+D GENES KO #

  KEGG Orthology (KO) - Shewanella sp. H8

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:sheh00010] D ABIS04_04990 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ABIS04_02540 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ABIS04_15480 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ABIS04_14260 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ABIS04_09795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_09805 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_15485 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ABIS04_18850 gpmM; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ABIS04_07690 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_13955 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_10035 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ABIS04_10920 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D ABIS04_18135 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ABIS04_18130 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_19590 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ABIS04_09995 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D ABIS04_05505 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D ABIS04_11640 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ABIS04_17615 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ABIS04_09915 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ABIS04_10970 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D ABIS04_18365 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ABIS04_08300 crr; (GenBank) PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D ABIS04_12755 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:sheh00020] D ABIS04_11180 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ABIS04_10200 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D ABIS04_01010 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_18105 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_10765 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ABIS04_05600 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D ABIS04_11155 sucA; (GenBank) 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D ABIS04_11150 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_11140 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ABIS04_11145 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ABIS04_11165 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ABIS04_11160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ABIS04_11175 sdhC; (GenBank) succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ABIS04_11170 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ABIS04_02170 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02175 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02165 fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ABIS04_17690 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D ABIS04_08780 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D ABIS04_01005 lyase family protein K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ABIS04_03390 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ABIS04_18365 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ABIS04_18135 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ABIS04_18130 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:sheh00030] D ABIS04_04990 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ABIS04_10025 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ABIS04_10020 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D ABIS04_05820 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D ABIS04_01725 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ABIS04_15495 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ABIS04_04995 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D ABIS04_14890 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D ABIS04_05005 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D ABIS04_14175 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D ABIS04_17115 deoC; (GenBank) deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D ABIS04_18820 rbsK; (GenBank) ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D ABIS04_14165 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D ABIS04_09915 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ABIS04_03875 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ABIS04_10015 edd; (GenBank) phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D ABIS04_10010 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ABIS04_11105 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D ABIS04_11100 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D ABIS04_04000 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D ABIS04_15480 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ABIS04_02540 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:sheh00040] D ABIS04_04010 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D ABIS04_05365 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_12135 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_01725 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:sheh00051] D ABIS04_09970 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ABIS04_12485 mak; (GenBank) fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ABIS04_08765 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D ABIS04_05245 HAD-IIB family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D ABIS04_02540 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ABIS04_09975 mannitol dehydrogenase family protein K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D ABIS04_15480 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ABIS04_14260 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ABIS04_18110 hxpB; (GenBank) hexitol phosphatase HxpB K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] C 00052 Galactose metabolism [PATH:sheh00052] D ABIS04_17615 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ABIS04_17610 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D ABIS04_12455 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ABIS04_05365 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_12135 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_09915 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ABIS04_03620 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D ABIS04_08350 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ABIS04_08430 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ABIS04_03625 SIS domain-containing protein K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:sheh00500] D ABIS04_08350 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ABIS04_08430 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ABIS04_05255 sugar phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D ABIS04_05365 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_12135 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_12495 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12550 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12505 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ABIS04_08745 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D ABIS04_08750 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D ABIS04_08730 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D ABIS04_08740 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D ABIS04_08340 glucan 1,4-alpha-glucosidase K01178 SGA1; glucoamylase [EC:3.2.1.3] D ABIS04_08725 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D ABIS04_08300 crr; (GenBank) PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D ABIS04_08735 glgX; (GenBank) glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D ABIS04_09915 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ABIS04_04990 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ABIS04_09970 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ABIS04_12485 mak; (GenBank) fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:sheh00620] D ABIS04_11640 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ABIS04_18135 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ABIS04_18130 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_07040 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D ABIS04_09995 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D ABIS04_05505 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D ABIS04_19590 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ABIS04_07025 ackA; (GenBank) acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ABIS04_07020 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ABIS04_10035 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ABIS04_02480 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D ABIS04_05525 FAD-binding and (Fe-S)-binding domain-containing protein K18930 dld; D-lactate dehydrogenase D ABIS04_10405 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D ABIS04_10550 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D ABIS04_11960 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D ABIS04_14945 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D ABIS04_18045 malic enzyme-like NAD(P)-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D ABIS04_13855 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D ABIS04_13850 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D ABIS04_13860 OadG family transporter subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D ABIS04_03390 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ABIS04_08780 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D ABIS04_01005 lyase family protein K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ABIS04_02170 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02175 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02165 fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ABIS04_17690 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D ABIS04_00800 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ABIS04_18365 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ABIS04_10920 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D ABIS04_03550 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D ABIS04_13675 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_00525 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sheh00630] D ABIS04_03540 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D ABIS04_13670 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D ABIS04_03550 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D ABIS04_13675 aceB; (GenBank) malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D ABIS04_03390 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ABIS04_11180 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ABIS04_10200 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D ABIS04_01010 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_18105 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_11640 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_02745 katB; (GenBank) catalase KatB K03781 katE; catalase [EC:1.11.1.6] D ABIS04_04180 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D ABIS04_01730 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ABIS04_11540 HAD-IIIA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ABIS04_01950 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ABIS04_01455 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_04460 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_14050 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ABIS04_03480 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ABIS04_03470 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_03475 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D ABIS04_06360 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ABIS04_10010 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ABIS04_00300 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ABIS04_00345 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ABIS04_15130 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ABIS04_00305 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ABIS04_00350 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ABIS04_00310 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D ABIS04_00355 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D ABIS04_12750 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ABIS04_11485 C 00640 Propanoate metabolism [PATH:sheh00640] D ABIS04_11640 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ABIS04_05795 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D ABIS04_07025 ackA; (GenBank) acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ABIS04_07020 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ABIS04_09825 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ABIS04_09820 transketolase C-terminal domain-containing protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ABIS04_09815 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_07040 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D ABIS04_15220 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_04500 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ABIS04_04425 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ABIS04_11145 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ABIS04_11140 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ABIS04_04420 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ABIS04_12395 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ABIS04_10200 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D ABIS04_10195 acnD; (GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D ABIS04_10190 prpF; (GenBank) 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D ABIS04_01010 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_18105 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_10205 prpB; (GenBank) methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D ABIS04_03540 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D ABIS04_13670 aceA; (GenBank) isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D ABIS04_00375 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D ABIS04_05415 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:sheh00650] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_06590 fabV; (GenBank) enoyl-ACP reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D ABIS04_09995 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D ABIS04_13850 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D ABIS04_11165 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ABIS04_11160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ABIS04_11175 sdhC; (GenBank) succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ABIS04_11170 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ABIS04_02170 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02175 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02165 fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ABIS04_17690 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D ABIS04_04500 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ABIS04_04495 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_05425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_07040 pflB; (GenBank) formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D ABIS04_05765 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ABIS04_05760 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ABIS04_05755 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ABIS04_01930 ilvG; (GenBank) acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07895 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07890 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ABIS04_01935 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D ABIS04_01045 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00660 C5-Branched dibasic acid metabolism [PATH:sheh00660] D ABIS04_01930 ilvG; (GenBank) acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07895 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07890 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ABIS04_01935 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D ABIS04_11145 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ABIS04_11140 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ABIS04_00535 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ABIS04_00540 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ABIS04_00530 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:sheh00562] D ABIS04_07325 suhB; (GenBank) inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ABIS04_04420 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ABIS04_12395 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ABIS04_14260 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:sheh00190] D ABIS04_05110 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D ABIS04_11165 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ABIS04_11160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ABIS04_11175 sdhC; (GenBank) succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ABIS04_11170 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ABIS04_02170 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02175 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02165 fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ABIS04_15995 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D ABIS04_15990 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ABIS04_15985 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D ABIS04_00960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D ABIS04_01140 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D ABIS04_00965 cyoD; (GenBank) cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D ABIS04_01165 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D ABIS04_01175 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D ABIS04_01180 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D ABIS04_01170 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D ABIS04_01145 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ABIS04_09525 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ABIS04_09520 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D ABIS04_09515 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D ABIS04_09510 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D ABIS04_00970 cyoC; (GenBank) cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D ABIS04_00975 cyoB; (GenBank) cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D ABIS04_00980 cyoA; (GenBank) ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D ABIS04_13490 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D ABIS04_17105 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D ABIS04_13485 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D ABIS04_17100 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D ABIS04_13480 cydX; (GenBank) cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D ABIS04_04225 alternate F1F0 ATPase, F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ABIS04_19530 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ABIS04_04260 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ABIS04_19520 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ABIS04_04220 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ABIS04_19525 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ABIS04_19535 atpH; (GenBank) F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ABIS04_04255 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ABIS04_19515 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ABIS04_04240 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ABIS04_19550 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ABIS04_04230 F0F1 ATP synthase subunit delta K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ABIS04_19540 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ABIS04_04235 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ABIS04_19545 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ABIS04_17025 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:sheh00710] D ABIS04_15485 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ABIS04_09795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_09805 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_15480 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ABIS04_02540 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ABIS04_15495 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ABIS04_14890 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D ABIS04_15910 phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19] D ABIS04_14260 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ABIS04_01725 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ABIS04_04995 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D ABIS04_00800 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ABIS04_18365 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D ABIS04_18045 malic enzyme-like NAD(P)-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D ABIS04_03390 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:sheh00720] D ABIS04_10920 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D ABIS04_00800 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ABIS04_03390 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ABIS04_08780 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D ABIS04_01005 lyase family protein K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ABIS04_11165 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ABIS04_11160 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ABIS04_11175 sdhC; (GenBank) succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ABIS04_11170 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ABIS04_02170 fumarate reductase flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02175 fumarate reductase iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D ABIS04_02165 fumarate reductase cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C D ABIS04_17690 flavocytochrome c K26318 fccA; fumarate reductase (cytochrome) [EC:1.3.2.4] D ABIS04_11140 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ABIS04_11145 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_10765 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ABIS04_01010 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_18105 acnB; (GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D ABIS04_06530 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D ABIS04_16950 metF; (GenBank) methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D ABIS04_07020 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ABIS04_07025 ackA; (GenBank) acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ABIS04_11640 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:sheh00680] D ABIS04_19590 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ABIS04_19585 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D ABIS04_00300 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ABIS04_00345 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ABIS04_15130 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D ABIS04_00305 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ABIS04_00350 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D ABIS04_00310 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D ABIS04_00355 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D ABIS04_14050 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ABIS04_01950 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ABIS04_04180 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D ABIS04_07690 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_13955 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_00800 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ABIS04_03390 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ABIS04_15480 fba; (GenBank) class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ABIS04_02540 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ABIS04_07025 ackA; (GenBank) acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D ABIS04_07020 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ABIS04_11640 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ABIS04_10920 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D ABIS04_18850 gpmM; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ABIS04_02720 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ABIS04_08915 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ABIS04_14150 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:sheh00910] D ABIS04_11445 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D ABIS04_02695 napA; (GenBank) nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D ABIS04_06730 napA; (GenBank) nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D ABIS04_02680 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D ABIS04_06735 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D ABIS04_11475 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D ABIS04_11455 nirB; (GenBank) nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D ABIS04_11450 nirD; (GenBank) nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D ABIS04_04360 ammonia-forming cytochrome c nitrite reductase subunit c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D ABIS04_15620 nrfA; (GenBank) ammonia-forming nitrite reductase cytochrome c552 subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D ABIS04_15725 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D ABIS04_17295 hcp; (GenBank) hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D ABIS04_10585 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ABIS04_01455 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_04460 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_04740 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ABIS04_04735 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D ABIS04_08275 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:sheh00920] D ABIS04_03320 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ABIS04_03315 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ABIS04_03330 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D ABIS04_12490 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D ABIS04_18260 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D ABIS04_03295 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D ABIS04_03285 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D ABIS04_03290 cysI; (GenBank) assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D ABIS04_09690 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D ABIS04_16940 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D ABIS04_09645 phsA; (GenBank) thiosulfate reductase PhsA K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D ABIS04_04440 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ABIS04_19135 glpE; (GenBank) thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D ABIS04_07335 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ABIS04_07050 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D ABIS04_10095 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D ABIS04_12410 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D ABIS04_16975 metB; (GenBank) cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ABIS04_18925 hypothetical protein K28069 dddY; dimethylpropiothetin dethiomethylase [EC:4.4.1.3] D ABIS04_18935 flavocytochrome c K28483 ardA; acrylate reductase flavoprotein subunit [EC:1.3.-.-] D ABIS04_18930 cytochrome c3 family protein K28484 ardB; acrylate reductase cytochrome subunit [EC:1.3.-.-] D ABIS04_05735 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D ABIS04_09010 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D ABIS04_09370 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:sheh00061] D ABIS04_01575 acyl carrier protein K02078 acpP; acyl carrier protein D ABIS04_01580 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D ABIS04_11500 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein D ABIS04_11510 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ABIS04_07520 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ABIS04_11515 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ABIS04_01520 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ABIS04_12120 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ABIS04_01505 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ABIS04_11495 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ABIS04_01510 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_11505 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_12370 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_06260 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D ABIS04_12670 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ABIS04_06590 fabV; (GenBank) enoyl-ACP reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D ABIS04_01625 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_04055 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_07830 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_08150 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_09280 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_19260 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:sheh00071] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_00060 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_06140 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_09245 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ABIS04_10040 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D ABIS04_10140 fadE; (GenBank) acyl-CoA dehydrogenase FadE K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D ABIS04_01625 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_04055 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_07830 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_08150 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_09280 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_19260 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_19590 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ABIS04_09995 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D ABIS04_05505 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:sheh00074] D ABIS04_04870 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D ABIS04_01575 acyl carrier protein K02078 acpP; acyl carrier protein D ABIS04_01580 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D ABIS04_11500 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein D ABIS04_11510 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:sheh00561] D ABIS04_06360 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ABIS04_00550 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D ABIS04_01195 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D ABIS04_11520 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D ABIS04_04550 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ABIS04_16815 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ABIS04_01080 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D ABIS04_11585 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:sheh00564] D ABIS04_18865 gpsA; (GenBank) NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D ABIS04_01195 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D ABIS04_04550 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ABIS04_16815 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ABIS04_01080 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D ABIS04_11585 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D ABIS04_03305 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D ABIS04_00210 alpha/beta fold hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D ABIS04_16085 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D ABIS04_17045 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D ABIS04_12700 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D ABIS04_09890 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ABIS04_15370 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ABIS04_16070 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D ABIS04_06335 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D ABIS04_14010 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D ABIS04_07680 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:sheh00565] D ABIS04_03305 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism [PATH:sheh00590] D ABIS04_03305 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D ABIS04_05665 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] C 00591 Linoleic acid metabolism D ABIS04_03305 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:sheh00592] D ABIS04_03305 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D ABIS04_00060 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_06140 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:sheh01040] D ABIS04_18245 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D ABIS04_06675 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ABIS04_05830 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:sheh00230] D ABIS04_16125 nudF; (GenBank) ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D ABIS04_18265 nudE; (GenBank) ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D ABIS04_14165 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D ABIS04_09915 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ABIS04_03875 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ABIS04_12080 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ABIS04_02360 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D ABIS04_11760 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ABIS04_04190 purT; (GenBank) formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D ABIS04_13495 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D ABIS04_11755 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D ABIS04_13805 purK; (GenBank) 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D ABIS04_13800 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D ABIS04_17820 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D ABIS04_10790 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ABIS04_02365 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ABIS04_07425 apt; (GenBank) adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D ABIS04_13640 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D ABIS04_10975 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D ABIS04_13930 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ABIS04_07800 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D ABIS04_18290 yrfG; (GenBank) GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D ABIS04_07475 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D ABIS04_14160 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D ABIS04_01445 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ABIS04_15385 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ABIS04_02980 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D ABIS04_13515 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ABIS04_07380 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ABIS04_03370 yjjX; (GenBank) inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D ABIS04_05175 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D ABIS04_13510 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ABIS04_01645 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D ABIS04_08895 nrdA; (GenBank) class 1a ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ABIS04_08890 nrdB; (GenBank) class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D ABIS04_07255 