protein 1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 108922993 paip2; polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 108920166 paip2b; polyadenylate-binding protein-interacting protein 2B isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 108935683 skiv2l; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 108942139 deformed epidermal autoregulatory factor 1 homolog isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 108923015 mcts1; malignant T-cell-amplified sequence 1 K07575 MCTS; malignant T-cell-amplified sequence
E 108934843 denr; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 108939734 a1cf; APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 108939193 pym1; partner of Y14 and mago isoform X1 K14294 WIBG; partner of Y14 and mago
E 108918505 heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108920370 hnrnpa3; heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108939332 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108921740 RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 108921874 RNA-binding protein Musashi homolog 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 108932199 msi2; RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 108930589 dazap1; DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 108933524 RNA-binding protein Musashi homolog 1-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 108920555 hbs1l; HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 108919382 pelo; protein pelota homolog K06965 PELO; protein pelota
E 108930093 polyadenylate-binding protein 2-B-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 108927544 polyadenylate-binding protein 2-B-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 108934578 pabpn1l; embryonic polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 108939406 ATP-dependent RNA helicase DDX19A isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 108935750 xab2; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 108932526 sarnp; SAP domain-containing ribonucleoprotein isoform X2 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 108935711 rcc1; regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 108921381 la-related protein 6-like isoform X1 K18733 LARP6; la-related protein 6
E 108926247 la-related protein 6-like K18733 LARP6; la-related protein 6
E 108931936 larp6; la-related protein 6 K18733 LARP6; la-related protein 6
E 108923066 transcriptional activator protein Pur-alpha-like K21772 PURA; transcriptional activator protein Pur-alpha
E 114910447 pura; LOW QUALITY PROTEIN: transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 108940350 transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 114910729 purb; transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 108926028 polymerase delta-interacting protein 3-like isoform X1 K22414 POLDIP3; polymerase delta-interacting protein 3
E 108939789 polymerase delta-interacting protein 3-like K22414 POLDIP3; polymerase delta-interacting protein 3
E 108938235 zc3h11a; zinc finger CCCH domain-containing protein 11A isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 108924375 leng8; leukocyte receptor cluster member 8 K23802 LENG8; SAC3 family protein LENG8/THP3
E 108941563 patl2; protein PAT1 homolog 2 isoform X1 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 108934054 eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 108925494 eukaryotic peptide chain release factor subunit 1-like K03265 ETF1; peptide chain release factor subunit 1
E 108927585 gspt1; LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 108937448 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 108930585 upf1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 108931527 upf2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 108928964 regulator of nonsense transcripts 3A-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 108923013 upf3b; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 108929931 ppp2cb; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 108934452 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 108938118 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 108929745 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 108928737 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 108936239 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 108923631 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 108936847 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 108934333 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 108918894 ppp2r2d; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 108924200 ppp2r2c; protein phosphatase 2, regulatory subunit B, gamma isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 108919487 ppp2r3c; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 108920451 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 108927562 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 108926497 ppp2r3b; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 108935207 ppp2r3a; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 108929320 ppp2r5a; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 108930818 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 108918062 ppp2r5d; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 108920373 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 108919647 ppp2r5e; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X2 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 108925472 ppp2r5b; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 108941504 ppp2r5c; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 108941963 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 108937355 smg1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 108926799 smg5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 108932064 smg6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 108935216 smg7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 108928081 smg8; protein SMG8 K18734 SMG8; protein SMG8
E 108922196 smg9; protein SMG9 isoform X1 K18735 SMG9; protein SMG9
