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Transcription Machinery - Streptomyces griseofuscus
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
E HEP81_04267 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E HEP81_03229 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E HEP81_03277 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E HEP81_03276 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E HEP81_06307 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E HEP81_05308 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E HEP81_02228 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
E HEP81_03098 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_03189 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_03470 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_03903 sigM; RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_05129 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_06510 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_06841 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_07602 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_00157 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_02151 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_02798 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_03073 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_02880 sigE; RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_07499 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_03402 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_04321 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_00801 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_03100 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E HEP81_03419 RNA polymerase sigma factor sig8 K03090 sigB; RNA polymerase sigma-B factor
E HEP81_04009 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E HEP81_04010 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E HEP81_04748 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E HEP81_07037 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E HEP81_07073 SigB/SigF/SigG family RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E HEP81_07087 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E HEP81_07649 RNA polymerase sigma factor sig8 K03090 sigB; RNA polymerase sigma-B factor
E HEP81_07774 SigB/SigF/SigG family RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
E HEP81_01671 RNA polymerase sigma factor sig8 K03090 sigB; RNA polymerase sigma-B factor
E HEP81_02780 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
E HEP81_02420 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
C Other transcription-related factors
D RNA polymerase-associated proteins
E HEP81_02353 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
E HEP81_06295 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
E HEP81_03283 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E HEP81_07668 anti-sigma factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E HEP81_00556 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E HEP81_02391 serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E HEP81_07667 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
E HEP81_00555 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
E HEP81_02392 STAS domain-containing protein K17762 rsbS; rsbT antagonist protein RsbS
E HEP81_07666 regulatory protein K17763 rsbR; rsbT co-antagonist protein RsbR
E HEP81_00554 regulatory protein K17763 rsbR; rsbT co-antagonist protein RsbR
E HEP81_02393 STAS domain-containing protein K17763 rsbR; rsbT co-antagonist protein RsbR
E HEP81_00794 DNA-binding protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E HEP81_01663 Stage II sporulation protein E (SpoIIE) K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E HEP81_03605 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E HEP81_04331 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E HEP81_04416 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E HEP81_07211 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E HEP81_00732 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
E HEP81_01672 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E HEP81_01664 STAS domain protein K04749 rsbV; anti-sigma B factor antagonist
E HEP81_03967 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E HEP81_01471 regulatory protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E HEP81_02779 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E HEP81_07639 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor
E HEP81_05694 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor
E HEP81_07319 greA_2; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
E HEP81_03019 greA_1; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E HEP81_06916 transcription termination factor Rho K03628 rho; transcription termination factor Rho
E HEP81_02690 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024