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D ABIS04_09965 anti-phage deoxyguanosine triphosphatase K01129 dgt; dGTPase [EC:3.1.5.1] D ABIS04_09960 yfbR; (GenBank) 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D ABIS04_01635 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ABIS04_02195 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D ABIS04_13970 relA; (GenBank) GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D ABIS04_04760 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D ABIS04_02095 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D ABIS04_16505 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ABIS04_00220 add; (GenBank) adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D ABIS04_05620 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D ABIS04_07470 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ABIS04_13965 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ABIS04_16115 cpdA; (GenBank) 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D ABIS04_04135 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D ABIS04_03330 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D ABIS04_03320 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ABIS04_03315 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:sheh00240] D ABIS04_14310 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ABIS04_14315 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ABIS04_04605 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ABIS04_02870 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D ABIS04_08530 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D ABIS04_10580 pyrD; (GenBank) quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D ABIS04_00460 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D ABIS04_08975 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D ABIS04_12715 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D ABIS04_07380 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ABIS04_13965 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ABIS04_17935 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D ABIS04_07235 YgjP-like metallopeptidase domain-containing protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D ABIS04_13960 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D ABIS04_08950 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D ABIS04_10700 udk; (GenBank) uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D ABIS04_13640 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D ABIS04_10975 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D ABIS04_13930 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ABIS04_07800 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D ABIS04_01660 yjjG; (GenBank) pyrimidine 5'-nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D ABIS04_16725 udp; (GenBank) uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D ABIS04_01445 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ABIS04_11750 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D ABIS04_18825 rihA; (GenBank) pyrimidine-specific ribonucleoside hydrolase RihA K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D ABIS04_05620 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D ABIS04_07940 cdd; (GenBank) cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D ABIS04_07255 nrdD; (GenBank) anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D ABIS04_10695 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D ABIS04_08895 nrdA; (GenBank) class 1a ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ABIS04_08890 nrdB; (GenBank) class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D ABIS04_09960 yfbR; (GenBank) 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D ABIS04_17075 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D ABIS04_10680 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D ABIS04_00475 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D ABIS04_14170 deoA; (GenBank) thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D ABIS04_05730 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D ABIS04_04785 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:sheh00250] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_04815 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D ABIS04_08830 ansA; (GenBank) asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D ABIS04_11790 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D ABIS04_07785 asnB; (GenBank) asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D ABIS04_09955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ABIS04_01950 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ABIS04_08445 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D ABIS04_00825 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ABIS04_00830 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ABIS04_16505 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ABIS04_10790 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ABIS04_04605 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ABIS04_04500 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ABIS04_04495 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_05425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_04740 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ABIS04_04735 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D ABIS04_10585 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ABIS04_02770 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ABIS04_01455 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_04460 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_14310 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ABIS04_14315 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ABIS04_05150 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D ABIS04_19500 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ABIS04_12080 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:sheh00260] D ABIS04_02560 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D ABIS04_04965 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D ABIS04_16970 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D ABIS04_12110 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ABIS04_04970 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D ABIS04_04975 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D ABIS04_05490 ltaE; (GenBank) low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D ABIS04_14050 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ABIS04_01950 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ABIS04_04180 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D ABIS04_06360 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ABIS04_18850 gpmM; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D ABIS04_02720 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ABIS04_08915 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ABIS04_14150 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D ABIS04_19125 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D ABIS04_19130 tdh; (GenBank) L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D ABIS04_03480 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ABIS04_03470 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_03475 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D ABIS04_09890 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ABIS04_15370 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D ABIS04_09760 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D ABIS04_09755 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D ABIS04_11290 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ABIS04_01945 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ABIS04_11900 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ABIS04_11895 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:sheh00270] D ABIS04_07335 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ABIS04_07050 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D ABIS04_10095 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47] D ABIS04_07855 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ABIS04_14810 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ABIS04_14970 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ABIS04_15500 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ABIS04_07990 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D ABIS04_15775 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D ABIS04_04670 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D ABIS04_15385 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ABIS04_19230 mtnC; (GenBank) acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D ABIS04_09450 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D ABIS04_12245 megL; (GenBank) methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D ABIS04_10630 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D ABIS04_14435 luxS; (GenBank) S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D ABIS04_02560 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D ABIS04_04965 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D ABIS04_16970 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D ABIS04_12110 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ABIS04_04970 thrB; (GenBank) homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D ABIS04_12410 metA; (GenBank) homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D ABIS04_16975 metB; (GenBank) cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ABIS04_03420 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D ABIS04_01890 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ABIS04_13825 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D ABIS04_02595 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_04440 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ABIS04_03390 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ABIS04_11290 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ABIS04_02720 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ABIS04_08915 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:sheh00280] D ABIS04_01890 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ABIS04_10805 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D ABIS04_09825 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ABIS04_09820 transketolase C-terminal domain-containing protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ABIS04_09815 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_09245 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D ABIS04_05785 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_00060 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_06140 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_12375 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D ABIS04_04420 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ABIS04_12395 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ABIS04_04425 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ABIS04_04500 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ABIS04_05770 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D ABIS04_05780 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D ABIS04_05775 enoyl-CoA hydratase-related protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D ABIS04_05765 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ABIS04_05760 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ABIS04_05755 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sheh00290] D ABIS04_01945 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ABIS04_00535 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ABIS04_00540 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ABIS04_00530 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D ABIS04_01930 ilvG; (GenBank) acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07895 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07890 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ABIS04_01935 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D ABIS04_01925 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ABIS04_01940 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ABIS04_01890 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ABIS04_10805 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D ABIS04_09955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ABIS04_00525 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:sheh00300] D ABIS04_02560 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D ABIS04_04965 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D ABIS04_16970 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D ABIS04_12110 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ABIS04_10170 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ABIS04_14320 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D ABIS04_12740 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D ABIS04_15955 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ABIS04_08290 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ABIS04_02115 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D ABIS04_02110 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D ABIS04_00580 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ABIS04_00585 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:sheh00310] D ABIS04_11150 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_04500 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ABIS04_04495 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_05425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:sheh00220] D ABIS04_00820 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D ABIS04_00825 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ABIS04_00830 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ABIS04_05150 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D ABIS04_01455 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_04460 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_14310 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ABIS04_14315 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ABIS04_10585 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_09955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ABIS04_00500 argA; (GenBank) amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D ABIS04_00815 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D ABIS04_00810 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D ABIS04_15955 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ABIS04_00805 argE; (GenBank) acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:sheh00330] D ABIS04_07985 speA; (GenBank) biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D ABIS04_07820 aguA; (GenBank) agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D ABIS04_16730 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D ABIS04_15775 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D ABIS04_07990 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D ABIS04_04465 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D ABIS04_07825 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ABIS04_15950 astA; (GenBank) arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D ABIS04_07010 astB; (GenBank) N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D ABIS04_15945 astD; (GenBank) succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D ABIS04_09830 astE; (GenBank) succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D ABIS04_04445 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D ABIS04_04490 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D ABIS04_04430 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D ABIS04_05195 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D ABIS04_02770 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ABIS04_14355 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ABIS04_15240 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ABIS04_14350 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D ABIS04_15245 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:sheh00340] D ABIS04_08080 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D ABIS04_08045 hisIE; (GenBank) bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D ABIS04_08055 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D ABIS04_08060 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D ABIS04_08050 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D ABIS04_08065 hisB; (GenBank) bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D ABIS04_08070 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ABIS04_08075 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D ABIS04_01550 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D ABIS04_19190 hutI; (GenBank) imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] C 00350 Tyrosine metabolism [PATH:sheh00350] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_08070 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ABIS04_09450 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D ABIS04_11060 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D ABIS04_11055 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D ABIS04_12430 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D ABIS04_12435 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D ABIS04_19590 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ABIS04_09995 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D ABIS04_05505 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D ABIS04_04495 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_05425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:sheh00360] D ABIS04_12450 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_08070 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ABIS04_09450 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D ABIS04_11060 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D ABIS04_09910 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D ABIS04_07825 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:sheh00380] D ABIS04_11150 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_07825 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ABIS04_02745 katB; (GenBank) catalase KatB K03781 katE; catalase [EC:1.11.1.6] D ABIS04_09910 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sheh00400] D ABIS04_04915 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ABIS04_10930 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ABIS04_15590 aroG; (GenBank) 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ABIS04_01700 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D ABIS04_17215 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D ABIS04_00170 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D ABIS04_01695 aroK; (GenBank) shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D ABIS04_08945 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D ABIS04_06180 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D ABIS04_11875 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ABIS04_11880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D ABIS04_11885 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D ABIS04_11890 trpCF; (GenBank) bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D ABIS04_11900 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ABIS04_11895 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ABIS04_04920 tyrA; (GenBank) bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D ABIS04_04930 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_08070 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ABIS04_09450 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D ABIS04_12450 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:sheh00410] D ABIS04_04500 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ABIS04_15865 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D ABIS04_04425 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_04420 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ABIS04_12395 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:sheh00430] D ABIS04_11075 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ABIS04_08445 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D ABIS04_10585 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ABIS04_07020 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ABIS04_07025 ackA; (GenBank) acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:sheh00450] D ABIS04_16975 metB; (GenBank) cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ABIS04_07855 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D ABIS04_14810 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ABIS04_14970 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ABIS04_12245 megL; (GenBank) methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D ABIS04_03350 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D ABIS04_09840 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ABIS04_03320 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ABIS04_03315 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ABIS04_18250 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D ABIS04_10710 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:sheh00460] D ABIS04_12495 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12550 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12505 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ABIS04_11075 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ABIS04_08830 ansA; (GenBank) asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D ABIS04_11790 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D ABIS04_14050 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:sheh00470] D ABIS04_16445 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D ABIS04_06745 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ABIS04_05150 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D ABIS04_18230 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D ABIS04_00595 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ABIS04_02115 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D ABIS04_02110 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:sheh00480] D ABIS04_11075 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ABIS04_13825 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D ABIS04_02595 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D ABIS04_14365 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ABIS04_14550 pepA; (GenBank) leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ABIS04_15830 pepB; (GenBank) aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D ABIS04_10615 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ABIS04_15680 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ABIS04_14370 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D ABIS04_09570 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ABIS04_14920 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ABIS04_15060 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ABIS04_19430 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D ABIS04_10765 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ABIS04_05820 gndA; (GenBank) NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D ABIS04_10025 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ABIS04_05220 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D ABIS04_05670 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D ABIS04_00940 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D ABIS04_16730 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D ABIS04_15775 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D ABIS04_05640 B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sheh00520] D ABIS04_04635 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D ABIS04_08300 crr; (GenBank) PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D ABIS04_08900 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D ABIS04_04165 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D ABIS04_04170 murU; (GenBank) N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D ABIS04_19510 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ABIS04_16540 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ABIS04_18705 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ABIS04_05290 NAD-dependent epimerase/dehydratase family protein K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45] D ABIS04_11285 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ABIS04_05370 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D ABIS04_14265 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D ABIS04_19500 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ABIS04_09970 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ABIS04_12485 mak; (GenBank) fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ABIS04_04990 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ABIS04_12755 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D ABIS04_09915 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ABIS04_05365 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_12135 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_17610 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D ABIS04_12455 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ABIS04_08765 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D ABIS04_08745 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D ABIS04_05335 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:sheh00541] D ABIS04_19510 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ABIS04_05290 NAD-dependent epimerase/dehydratase family protein K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45] D ABIS04_05285 tviB; (GenBank) Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D ABIS04_16580 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D ABIS04_03920 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D ABIS04_16585 kdsC; (GenBank) 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D ABIS04_08260 kdsB; (GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D ABIS04_01745 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ABIS04_07530 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D ABIS04_03250 hldE; (GenBank) bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ABIS04_19080 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D ABIS04_05365 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_12135 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ABIS04_05335 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ABIS04_05330 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ABIS04_05345 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ABIS04_05380 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ABIS04_05340 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D ABIS04_05375 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:sheh00540] D ABIS04_12665 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ABIS04_00630 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D ABIS04_12675 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D ABIS04_06515 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D ABIS04_12660 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D ABIS04_11215 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D ABIS04_19115 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ABIS04_03245 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D ABIS04_08040 lpxM; (GenBank) lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D ABIS04_01075 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D ABIS04_19110 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] C 00542 O-Antigen repeat unit biosynthesis [PATH:sheh00542] D ABIS04_05355 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_05360 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00550 Peptidoglycan biosynthesis [PATH:sheh00550] D ABIS04_16540 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ABIS04_18705 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ABIS04_00610 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ABIS04_00595 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ABIS04_00580 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ABIS04_06745 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ABIS04_00585 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ABIS04_12705 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ABIS04_04565 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ABIS04_02265 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D ABIS04_00590 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ABIS04_00605 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ABIS04_17055 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_01665 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ABIS04_15805 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D ABIS04_00600 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_03745 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_03750 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ABIS04_00575 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ABIS04_03730 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ABIS04_09895 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:sheh00552] D ABIS04_04565 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ABIS04_02265 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D ABIS04_05355 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_05360 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D ABIS04_05355 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_05360 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:sheh00543] D ABIS04_12170 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D ABIS04_05355 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_05360 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_07335 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ABIS04_12210 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D ABIS04_12205 glycosyltransferase family 2 protein K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-] D ABIS04_12175 glycosyltransferase family 2 protein K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-] D ABIS04_12200 glycosyltransferase family 2 protein K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-] D ABIS04_12180 D ABIS04_12185 B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:sheh00730] D ABIS04_10515 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D ABIS04_10510 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D ABIS04_10505 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D ABIS04_07345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ABIS04_05570 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D ABIS04_10490 thiH; (GenBank) 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D ABIS04_05545 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ABIS04_10495 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D ABIS04_14015 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D ABIS04_16065 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D ABIS04_02590 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06790 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06795 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_07470 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:sheh00740] D ABIS04_07275 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ABIS04_14030 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D ABIS04_14040 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ABIS04_02130 HAD-IA family hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D ABIS04_19375 ribB; (GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D ABIS04_14025 ribE; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D ABIS04_09420 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D ABIS04_14035 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D ABIS04_05040 ribF; (GenBank) bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D ABIS04_16670 fre; (GenBank) NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D ABIS04_16125 nudF; (GenBank) ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D ABIS04_10775 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D ABIS04_02975 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:sheh00750] D ABIS04_08000 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D ABIS04_15490 epd; (GenBank) erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D ABIS04_12115 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D ABIS04_08915 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ABIS04_04150 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D ABIS04_04865 pdxJ; (GenBank) pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D ABIS04_04975 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:sheh00760] D ABIS04_04815 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D ABIS04_09810 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D ABIS04_18155 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D ABIS04_14160 deoD; (GenBank) purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D ABIS04_13640 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D ABIS04_10975 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D ABIS04_13930 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D ABIS04_07800 HAD-IIA family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D ABIS04_03765 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D ABIS04_13965 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ABIS04_07480 nadE; (GenBank) ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D ABIS04_11125 cobB; (GenBank) Sir2 family NAD+-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D ABIS04_05535 nadK; (GenBank) NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D ABIS04_03280 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D ABIS04_03275 pntB; (GenBank) Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D ABIS04_04495 gabD; (GenBank) NADP-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_05425 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ABIS04_00770 C 00770 Pantothenate and CoA biosynthesis [PATH:sheh00770] D ABIS04_01930 ilvG; (GenBank) acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07895 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ABIS04_07890 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ABIS04_01935 ilvM; (GenBank) acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D ABIS04_01925 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ABIS04_01940 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ABIS04_15860 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D ABIS04_03930 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D ABIS04_15090 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D ABIS04_15865 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D ABIS04_18695 coaA; (GenBank) type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D ABIS04_00480 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D ABIS04_13965 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D ABIS04_19065 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D ABIS04_18180 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D ABIS04_04870 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D ABIS04_12850 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D ABIS04_05995 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D ABIS04_01890 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ABIS04_06355 panP; (GenBank) pyridoxal-dependent aspartate 1-decarboxylase PanP