+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Spiroplasma floricola

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D SFLOR_v1c08910 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C SFLOR_v1c07810 era; GTP-binding protein Era K03595 era; GTPase C SFLOR_v1c03560 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C SFLOR_v1c03970 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C SFLOR_v1c05900 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB C SFLOR_v1c00350 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D SFLOR_v1c11260 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SFLOR_v1c09070 sunL; RNA-binding Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D SFLOR_v1c09090 N6-adenine-specific methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SFLOR_v1c04030 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D SFLOR_v1c11130 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SFLOR_v1c08310 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SFLOR_v1c02800 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D SFLOR_v1c05990 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D SFLOR_v1c00310 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D SFLOR_v1c03340 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D SFLOR_v1c09050 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D SFLOR_v1c05990 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D SFLOR_v1c03080 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SFLOR_v1c01090 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D SFLOR_v1c08120 rluD; ribosomal large subunit pseudouridylate synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C SFLOR_v1c03510 rimM; 16S rRNA processing protein rimM K02860 rimM; 16S rRNA processing protein RimM B rRNA processing factors C SFLOR_v1c08910 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C SFLOR_v1c02350 ruvX; Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C SFLOR_v1c04170 cshB; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C SFLOR_v1c07810 era; GTP-binding protein Era K03595 era; GTPase C SFLOR_v1c09010 engC; ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C SFLOR_v1c03210 engA; GTP-binding protein EngA K03977 engA; GTPase C SFLOR_v1c03560 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] C SFLOR_v1c03350 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A C SFLOR_v1c04960 yqeH; 30S ribosome assembly GTPase K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C SFLOR_v1c09310 tsaC; L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C SFLOR_v1c04330 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C SFLOR_v1c04010 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C SFLOR_v1c07920 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C SFLOR_v1c07890 hypothetical protein K07042 ybeY; probable rRNA maturation factor C SFLOR_v1c11090 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024