+F Repair protein KO #

  DNA Repair and Recombination Proteins - Streptococcus gallolyticus UCN34

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D GALLO_1742 ogt; putative 6-O-methylguanine-DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] C BER (base exicision repair) D DNA glycosylases E GALLO_0972 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E GALLO_1925 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E GALLO_0826 nth; endonuclease III (DNA repair) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D GALLO_0611 conserved hypothetical protein, MutT/nudix family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GALLO_0833 putative 7,8-dihydro-8-oxoguanine-triphosphatase (MutT) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GALLO_1402 putative NTP pyrophosphohydrolases, MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GALLO_2088 dut; Deoxy UTP pyrophosphatase (dUTPase) K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D GALLO_1742 ogt; putative 6-O-methylguanine-DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] C BER (base exicision repair) D DNA glycosylases E GALLO_0972 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E GALLO_1925 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E GALLO_1156 conserved hypothetical protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E GALLO_1628 mutM; putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E GALLO_0826 nth; endonuclease III (DNA repair) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E GALLO_1733 putative 3'-exo-deoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ E GALLO_0813 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E GALLO_0779 ligA; DNA ligase (NAD-dependent) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E GALLO_2109 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E GALLO_1904 uvrA; excinuclease ABC K03701 uvrA; excinuclease ABC subunit A E GALLO_1404 uvrB; excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B E GALLO_0927 uvrC; excinuclease ABC (subunit C) K03703 uvrC; excinuclease ABC subunit C E GALLO_1064 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E GALLO_1187 Putative ATP-dependent DNA helicase (DNA helicase II) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E GALLO_2109 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E GALLO_0779 ligA; DNA ligase (NAD-dependent) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F GALLO_0084 rpoB; RNA polymerase (beta subunit) K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F GALLO_0085 rpoC; RNA polymerase (beta' subunit) K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F GALLO_0076 rpoA; RNA polymerase (alpha subunit) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F GALLO_0252 rpoE; RNA polymerase (delta subunit) K03048 rpoE; DNA-directed RNA polymerase subunit delta F GALLO_0489 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F GALLO_0007 mfd; Transcription repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E GALLO_2199 mutS; DNA Mismatch repair ATPase (MutS family) K03555 mutS; DNA mismatch repair protein MutS E GALLO_1941 mutS2; Mismatch repair ATPase (MutS family) K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E GALLO_2198 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases E GALLO_0627 putative exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E GALLO_0628 putative exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E GALLO_0988 dnaE; DNA polymerase III, subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E GALLO_0209 polC; DNA polymerase III (alpha subunit) K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] E GALLO_0002 dnaN; DNA polymerase III (beta subunit) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E GALLO_0661 holA; hypothetical DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E GALLO_1753 holB; DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E GALLO_1969 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E GALLO_0764 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E GALLO_0779 ligA; DNA ligase (NAD-dependent) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E GALLO_1064 putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E GALLO_1187 Putative ATP-dependent DNA helicase (DNA helicase II) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E GALLO_0108 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein E GALLO_0285 putative single strand binding protein K03111 ssb; single-strand DNA-binding protein E GALLO_1911 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E GALLO_1950 putative exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E GALLO_2191 recA; recombination protein A K03553 recA; recombination protein RecA E GALLO_2197 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA E GALLO_2181 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E GALLO_0490 priA; primosomal replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D RecFOR pathway proteins E GALLO_2191 recA; recombination protein A K03553 recA; recombination protein RecA E GALLO_2087 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms E GALLO_2253 recF; recombination protein RecF K03629 recF; DNA replication and repair protein RecF E GALLO_1885 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E GALLO_0813 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E GALLO_0022 recO; putative DNA repair and homologous recombination RecO K03584 recO; DNA repair protein RecO (recombination protein O) E GALLO_0649 recR; recombination protein RecR K06187 recR; recombination protein RecR E GALLO_0632 recN; DNA repair and genetic recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E GALLO_0480 recU; recombination protein RecU K03700 recU; recombination protein U E GALLO_2197 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA E GALLO_2181 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AddAB pathway proteins E GALLO_0803 rexA; ATP-dependent deoxyribonuclease (subunit A) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] E GALLO_0802 rexB; ATP-dependent deoxyribonuclease (subunit B) K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D Other HR factor E GALLO_1438 cas1; Crispr-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 E GALLO_1445 CRISPR-associated protein Cas1-like K15342 cas1; CRISP-associated protein Cas1 D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F GALLO_1128 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F GALLO_1476 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F GALLO_1096 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F GALLO_0636 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F GALLO_0813 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F GALLO_0022 recO; putative DNA repair and homologous recombination RecO K03584 recO; DNA repair protein RecO (recombination protein O) F GALLO_0649 recR; recombination protein RecR K06187 recR; recombination protein RecR F GALLO_0779 ligA; DNA ligase (NAD-dependent) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F GALLO_1904 uvrA; excinuclease ABC K03701 uvrA; excinuclease ABC subunit A F GALLO_1404 uvrB; excinuclease ABC (subunit B) K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D GALLO_1952 putative DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D GALLO_2191 recA; recombination protein A K03553 recA; recombination protein RecA D GALLO_0632 recN; DNA repair and genetic recombination protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D GALLO_0108 ssbB; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GALLO_0285 putative single strand binding protein K03111 ssb; single-strand DNA-binding protein D GALLO_1911 ssbA; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D GALLO_0507 recX; putative RecA regulator RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D GALLO_1491 DnaQ family exonuclease/DinG family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C Modulation of nucleotide pools D GALLO_0611 conserved hypothetical protein, MutT/nudix family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GALLO_0833 putative 7,8-dihydro-8-oxoguanine-triphosphatase (MutT) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GALLO_1402 putative NTP pyrophosphohydrolases, MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D GALLO_2088 dut; Deoxy UTP pyrophosphatase (dUTPase) K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D GALLO_0705 nrdE; ribonucleoside-diphosphate reductase (major subunit) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D GALLO_0704 nrdF; ribonucleoside-diphosphate reductase (minor subunit) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others D GALLO_0742 conserved hypothetical protein, DHH family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025