K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:sheh00780] D ABIS04_11615 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D ABIS04_01520 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ABIS04_12120 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ABIS04_01505 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ABIS04_11495 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ABIS04_01510 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_11505 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_12370 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_12670 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ABIS04_01105 bioH; (GenBank) pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D ABIS04_11620 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D ABIS04_11630 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D ABIS04_11610 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D ABIS04_11625 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D ABIS04_18700 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:sheh00785] D ABIS04_03720 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D ABIS04_03715 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_18135 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ABIS04_18130 aceF; (GenBank) pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ABIS04_11155 sucA; (GenBank) 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D ABIS04_11150 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D ABIS04_09825 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ABIS04_09820 transketolase C-terminal domain-containing protein K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ABIS04_09815 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ABIS04_03480 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ABIS04_03470 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ABIS04_03475 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:sheh00790] D ABIS04_00465 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D ABIS04_03410 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D ABIS04_02590 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06790 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06795 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_04555 folB; (GenBank) dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D ABIS04_04560 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D ABIS04_15855 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D ABIS04_14270 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D ABIS04_04120 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D ABIS04_12095 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D ABIS04_07275 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ABIS04_14030 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D ABIS04_15970 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D ABIS04_08775 pabB; (GenBank) aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D ABIS04_10690 pabC; (GenBank) aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D ABIS04_03405 folX; (GenBank) dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D ABIS04_06705 folX; (GenBank) dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D ABIS04_03415 folM; (GenBank) dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D ABIS04_12445 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D ABIS04_12450 phhA; (GenBank) phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D ABIS04_10100 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D ABIS04_10105 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D ABIS04_12830 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D ABIS04_18455 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ABIS04_19045 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ABIS04_18450 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ABIS04_18440 moaE; (GenBank) molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ABIS04_19300 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D ABIS04_18385 glp; (GenBank) gephyrin-like molybdotransferase Glp K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ABIS04_19040 bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ABIS04_11950 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D ABIS04_19035 mobA; (GenBank) molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:sheh00670] D ABIS04_04120 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D ABIS04_03415 folM; (GenBank) dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D ABIS04_06530 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D ABIS04_14050 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ABIS04_11760 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ABIS04_02365 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ABIS04_03470 gcvT; (GenBank) glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ABIS04_14810 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D ABIS04_04785 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D ABIS04_12750 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ABIS04_16950 metF; (GenBank) methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D ABIS04_03425 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D ABIS04_15500 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ABIS04_03480 gcvP; (GenBank) aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_03475 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D ABIS04_09760 betA; (GenBank) choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D ABIS04_09755 betB; (GenBank) betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:sheh00860] D ABIS04_05910 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ABIS04_03890 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D ABIS04_04600 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ABIS04_02205 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ABIS04_02090 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D ABIS04_02085 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D ABIS04_02280 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D ABIS04_00150 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D ABIS04_00225 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D ABIS04_00085 hemG; (GenBank) menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D ABIS04_00095 hemG; (GenBank) menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D ABIS04_15025 hemG; (GenBank) menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D ABIS04_05225 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D ABIS04_02080 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D ABIS04_03310 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D ABIS04_11470 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D ABIS04_06050 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D ABIS04_00960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D ABIS04_01140 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D ABIS04_01145 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ABIS04_14770 cobO; (GenBank) cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D ABIS04_14775 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D ABIS04_04665 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D ABIS04_14780 cobU; (GenBank) bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D ABIS04_14785 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D ABIS04_14790 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D ABIS04_14805 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D ABIS04_14380 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D ABIS04_14385 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sheh00130] D ABIS04_00255 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D ABIS04_16690 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D ABIS04_16665 ubiD; (GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D ABIS04_02975 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D ABIS04_03465 FAD-dependent oxidoreductase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D ABIS04_14115 peptidase U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D ABIS04_14120 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D ABIS04_14110 SCP2 sterol-binding domain-containing protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT D ABIS04_08905 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D ABIS04_03460 ubiH; (GenBank) 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D ABIS04_02250 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D ABIS04_03820 FAD-dependent monooxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D ABIS04_19000 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D ABIS04_01280 menD; (GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D ABIS04_01275 menH; (GenBank) 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D ABIS04_01270 menC; (GenBank) o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D ABIS04_01265 menE; (GenBank) o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D ABIS04_19475 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D ABIS04_02735 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D ABIS04_05825 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D ABIS04_11060 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:sheh00900] D ABIS04_05545 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ABIS04_12695 ispC; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D ABIS04_13945 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D ABIS04_03880 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D ABIS04_13940 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D ABIS04_13620 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D ABIS04_05060 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_02975 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D ABIS04_05550 ispA; (GenBank) (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D ABIS04_04090 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D ABIS04_12705 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:sheh00907] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_05765 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ABIS04_00060 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_06140 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D ABIS04_15495 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:sheh00523] D ABIS04_05335 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ABIS04_05330 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ABIS04_05345 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ABIS04_05380 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ABIS04_05340 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D ABIS04_05375 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D ABIS04_19000 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D ABIS04_05330 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:sheh00946] D ABIS04_12495 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12550 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12505 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:sheh00332] D ABIS04_14355 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ABIS04_15240 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ABIS04_14350 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D ABIS04_15245 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:sheh00261] D ABIS04_03320 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ABIS04_03315 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ABIS04_02560 lysC; (GenBank) lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D ABIS04_04965 thrA; (GenBank) bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D ABIS04_16970 bifunctional aspartate kinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D ABIS04_12110 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ABIS04_10170 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ABIS04_14320 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:sheh00521] D ABIS04_09915 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ABIS04_07325 suhB; (GenBank) inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ABIS04_05335 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ABIS04_05330 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ABIS04_05345 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ABIS04_05380 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D ABIS04_05340 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D ABIS04_05375 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:sheh00525] D ABIS04_05335 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ABIS04_05330 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:sheh00401] D ABIS04_04920 tyrA; (GenBank) bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_08070 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ABIS04_09450 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis D ABIS04_08420 tryptophan halogenase family protein K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D ABIS04_12525 tryptophan halogenase family protein K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D ABIS04_12540 tryptophan halogenase family protein K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D ABIS04_11875 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ABIS04_11880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D ABIS04_11510 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ABIS04_01510 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_11505 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_12370 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D ABIS04_01575 acyl carrier protein K02078 acpP; acyl carrier protein D ABIS04_01580 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D ABIS04_11500 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:sheh00999] D ABIS04_15500 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ABIS04_00170 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D ABIS04_12495 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12550 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ABIS04_12505 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:sheh00362] D ABIS04_00060 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_06140 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_19405 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D ABIS04_07370 fdx; (GenBank) ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_13850 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:sheh00627] D ABIS04_07825 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ABIS04_02975 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:sheh00364] D ABIS04_02485 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D ABIS04_09220 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:sheh00625] D ABIS04_09305 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D ABIS04_12065 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D ABIS04_05505 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D ABIS04_19590 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ABIS04_09995 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D ABIS04_08850 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D ABIS04_19195 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sheh00361] D ABIS04_09305 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D ABIS04_12065 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D ABIS04_02485 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D ABIS04_09220 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D ABIS04_08850 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D ABIS04_19195 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:sheh00623] D ABIS04_02485 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D ABIS04_09220 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:sheh00633] D ABIS04_13740 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D ABIS04_00060 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_06140 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:sheh00643] D ABIS04_11055 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D ABIS04_12430 maiA; (GenBank) maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D ABIS04_12435 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D ABIS04_07825 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:sheh00930] D ABIS04_00065 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D ABIS04_06145 fadJ; (GenBank) fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:sheh00626] D ABIS04_05505 yiaY; (GenBank) L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D ABIS04_19590 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D ABIS04_09995 adhE; (GenBank) bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:sheh00984] D ABIS04_00060 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_06140 fadI; (GenBank) acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:sheh03020] D ABIS04_18635 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ABIS04_18630 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ABIS04_18475 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ABIS04_01640 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:sheh03010] D ABIS04_00185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00745 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_07535 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_14840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_15365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_18220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_19460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_07550 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_14835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_15360 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_18205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_19455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00195 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00670 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00680 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_07555 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_14830 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_15355 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_18200 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_19450 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_08955 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ABIS04_12725 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ABIS04_18570 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ABIS04_18480 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ABIS04_18515 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ABIS04_16475 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ABIS04_18620 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ABIS04_18530 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ABIS04_16515 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ABIS04_18605 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ABIS04_18485 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ABIS04_18625 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ABIS04_18490 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ABIS04_18535 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ABIS04_14215 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ABIS04_04895 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ABIS04_18555 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ABIS04_16465 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ABIS04_18580 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ABIS04_05030 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ABIS04_04540 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D ABIS04_18650 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ABIS04_18585 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ABIS04_18600 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D ABIS04_18595 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ABIS04_18540 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ABIS04_18525 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ABIS04_16460 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D ABIS04_18645 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ABIS04_18655 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ABIS04_18640 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ABIS04_16520 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ABIS04_18550 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ABIS04_18505 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ABIS04_18565 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ABIS04_18470 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ABIS04_18520 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ABIS04_04910 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ABIS04_09445 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ABIS04_04095 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D ABIS04_18575 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ABIS04_18590 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ABIS04_18545 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ABIS04_11805 rplY; (GenBank) 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ABIS04_04100 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ABIS04_00490 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ABIS04_18560 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ABIS04_18510 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D ABIS04_18050 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D ABIS04_11525 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ABIS04_00495 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ABIS04_19625 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D ABIS04_09440 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ABIS04_18495 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:sheh00970] D ABIS04_00660 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_05870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_05905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_07545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_18210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_01970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_06540 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_10340 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10345 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10350 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10360 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_00200 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ABIS04_00760 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ABIS04_10525 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ABIS04_06345 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ABIS04_09785 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ABIS04_03845 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ABIS04_03850 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ABIS04_03865 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ABIS04_05875 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05885 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05900 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_06340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_09790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_16045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_16050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_16055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_18680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_01975 tRNA-His K14226 tRNA-His; tRNA His D ABIS04_06545 tRNA-His K14226 tRNA-His; tRNA His D ABIS04_00655 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ABIS04_07540 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ABIS04_18215 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ABIS04_02440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_03840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_03860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_06350 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_09780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_11825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_14250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_15405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_11665 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11675 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11690 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_03835 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_03855 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_04520 tRNA-Ile K14230 tRNA-Met; tRNA Met D ABIS04_06210 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06215 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06220 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06225 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06230 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_14245 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_05125 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ABIS04_15400 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ABIS04_01980 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_01985 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_06535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_06945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_06270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_08510 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_08795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_13870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_13890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_17315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_00675 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_05120 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_18675 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_18690 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_15335 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ABIS04_10080 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_10085 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_10090 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_18685 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_05915 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05920 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05925 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05930 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05935 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05940 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_09405 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_09410 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05910 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ABIS04_06500 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D ABIS04_13900 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ABIS04_10430 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ABIS04_08710 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D ABIS04_00035 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ABIS04_00030 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ABIS04_09430 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ABIS04_08475 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ABIS04_06525 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ABIS04_10710 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ABIS04_00115 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D ABIS04_14590 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ABIS04_03780 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ABIS04_05045 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ABIS04_02845 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ABIS04_18070 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ABIS04_05690 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ABIS04_13615 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ABIS04_08025 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ABIS04_08030 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ABIS04_04645 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ABIS04_01735 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:sheh03008] D ABIS04_04850 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D ABIS04_16060 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D ABIS04_08865 PA4780 family RIO1-like protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:sheh03060] D ABIS04_18500 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ABIS04_18665 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ABIS04_14255 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D ABIS04_06020 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ABIS04_14295 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ABIS04_06025 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ABIS04_14290 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ABIS04_06015 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ABIS04_19610 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ABIS04_00645 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ABIS04_18860 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D ABIS04_04890 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ABIS04_06390 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA D ABIS04_01245 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D ABIS04_02235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D ABIS04_02230 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D ABIS04_02225 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D ABIS04_04845 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ABIS04_05050 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D ABIS04_06815 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum [PATH:sheh04141] D ABIS04_07460 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D ABIS04_08700 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:sheh04122] D ABIS04_07345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ABIS04_04440 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ABIS04_00055 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ABIS04_08245 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ABIS04_08485 tusB; (GenBank) sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D ABIS04_08490 tusC; (GenBank) sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D ABIS04_08495 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D ABIS04_08480 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D ABIS04_10780 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ABIS04_18440 moaE; (GenBank) molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ABIS04_18455 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ABIS04_19045 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ABIS04_18445 moaD; (GenBank) molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D ABIS04_18390 moeB; (GenBank) molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D ABIS04_18450 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ABIS04_19300 mog; (GenBank) molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D ABIS04_05570 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D ABIS04_10500 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D ABIS04_10505 HesA/MoeB/ThiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:sheh03018] D ABIS04_04770 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D ABIS04_11550 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D ABIS04_02190 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D ABIS04_07690 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_13955 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_14205 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ABIS04_02910 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_03180 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_04200 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_05515 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_05965 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_08800 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_16495 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ABIS04_17805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ABIS04_00515 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ABIS04_09875 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ABIS04_02180 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho D ABIS04_14345 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D ABIS04_17570 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ABIS04_16015 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D ABIS04_15850 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:sheh03030] D ABIS04_07515 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_08685 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_10535 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_19600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_12650 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ABIS04_07430 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ABIS04_10675 holB; (GenBank) DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ABIS04_03770 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ABIS04_14585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ABIS04_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ABIS04_16450 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ABIS04_04530 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ABIS04_17785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ABIS04_03380 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ABIS04_10540 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ABIS04_12655 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ABIS04_19150 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ABIS04_07080 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:sheh03410] D ABIS04_10400 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ABIS04_04085 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ABIS04_05135 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D ABIS04_19055 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ABIS04_05955 AlkA N-terminal domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ABIS04_00040 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D ABIS04_11915 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D ABIS04_19150 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ABIS04_15410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ABIS04_07080 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:sheh03420] D ABIS04_11275 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ABIS04_17795 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D ABIS04_10335 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D ABIS04_06330 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D ABIS04_16695 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ABIS04_19150 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ABIS04_07080 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:sheh03430] D ABIS04_13910 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D ABIS04_16025 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D ABIS04_04765 mutH; (GenBank) DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D ABIS04_16695 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ABIS04_07945 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D ABIS04_13520 