+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Shigella flexneri 2003036

% ! ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins D SFy_3950 putative helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C SFy_6263 type III restriction enzyme, res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C SFy_6260 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C SFy_6261 Type I restriction enzyme EcoEI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D SFy_4838 Dam methyltransferase with SUUR K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SFy_4707 methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D SFy_2869 Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok D SFy_5115 HokA K18920 hokA; protein HokA D SFy_0020 regulatory protein mokC K18919 hokC_D; protein HokC/D D SFy_0636 hypothetical protein K18922 hokE; protein HokE D SFy_0638 hypothetical protein K18922 hokE; protein HokE C SymE-SymR D SFy_0793 hypothetical protein K19048 symE; toxic protein SymE D SFy_6259 hypothetical protein K19048 symE; toxic protein SymE C Ldr-Rdl D SFy_1762 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D SFy_5084 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D SFy_5086 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D SFy_5088 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D SFy_5091 hypothetical protein K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS D SFy_4882 hypothetical protein K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D SFy_4881 hypothetical protein K18842 chpS; antitoxin ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D SFy_2223 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN D SFy_0379 YafO K19160 yafO; mRNA interferase YafO [EC:3.1.-.-] D SFy_0378 YafN K19161 yafN; antitoxin YafN C PspC-PspB D SFy_1881 Phage shock protein C K03973 pspC; phage shock protein C D SFy_1880 PsPB K03970 pspB; phage shock protein B C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA D SFy_4461 mRNA interferase HigB K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D SFy_4460 DNA-binding helix-turn-helix protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D SFy_0543 YbaQ K21498 higA-1; antitoxin HigA-1 D SFy_2503 YddM K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C SpoIISA-SpoIISB C Tse6-Tsi6 C Type II TA system related factors D SFy_6084 YjgK K19334 tabA; biofilm protein TabA D SFy_1029 YbiM K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A D SFy_1537 biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS D SFy_1066 biofilm formation regulatory protein BssR K19688 bssR; biofilm regulator BssR D SFy_1606 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA D SFy_0117 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SFy_4694 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D SFy_4373 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D SFy_4382 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SFy_3496 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU D SFy_1472 hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D SFy_4280 hypothetical protein K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D SFy_1471 putative antitoxin module of toxin-antitoxin system K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D SFy_4279 putative structural protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins C CptA-CptB D SFy_4104 hypothetical protein K19168 cptA; toxin CptA D SFy_4105 hypothetical protein K09159 cptB; antitoxin CptB C AbiEii-AbiEi B Type V TA system C GhoT-GhoS C Other GhoT/OrtT toxin family protein D SFy_2535 hypothetical protein K28274 ortT; orphan toxin OrtT B Type VI TA system C SocB-SocA B Type VII TA system C Hha-TomB D SFy_0512 Modulator of gene expression, with H-NS K05839 hha; haemolysin expression modulating protein D SFy_0513 YbaJ K19162 tomB; hha toxicity modulator TomB C TglT-TakA C HepT-MntA B Type VIII TA system C SdsR-RyeA # ADNA phosphothiolation system B Sulfur modification proteins C SFy_3663 YfhO K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2025