E 108934057 GRB10-interacting GYF protein 1-like isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 108932427 gigyf2; GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 108929752 gigyf1; GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 108929516 selenocysteine insertion sequence-binding protein 2 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 108942072 selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 108941272 secisbp2l; selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 108941164 dhx34; probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 108927505 gtpbp1; GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 108935963 pum3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
E 108926693 myo5c; unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 108929055 unconventional myosin-Va-like isoform X2 K10357 MYO5; myosin V
E 108935333 myo5b; unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 108926730 myo5a; unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 108919800 unconventional myosin-Vb-like K10357 MYO5; myosin V
E 108918582 protein bicaudal D homolog 2-like K18739 BICD; protein bicaudal D
E 108920728 protein bicaudal D homolog 1-like isoform X1 K18739 BICD; protein bicaudal D
E 108933829 protein bicaudal D homolog 2-like K18739 BICD; protein bicaudal D
E 108932595 protein bicaudal D homolog 2-like isoform X1 K18739 BICD; protein bicaudal D
E 108931418 bicd1; protein bicaudal D homolog 1 isoform X1 K18739 BICD; protein bicaudal D
E 108940245 bicd2; protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 108919512 exd1; piRNA biogenesis protein EXD1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 108922540 actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 108926888 actb; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 108940666 myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 108933345 myelin basic protein-like K17269 MBP; myelin basic protein
E 108918876 vim; vimentin K07606 VIM; vimentin
E 108939023 vimentin-like K07606 VIM; vimentin
E 108929493 vimentin-like K07606 VIM; vimentin
E 108933972 metallothionein-2-like isoform X1 K14739 MT1_2; metallothionein 1/2
E 108937539 myc; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 108942150 transcriptional regulator Myc-1-like K04377 MYC; Myc proto-oncogene protein
E 108921830 T-box-containing protein TBX6L-like K10180 TBX6; T-box protein 6
E 108933010 T-box transcription factor TBX6-like K10180 TBX6; T-box protein 6
E 108918870 nanos homolog 1-like K18741 NANOS1; protein nanos 1
E 108930894 nanos homolog 1-like K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 108938364 far upstream element-binding protein 3-like K13210 FUBP; far upstream element-binding protein
E 108923806 fubp1; far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein
E 108925963 far upstream element-binding protein 2-like K13210 FUBP; far upstream element-binding protein
E 108922573 far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 108938781 far upstream element-binding protein 2-like isoform X2 K13210 FUBP; far upstream element-binding protein
E 108931834 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 108931835 elongation factor 1-alpha, somatic form-like K03231 EEF1A; elongation factor 1-alpha
E 108937015 elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 108942351 elongation factor 1-alpha-like isoform X1 K03231 EEF1A; elongation factor 1-alpha
E 108927149 elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 108933756 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 108923204 eef1g; elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 108926571 hax1; HCLS1-associated protein X-1 K16220 HAX1; HCLS1-associated protein X-1
E 108922164 agfg1; arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 108923080 arf-GAP domain and FG repeat-containing protein 2-like isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 108938687 stau1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 108935408 stau2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 108933432 igf2bp3; insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 108930583 ptbp1; polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 108925812 cpeb3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108936846 cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108922804 cpeb2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108934357 cytoplasmic polyadenylation element-binding protein 4-like isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108934604 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108942304 cpeb1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 108923195 fmr1; synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 108921436 fragile X mental retardation syndrome-related protein 1-like K15516 FMR; fragile X mental retardation protein
E 108929646 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 108937442 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 108933202 cyfip1; cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 108936855 cytoplasmic FMR1-interacting protein 2-like isoform X2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 108934408 cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 108930456 pcbp2; poly(rC)-binding protein 2 K13162 PCBP2; poly(rC)-binding protein 2
E 108928399 poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 108931074 poly(rC)-binding protein 4-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 108924249 poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 108923695 poly(rC)-binding protein 3-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 108928632 poly(rC)-binding protein 3-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 108941937 poly(rC)-binding protein 4-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 108934697 caprin-1-like isoform X1 K18743 CAPRIN1; caprin-1
E 108940117 caprin1; caprin-1 K18743 CAPRIN1; caprin-1
E 108920774 caprin2; caprin-2 isoform X1 K18744 CAPRIN2; caprin-2
E 108918488 ybx1; nuclease-sensitive element-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 108926832 xrn1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 108919186 protein argonaute-1 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 108922003 ago2; protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 108931849 protein argonaute-4 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 108919176 protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 108918748 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 108924775 eukaryotic translation initiation factor 4E-1B-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 108938721 eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E