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ABIS04_05555 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ABIS04_15410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ABIS04_17785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ABIS04_12650 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ABIS04_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ABIS04_07430 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ABIS04_03770 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ABIS04_10675 holB; (GenBank) DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ABIS04_07515 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_08685 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_10535 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_19600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_14585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ABIS04_07080 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ABIS04_01710 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:sheh03440] D ABIS04_15410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ABIS04_17785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ABIS04_00015 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D ABIS04_04860 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D ABIS04_07455 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR D ABIS04_13905 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA D ABIS04_19150 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ABIS04_10415 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ABIS04_10410 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ABIS04_10420 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ABIS04_01600 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D ABIS04_06845 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D ABIS04_06850 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D ABIS04_06840 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D ABIS04_12650 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ABIS04_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ABIS04_07430 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ABIS04_03770 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ABIS04_10675 holB; (GenBank) DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ABIS04_07515 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_08685 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_10535 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_19600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_14585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ABIS04_18065 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D ABIS04_16470 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N D ABIS04_06410 primosomal replication protein K04067 priC; primosomal replication protein N'' C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:sheh03250] D ABIS04_03975 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses D ABIS04_02545 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:sheh02010] D ABIS04_19020 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D ABIS04_19025 ABC transporter permease K05773 tupB; tungstate transport system permease protein D ABIS04_19030 energy-coupling factor ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D ABIS04_15635 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ABIS04_18435 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ABIS04_18430 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D ABIS04_18425 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ABIS04_11980 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein D ABIS04_15550 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D ABIS04_15545 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D ABIS04_15540 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ABIS04_04470 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D ABIS04_04485 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D ABIS04_04480 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D ABIS04_04475 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D ABIS04_03035 proX; (GenBank) glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D ABIS04_03040 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D ABIS04_03045 proV; (GenBank) glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ABIS04_16555 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D ABIS04_17745 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D ABIS04_09730 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ABIS04_16560 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ABIS04_17750 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ABIS04_09720 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ABIS04_16565 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ABIS04_17755 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ABIS04_16550 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D ABIS04_09725 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ABIS04_16570 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ABIS04_17760 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ABIS04_01320 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D ABIS04_05660 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D ABIS04_12310 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D ABIS04_12305 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D ABIS04_12300 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ABIS04_06980 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D ABIS04_06990 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D ABIS04_06985 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ABIS04_06615 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D ABIS04_06610 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D ABIS04_06605 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D ABIS04_06600 oligopeptide/dipeptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D ABIS04_06595 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D ABIS04_14715 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D ABIS04_08600 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein D ABIS04_19290 ABC transporter permease K09696 natB; sodium transport system permease protein D ABIS04_19285 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D ABIS04_11255 lolE; (GenBank) lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D ABIS04_11265 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein D ABIS04_11260 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ABIS04_00695 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D D ABIS04_00700 ccmC; (GenBank) heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D ABIS04_00705 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B D ABIS04_00710 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D ABIS04_14545 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D ABIS04_14540 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D ABIS04_16600 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D ABIS04_01255 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ABIS04_01250 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ABIS04_11220 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D ABIS04_15580 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D ABIS04_05950 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D ABIS04_02015 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ABIS04_03195 cydC; (GenBank) cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D ABIS04_03190 cydD; (GenBank) cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D ABIS04_09110 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) [PATH:sheh02060] D ABIS04_08305 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D ABIS04_08310 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D ABIS04_08300 crr; (GenBank) PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D ABIS04_12755 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D ABIS04_04775 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D ABIS04_16625 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D ABIS04_16615 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:sheh03070] D ABIS04_16130 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein D ABIS04_17910 TolC family protein K12340 tolC; outer membrane protein D ABIS04_18345 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D ABIS04_18350 gspC; (GenBank) type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D ABIS04_18335 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D ABIS04_18330 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D ABIS04_18325 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H D ABIS04_18320 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D ABIS04_18315 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D ABIS04_18310 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D ABIS04_18305 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D ABIS04_18300 type II secretion system protein M K02462 gspM; general secretion pathway protein M D ABIS04_18340 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D ABIS04_06020 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ABIS04_14295 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ABIS04_06025 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ABIS04_14290 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ABIS04_18665 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ABIS04_14255 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D ABIS04_18500 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ABIS04_06015 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ABIS04_19610 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ABIS04_00645 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ABIS04_01245 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D ABIS04_18860 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D ABIS04_04890 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ABIS04_02235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D ABIS04_02230 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D ABIS04_02225 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:sheh02020] D ABIS04_05655 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ABIS04_05650 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D ABIS04_02590 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06790 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06795 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_01320 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D ABIS04_05660 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D ABIS04_13545 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D ABIS04_13540 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D ABIS04_00945 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D ABIS04_00950 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D ABIS04_17270 porin K09476 ompF; outer membrane pore protein F D ABIS04_01405 ATP-binding protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D ABIS04_01410 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D ABIS04_07630 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D ABIS04_07635 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D ABIS04_01215 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D ABIS04_01210 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D ABIS04_13555 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D ABIS04_13560 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D ABIS04_13090 flagellin K02406 fliC; flagellin D ABIS04_13095 flagellin K02406 fliC; flagellin D ABIS04_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D ABIS04_05560 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D ABIS04_02550 arcA; (GenBank) two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D ABIS04_01145 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ABIS04_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ABIS04_17715 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D ABIS04_00445 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D ABIS04_14945 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D ABIS04_19285 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D ABIS04_19290 ABC transporter permease K09696 natB; sodium transport system permease protein D ABIS04_07300 sensor histidine kinase K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D ABIS04_07295 btsR; (GenBank) two-component system response regulator BtsR K27883 btsR; two-component system, LytTR family, low-concentration pyruvate response regulator D ABIS04_15625 narQ; (GenBank) nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D ABIS04_15630 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D ABIS04_05705 rcsF; (GenBank) Rcs stress response system protein RcsF K06080 rcsF; RcsF protein D ABIS04_13980 barA; (GenBank) two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D ABIS04_06325 uvrY; (GenBank) UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D ABIS04_13895 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator D ABIS04_01610 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D ABIS04_01605 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D ABIS04_12735 glnD; (GenBank) bifunctional uridylyltransferase/uridylyl-removing protein GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D ABIS04_14630 glnD; (GenBank) [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D ABIS04_05105 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D ABIS04_01435 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D ABIS04_01430 glnG; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D ABIS04_01455 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_04460 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_05850 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ABIS04_05845 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D ABIS04_16605 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D ABIS04_18160 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D ABIS04_09060 cybH; (GenBank) Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D ABIS04_13155 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ABIS04_00405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_01500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_02510 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_02835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_04130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_06780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_06940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08705 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_10215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_11080 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_11935 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_13475 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_17835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_18465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_19485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_03145 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D ABIS04_13810 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D ABIS04_12920 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ABIS04_12925 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ABIS04_12945 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ABIS04_12955 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_16890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_12940 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ABIS04_05975 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_11010 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_13160 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_09085 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D ABIS04_05865 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ABIS04_14440 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D ABIS04_05860 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D ABIS04_05855 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D ABIS04_09650 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D ABIS04_09655 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D ABIS04_13065 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D ABIS04_13060 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D ABIS04_13055 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D ABIS04_15920 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ABIS04_05150 glsB; (GenBank) glutaminase B K01425 glsA; glutaminase [EC:3.5.1.2] D ABIS04_10235 HAMP domain-containing sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D ABIS04_10230 response regulator K15012 regA; two-component system, response regulator RegA D ABIS04_15995 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D ABIS04_15990 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ABIS04_15985 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D ABIS04_09525 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D ABIS04_09520 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D ABIS04_09515 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D ABIS04_09510 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D ABIS04_13490 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D ABIS04_17105 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D ABIS04_13485 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D ABIS04_17100 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D ABIS04_13480 cydX; (GenBank) cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D ABIS04_16130 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein D ABIS04_17910 TolC family protein K12340 tolC; outer membrane protein D ABIS04_05270 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D ABIS04_11575 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D ABIS04_13170 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D ABIS04_09275 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome [PATH:sheh04146] D ABIS04_01625 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_04055 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_07830 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_08150 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_09280 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_19260 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_01950 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ABIS04_10765 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ABIS04_05765 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ABIS04_02745 katB; (GenBank) catalase KatB K03781 katE; catalase [EC:1.11.1.6] D ABIS04_08205 sodB; (GenBank) superoxide dismutase [Fe] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:sheh04148] D ABIS04_16730 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D ABIS04_15995 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:sheh02024] D ABIS04_14435 luxS; (GenBank) S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D ABIS04_16015 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D ABIS04_11875 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ABIS04_11880 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D ABIS04_04915 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ABIS04_10930 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ABIS04_15590 aroG; (GenBank) 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ABIS04_13555 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D ABIS04_13560 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D ABIS04_01625 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_04055 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_07830 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_08150 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_09280 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_19260 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_15920 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ABIS04_07275 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ABIS04_14040 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ABIS04_09115 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_17675 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_19610 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ABIS04_06065 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D ABIS04_18665 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ABIS04_14255 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D ABIS04_18500 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ABIS04_06015 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ABIS04_00645 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ABIS04_01245 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D ABIS04_18860 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D ABIS04_04890 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:sheh02030] D ABIS04_00405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_01500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_02510 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_02835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_04130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_06780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_06940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08705 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_10215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_11080 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_11935 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_13475 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_17835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_18465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_19485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_03145 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D ABIS04_13810 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D ABIS04_12945 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ABIS04_12920 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ABIS04_12925 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ABIS04_12955 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_16890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_12950 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D ABIS04_16440 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D ABIS04_12940 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ABIS04_05975 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_11010 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_13160 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_13155 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ABIS04_13040 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D ABIS04_13010 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D ABIS04_13005 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D ABIS04_05560 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D ABIS04_05565 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:sheh02040] D ABIS04_13050 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D ABIS04_13045 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D ABIS04_13040 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D ABIS04_13035 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D ABIS04_13030 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ABIS04_13025 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D ABIS04_13020 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D ABIS04_00260 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D ABIS04_13015 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D ABIS04_13010 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D ABIS04_13005 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D ABIS04_13000 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D ABIS04_12995 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D ABIS04_12990 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D ABIS04_12985 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D ABIS04_12975 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D ABIS04_12980 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D ABIS04_13165 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D ABIS04_13150 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D ABIS04_13145 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D ABIS04_13140 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D ABIS04_13135 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D ABIS04_13130 flgF; (GenBank) flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D ABIS04_13125 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D ABIS04_00780 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D ABIS04_13120 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D ABIS04_13115 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D ABIS04_13110 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D ABIS04_13105 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D ABIS04_13100 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D ABIS04_00790 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP D ABIS04_13450 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D ABIS04_16500 SEL1-like repeat protein K21217 motX; sodium-type polar flagellar protein MotX D ABIS04_11730 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D ABIS04_13090 flagellin K02406 fliC; flagellin D ABIS04_13095 flagellin K02406 fliC; flagellin D ABIS04_13080 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D ABIS04_13070 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D ABIS04_05560 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D ABIS04_05565 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D ABIS04_13170 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D ABIS04_13175 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D ABIS04_04525 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D ABIS04_13065 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D ABIS04_16605 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D ABIS04_13055 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D ABIS04_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D ABIS04_07690 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_13955 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:sheh04981] D ABIS04_03425 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D ABIS04_04120 folA; (GenBank) type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D ABIS04_14050 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ABIS04_04785 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D ABIS04_14810 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism D ABIS04_14810 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation D ABIS04_01550 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:sheh01501] D ABIS04_17270 porin K09476 ompF; outer membrane pore protein F D ABIS04_03965 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D ABIS04_11285 nagZ; (GenBank) beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ABIS04_17180 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D ABIS04_06085 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_10160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_11185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_14065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_17880 biotin/lipoyl-binding protein K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_19350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_06080 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_10155 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_11190 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_14070 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_17885 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_19345 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_09115 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_17675 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_16130 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein D ABIS04_17910 TolC family protein K12340 tolC; outer membrane protein D ABIS04_01665 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ABIS04_03750 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ABIS04_00575 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ABIS04_14735 blaDIM; (GenBank) DIM/SIM/IMP family subclass B1 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:sheh01502] D ABIS04_06745 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ABIS04_16445 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D ABIS04_00585 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ABIS04_00590 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ABIS04_00605 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sheh01503] D ABIS04_13545 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D ABIS04_13540 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D ABIS04_01075 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D ABIS04_06615 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D ABIS04_06610 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D ABIS04_06605 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D ABIS04_06600 oligopeptide/dipeptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D ABIS04_06595 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D ABIS04_01405 ATP-binding protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D ABIS04_01410 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D ABIS04_16030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ABIS04_01870 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D ABIS04_03975 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D ABIS04_06085 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_10160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_11185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_14065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_17880 biotin/lipoyl-binding protein K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_19350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_06080 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_10155 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_11190 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_14070 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_17885 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_19345 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_16130 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein D ABIS04_17910 TolC family protein K12340 tolC; outer membrane protein D ABIS04_12665 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ABIS04_17715 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:sheh01000] C 01001 Protein kinases [BR:sheh01001] D ABIS04_08865 PA4780 family RIO1-like protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D ABIS04_09595 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D ABIS04_05395 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D ABIS04_17550 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D ABIS04_12155 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D ABIS04_05655 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ABIS04_13545 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D ABIS04_00945 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D ABIS04_01405 ATP-binding protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D ABIS04_07630 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D ABIS04_13555 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D ABIS04_18960 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ABIS04_15625 narQ; (GenBank) nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D ABIS04_13980 barA; (GenBank) two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D ABIS04_01610 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D ABIS04_07300 sensor histidine kinase K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D ABIS04_01435 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D ABIS04_05850 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ABIS04_19010 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D ABIS04_12945 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ABIS04_09650 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D ABIS04_13060 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D ABIS04_10235 HAMP domain-containing sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:sheh01009] D ABIS04_07460 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D ABIS04_14150 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:sheh01002] D ABIS04_05050 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D ABIS04_06815 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D ABIS04_18175 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ABIS04_09055 HyaD/HybD family hydrogenase maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D ABIS04_13510 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ABIS04_04455 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D ABIS04_18725 NlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC D ABIS04_12080 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ABIS04_04740 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ABIS04_19500 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ABIS04_07785 asnB; (GenBank) asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D ABIS04_07885 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D ABIS04_15735 L,D-transpeptidase family protein K19235 ybiS; L,D-transpeptidase YbiS D ABIS04_11815 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D ABIS04_05665 M1 family metallopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D ABIS04_10615 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ABIS04_15680 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ABIS04_19415 prlC; (GenBank) oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D ABIS04_11095 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D ABIS04_17310 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D ABIS04_00250 immune inhibitor A domain-containing protein K09607 ina; immune inhibitor A [EC:3.4.24.-] D ABIS04_09740 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D ABIS04_14900 M13-type metalloendopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D ABIS04_01370 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D ABIS04_01375 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D ABIS04_13830 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D ABIS04_14365 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ABIS04_14550 pepA; (GenBank) leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ABIS04_15830 pepB; (GenBank) aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D ABIS04_08290 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ABIS04_14370 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D ABIS04_07140 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D ABIS04_12730 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D ABIS04_00070 pepQ; (GenBank) Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D ABIS04_04280 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D ABIS04_04275 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ABIS04_14275 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ABIS04_07610 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D ABIS04_08240 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D ABIS04_12690 rseP; (GenBank) sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D ABIS04_13660 M90 family metallopeptidase K09933 mtfA; MtfA peptidase D ABIS04_16530 degQ; (GenBank) Do family serine endopeptidase DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D ABIS04_16535 degS; (GenBank) outer membrane-stress sensor serine endopeptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D ABIS04_06065 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D ABIS04_17435 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D ABIS04_02545 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D ABIS04_03730 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ABIS04_14875 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D ABIS04_09895 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D ABIS04_06555 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D ABIS04_06565 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D ABIS04_01190 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D ABIS04_09715 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ABIS04_13345 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ABIS04_04845 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ABIS04_10620 prc; (GenBank) carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D ABIS04_13780 S41 family peptidase K08676 tri; tricorn protease [EC:3.4.21.