+C Peptidases and inhibitors KO
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Peptidases and Inhibitors - Shigella flexneri 8401 (serotype 5b)
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AAspartic peptidases
B Family A1: pepsin family
B Family A2: retropepsin family
B Family A5: thermopsin family
B Family A8: signal peptidase II family
C SFV_0021 lspA; prolipoprotein signal peptidase (SPase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
B Family A22: presenilin family
B Family A24: type IV prepilin peptidase family
C SFV_3341 hopD; putative leader peptidase K02506 hofD; leader peptidase HopD [EC:3.4.23.43]
B Family A25: gpr protease family
B Family A26: omptin family
B Family A28
B Family A31: HybD endopeptidase family
C SFV_0984 hyaD; processing of HyaA and HyaB proteins K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
C SFV_3046 hybD; probable processing element for hydrogenase-2 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
C SFV_2786 hycI; protease involved in processing C-terminal end of the large subunit of hydrogenase 3 K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
B Family A36
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ACysteine peptidases
B Family C1: papain family
B Family C2: calpain family
B Family C3: picornain family
B Family C4: NIa protease family
B Family C5
B Family C9
B Family C10: streptopain family
B Family C11: clostripain family
B Family C12: ubiquitin C-terminal hydrolase family
B Family C13: legumain family
B Family C14: caspase family
B Family C15: pyroglutamyl peptidase I family
B Family C16
B Family C19: ubiquitin-specific protease family
B Family C25: gingipain family
B Family C26: gamma-glutamyl hydrolase family
C SFV_2554 guaA; GMP synthetase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
C SFV_1312 ycjL; probable amidotransferase subunit K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
B Family C27
B Family C30
B Family C37
B Family C39
B Family C40
C SFV_2253 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
C SFV_1677 ydhO; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
C SFV_0303 yafL; putative lipoprotein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
C SFV_1515 nlpC; lipoprotein K13695 nlpC; probable lipoprotein NlpC
B Family C44
C SFV_2381 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C SFV_3242 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C SFV_3755 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C SFV_0657 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
B Family C45
B Family C46: hedgehog family
B Family C47: staphopain family
B Family C48: Ulp1 endopeptidase family
B Family C50: separase family
B Family C54: Aut2 peptidase family
B Family C55: YopJ protease family
B Family C56: PfpI endopeptidase family
C SFV_2012 yedU; conserved hypothetical protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
C SFV_3183 yhbO; conserved hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124]
C SFV_0389 thiJ; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis K03152 thiJ; protein deglycase [EC:3.5.1.124]
B Family C57: vaccinia virus I7 peptidase family
B Family C58
B Family C59
B Family C60
B Family C63
B Family C64
B Family C65
B Family C67
B Family C69
B Family C70
B Family C75
B Family C76
B Family C78
B Family C79
B Family C82
C SFV_2062 erfK; conserved hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
C SFV_1701 ynhG; conserved hypothetical protein K19234 ynhG; L,D-transpeptidase YnhG
C SFV_0802 ybiS; conserved hypothetical protein K19235 ybiS; L,D-transpeptidase YbiS
C SFV_1133 ycfS; conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
C SFV_0927 ycbB; putative amidase K21470 ycbB; L,D-transpeptidase YcbB
B Family C83
B Family C85
B Family C86
B Family C88
B Family C89
B Family C97
B Family C98
B Family C110
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AGlutamic peptidases
B Family G1
B Family G4
B Family G5: prenyl protease 2 family
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AMetallo peptidases
B Family M1
C SFV_0934 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
B Family M2
B Family M3
C SFV_3510 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
C SFV_1552 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
B Family M4: thermolysin family
B Family M5: mycolysin family
B Family M6: immune inhibitor A family
B Family M7: snapalysin family
B Family M8: leishmanolysin family
B Family M9
B Family M10
B Family M12: astacin/adamalysin family
B Family M13: neprilysin family
B Family M14: carboxypeptidase A family
B Family M15: zinc D-Ala-D-Ala carboxypeptidase family
C SFV_1735 conserved hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
B Family M16: pitrilysin family
C SFV_2899 ptr; protease III K01407 ptrA; protease III [EC:3.4.24.55]
B Family M17: leucyl aminopeptidase family
C SFV_4233 pepA; aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
C SFV_2571 pepB; putative peptidase K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
B Family M18
B Family M19: membrane dipeptidase family
B Family M20
C SFV_2516 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C SFV_1145 pepT; putative peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
C SFV_0293 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
C SFV_0477 ylbB; putative hydantoin utilization protein K02083 allC; allantoate deiminase [EC:3.5.3.9]
B Family M23
C SFV_1858 yebA; conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
B Family M24
C SFV_0151 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
C SFV_3653 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
C SFV_2956 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
B Family M26
B Family M27
B Family M28: aminopeptidase Y family
C SFV_2745 iap; Alkaline phosphatase isozyme conversion protein precursor K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
B Family M29: aminopeptidase T family
B Family M32: carboxypeptidase Taq family
B Family M34: anthrax lethal factor family
B Family M35: deuterolysin family
B Family M36: fungalysin family
B Family M38: beta-aspartyl dipeptidase family
C SFV_4198 iadA; isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
B Family M41: FtsH endopeptidase family