E 108920901 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 108930585 upf1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 108926481 ATP-dependent RNA helicase DDX3X-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 108920550 putative ATP-dependent RNA helicase an3 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 108922241 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 108941818 ddx6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 108926776 mex3a; RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 108930368 RNA-binding protein MEX3A-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 108940868 RNA-binding protein MEX3B-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 108942011 RNA-binding protein MEX3B-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 108919781 mex3d; RNA-binding protein MEX3D K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 108938011 mex3c; RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 108937493 fastk; fas-activated serine/threonine kinase K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 108932988 protein LSM14 homolog A-like isoform X1 K18749 LSM14; protein LSM14
E 108926244 protein LSM14 homolog A-like isoform X1 K18749 LSM14; protein LSM14
E 108936398 lsm14b; protein LSM14 homolog B K18749 LSM14; protein LSM14
E 108930456 pcbp2; poly(rC)-binding protein 2 K13162 PCBP2; poly(rC)-binding protein 2
E 108928399 poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 108918488 ybx1; nuclease-sensitive element-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
E 108930938 LIM domain-containing protein ajuba-like K16682 AJUBA; LIM domain-containing protein
E 114911947 LOW QUALITY PROTEIN: LIM domain-containing protein ajuba-like K16682 AJUBA; LIM domain-containing protein
E 108935713 limd1; LIM domain-containing protein 1 isoform X1 K16682 AJUBA; LIM domain-containing protein
E 108932949 Wilms tumor protein 1-interacting protein homolog isoform X1 K16682 AJUBA; LIM domain-containing protein
E 108928992 DNA dC->dU-editing enzyme APOBEC-3H-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 108930481 putative helicase mov-10-B.1 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 108928219 mov10; helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 108919104 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 108925031 tnpo1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
E 108937355 smg1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 108926799 smg5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 108932064 smg6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 108935216 smg7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 108922372 mRNA decay activator protein ZFP36L1-like isoform X1 K18753 ZFP36L; butyrate response factor
E 108931437 mRNA decay activator protein ZFP36L2-like K18753 ZFP36L; butyrate response factor
E 108924058 mRNA decay activator protein ZFP36L1-like isoform X1 K18753 ZFP36L; butyrate response factor
E 108928663 mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 108942668 zfp36l2; mRNA decay activator protein ZFP36L2 isoform X1 K18753 ZFP36L; butyrate response factor
E 108927587 lin28a; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 108937210 lin28b; protein lin-28 homolog B K18754 LIN28; protein lin-28
E 108925735 htt; huntingtin isoform X1 K04533 HD; huntingtin
E 108921025 ipo8; importin-8 K18755 IPO8; importin-8
E 108932836 protein bicaudal C homolog 1-like isoform X1 K18756 BICC1; protein bicaudal C
E 108925266 protein bicaudal C homolog 1-like K18756 BICC1; protein bicaudal C
E 108939515 bicc1; protein bicaudal C homolog 1 isoform X1 K18756 BICC1; protein bicaudal C
E 108918505 heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108920370 hnrnpa3; heterogeneous nuclear ribonucleoprotein A3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108939332 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108923518 prkacb; cAMP-dependent protein kinase catalytic subunit beta isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 108935762 cAMP-dependent protein kinase catalytic subunit alpha isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 108935274 cAMP-dependent protein kinase catalytic subunit beta isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 108919757 cAMP-dependent protein kinase catalytic subunit alpha-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 108920321 la-related protein 1-like isoform X1 K18757 LARP1; la-related protein 1
E 108929744 la-related protein 1-like K18757 LARP1; la-related protein 1
E 108933008 ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 108934822 atxn2; ataxin-2 isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 108941764 atxn2l; ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 108929971 dcp2; m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 108925620 dcp1a; mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 108920754 dcp1b; mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 108940362 lsm1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 108937357 lsm2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 108931268 lsm3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 108930554 lsm4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 108927684 lsm5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 108924439 lsm6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 108919845 lsm7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 108918719 lsm8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 108927084 kinesin light chain 1-like isoform X1 K10407 KLC; kinesin light chain
E 108926639 klc2; kinesin light chain 2 K10407 KLC; kinesin light chain
E 108919539 klc1; kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 108928771 kinesin light chain 1-like isoform X1 K10407 KLC; kinesin light chain
E 108926693 myo5c; unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 108929055 unconventional myosin-Va-like isoform X2 K10357 MYO5; myosin V
E 108935333 myo5b; unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 108926730 myo5a; unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 108919800 unconventional myosin-Vb-like K10357 MYO5; myosin V
E 108918420 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 108918534 tubulin alpha-1C chain-like K07374 TUBA; tubulin alpha