-] D ABIS04_08835 sppA; (GenBank) signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D ABIS04_06665 sohB; (GenBank) protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D ABIS04_07605 pepE; (GenBank) dipeptidase PepE K05995 pepE; dipeptidase E [EC:3.4.13.21] D ABIS04_19140 glpG; (GenBank) rhomboid family intramembrane serine protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D ABIS04_10110 rrtA; (GenBank) rhombosortase K28165 rrtA; rhombosortase D ABIS04_18080 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D ABIS04_11790 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D ABIS04_11075 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ABIS04_09185 peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-] D ABIS04_14100 yegQ; (GenBank) tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D ABIS04_15000 U32 family peptidase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D ABIS04_14120 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D ABIS04_14115 peptidase U32 family protein K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D ABIS04_17845 pmbA; (GenBank) metalloprotease PmbA K03592 pmbA; PmbA protein D ABIS04_17915 tldD; (GenBank) metalloprotease TldD K03568 tldD; TldD protein D ABIS04_09865 eco; (GenBank) serine protease inhibitor ecotin K08276 eco; ecotin D ABIS04_16000 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D ABIS04_16005 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:sheh01003] D ABIS04_08750 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21] D ABIS04_17055 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_15805 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D ABIS04_01665 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ABIS04_00600 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_03745 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_05355 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_05360 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_00420 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D ABIS04_12570 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D ABIS04_12210 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D ABIS04_12205 glycosyltransferase family 2 protein K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-] D ABIS04_12175 glycosyltransferase family 2 protein K16555 exoO; succinoglycan biosynthesis protein ExoO [EC:2.4.-.-] D ABIS04_12200 glycosyltransferase family 2 protein K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-] D ABIS04_05250 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:sheh01005] D ABIS04_12665 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D ABIS04_12660 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D ABIS04_00630 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D ABIS04_12675 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D ABIS04_06515 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D ABIS04_11215 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D ABIS04_03245 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D ABIS04_08040 lpxM; (GenBank) lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D ABIS04_19115 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D ABIS04_01075 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D ABIS04_19110 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D ABIS04_08270 kdnA; (GenBank) 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase KdnA K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109] D ABIS04_08265 kdnB; (GenBank) 3-deoxy-alpha-D-manno-octulosonate 8-oxidase KdnB K19714 kdnB; 3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:1.1.3.48] D ABIS04_03920 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D ABIS04_08260 kdsB; (GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase KdsB K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D ABIS04_16585 kdsC; (GenBank) 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D ABIS04_16580 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D ABIS04_19105 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D ABIS04_01745 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ABIS04_07530 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D ABIS04_03250 hldE; (GenBank) bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ABIS04_19080 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D ABIS04_05355 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_05360 wecA; (GenBank) UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ABIS04_12215 NAD(P)-dependent oxidoreductase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sheh01011] D ABIS04_16540 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ABIS04_18705 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ABIS04_00610 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ABIS04_00595 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ABIS04_00580 murE; (GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ABIS04_06745 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ABIS04_16445 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D ABIS04_18230 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D ABIS04_00590 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ABIS04_00605 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ABIS04_04565 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ABIS04_02265 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D ABIS04_05035 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D ABIS04_01665 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D ABIS04_15805 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D ABIS04_03750 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D ABIS04_00575 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ABIS04_03730 serine hydrolase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D ABIS04_09895 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D ABIS04_14875 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D ABIS04_17055 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_00600 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_03745 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_15735 L,D-transpeptidase family protein K19235 ybiS; L,D-transpeptidase YbiS D ABIS04_11815 L,D-transpeptidase family protein K21470 ycbB; L,D-transpeptidase YcbB D ABIS04_07140 peptidoglycan DD-metalloendopeptidase family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D ABIS04_07885 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D ABIS04_06870 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D ABIS04_03740 mltB; (GenBank) lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D ABIS04_08180 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D ABIS04_10995 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D ABIS04_10555 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D ABIS04_13500 mltF; (GenBank) membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D ABIS04_10685 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D ABIS04_03735 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D ABIS04_16030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ABIS04_18150 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D ABIS04_04575 Lpp/OprI family alanine-zipper lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:sheh01004] D ABIS04_11510 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ABIS04_07520 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ABIS04_11515 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ABIS04_01520 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ABIS04_12120 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D ABIS04_01505 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ABIS04_11495 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ABIS04_01510 3-ketoacyl-ACP reductase FabG2 K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_11505 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_12370 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ABIS04_06260 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D ABIS04_12670 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ABIS04_06590 fabV; (GenBank) enoyl-ACP reductase FabV K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D ABIS04_06675 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ABIS04_05830 tesB; (GenBank) acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D ABIS04_18245 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D ABIS04_11640 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ABIS04_05795 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D ABIS04_01625 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_04055 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_07830 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_08150 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_09280 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_19260 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_06920 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D ABIS04_01195 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D ABIS04_11520 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D ABIS04_04550 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D ABIS04_16815 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:sheh01008] C 01006 Prenyltransferases [BR:sheh01006] D ABIS04_05550 ispA; (GenBank) (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D ABIS04_04090 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D ABIS04_12705 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ABIS04_16020 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ABIS04_05825 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D ABIS04_16690 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D ABIS04_00960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D ABIS04_01140 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:sheh01007] D ABIS04_05910 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ABIS04_06500 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D ABIS04_15845 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D ABIS04_04645 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ABIS04_01735 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ABIS04_06525 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ABIS04_18070 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ABIS04_10710 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ABIS04_05045 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ABIS04_14590 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ABIS04_03780 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ABIS04_02845 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ABIS04_10430 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ABIS04_08710 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D ABIS04_13615 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ABIS04_00035 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ABIS04_00030 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ABIS04_08475 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ABIS04_05690 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ABIS04_09430 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ABIS04_13900 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ABIS04_08025 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ABIS04_08030 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ABIS04_08940 amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D ABIS04_09955 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ABIS04_09450 amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D ABIS04_08070 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ABIS04_19125 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D ABIS04_11620 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D ABIS04_04425 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ABIS04_15955 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ABIS04_04500 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ABIS04_04465 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D ABIS04_11630 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D ABIS04_04600 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ABIS04_01890 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ABIS04_01950 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ABIS04_08915 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:sheh00194] D ABIS04_04255 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ABIS04_19515 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ABIS04_04260 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ABIS04_19520 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ABIS04_04220 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ABIS04_19525 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ABIS04_04225 alternate F1F0 ATPase, F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ABIS04_19530 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ABIS04_19535 atpH; (GenBank) F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ABIS04_04230 F0F1 ATP synthase subunit delta K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ABIS04_19540 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ABIS04_04235 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ABIS04_19545 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ABIS04_04240 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ABIS04_19550 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ABIS04_04250 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I D ABIS04_19555 ATP synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:sheh03000] D ABIS04_09215 helix-turn-helix domain-containing protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D ABIS04_06585 GyrI-like domain-containing protein K13652 K13652; AraC family transcriptional regulator D ABIS04_05955 AlkA N-terminal domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ABIS04_05580 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ABIS04_17865 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ABIS04_01920 ilvY; (GenBank) HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D ABIS04_14975 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D ABIS04_04800 nhaR; (GenBank) transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D ABIS04_04755 oxyR; (GenBank) hydrogen peroxide-inducible genes transcriptional activator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D ABIS04_11765 cysB; (GenBank) HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D ABIS04_11590 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D ABIS04_03590 agaR; (GenBank) transcriptional repressor AgaR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D ABIS04_12515 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ABIS04_08200 fadR; (GenBank) fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D ABIS04_18140 pdhR; (GenBank) pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ABIS04_09750 betI; (GenBank) transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D ABIS04_00470 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D ABIS04_19360 TetR/AcrR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D ABIS04_05410 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D ABIS04_15225 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D ABIS04_18730 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D ABIS04_13460 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D ABIS04_18240 fabR; (GenBank) HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D ABIS04_02460 asnC; (GenBank) transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D ABIS04_01285 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ABIS04_01460 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ABIS04_08450 lrp; (GenBank) leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ABIS04_15715 slyA; (GenBank) transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D ABIS04_02825 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ABIS04_15075 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ABIS04_02370 zntR; (GenBank) Zn(2+)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D ABIS04_07595 soxR; (GenBank) redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D ABIS04_02855 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D ABIS04_11130 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D ABIS04_15920 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ABIS04_09485 etrA; (GenBank) electron transport transcriptional regulator EtrA K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D ABIS04_07340 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D ABIS04_18835 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D ABIS04_06290 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D ABIS04_18810 metalloregulator ArsR/SmtB family transcription factor K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D ABIS04_00090 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D ABIS04_05025 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D ABIS04_10030 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D ABIS04_17180 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D ABIS04_18700 birA; (GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ABIS04_02150 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D ABIS04_04950 trpR; (GenBank) trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D ABIS04_13410 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D ABIS04_13065 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D ABIS04_18980 sigma 54-interacting transcriptional regulator K12146 hyfR; hydrogenase-4 transcriptional activator D ABIS04_15730 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D ABIS04_17730 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D ABIS04_06370 sugar diacid recognition domain-containing protein K02647 cdaR; carbohydrate diacid regulator D ABIS04_19390 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator D ABIS04_07445 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator D ABIS04_16980 metJ; (GenBank) met regulon transcriptional regulator MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D ABIS04_02770 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ABIS04_14445 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D ABIS04_19560 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ABIS04_05265 rfaH; (GenBank) transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D ABIS04_15530 argR; (GenBank) transcriptional regulator ArgR K03402 argR; transcriptional regulator of arginine metabolism D ABIS04_12440 tyrR; (GenBank) transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D ABIS04_10175 ACT domain-containing protein K03567 gcvR; glycine cleavage system transcriptional repressor D ABIS04_06620 pspF; (GenBank) phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D ABIS04_06635 pspC; (GenBank) envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D ABIS04_03485 rnk; (GenBank) nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D ABIS04_05235 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D ABIS04_15840 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D ABIS04_14045 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D ABIS04_16375 Cro/CI family transcriptional regulator K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D ABIS04_00560 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:sheh03021] D ABIS04_18475 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ABIS04_18635 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ABIS04_18630 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ABIS04_01640 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ABIS04_04525 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D ABIS04_13915 rpoS; (GenBank) RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D ABIS04_04820 rpoE; (GenBank) RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ABIS04_06105 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ABIS04_11020 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ABIS04_13790 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ABIS04_01260 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D ABIS04_16605 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D ABIS04_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D ABIS04_16785 rapA; (GenBank) RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D ABIS04_14235 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D ABIS04_14020 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D ABIS04_18660 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D ABIS04_15980 sspA; (GenBank) stringent starvation protein SspA K03599 sspA; stringent starvation protein A D ABIS04_15975 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D ABIS04_17765 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist D ABIS04_04825 anti sigma-E factor RseA C-terminal domain-containing protein K03597 rseA; sigma-E factor negative regulatory protein RseA D ABIS04_04830 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB D ABIS04_04835 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC D ABIS04_15840 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D ABIS04_14305 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D ABIS04_01065 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D ABIS04_02180 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho D ABIS04_10950 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:sheh03019] D ABIS04_11550 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D ABIS04_17930 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D ABIS04_04850 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D ABIS04_16495 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ABIS04_16060 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D ABIS04_02190 rhlB; (GenBank) ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D ABIS04_02910 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_03180 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_04200 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_05515 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_05965 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_08800 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D ABIS04_17805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ABIS04_00515 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ABIS04_09875 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ABIS04_07690 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_13955 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_14205 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ABIS04_02180 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho D ABIS04_14345 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D ABIS04_17570 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ABIS04_16015 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D ABIS04_15850 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D ABIS04_04770 rppH; (GenBank) RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D ABIS04_13895 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator D ABIS04_18040 csrD; (GenBank) RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD D ABIS04_02255 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D ABIS04_10565 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A D ABIS04_16810 rraB; (GenBank) ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B D ABIS04_16620 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D ABIS04_11780 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D ABIS04_15810 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:sheh03011] D ABIS04_08955 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ABIS04_12725 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ABIS04_18570 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ABIS04_18480 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ABIS04_18515 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ABIS04_16475 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ABIS04_18620 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ABIS04_18530 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ABIS04_16515 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ABIS04_18605 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ABIS04_18485 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ABIS04_18625 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ABIS04_18490 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ABIS04_18535 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ABIS04_14215 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ABIS04_04895 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ABIS04_18555 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ABIS04_16465 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ABIS04_18580 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ABIS04_05030 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ABIS04_04540 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D ABIS04_18650 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ABIS04_18585 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ABIS04_18600 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D ABIS04_18595 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ABIS04_18540 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ABIS04_18525 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ABIS04_16460 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D ABIS04_18645 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ABIS04_18655 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ABIS04_18640 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ABIS04_16520 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ABIS04_18550 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ABIS04_18505 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ABIS04_18565 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ABIS04_18470 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ABIS04_18520 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ABIS04_04910 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ABIS04_09445 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ABIS04_04095 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D ABIS04_18575 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ABIS04_18590 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ABIS04_18545 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ABIS04_04100 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ABIS04_00490 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ABIS04_18560 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ABIS04_18510 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D ABIS04_18050 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D ABIS04_11525 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ABIS04_00495 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ABIS04_19625 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D ABIS04_09440 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ABIS04_18495 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D ABIS04_11805 rplY; (GenBank) 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ABIS04_00185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00745 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_07535 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_14840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_15365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_18220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_19460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_07550 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_14835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_15360 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_18205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_19455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00195 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00670 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00680 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_07555 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_14830 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_15355 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_18200 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_19450 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:sheh03009] D ABIS04_04850 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D ABIS04_08865 PA4780 family RIO1-like protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D ABIS04_16060 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D ABIS04_04855 era; (GenBank) GTPase Era K03595 era; GTPase D ABIS04_04105 cgtA; (GenBank) Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D ABIS04_15840 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D ABIS04_14235 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D ABIS04_14020 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D ABIS04_18660 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D ABIS04_02790 23S rRNA pseudouridine(2604) synthase RluF K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D ABIS04_06690 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D ABIS04_14625 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D ABIS04_14895 rsuA; (GenBank) 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D ABIS04_04145 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D ABIS04_00110 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D ABIS04_08440 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D ABIS04_12910 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D ABIS04_02585 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D ABIS04_01240 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D ABIS04_02600 rsmE; (GenBank) 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D ABIS04_10660 rsmF; (GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D ABIS04_19570 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ABIS04_00565 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D ABIS04_01760 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D ABIS04_19320 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D ABIS04_04570 putative RNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D ABIS04_07955 rlmA; (GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D ABIS04_16490 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D ABIS04_14280 rlmE; (GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D ABIS04_00265 rlmF; (GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D ABIS04_04035 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D ABIS04_03755 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D ABIS04_06715 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D ABIS04_17230 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D ABIS04_19490 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D ABIS04_19325 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D ABIS04_06235 rlmKL; (GenBank) bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D ABIS04_05595 rlmM; (GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D ABIS04_13635 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D ABIS04_13975 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D ABIS04_02465 rluA; (GenBank) bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_04505 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_05985 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_14750 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_15140 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_17005 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_18405 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_11835 rluB; (GenBank) 23S rRNA pseudouridine(2605) synthase RluB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D ABIS04_11545 rluC; (GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D ABIS04_15390 rluD; (GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D ABIS04_10770 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D ABIS04_02880 rluF; (GenBank) 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D ABIS04_03710 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D ABIS04_07375 rimK; (GenBank) 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D ABIS04_12895 rimK; (GenBank) 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D ABIS04_04900 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D ABIS04_15305 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D ABIS04_02160 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D ABIS04_06175 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D ABIS04_10795 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D ABIS04_11550 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D ABIS04_17930 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D ABIS04_05240 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D ABIS04_03175 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D ABIS04_17805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ABIS04_15435 srmB; (GenBank) ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D ABIS04_16065 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D ABIS04_13600 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase D ABIS04_11570 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D ABIS04_16010 hflX; (GenBank) ribosome rescue GTPase HflX K03665 hflX; GTPase D ABIS04_00145 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ABIS04_01635 spoT; (GenBank) bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ABIS04_14225 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D ABIS04_14240 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D ABIS04_07100 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D ABIS04_03760 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein D ABIS04_03805 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D ABIS04_14285 yhbY; (GenBank) ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D ABIS04_07270 YibL family ribosome-associated protein K14762 yibL; ribosome-associated protein D ABIS04_17850 yjgA; (GenBank) ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein D ABIS04_06255 rmf; (GenBank) ribosome modulation factor K03812 rmf; ribosome modulation factor D ABIS04_04935 