C SFV_3208 hflB; ATP-dependent zinc-metallo protease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
B Family M42: glutamyl aminopeptidase family
C SFV_3597 frvX; frv operon protein K18530 frvX; putative aminopeptidase FrvX [EC:3.4.11.-]
B Family M43: cytophagalysin family
B Family M44
B Family M48: Ste24 endopeptidase family
C SFV_1400 htpX; heat shock protein, integral membrane protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
C SFV_0910 ycaL; putative heat shock protein K07387 K07387; metalloprotease [EC:3.4.24.-]
C SFV_2988 yggG; conserved hypothetical protein K07387 K07387; metalloprotease [EC:3.4.24.-]
C SFV_2539 conserved hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
B Family M49: dipeptidyl-peptidase III family
B Family M50: S2P protease family
C SFV_0159 yaeL; conserved hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
B Family M54
B Family M55: DppA aminopeptidase family
B Family M56
B Family M67
B Family M72
B Family M73
B Family M74
C SFV_2397 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
B Family M80
B Family M82
B Family M85
B Family M88
B Family M90
C SFV_2045 conserved hypothetical protein K09933 mtfA; MtfA peptidase
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AAsparagine peptide lyases
B Family N1
B Family N8
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AMixed peptidases
B Family P1: DmpA aminopeptidase family
B Family P2
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ASerine peptidases
B Family S1: chymotrypsin family
C SFV_1613 conserved hypothetical protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
C SFV_0146 htrA; periplasmic serine protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
C SFV_3261 degQ; serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
C SFV_3262 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
B Family S3: togavirin family
B Family S6
B Family S7: flavivirin family
B Family S8: subtilisin family
B Family S9: prolyl oligopeptidase family
C SFV_1847 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
B Family S10
B Family S11: D-Ala-D-Ala carboxypeptidase A family
C SFV_0694 dacA; penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C SFV_2210 pbpG; penicillin-binding protein 7 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
B Family S12: D-Ala-D-Ala carboxypeptidase B family
C SFV_0339 yaiH; putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
B Family S13: D-Ala-D-Ala peptidase C family
C SFV_3212 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
B Family S14: ClpP endopeptidase family
C SFV_0411 clpP; ATP-dependent proteolytic subunit of clpA-clpP serine protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
B Family S15
B Family S16: lon protease family
C SFV_0413 lon; DNA-binding, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C SFV_0963 putative ATP-dependent protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
B Family S21: assemblin family
B Family S24: LexA family
C SFV_4170 lexA; regulator for SOS(lexA) regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
C SFV_1190 umuD; SOS mutagenesis K03503 umuD; DNA polymerase V [EC:3.4.21.-]
B Family S26: signal peptidase I family
C SFV_2631 lepB; leader peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
B Family S28
B Family S31
B Family S32
B Family S33
B Family S41: C-terminal processing peptidase family
C SFV_1399 prc; carboxy-terminal protease for penicillin-binding protein 3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
B Family S45
B Family S49: protease IV family
C SFV_1451 sppA; protease IV, a signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
C SFV_1284 sohB; putative protease K04774 sohB; serine protease SohB [EC:3.4.21.-]
B Family S50
B Family S51
C SFV_4092 pepE; peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
B Family S53
B Family S54: Rhomboid family
C SFV_3431 glpG; protein of glp regulon K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
B Family S55: SpoIVB peptidase family
B Family S62
B Family S66
C SFV_1201 conserved hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
B Family S77: phage prohead processing peptidase family
B Family S78
C SFV_1157 putative head maturation protease of prophage K06904 GP4; Escherichia/Staphylococcus phage prohead protease
C SFV_0238 putative prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
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AThreonine peptidases
B Family T1: proteasome family
C SFV_4003 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
B Family T2
C SFV_0811 ybiK; putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
B Family T3: gamma-glutamyltransferase family
C SFV_3450 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
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APeptidases of unknown catalytic type
B Family U32
C SFV_2142 yegQ; conserved hypothetical protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C SFV_3189 yhbV; conserved hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
C SFV_3188 yhbU; putative collagenase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
B Family U62
C SFV_4256 pmbA; PmbA protein K03592 pmbA; PmbA protein
C SFV_3271 tldD; suppresses inhibitory activity of CsrA K03568 tldD; TldD protein
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APeptidase inhibitors
B Family I1: Kazal family
B Family I2: Kunitz - BPTI family
B Family I4: serpin family
B Family I11: ecotin family
C SFV_2284 eco; ecotin, a serine protease inhibitor K08276 eco; ecotin
B Family I17: WAP-type family
B Family I25: cystatin family
B Family I27: calpastatin family
B Family I32: IAP family
B Family I34: IA3 family
B Family I35: timp family
B Family I39: alpha2M family
B Family I47: latexin family
B Family I49: proSAAS family
B Family I51: IC family
B Family I57: staphostatin B family
B Family I63
B Family I80
B Family I87
C SFV_4333 hflC; protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC
C SFV_4332 hflK; protease specific for phage lambda cII repressor K04088 hflK; modulator of FtsH protease HflK
B Family I93
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 29, 2024
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Classification taken and modified from MEROPS