E 108920693 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 108920697 tubulin alpha chain K07374 TUBA; tubulin alpha
E 108920706 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 108928243 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha
E 108932580 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 108932549 tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 108932567 tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 108918121 tubulin alpha chain K07374 TUBA; tubulin alpha
E 114909334 tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 108920632 tubulin alpha-1A chain-like isoform X1 K07374 TUBA; tubulin alpha
E 108920633 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 114909073 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 108932550 tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 108932551 tubulin alpha-1C chain isoform X1 K07374 TUBA; tubulin alpha
E 108925812 cpeb3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108936846 cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108922804 cpeb2; cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108934357 cytoplasmic polyadenylation element-binding protein 4-like isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108934604 cytoplasmic polyadenylation element-binding protein 1-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108942304 cpeb1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 108920109 gemin5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 108921012 tacc3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 108926918 tnrc6a; trinucleotide repeat-containing gene 6A protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 108926132 trinucleotide repeat-containing gene 6B protein-like isoform X2 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 108940156 tnrc6c; trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 108939892 trinucleotide repeat-containing gene 6B protein-like K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 108937189 trinucleotide repeat-containing gene 6C protein-like isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 108937228 trinucleotide repeat-containing gene 6A protein-like K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 108926306 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 108936595 cnot2; CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 108942431 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 108925744 cnot3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 108931763 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 108936580 CCR4-NOT transcription complex subunit 4-like K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 108920738 CCR4-NOT transcription complex subunit 4-like isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 108925113 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 108936867 CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 108934472 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 108931092 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 108923756 cnot8; CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 108932984 uncharacterized protein KIAA0355-like K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 108921318 dis3l2; DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 108918544 pan2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 108923830 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X2 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 108939603 PAN2-PAN3 deadenylation complex subunit pan3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 108926063 tob2; protein Tob2 K14443 TOB; protein Tob/BTG
E 108936040 btg3; protein BTG3 isoform X1 K14443 TOB; protein Tob/BTG
E 108928714 maternal B9.15 protein-like K14443 TOB; protein Tob/BTG
E 108936073 protein BTG3-like K14443 TOB; protein Tob/BTG
E 108933592 protein BTG1-like K14443 TOB; protein Tob/BTG
E 108939801 tob1; protein Tob1 K14443 TOB; protein Tob/BTG
E 108923291 protein BTG2 K14443 TOB; protein Tob/BTG
E 108931621 btg1; protein BTG1 K14443 TOB; protein Tob/BTG
E 108929779 protein BTG1-like K14443 TOB; protein Tob/BTG
E 114912574 protein BTG2-like K14443 TOB; protein Tob/BTG
E 108920137 eif4enif1; eukaryotic translation initiation factor 4E transporter isoform X5 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 108929978 patl1; protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 108930154 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 108926202 enhancer of mRNA-decapping protein 3-like K12615 EDC3; enhancer of mRNA-decapping protein 3
E 108933994 edc4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 108941945 nanos homolog 3-like K18761 NANOS3; protein nanos 3
E 108931527 upf2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 108928964 regulator of nonsense transcripts 3A-like isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 108923013 upf3b; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 108940751 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 108919322 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 108923014 polr2g; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 108927142 interferon-induced, double-stranded RNA-activated protein kinase-like isoform X1 K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 108922774 zar1; zygote arrest protein 1 K18762 ZAR1; zygote arrest protein 1
E 108936161 zar1l; ZAR1-like protein K18762 ZAR1; zygote arrest protein 1
E 108937014 ythdf1; YTH domain-containing family protein 1 K20102 YTHDF; YTH domain-containing family protein
E 108923662 ythdf2; YTH domain-containing family protein 2 K20102 YTHDF; YTH domain-containing family protein
E 108929637 ythdf3; YTH domain-containing family protein 3 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 108929959 nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 108932892 tial1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 108940343 nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 108919323 polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 108927847 polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 108930432 embryonic polyadenylate-binding protein B-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 108931291 pabpc4; polyadenylate-binding protein 4 K13126 PABPC; polyadenylate-binding protein