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A D ABIS04_13765 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A D ABIS04_03830 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D ABIS04_11530 yceD; (GenBank) 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:sheh03016] D ABIS04_04580 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D ABIS04_05910 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ABIS04_05690 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ABIS04_05045 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ABIS04_03780 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ABIS04_10710 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ABIS04_06500 glnS; (GenBank) glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D ABIS04_18070 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ABIS04_02845 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ABIS04_10430 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ABIS04_13900 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ABIS04_08710 asnS; (GenBank) asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D ABIS04_09430 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ABIS04_08475 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ABIS04_06525 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ABIS04_14590 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ABIS04_13615 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ABIS04_08025 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ABIS04_08030 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ABIS04_04645 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ABIS04_01735 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ABIS04_01480 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D ABIS04_11425 hinT; (GenBank) purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D ABIS04_05140 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D ABIS04_05700 tsaA; (GenBank) tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D ABIS04_12100 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ABIS04_14220 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ABIS04_13935 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D ABIS04_07345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ABIS04_00145 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ABIS04_16020 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ABIS04_19605 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D ABIS04_19575 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ABIS04_18250 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D ABIS04_12490 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D ABIS04_18260 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D ABIS04_19620 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D ABIS04_11735 rnt; (GenBank) ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D ABIS04_00455 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D ABIS04_08155 rnd; (GenBank) ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D ABIS04_14055 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D ABIS04_00035 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D ABIS04_00030 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D ABIS04_15845 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D ABIS04_15150 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D ABIS04_13505 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D ABIS04_16165 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D ABIS04_02155 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D ABIS04_07400 dusC; (GenBank) tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D ABIS04_03815 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D ABIS04_10440 cmoA; (GenBank) carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D ABIS04_10445 cmoB; (GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D ABIS04_18235 trmA; (GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D ABIS04_04905 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D ABIS04_03960 trmH; (GenBank) tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D ABIS04_07330 trmJ; (GenBank) tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D ABIS04_12075 tRNA (adenine(22)-N(1))-methyltransferase TrmK K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D ABIS04_01390 trmL; (GenBank) tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D ABIS04_15430 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D ABIS04_08360 trmY; (GenBank) tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D ABIS04_12765 truC; (GenBank) tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D ABIS04_02465 rluA; (GenBank) bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_04505 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_05985 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_14750 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_15140 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_17005 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_18405 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ABIS04_10780 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ABIS04_09475 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D ABIS04_00055 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ABIS04_08245 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D ABIS04_08485 tusB; (GenBank) sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D ABIS04_08490 tusC; (GenBank) sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D ABIS04_08495 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D ABIS04_08480 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D ABIS04_07355 iscA; (GenBank) iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D ABIS04_02715 ygfZ; (GenBank) tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D ABIS04_06510 miaE; (GenBank) tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D ABIS04_12125 mnmC; (GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D ABIS04_06005 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D ABIS04_10105 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D ABIS04_10100 queE; (GenBank) 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D ABIS04_12830 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D ABIS04_14960 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D ABIS04_18255 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D ABIS04_06010 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D ABIS04_05570 thiI; (GenBank) tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D ABIS04_12645 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D ABIS04_08125 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D ABIS04_04545 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D ABIS04_16035 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D ABIS04_02425 tcdA; (GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D ABIS04_16495 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D ABIS04_14205 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:sheh03012] D ABIS04_05230 yciH; (GenBank) stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1 D ABIS04_14230 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ABIS04_09435 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ABIS04_15880 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D ABIS04_12720 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts D ABIS04_18670 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D ABIS04_02665 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G D ABIS04_18615 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G D ABIS04_03895 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D ABIS04_12710 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor D ABIS04_03900 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D ABIS04_03825 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D ABIS04_10745 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D ABIS04_09950 efp; (GenBank) elongation factor P K02356 efp; elongation factor P D ABIS04_02840 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D ABIS04_14195 prfC; (GenBank) peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D ABIS04_17210 arfB; (GenBank) alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:sheh03110] D ABIS04_10750 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D ABIS04_15380 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D ABIS04_06560 clpX; (GenBank) ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D ABIS04_18085 hslU; (GenBank) HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D ABIS04_07460 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D ABIS04_14345 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D ABIS04_07365 hscA; (GenBank) Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D ABIS04_11300 yegD; (GenBank) molecular chaperone K04046 yegD; hypothetical chaperone protein D ABIS04_17570 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ABIS04_14340 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D ABIS04_08650 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein D ABIS04_04175 djlA; (GenBank) co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D ABIS04_07360 hscB; (GenBank) co-chaperone HscB K04082 hscB; molecular chaperone HscB D ABIS04_18360 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D ABIS04_05540 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D ABIS04_08700 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D ABIS04_07590 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D ABIS04_18355 hslR; (GenBank) ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D ABIS04_17575 co-chaperone GroES K04078 groES; chaperonin GroES D ABIS04_04275 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ABIS04_14275 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ABIS04_04240 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ABIS04_19550 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ABIS04_18860 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D ABIS04_01420 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy D ABIS04_16145 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D ABIS04_09020 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D ABIS04_09040 hypB; (GenBank) hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D ABIS04_06065 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D ABIS04_03975 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D ABIS04_06520 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D ABIS04_17275 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D ABIS04_06575 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D ABIS04_15650 fkpA; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D ABIS04_14325 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D ABIS04_05055 fkpB; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D ABIS04_04960 slyD; (GenBank) peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D ABIS04_10990 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D ABIS04_06480 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D ABIS04_17445 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D ABIS04_04155 surA; (GenBank) peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D ABIS04_02185 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin D ABIS04_14820 trxC; (GenBank) thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D ABIS04_07465 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D ABIS04_11655 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1 D ABIS04_08210 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D ABIS04_01870 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D ABIS04_08190 dsbB; (GenBank) disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D ABIS04_15415 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D ABIS04_17600 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D ABIS04_00730 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:sheh04131] D ABIS04_07380 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ABIS04_09795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_09805 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_10035 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ABIS04_07460 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:sheh03051] D ABIS04_07460 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:sheh03032] D ABIS04_03380 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ABIS04_10540 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ABIS04_11820 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D ABIS04_06570 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D ABIS04_16895 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D ABIS04_08035 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D ABIS04_08960 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D ABIS04_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ABIS04_16450 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ABIS04_16350 ATP-binding protein K02315 dnaC; DNA replication protein DnaC D ABIS04_04530 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D ABIS04_17785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ABIS04_12650 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ABIS04_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ABIS04_14585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ABIS04_03770 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ABIS04_10675 holB; (GenBank) DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ABIS04_07515 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_08685 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_10535 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_19600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_07430 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ABIS04_12655 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ABIS04_19150 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ABIS04_07080 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ABIS04_01710 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D ABIS04_09920 seqA; (GenBank) replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D ABIS04_08225 hda; (GenBank) DnaA inactivator Hda K10763 hda; DnaA-homolog protein D ABIS04_08910 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ABIS04_00020 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ABIS04_16095 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ABIS04_16105 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ABIS04_07015 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ABIS04_12070 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:sheh03036] D ABIS04_04850 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D ABIS04_05710 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS D ABIS04_11820 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D ABIS04_06570 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D ABIS04_16895 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D ABIS04_08035 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D ABIS04_08960 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D ABIS04_08650 DnaJ C-terminal domain-containing protein K05516 cbpA; curved DNA-binding protein D ABIS04_08655 chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM D ABIS04_00005 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ABIS04_10250 Dps family protein K04047 dps; starvation-inducible DNA-binding protein D ABIS04_02150 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D ABIS04_16015 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D ABIS04_01285 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ABIS04_01460 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ABIS04_08450 lrp; (GenBank) leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ABIS04_06960 yejK; (GenBank) nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein D ABIS04_07070 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein D ABIS04_11860 ScpA family protein K05896 scpA; segregation and condensation protein A D ABIS04_11855 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D ABIS04_00620 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA D ABIS04_13950 ftsB; (GenBank) cell division protein FtsB K05589 ftsB; cell division protein FtsB D ABIS04_01250 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ABIS04_00575 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ABIS04_08455 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ABIS04_00570 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL D ABIS04_00615 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D ABIS04_00600 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_01255 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ABIS04_00625 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ABIS04_07075 zipA; (GenBank) cell division protein ZipA K03528 zipA; cell division protein ZipA D ABIS04_03450 cell division protein ZapA K09888 zapA; cell division protein ZapA D ABIS04_01880 cell division protein ZapB K09892 zapB; cell division protein ZapB D ABIS04_10575 cell division protein ZapC K18657 zapC; cell division protein ZapC D ABIS04_18185 zapD; (GenBank) cell division protein ZapD K18778 zapD; cell division protein ZapD D ABIS04_15745 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE D ABIS04_16525 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE D ABIS04_16030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D ABIS04_06085 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_10160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_11185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_14065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_17880 biotin/lipoyl-binding protein K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_19350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_08170 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D ABIS04_08165 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D ABIS04_08160 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D ABIS04_01185 SulA-like leucine-rich domain-containing protein K13053 sulA; cell division inhibitor SulA D ABIS04_00470 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D ABIS04_09920 seqA; (GenBank) replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D ABIS04_17950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ABIS04_17945 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D ABIS04_17940 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D ABIS04_03745 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_07310 AAA family ATPase K03496 parA; chromosome partitioning protein D ABIS04_12930 ParA family protein K03496 parA; chromosome partitioning protein D ABIS04_19565 ParA family protein K03496 parA; chromosome partitioning protein D ABIS04_19560 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ABIS04_16095 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ABIS04_16105 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ABIS04_19575 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D ABIS04_19570 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ABIS04_02125 xerC; (GenBank) tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D ABIS04_11340 site-specific integrase K04763 xerD; integrase/recombinase XerD D ABIS04_13315 site-specific integrase K04763 xerD; integrase/recombinase XerD D ABIS04_15420 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D ABIS04_10705 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D ABIS04_19155 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:sheh03400] D ABIS04_05960 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D ABIS04_04350 phrB; (GenBank) deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D ABIS04_04085 ung; (GenBank) uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ABIS04_05135 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D ABIS04_10400 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ABIS04_02380 S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D ABIS04_18195 mutT; (GenBank) 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ABIS04_00475 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D ABIS04_05955 AlkA N-terminal domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ABIS04_00040 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D ABIS04_19055 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ABIS04_11915 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D ABIS04_15410 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D ABIS04_07080 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ABIS04_19150 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ABIS04_17795 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D ABIS04_10335 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D ABIS04_06330 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D ABIS04_16695 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ABIS04_18635 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ABIS04_18630 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ABIS04_18475 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ABIS04_01640 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ABIS04_11275 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ABIS04_13910 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D ABIS04_16025 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D ABIS04_04765 mutH; (GenBank) DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH D ABIS04_07945 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D ABIS04_13520 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ABIS04_05555 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ABIS04_12650 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ABIS04_00010 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ABIS04_14585 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D ABIS04_03770 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ABIS04_10675 holB; (GenBank) DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ABIS04_07515 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_08685 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_10535 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_19600 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ABIS04_07430 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ABIS04_17785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ABIS04_01710 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D ABIS04_06845 UvrD-helicase domain-containing protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D ABIS04_06850 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D ABIS04_06840 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D ABIS04_13905 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA D ABIS04_10415 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ABIS04_10410 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ABIS04_10420 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ABIS04_18065 priA; (GenBank) primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D ABIS04_16470 priB; (GenBank) primosomal replication protein N K02686 priB; primosomal replication protein N D ABIS04_06410 primosomal replication protein K04067 priC; primosomal replication protein N'' D ABIS04_07135 AAA family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D ABIS04_07130 sbcD; (GenBank) exonuclease subunit SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D ABIS04_14135 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D ABIS04_00015 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D ABIS04_01600 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D ABIS04_04860 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D ABIS04_07455 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR D ABIS04_14000 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D ABIS04_05645 rdgC; (GenBank) recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D ABIS04_11650 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD D ABIS04_08910 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ABIS04_00020 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ABIS04_07015 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ABIS04_11820 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D ABIS04_06570 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D ABIS04_16895 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D ABIS04_02150 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D ABIS04_08035 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D ABIS04_08960 ihfB; (GenBank) integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D ABIS04_00515 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ABIS04_09875 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ABIS04_05710 H-NS family nucleoid-associated regulatory protein K03746 hns; DNA-binding protein H-NS D ABIS04_14375 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D ABIS04_09710 Y-family DNA polymerase K03502 umuC; DNA polymerase V D ABIS04_13340 Y-family DNA polymerase K03502 umuC; DNA polymerase V D ABIS04_09715 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ABIS04_13345 umuD; (GenBank) translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ABIS04_01190 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D ABIS04_06425 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D ABIS04_09095 RecX family transcriptional regulator K03565 recX; regulatory protein D ABIS04_01960 rep; (GenBank) DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D ABIS04_06420 dinG; (GenBank) ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D ABIS04_08120 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D ABIS04_08895 nrdA; (GenBank) class 1a ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ABIS04_08890 nrdB; (GenBank) class Ia ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:sheh03029] D ABIS04_15990 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D ABIS04_14230 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ABIS04_09435 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ABIS04_12720 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts D ABIS04_18670 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D ABIS04_02665 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G D ABIS04_18615 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G D ABIS04_04855 era; (GenBank) GTPase Era K03595 era; GTPase D ABIS04_04645 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ABIS04_03780 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ABIS04_10430 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ABIS04_18070 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ABIS04_17785 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ABIS04_12685 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D ABIS04_14345 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D ABIS04_05540 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D ABIS04_17570 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ABIS04_17575 co-chaperone GroES K04078 groES; chaperonin GroES D ABIS04_14340 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D ABIS04_07345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ABIS04_07360 hscB; (GenBank) co-chaperone HscB K04082 hscB; molecular chaperone HscB D ABIS04_08210 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D ABIS04_10705 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D ABIS04_00960 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D ABIS04_01140 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D ABIS04_01170 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D ABIS04_01145 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ABIS04_19610 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ABIS04_01135 SCO family protein K07152 SCO1; protein SCO1 D ABIS04_01495 SCO family protein K07152 SCO1; protein SCO1 D ABIS04_07460 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:sheh02000] D ABIS04_11220 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D ABIS04_05295 ABC transporter ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D ABIS04_15580 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D ABIS04_05950 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D ABIS04_04050 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D ABIS04_02015 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ABIS04_03195 cydC; (GenBank) cysteine/glutathione ABC transporter ATP-binding protein/permease CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D ABIS04_03190 cydD; (GenBank) cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D ABIS04_09110 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D ABIS04_06245 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D ABIS04_15635 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ABIS04_18435 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ABIS04_18430 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D ABIS04_18425 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ABIS04_11980 ATP-binding cassette domain-containing protein K05776 modF; molybdate transport system ATP-binding protein D ABIS04_19020 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D ABIS04_19025 ABC transporter permease K05773 tupB; tungstate transport system permease protein D ABIS04_19030 energy-coupling factor ABC transporter ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D ABIS04_15550 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D ABIS04_15545 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D ABIS04_15540 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ABIS04_04470 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein D ABIS04_04485 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein D ABIS04_04480 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein D ABIS04_04475 potA; (GenBank) polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D ABIS04_03035 proX; (GenBank) glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D ABIS04_03040 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D ABIS04_03045 proV; (GenBank) glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D ABIS04_04705 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein D ABIS04_04700 ABC transporter permease subunit K05778 ynjC; putative thiamine transport system permease protein D ABIS04_04695 ATP-binding cassette domain-containing protein K05779 ynjD; putative thiamine transport system ATP-binding protein D ABIS04_09730 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ABIS04_16560 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ABIS04_17750 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D ABIS04_09720 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ABIS04_16565 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ABIS04_17755 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D ABIS04_09725 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ABIS04_16570 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ABIS04_17760 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D ABIS04_16555 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D ABIS04_17745 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D ABIS04_16550 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D ABIS04_01320 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D ABIS04_05660 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D ABIS04_12310 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D ABIS04_12305 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D ABIS04_12300 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ABIS04_06980 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D ABIS04_06990 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D ABIS04_06985 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ABIS04_14080 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ABIS04_17635 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ABIS04_06615 ABC transporter substrate-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein D ABIS04_06610 ABC transporter permease K19227 sapB; cationic peptide transport system permease protein D ABIS04_06605 ABC transporter permease subunit K19228 sapC; cationic peptide transport system permease protein D ABIS04_06600 oligopeptide/dipeptide ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D ABIS04_06595 ATP-binding cassette domain-containing protein K19230 sapF; cationic peptide transport system ATP-binding protein D ABIS04_03685 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D ABIS04_03680 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D ABIS04_14795 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D ABIS04_03675 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D ABIS04_14800 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D ABIS04_14715 cobalamin-binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein D ABIS04_08600 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein D ABIS04_08595 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D ABIS04_16825 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D ABIS04_16820 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D ABIS04_14545 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D ABIS04_14540 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D ABIS04_16600 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D ABIS04_19290 ABC transporter permease K09696 natB; sodium transport system permease protein D ABIS04_19285 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D ABIS04_11255 lolE; (GenBank) lipoprotein-releasing ABC transporter permease subunit LolE K09808 lolC_E_F; lipoprotein-releasing system permease protein D ABIS04_11265 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein D ABIS04_11260 lolD; (GenBank) lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ABIS04_00695 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D D ABIS04_00700 ccmC; (GenBank) heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C D ABIS04_00705 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B D ABIS04_00710 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D ABIS04_01255 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ABIS04_01250 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ABIS04_02990 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D ABIS04_07580 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D ABIS04_07970 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein D ABIS04_08660 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D ABIS04_17895 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D ABIS04_17900 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D ABIS04_02985 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ABIS04_07965 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ABIS04_08665 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ABIS04_19270 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ABIS04_02705 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D ABIS04_06685 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D ABIS04_08635 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D ABIS04_14680 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D ABIS04_14685 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D ABIS04_02710 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ABIS04_06680 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ABIS04_08640 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ABIS04_14690 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ABIS04_12030 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D