+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Sodalis glossinidius

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E SG1052 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] E SG0159 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] E SG1787 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E SG0343 ribonuclease R (RNase R) K12573 rnr; ribonuclease R [EC:3.1.13.1] E SG0314 putative oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E SG2388 ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] E SG0913 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E SG0383 inducible ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E SG2337 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E SG0513 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E SG0381 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E SG2386 transcription termination factor Rho K03628 rho; transcription termination factor Rho E SG2178 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E SG0409 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK E SG0306 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E SG0337 host factor-I protein (HF-I) K03666 hfq; host factor-I protein D Others E SG1736 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E SG0490 poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E SG1980 conserved hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] E SG0539 carbon storage regulator K03563 csrA; carbon storage regulator E SG0155 conserved hypothetical protein K18765 csrD; RNase E specificity factor CsrD E SG2170 menaquinone biosynthesis protein K02553 rraA; regulator of ribonuclease activity A E SG2112 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B E SG0196 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ E SG1491 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024