E 108940707 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 108940587 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 108938687 stau1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 108935408 stau2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 108923195 fmr1; synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 108921436 fragile X mental retardation syndrome-related protein 1-like K15516 FMR; fragile X mental retardation protein
E 108929646 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 108937442 fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 108930575 ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 108935192 ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 108922827 g3bp1; ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 108936724 ras GTPase-activating protein-binding protein 2-like isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 108924315 ras GTPase-activating protein-binding protein 2-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 108932342 eif2a; eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 108922498 eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 108927506 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 108921726 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 108937414 eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 108921760 eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 108922813 eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 108920837 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 108933725 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 108939040 eif4b; eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 108918172 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 108934687 eif4g2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 108918445 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 108932385 eif4g1; eukaryotic translation initiation factor 4 gamma 1 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 108933502 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 108942187 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 108922258 ribosomal protein S6 kinase 2 alpha isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 108923820 ribosomal protein S6 kinase alpha-3-like K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 108920075 ribosomal protein S6 kinase alpha-6 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 108925442 rps6ka6; ribosomal protein S6 kinase alpha-6 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 108932772 ribosomal protein S6 kinase alpha-2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 108939623 rps6ka3; ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 108934349 receptor of activated protein C kinase 1-like K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 108936744 receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 108922584 TNF receptor-associated factor 2-like isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 108929927 TNF receptor-associated factor 2-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 108938148 TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 108925402 nxf1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 108934846 hdac6; histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 108927707 tdrd3; tudor domain-containing protein 3 K18404 TDRD3; tudor domain-containing protein 3
E 108918479 la-related protein 4-like isoform X2 K18763 LARP4; la-related protein 4
E 108939413 la-related protein 4-like isoform X2 K18763 LARP4; la-related protein 4
E 108937489 larp4b; la-related protein 4B K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 108925620 dcp1a; mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 108920754 dcp1b; mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 108929971 dcp2; m7GpppN-mRNA hydrolase K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 108922241 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 108941818 ddx6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 108930154 enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 108926202 enhancer of mRNA-decapping protein 3-like K12615 EDC3; enhancer of mRNA-decapping protein 3
E 108933994 edc4; enhancer of mRNA-decapping protein 4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 108929978 patl1; protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 108940362 lsm1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 108937357 lsm2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 108931268 lsm3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 108930554 lsm4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 108927684 lsm5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 108924439 lsm6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 108919845 lsm7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 108918719 lsm8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 108926832 xrn1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 108918382 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 108921345 dcps; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 108939874 helz; probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 108918904 exosc1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 108942710 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
E 108922624 exosc2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 108938735 exosc3; exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 108938308 exosc4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 108941540 exosc5; exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 108933978 exosc6; exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 108935720 exosc7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 108936210 exosc8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 108924423 exosc9; exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 108920489 dis3; exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 108926723 dis3l; DIS3-like exonuclease 1 isoform X1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 108934900 exosc10; exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 108927155 c1d; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 108932933 mphosph6; M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 108919239 terminal nucleotidyltransferase 4A-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 108932940 terminal nucleotidyltransferase 4A-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 108926192 terminal nucleotidyltransferase 4A-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 108940481 terminal nucleotidyltransferase 4A-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 108925908 zcchc7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 108925051 mtrex; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 108935683 skiv2l; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 108938651 ttc37; tetratricopeptide repeat protein 37 isoform X1 K12600 SKI3; superkiller protein 3