ABIS04_09415 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D ABIS04_01125 dinF; (GenBank) MATE family efflux transporter DinF K26937 dinF; MATE family, multidrug efflux pump D ABIS04_07735 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D ABIS04_17580 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D ABIS04_08435 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D ABIS04_12500 fucP; (GenBank) L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D ABIS04_04005 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D ABIS04_12040 MFS transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D ABIS04_06185 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D ABIS04_18800 arsJ; (GenBank) organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D ABIS04_11445 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D ABIS04_03965 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D ABIS04_01335 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D ABIS04_07900 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D ABIS04_09100 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D ABIS04_00905 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D ABIS04_06905 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D ABIS04_02405 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D ABIS04_05840 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D ABIS04_08305 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D ABIS04_04775 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D ABIS04_08310 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D ABIS04_16625 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D ABIS04_08300 crr; (GenBank) PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D ABIS04_12755 PTS transporter subunit EIIC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D ABIS04_16615 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D ABIS04_07730 ion transporter K10716 kch; voltage-gated potassium channel D ABIS04_15800 ion transporter K10716 kch; voltage-gated potassium channel D ABIS04_15285 ammonium transporter K03320 amt; ammonium transporter, Amt family D ABIS04_15610 ammonium transporter K03320 amt; ammonium transporter, Amt family D ABIS04_09570 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ABIS04_14920 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ABIS04_15060 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D ABIS04_15980 sspA; (GenBank) stringent starvation protein SspA K03599 sspA; stringent starvation protein A D ABIS04_06115 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D ABIS04_06120 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D ABIS04_07880 marine proteobacterial sortase target protein K07114 yfbK; Ca-activated chloride channel homolog D ABIS04_13795 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D ABIS04_08500 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D ABIS04_10825 focA; (GenBank) formate transporter FocA K06212 focA; formate transporter D ABIS04_16080 mechanosensitive ion channel domain-containing protein K22051 mscM; miniconductance mechanosensitive channel D ABIS04_01395 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D ABIS04_01770 mechanosensitive ion channel domain-containing protein K03442 mscS; small conductance mechanosensitive channel D ABIS04_05480 mechanosensitive ion channel domain-containing protein K03442 mscS; small conductance mechanosensitive channel D ABIS04_16735 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D ABIS04_16850 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel D ABIS04_19185 mechanosensitive ion channel domain-containing protein K16053 ybdG; miniconductance mechanosensitive channel D ABIS04_05675 magnesium transporter K06213 mgtE; magnesium transporter D ABIS04_16630 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter D ABIS04_05560 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D ABIS04_05565 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D ABIS04_16500 SEL1-like repeat protein K21217 motX; sodium-type polar flagellar protein MotX D ABIS04_11730 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D ABIS04_03650 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D ABIS04_03655 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D ABIS04_06450 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D ABIS04_06455 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D ABIS04_03645 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D ABIS04_06460 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D ABIS04_11720 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ D ABIS04_11715 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR D ABIS04_06965 corA; (GenBank) magnesium/cobalt transporter CorA K03284 corA; magnesium transporter D ABIS04_14455 magnesium transporter CorA family protein K03284 corA; magnesium transporter D ABIS04_15645 zinc transporter ZntB K16074 zntB; zinc transporter D ABIS04_08470 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D ABIS04_01915 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ABIS04_04880 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ABIS04_17270 porin K09476 ompF; outer membrane pore protein F D ABIS04_08575 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D ABIS04_05000 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D ABIS04_05475 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D ABIS04_00545 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D ABIS04_06090 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D ABIS04_14180 outer membrane protein OmpK K05517 tsx; nucleoside-specific channel-forming protein D ABIS04_02925 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D ABIS04_00410 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D ABIS04_14430 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D ABIS04_17825 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D ABIS04_01785 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_01790 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_03690 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_04060 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_06430 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_07385 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_07390 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_07665 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_08425 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_08590 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_08760 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_10520 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_14925 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_14985 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_15205 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_18875 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_18885 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D ABIS04_09385 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D ABIS04_16130 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein D ABIS04_17910 TolC family protein K12340 tolC; outer membrane protein D ABIS04_02005 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D ABIS04_09115 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_17675 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_12160 polysaccharide biosynthesis/export family protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D ABIS04_05270 SLBB domain-containing protein K01991 wza; polysaccharide biosynthesis/export protein D ABIS04_12685 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D ABIS04_13605 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D ABIS04_10165 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D ABIS04_15395 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D ABIS04_13695 bamE; (GenBank) outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D ABIS04_11795 autotransporter assembly complex family protein K07278 tamA; translocation and assembly module TamA D ABIS04_11800 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D ABIS04_16595 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D ABIS04_16590 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D ABIS04_04160 lptD; (GenBank) LPS assembly protein LptD K04744 lptD; LPS-assembly protein D ABIS04_03775 lptE; (GenBank) LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D ABIS04_12165 outer membrane beta-barrel protein K20920 vpsM; polysaccharide biosynthesis protein VpsM D ABIS04_03800 corC; (GenBank) CNNM family magnesium/cobalt transport protein CorC K06189 corC; hemolysin (HlyC) family protein D ABIS04_06280 CidA/LrgA family protein K06518 cidA; holin-like protein D ABIS04_08345 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D ABIS04_01290 yjeH; (GenBank) L-methionine/branched-chain amino acid transporter K16263 yjeH; amino acid efflux transporter D ABIS04_01425 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D ABIS04_03075 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter D ABIS04_03120 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D ABIS04_09375 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D ABIS04_01210 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D ABIS04_18720 multidrug efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump D ABIS04_06080 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_10155 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_11190 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_14070 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_17885 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_19345 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_00370 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump D ABIS04_00365 DMT family transporter K11939 rhtA; inner membrane transporter RhtA D ABIS04_00505 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D ABIS04_11745 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter D ABIS04_06365 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D ABIS04_18915 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D ABIS04_00445 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D ABIS04_05530 L-lactate permease K03303 lutP; lactate permease D ABIS04_17440 BCCT family transporter K05020 opuD; glycine betaine transporter D ABIS04_17870 SLAC1 anion channel family protein K03304 tehA; tellurite resistance protein D ABIS04_01620 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D ABIS04_16575 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D ABIS04_06095 putP; (GenBank) sodium/proline symporter PutP K11928 putP; sodium/proline symporter D ABIS04_07505 sodium:solute symporter family protein K14393 actP; cation/acetate symporter D ABIS04_05980 sstT; (GenBank) serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D ABIS04_04790 nhaA; (GenBank) Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D ABIS04_08195 nhaB; (GenBank) sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D ABIS04_02350 nhaC; (GenBank) Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D ABIS04_17350 nhaC; (GenBank) Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D ABIS04_05725 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D ABIS04_17165 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D ABIS04_10715 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D ABIS04_12595 monovalent cation:proton antiporter-2 (CPA2) family protein K03455 KEA1_2_3; K+:H+ antiporter D ABIS04_05745 cation:proton antiporter K26730 napA; Na+:H+ antiporter D ABIS04_00080 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D ABIS04_00100 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D ABIS04_00105 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D ABIS04_08215 uracil-xanthine permease family protein K02824 uraA; uracil permease D ABIS04_04270 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D ABIS04_14360 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D ABIS04_02800 aromatic amino acid transport family protein K03834 tyrP; tyrosine-specific transport protein D ABIS04_01200 mtr; (GenBank) tryptophan permease K03835 mtr; tryptophan-specific transport protein D ABIS04_04610 chloride channel protein K03281 clcA; chloride channel protein, CIC family D ABIS04_02830 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter D ABIS04_00995 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D ABIS04_17650 dauA; (GenBank) C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D ABIS04_12790 Nramp family divalent metal transporter K03322 mntH; manganese transport protein D ABIS04_05865 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D ABIS04_14440 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D ABIS04_05860 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D ABIS04_05855 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D ABIS04_05035 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D ABIS04_11135 AEC family transporter K13936 mdcF; malonate transporter and related proteins D ABIS04_13995 AEC family transporter K13936 mdcF; malonate transporter and related proteins D ABIS04_11065 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein D ABIS04_04070 LysE family translocator K05835 rhtC; threonine efflux protein D ABIS04_06995 LysE family transporter K05835 rhtC; threonine efflux protein D ABIS04_02960 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D ABIS04_02965 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D ABIS04_08250 AI-2E family transporter K03548 perM; putative permease D ABIS04_19005 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter D ABIS04_01025 VIT family protein K22736 VIT; vacuolar iron transporter family protein D ABIS04_00600 ftsW; (GenBank) cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D ABIS04_04730 cytochrome c/FTR1 family iron permease K07243 FTR; high-affinity iron transporter D ABIS04_03640 TonB family protein K03832 tonB; periplasmic protein TonB D ABIS04_06465 energy transducer TonB K03832 tonB; periplasmic protein TonB D ABIS04_11700 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D ABIS04_11710 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D ABIS04_11705 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D ABIS04_13850 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D ABIS04_13855 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D ABIS04_13860 OadG family transporter subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D ABIS04_09645 phsA; (GenBank) thiosulfate reductase PhsA K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D ABIS04_09640 4Fe-4S dicluster domain-containing protein K16293 psrB; polysulfide reductase chain B D ABIS04_09635 nrfD; (GenBank) NrfD/PsrC family molybdoenzyme membrane anchor subunit K16294 psrC; polysulfide reductase chain C D ABIS04_06385 OmcA/MtrC family decaheme c-type cytochrome K28382 mtrC; iron---cytochrome-c reductase [EC:1.16.2.1] D ABIS04_06380 DmsE family decaheme c-type cytochrome K28380 mtrA_D; multiheme cytochrome MtrA/D D ABIS04_06375 MtrB/PioB family decaheme-associated outer membrane protein K28381 mtrB_E; extracellular iron oxide respiratory system outer membrane component MtrB/E D ABIS04_02400 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D ABIS04_09380 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D ABIS04_17190 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D ABIS04_01215 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D ABIS04_02010 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D ABIS04_18715 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D ABIS04_06085 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_10160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_11185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_14065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_17880 biotin/lipoyl-binding protein K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_19350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_09105 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D ABIS04_12155 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D ABIS04_01740 BON domain-containing protein K28369 dolP; outer membrane lipoprotein DolP D ABIS04_11395 pnuC; (GenBank) nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D ABIS04_06490 FeoA family protein K04758 feoA; ferrous iron transport protein A D ABIS04_06495 feoB; (GenBank) Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B D ABIS04_10640 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA D ABIS04_10645 paraquat-inducible protein A K03808 pqiA; intermembrane transport protein PqiA/LetA D ABIS04_10650 MlaD family protein K06192 pqiB; intermembrane transport protein PqiB/LetB D ABIS04_09735 PqiC family protein K09857 pqiC; intermembrane transport lipoprotein PqiC D ABIS04_00725 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:sheh02044] D ABIS04_16130 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein D ABIS04_17910 TolC family protein K12340 tolC; outer membrane protein D ABIS04_02015 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D ABIS04_02010 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D ABIS04_02005 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D ABIS04_04585 AAA family ATPase K02450 gspA; general secretion pathway protein A D ABIS04_04590 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B D ABIS04_18350 gspC; (GenBank) type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D ABIS04_18345 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D ABIS04_18340 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D ABIS04_18335 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D ABIS04_18330 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D ABIS04_18325 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H D ABIS04_18320 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D ABIS04_18315 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D ABIS04_18310 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D ABIS04_18305 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D ABIS04_18300 type II secretion system protein M K02462 gspM; general secretion pathway protein M D ABIS04_18295 type II secretion system protein N K02463 gspN; general secretion pathway protein N D ABIS04_18175 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ABIS04_18160 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D ABIS04_18165 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D ABIS04_18170 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D ABIS04_05085 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D ABIS04_13630 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D ABIS04_01670 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D ABIS04_01675 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D ABIS04_01680 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D ABIS04_01685 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D ABIS04_01690 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D ABIS04_05205 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D ABIS04_05210 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D ABIS04_05065 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D ABIS04_05070 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D ABIS04_05075 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D ABIS04_05080 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1 D ABIS04_10670 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D ABIS04_05095 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D ABIS04_05100 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D ABIS04_03790 prepilin-type N-terminal cleavage/methylation domain-containing protein K10924 mshA; MSHA pilin protein MshA D ABIS04_04045 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D ABIS04_17980 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D ABIS04_19305 type II secretion system protein K10924 mshA; MSHA pilin protein MshA D ABIS04_04080 prepilin-type N-terminal cleavage/methylation domain-containing protein K10925 mshB; MSHA pilin protein MshB D ABIS04_17985 type II secretion system protein K10925 mshB; MSHA pilin protein MshB D ABIS04_17975 type II secretion system protein K10926 mshC; MSHA pilin protein MshC D ABIS04_17970 prepilin-type N-terminal cleavage/methylation domain-containing protein K10927 mshD; MSHA pilin protein MshD D ABIS04_18000 ATPase, T2SS/T4P/T4SS family K12276 mshE; MSHA biogenesis protein MshE D ABIS04_17995 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG D ABIS04_18030 fimbrial assembly protein K12279 mshI; MSHA biogenesis protein MshI D ABIS04_18035 biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI D ABIS04_18025 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ D ABIS04_18020 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK D ABIS04_18015 mshL; (GenBank) pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D ABIS04_18010 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM D ABIS04_18005 tetratricopeptide repeat protein K12284 mshN; MSHA biogenesis protein MshN D ABIS04_17965 prepilin-type N-terminal cleavage/methylation domain-containing protein K12285 mshO; MSHA biogenesis protein MshO D ABIS04_17960 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP D ABIS04_17955 DUF6701 domain-containing protein K12287 mshQ; MSHA biogenesis protein MshQ D ABIS04_05190 YggT family protein K02221 yggT; YggT family protein D ABIS04_06650 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA D ABIS04_17075 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D ABIS04_11225 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D ABIS04_12975 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D ABIS04_12980 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D ABIS04_05450 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D ABIS04_13045 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D ABIS04_13035 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D ABIS04_13030 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ABIS04_13005 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D ABIS04_13000 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D ABIS04_12995 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D ABIS04_12990 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D ABIS04_12985 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D ABIS04_15415 dsbC; (GenBank) bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D ABIS04_00645 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ABIS04_18860 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D ABIS04_06020 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ABIS04_14295 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D ABIS04_18665 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D ABIS04_06025 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ABIS04_14290 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D ABIS04_14255 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D ABIS04_18500 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ABIS04_04890 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ABIS04_01245 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D ABIS04_06015 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D ABIS04_19610 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D ABIS04_02235 tatA; (GenBank) Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D ABIS04_02230 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D ABIS04_02225 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:sheh02042] D ABIS04_15155 TDT family transporter K11041 eta; exfoliative toxin A/B D ABIS04_01915 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ABIS04_04880 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ABIS04_10120 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:sheh02022] D ABIS04_05655 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ABIS04_05650 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D ABIS04_13545 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D ABIS04_13540 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D ABIS04_00945 envZ; (GenBank) two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D ABIS04_00950 ompR; (GenBank) two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D ABIS04_01405 ATP-binding protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D ABIS04_01410 response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D ABIS04_07630 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D ABIS04_07635 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D ABIS04_13555 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D ABIS04_13560 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D ABIS04_02550 arcA; (GenBank) two-component system response regulator ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D ABIS04_18960 HAMP domain-containing sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ABIS04_07865 pdsR; (GenBank) proteobacterial dedicated sortase system response regulator K02483 K02483; two-component system, OmpR family, response regulator D ABIS04_08810 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D ABIS04_15930 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D ABIS04_18415 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D ABIS04_18955 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D ABIS04_15625 narQ; (GenBank) nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D ABIS04_15630 response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D ABIS04_13980 barA; (GenBank) two-component sensor histidine kinase BarA K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D ABIS04_06325 uvrY; (GenBank) UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D ABIS04_01610 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3] D ABIS04_01605 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR D ABIS04_07300 sensor histidine kinase K27882 btsS; two-component system, LytTR family, low-concentration pyruvate sensor kinase [EC:2.7.13.3] D ABIS04_07295 btsR; (GenBank) two-component system response regulator BtsR K27883 btsR; two-component system, LytTR family, low-concentration pyruvate response regulator D ABIS04_01435 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D ABIS04_01430 glnG; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D ABIS04_05850 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D ABIS04_05845 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D ABIS04_19010 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D ABIS04_12945 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ABIS04_12955 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_16890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_12940 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ABIS04_05975 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_11010 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_13160 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_09085 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D ABIS04_09650 PhnD/SsuA/transferrin family substrate-binding protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D ABIS04_09655 response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D ABIS04_13060 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D ABIS04_13055 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D ABIS04_10235 HAMP domain-containing sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D ABIS04_10230 response regulator K15012 regA; two-component system, response regulator RegA D ABIS04_11460 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:sheh02035] D ABIS04_12945 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D ABIS04_12920 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ABIS04_12925 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D ABIS04_16440 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX D ABIS04_13155 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D ABIS04_12940 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D ABIS04_12955 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_16890 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D ABIS04_12950 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D ABIS04_05975 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_11010 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_13160 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D ABIS04_00405 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_01500 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_02510 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_02835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_04130 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_06780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_06940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08315 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08570 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08620 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_08705 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_10215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_11080 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_11935 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_13475 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_17835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_18465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_19485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D ABIS04_03145 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D ABIS04_13810 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D ABIS04_13035 fliH; (GenBank) flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D ABIS04_13030 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D ABIS04_13025 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D ABIS04_13000 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D ABIS04_12995 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D ABIS04_12990 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D ABIS04_12985 fliR; (GenBank) flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D ABIS04_12975 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D ABIS04_12980 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D ABIS04_13040 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D ABIS04_13010 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D ABIS04_13005 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D ABIS04_13045 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF D ABIS04_13115 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D ABIS04_13165 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D ABIS04_00780 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D ABIS04_13120 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D ABIS04_00260 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D ABIS04_13015 fliL; (GenBank) flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D ABIS04_13050 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D ABIS04_13020 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D ABIS04_13150 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D ABIS04_13145 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D ABIS04_13140 flgD; (GenBank) flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D ABIS04_13130 flgF; (GenBank) flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D ABIS04_13125 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D ABIS04_13110 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D ABIS04_13135 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D ABIS04_13105 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D ABIS04_13100 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D ABIS04_13175 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D ABIS04_00790 flagellar biosynthesis protein FlgP K09860 flgP; outer membrane protein FlgP D ABIS04_13450 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D ABIS04_16500 SEL1-like repeat protein K21217 motX; sodium-type polar flagellar protein MotX D ABIS04_11730 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D ABIS04_13090 flagellin K02406 fliC; flagellin D ABIS04_13095 flagellin K02406 fliC; flagellin D ABIS04_13080 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D ABIS04_13070 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D ABIS04_12960 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D ABIS04_05560 pomA; (GenBank) flagellar motor protein PomA K02556 motA; chemotaxis protein MotA D ABIS04_05565 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D ABIS04_13065 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D ABIS04_13060 HAMP domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D ABIS04_13055 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D ABIS04_13170 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D ABIS04_13085 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D ABIS04_12970 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D ABIS04_12965 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D ABIS04_05205 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D ABIS04_05210 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D ABIS04_18160 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D ABIS04_18165 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D ABIS04_18170 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D ABIS04_18175 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ABIS04_13630 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D ABIS04_01690 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ D ABIS04_01685 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D ABIS04_01680 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D ABIS04_01675 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D ABIS04_01670 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D ABIS04_10670 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D ABIS04_05065 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D ABIS04_05070 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D ABIS04_05075 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D ABIS04_05080 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1 D ABIS04_05085 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:sheh04812] D ABIS04_17950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ABIS04_00625 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ABIS04_00620 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA D ABIS04_08170 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D ABIS04_08165 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D ABIS04_08160 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D ABIS04_07310 AAA family ATPase K03496 parA; chromosome partitioning protein D ABIS04_12930 ParA family protein K03496 parA; chromosome partitioning protein D ABIS04_19565 ParA family protein K03496 parA; chromosome partitioning protein D ABIS04_19560 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:sheh04147] D ABIS04_07460 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D ABIS04_07690 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_13955 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ABIS04_09795 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_09805 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ABIS04_15485 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ABIS04_10035 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D ABIS04_03975 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D ABIS04_09660 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D ABIS04_11740 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D