E 108942412 wdr61; WD repeat-containing protein 61 isoform X1 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 108925113 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 108936867 CCR4-NOT transcription complex subunit 6 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 108934472 CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 108926306 CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 108936595 cnot2; CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 108942431 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 108925744 cnot3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 108931763 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 108936580 CCR4-NOT transcription complex subunit 4-like K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 108920738 CCR4-NOT transcription complex subunit 4-like isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 108931092 CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 108923756 cnot8; CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 108924222 cnot9; CCR4-NOT transcription complex subunit 9 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 108930131 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 108919227 cnot10; CCR4-NOT transcription complex subunit 10 isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 108918544 pan2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 108923830 PAN2-PAN3 deadenylation complex subunit pan3-like isoform X2 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 108939603 PAN2-PAN3 deadenylation complex subunit pan3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 108929598 parn; poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 108932471 dhx36; ATP-dependent DNA/RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 108926063 tob2; protein Tob2 K14443 TOB; protein Tob/BTG
E 108936040 btg3; protein BTG3 isoform X1 K14443 TOB; protein Tob/BTG
E 108928714 maternal B9.15 protein-like K14443 TOB; protein Tob/BTG
E 108936073 protein BTG3-like K14443 TOB; protein Tob/BTG
E 108933592 protein BTG1-like K14443 TOB; protein Tob/BTG
E 108939801 tob1; protein Tob1 K14443 TOB; protein Tob/BTG
E 108923291 protein BTG2 K14443 TOB; protein Tob/BTG
E 108931621 btg1; protein BTG1 K14443 TOB; protein Tob/BTG
E 108929779 protein BTG1-like K14443 TOB; protein Tob/BTG
E 114912574 protein BTG2-like K14443 TOB; protein Tob/BTG
E 108925729 nocturnin-like isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 108930757 nocturnin-like isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 108932402 eri1; 3'-5' exoribonuclease 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 108926384 eri2; ERI1 exoribonuclease 2 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 108921345 dcps; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 108929781 pde12; 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 108942378 ireb2; iron-responsive element-binding protein 2 K22416 IREB2; iron-responsive element-binding protein 2
E 108939874 helz; probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 108918480 helz2; helicase with zinc finger domain 2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 108919351 nrde2; protein NRDE2 homolog isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2
E 108919369 samd4a; protein Smaug homolog 1 K27396 SMG; protein Smaug
E 108942089 samd4b; protein Smaug homolog 2 isoform X1 K27396 SMG; protein Smaug
E 108938767 focad; focadhesin K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 108927805 zc3h12a; endoribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 108929139 zc3h12d; probable ribonuclease ZC3H12D isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 108925235 probable ribonuclease ZC3H12B isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 108926866 probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 108919958 probable ribonuclease ZC3H12B isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
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AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 108927605 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 108921552 rexo2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 108920210 eno3; beta-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 108923211 beta-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 108922086 eno2; gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 108933930 eno1; alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 108928035 alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 108932766 pnpt1; polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 108929442 ATP-dependent 6-phosphofructokinase, liver type-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 108937687 pfkp; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 108918432 ATP-dependent 6-phosphofructokinase, muscle type-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 108918690 ATP-dependent 6-phosphofructokinase, liver type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 108939069 ATP-dependent 6-phosphofructokinase, muscle type-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 108923089 hspa9; stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 108918916 60 kDa heat shock protein, mitochondrial-like isoform X1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 108926488 hspd1; 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 108922624 exosc2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 108918904 exosc1; exosome complex component CSL4 K07573 CSL4; exosome complex component CSL4
E 108942710 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
D Cofactors
E 108938308 exosc4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 108935720 exosc7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024