ABIS04_17570 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ABIS04_14345 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D ABIS04_04990 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ABIS04_02545 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D ABIS04_13515 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ABIS04_18670 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D ABIS04_11425 hinT; (GenBank) purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D ABIS04_01625 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_04055 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_07830 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_08150 fadD; (GenBank) long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_09280 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_19260 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D ABIS04_12400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ABIS04_07470 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ABIS04_07425 apt; (GenBank) adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D ABIS04_00830 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ABIS04_00825 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ABIS04_02540 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D ABIS04_17610 galK; (GenBank) galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D ABIS04_08730 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D ABIS04_00550 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D ABIS04_01455 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_04460 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ABIS04_02205 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ABIS04_11060 hppD; (GenBank) 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D ABIS04_12445 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D ABIS04_02590 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06790 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06795 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_02720 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ABIS04_02365 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ABIS04_18125 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ABIS04_05720 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D ABIS04_10025 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ABIS04_14260 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:sheh02048] D ABIS04_13260 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D ABIS04_13265 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D ABIS04_13270 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D ABIS04_01710 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D ABIS04_17325 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D ABIS04_05395 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D ABIS04_17550 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D ABIS04_06635 pspC; (GenBank) envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D ABIS04_06630 pspB; (GenBank) envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D ABIS04_13410 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D ABIS04_00625 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ABIS04_17950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D ABIS04_16095 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D ABIS04_16105 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D ABIS04_05910 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ABIS04_04810 protein YgfX K19168 cptA; toxin CptA D ABIS04_04805 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D ABIS04_07345 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:sheh04090] D ABIS04_02545 DPP IV N-terminal domain-containing protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] C 01504 Antimicrobial resistance genes [BR:sheh01504] D ABIS04_05725 Na+/H+ antiporter NhaC family protein K18218 tet35; tetracycline resistance efflux pump D ABIS04_17180 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D ABIS04_17715 mprF; (GenBank) bifunctional lysylphosphatidylglycerol flippase/synthetase MprF K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D ABIS04_13545 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D ABIS04_13540 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP D ABIS04_06085 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_10160 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_11185 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_14065 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_17880 biotin/lipoyl-binding protein K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_19350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D ABIS04_06080 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_10155 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_11190 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_14070 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_17885 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_19345 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D ABIS04_09115 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_17675 TolC family protein K18139 oprM; outer membrane protein, multidrug efflux system D ABIS04_18715 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system D ABIS04_18720 multidrug efflux RND transporter permease subunit K18299 mexF; multidrug efflux pump D ABIS04_13460 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D ABIS04_16130 tolC; (GenBank) outer membrane channel protein TolC K12340 tolC; outer membrane protein D ABIS04_17910 TolC family protein K12340 tolC; outer membrane protein D ABIS04_17270 porin K09476 ompF; outer membrane pore protein F C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sheh00537] D ABIS04_02590 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06790 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D ABIS04_06795 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:sheh03200] C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:sheh03100] D ABIS04_00660 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_05870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_05905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_07545 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_18210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ABIS04_01970 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_06540 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_13885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ABIS04_10340 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10345 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10350 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10355 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_10360 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ABIS04_00200 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ABIS04_00760 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ABIS04_10525 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ABIS04_06345 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ABIS04_09785 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ABIS04_03845 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ABIS04_03850 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ABIS04_03865 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ABIS04_05875 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05880 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05885 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_05900 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ABIS04_06340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_09790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_16045 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_16050 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_16055 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_18680 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ABIS04_01975 tRNA-His K14226 tRNA-His; tRNA His D ABIS04_06545 tRNA-His K14226 tRNA-His; tRNA His D ABIS04_00655 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ABIS04_07540 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ABIS04_18215 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ABIS04_02440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_03840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_03860 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_06350 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_09780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_11825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_14250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_15405 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ABIS04_11665 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11675 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11685 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_11690 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ABIS04_03835 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_03855 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_04520 tRNA-Ile K14230 tRNA-Met; tRNA Met D ABIS04_06210 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06215 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06220 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06225 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_06230 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_14245 tRNA-Met K14230 tRNA-Met; tRNA Met D ABIS04_05125 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ABIS04_15400 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ABIS04_01980 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_01985 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_06535 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_06945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ABIS04_06270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_08510 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_08795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_13870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_13890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_17315 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ABIS04_00675 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_05120 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_18675 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_18690 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ABIS04_15335 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ABIS04_10080 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_10085 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_10090 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_18685 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ABIS04_05915 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05920 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05925 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05930 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05935 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_05940 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_09405 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_09410 tRNA-Val K14237 tRNA-Val; tRNA Val D ABIS04_00185 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00745 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_07535 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_14840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_15365 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_18220 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_19460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ABIS04_00190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00665 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00750 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_07550 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_14835 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_15360 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_18205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_19455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ABIS04_00195 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00670 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00680 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_00755 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_07555 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_14830 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_15355 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_18200 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_19450 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ABIS04_03445 ssrS; (GenBank) 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA D ABIS04_06390 ffs; (GenBank) signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D ABIS04_12250 oleD; (GenBank) 2-alkyl-3-oxoalkanoate reductase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D ABIS04_14485 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D ABIS04_18805 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D ABIS04_08840 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D ABIS04_05420 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D ABIS04_15070 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D ABIS04_00865 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D ABIS04_11945 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D ABIS04_00860 molybdopterin cofactor-binding domain-containing protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D ABIS04_11940 molybdopterin cofactor-binding domain-containing protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D ABIS04_18460 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D ABIS04_07840 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D ABIS04_01490 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D ABIS04_02505 ahpF; (GenBank) alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D ABIS04_09835 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D ABIS04_12025 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D ABIS04_11560 bifunctional methionine sulfoxide reductase B/A protein K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D ABIS04_08770 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D ABIS04_08845 yghU; (GenBank) glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D ABIS04_06880 msrP; (GenBank) protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D ABIS04_10180 bcp; (GenBank) thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ABIS04_05485 tpx; (GenBank) thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ABIS04_02500 ahpC; (GenBank) alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D ABIS04_17240 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D ABIS04_15535 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D ABIS04_09065 hyaB; (GenBank) nickel-dependent hydrogenase large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1] D ABIS04_09070 hyaA; (GenBank) nickel-dependent hydrogenase small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1] D ABIS04_00890 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D ABIS04_03170 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D ABIS04_02930 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D ABIS04_17735 hmpA; (GenBank) NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D ABIS04_15555 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D ABIS04_07700 norW; (GenBank) NADH:flavorubredoxin reductase NorW K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D ABIS04_08235 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D ABIS04_07260 nrdG; (GenBank) anaerobic ribonucleoside-triphosphate reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D ABIS04_07035 pflA; (GenBank) pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D ABIS04_17290 hybrid-cluster NAD(P)-dependent oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D ABIS04_13925 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D ABIS04_04385 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D ABIS04_00390 coproporphyrinogen III oxidase family protein K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350] D ABIS04_03335 coproporphyrinogen III oxidase family protein K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350] D ABIS04_08405 coproporphyrinogen III oxidase family protein K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350] D ABIS04_17070 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D ABIS04_07055 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D ABIS04_03795 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D ABIS04_03365 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D ABIS04_13650 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D ABIS04_10735 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D ABIS04_06855 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D ABIS04_10740 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D ABIS04_12265 3-oxoacyl-ACP synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D ABIS04_01350 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D ABIS04_09885 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D ABIS04_12555 tRNA-uridine aminocarboxypropyltransferase K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D ABIS04_15135 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D ABIS04_13565 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D ABIS04_14395 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D ABIS04_10925 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D ABIS04_15760 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D ABIS04_01855 protein adenylyltransferase SelO K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D ABIS04_16765 protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1] D ABIS04_01545 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ABIS04_11725 ybgC; (GenBank) tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ABIS04_14085 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ABIS04_19240 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ABIS04_19250 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ABIS04_12150 CpsB/CapC family capsule biosynthesis tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D ABIS04_11870 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D ABIS04_06165 sixA; (GenBank) phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D ABIS04_06910 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D ABIS04_09080 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D ABIS04_03115 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D ABIS04_09170 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D ABIS04_10310 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D ABIS04_18995 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D ABIS04_12845 alkyl sulfatase dimerization domain-containing protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D ABIS04_02605 endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D ABIS04_13285 endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D ABIS04_13335 endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D ABIS04_02215 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D ABIS04_10665 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D ABIS04_14190 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D ABIS04_09925 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D ABIS04_16275 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D ABIS04_08415 glycoside hydrolase family 13 protein K21575 susA; neopullulanase [EC:3.2.1.135] D ABIS04_00120 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D ABIS04_15665 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D ABIS04_15195 acylase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97] D ABIS04_00385 yqfB; (GenBank) N(4)-acetylcytidine aminohydrolase K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D ABIS04_02750 CYTH domain-containing protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D ABIS04_11535 nucleoside triphosphate pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D ABIS04_06135 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ABIS04_06865 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ABIS04_12260 alpha/beta fold hydrolase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114] D ABIS04_02305 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D ABIS04_08755 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D ABIS04_04015 heparinase II/III family protein K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26] D ABIS04_01120 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D ABIS04_12255 oleC; (GenBank) olefin beta-lactone synthetase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1] D ABIS04_02970 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D ABIS04_11580 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D ABIS04_10385 rsxD; (GenBank) electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D ABIS04_10380 rsxC; (GenBank) electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D ABIS04_10375 rsxB; (GenBank) electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D ABIS04_03200 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D ABIS04_14425 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D ABIS04_03205 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D ABIS04_14420 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D ABIS04_03210 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D ABIS04_14415 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D ABIS04_03215 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D ABIS04_14410 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D ABIS04_03220 nqrE; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D ABIS04_14405 nqrE; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D ABIS04_03225 nqrF; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D ABIS04_14400 nqrF; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] C 99981 Carbohydrate metabolism D ABIS04_15835 sfsA; (GenBank) DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D ABIS04_10820 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D ABIS04_00270 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D ABIS04_08885 yfaE; (GenBank) class I ribonucleotide reductase maintenance protein YfaE K11107 yfaE; ferredoxin D ABIS04_10390 rsxG; (GenBank) electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D ABIS04_10395 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D ABIS04_10370 rsxA; (GenBank) electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D ABIS04_19580 mioC; (GenBank) FMN-binding protein MioC K06205 mioC; MioC protein D ABIS04_07350 iscU; (GenBank) Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D ABIS04_07705 norV; (GenBank) anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D ABIS04_06725 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD D ABIS04_12460 napF; (GenBank) ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D ABIS04_06720 periplasmic nitrate reductase, NapE protein K02571 napE; periplasmic nitrate reductase NapE D ABIS04_09940 fldA; (GenBank) flavodoxin FldA K03839 fldA; flavodoxin I D ABIS04_01230 NapC/NirT family cytochrome c K02569 napC; NapC/NirT family cytochrome c D ABIS04_06740 cytochrome c3 family protein K02569 napC; NapC/NirT family cytochrome c D ABIS04_02690 napG; (GenBank) ferredoxin-type protein NapG K02573 napG; ferredoxin-type protein NapG D ABIS04_02685 napH; (GenBank) quinol dehydrogenase ferredoxin subunit NapH K02574 napH; ferredoxin-type protein NapH D ABIS04_05715 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D ABIS04_02945 cytochrome c3 family protein K04013 nrfB; cytochrome c-type protein NrfB D ABIS04_02940 4Fe-4S dicluster domain-containing protein K04014 nrfC; protein NrfC D ABIS04_02935 nrfD; (GenBank) NrfD/PsrC family molybdoenzyme membrane anchor subunit K04015 nrfD; protein NrfD D ABIS04_14965 dodecin K09165 K09165; dodecin C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D ABIS04_07065 cysZ; (GenBank) sulfate transporter CysZ K06203 cysZ; CysZ protein D ABIS04_02920 VOC family protein K08234 yaeR; glyoxylase I family protein D ABIS04_05200 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D ABIS04_07915 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D ABIS04_12220 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ D ABIS04_08965 lipopolysaccharide assembly protein LapA domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A D ABIS04_08970 lapB; (GenBank) lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B D ABIS04_19070 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D ABIS04_02075 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein D ABIS04_02240 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D ABIS04_08565 AarF/UbiB family protein K03688 ubiB; ubiquinone biosynthesis protein D ABIS04_02245 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D ABIS04_01955 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism C 99999 Others D ABIS04_00895 DoxX family protein K15977 K15977; putative oxidoreductase D ABIS04_10980 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D ABIS04_09860 acetate--CoA ligase family protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D ABIS04_07960 cold-shock protein K03704 cspA; cold shock protein D ABIS04_10760 cspD; (GenBank) cold shock domain-containing protein CspD K03704 cspA; cold shock protein D ABIS04_15320 cold-shock protein K03704 cspA; cold shock protein D ABIS04_02275 rsd; (GenBank) sigma D regulator K07740 rsd; regulator of sigma D D ABIS04_15615 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D ABIS04_01070 Tex family protein K06959 tex; protein Tex C 99974 Translation D ABIS04_07575 rbbA; (GenBank) ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase D ABIS04_05385 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D ABIS04_17265 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D ABIS04_15525 META domain-containing protein K03668 hslJ; heat shock protein HslJ D ABIS04_10755 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D ABIS04_06550 tig; (GenBank) trigger factor K03545 tig; trigger factor D ABIS04_06885 msrQ; (GenBank) protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D ABIS04_13710 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D ABIS04_09035 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D ABIS04_09030 hypD; (GenBank) hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D ABIS04_09025 hypE; (GenBank) hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D ABIS04_09045 hypF; (GenBank) carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D ABIS04_01910 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D ABIS04_07910 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D ABIS04_17050 DsbA family protein K07396 K07396; putative protein-disulfide isomerase D ABIS04_01115 nfuA; (GenBank) Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D ABIS04_11955 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D ABIS04_10125 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D ABIS04_05615 xni; (GenBank) flap endonuclease Xni K01146 xni; protein Xni D ABIS04_00485 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC D ABIS04_06875 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D ABIS04_13415 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D ABIS04_01750 YraN family protein K07460 yraN; putative endonuclease D ABIS04_18380 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D ABIS04_00130 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein D ABIS04_08465 replication-associated recombination protein A K07478 ycaJ; putative ATPase D ABIS04_00140 topoisomerase DNA-binding C4 zinc finger domain-containing protein K07479 yrdD; putative DNA topoisomerase D ABIS04_13280 recombinase family protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D ABIS04_15345 transposase K07483 K07483; transposase D ABIS04_19445 IS66 family transposase K07484 K07484; transposase D ABIS04_07170 IS110 family transposase K07486 K07486; transposase D ABIS04_16295 tnpA; (GenBank) IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D ABIS04_10150 IS3 family transposase K07497 K07497; putative transposase D ABIS04_11555 IS3 family transposase K07497 K07497; putative transposase D ABIS04_15340 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D ABIS04_06625 pspA; (GenBank) phage shock protein PspA K03969 pspA; phage shock protein A D ABIS04_06070 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D ABIS04_07435 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D ABIS04_00330 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein D ABIS04_12510 glycoside-pentoside-hexuronide (GPH):cation symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D ABIS04_11195 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D ABIS04_08680 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D ABIS04_17355 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D ABIS04_05470 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D ABIS04_02760 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D ABIS04_15235 putP; (GenBank) sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D ABIS04_05010 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D ABIS04_10240 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D ABIS04_16920 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D ABIS04_15425 brnQ; (GenBank) branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D ABIS04_15110 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D ABIS04_14185 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D ABIS04_17695 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D ABIS04_11905 septation protein A K06190 ispZ; intracellular septation protein D ABIS04_18845 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility D ABIS04_15675 lpoB; (GenBank) penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D ABIS04_12825 syd; (GenBank) SecY-interacting protein K15723 syd; SecY interacting protein Syd C 99995 Signaling proteins D ABIS04_18145 ampE; (GenBank) beta-lactamase regulator AmpE K03807 ampE; AmpE protein D ABIS04_10625 proQ; (GenBank) RNA chaperone ProQ K03607 proQ; ProP effector D ABIS04_14480 universal stress protein K06149 uspA; universal stress protein A D ABIS04_05750 universal stress protein K14055 uspE; universal stress protein E D ABIS04_09480 uspE; (GenBank) universal stress protein UspE K14055 uspE; universal stress protein E D ABIS04_01450 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein D ABIS04_11025 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator D ABIS04_06925 CBS domain-containing protein K07168 K07168; CBS domain-containing membrane protein D ABIS04_03810 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D ABIS04_16780 PhoH family protein K07175 phoH2; PhoH-like ATPase D ABIS04_07510 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein D ABIS04_08690 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein D ABIS04_02765 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein D ABIS04_14155 AhpA/YtjB family protein K07186 smp; membrane protein D ABIS04_03940 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D ABIS04_08460 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D ABIS04_03885 lolB; (GenBank) lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB D ABIS04_05460 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D ABIS04_17775 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D ABIS04_10730 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D ABIS04_12680 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D ABIS04_13920 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD D ABIS04_14200 nlpI; (GenBank) lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D ABIS04_12420 ompW; (GenBank) outer membrane protein OmpW K07275 ompW; outer membrane protein D ABIS04_15475 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D ABIS04_16480 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D ABIS04_03980 YajG family lipoprotein K07286 yajG; uncharacterized lipoprotein D ABIS04_10560 AsmA family protein K07289 asmA; AsmA protein D ABIS04_16715 NfeD family protein K07340 ybbJ; inner membrane protein D ABIS04_07570 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D ABIS04_08670 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D ABIS04_17905 biotin/lipoyl-binding protein K01993 ABC-2.TX; HlyD family secretion protein D ABIS04_08645 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D ABIS04_14700 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D ABIS04_06710 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA D ABIS04_00690 ccmE; (GenBank) cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D ABIS04_00720 ccmI; (GenBank) c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D ABIS04_00735 nrfF; (GenBank) heme lyase NrfEFG subunit NrfF K02200 ccmH; cytochrome c-type biogenesis protein CcmH D ABIS04_13625 RodZ domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D ABIS04_12295 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D ABIS04_16090 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D ABIS04_00415 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D ABIS04_12575 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D ABIS04_17595 cutA; (GenBank) divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D ABIS04_04140 apaG; (GenBank) Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D ABIS04_02100 cyaY; (GenBank) iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D ABIS04_03700 helix-turn-helix transcriptional regulator K07219 K07219; putative molybdopterin biosynthesis protein D ABIS04_15035 imelysin family protein K07231 K07231; putative iron-regulated protein D ABIS04_04355 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D ABIS04_12085 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D ABIS04_09460 hypothetical protein K03796 bax; Bax protein D ABIS04_09465 glucosaminidase domain-containing protein K03796 bax; Bax protein D ABIS04_02410 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D ABIS04_18740 BON domain-containing protein K04065 osmY; hyperosmotically inducible periplasmic protein D ABIS04_09400 phosphatase K04477 ycdX; putative hydrolase D ABIS04_00155 group II truncated hemoglobin K06886 glbN; hemoglobin D ABIS04_05685 patatin-like phospholipase family protein K07001 K07001; NTE family protein D ABIS04_07250 rssA; (GenBank) patatin-like phospholipase RssA K07001 K07001; NTE family protein D ABIS04_18115 patatin-like phospholipase family protein K07001 K07001; NTE family protein D ABIS04_04620 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D ABIS04_01475 virulence factor BrkB family protein K07058 K07058; membrane protein D ABIS04_17590 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D ABIS04_03345 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D ABIS04_11305 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D ABIS04_10785 hflD; (GenBank) high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D ABIS04_19340 hypothetical protein K03744 lemA; LemA protein D ABIS04_15660 SlyX family protein K03745 slyX; SlyX protein D ABIS04_00135 DUF494 family protein K03747 smg; Smg protein D ABIS04_11295 CreA family protein K05805 creA; CreA protein D ABIS04_02610 SprT family zinc-dependent metalloprotease K02742 sprT; SprT protein D ABIS04_12090 SPOR domain-containing protein K03749 dedD; DedD protein D ABIS04_01705 AAA family ATPase K03112 damX; DamX protein D ABIS04_04340 DUF368 domain-containing protein K08974 K08974; putative membrane protein D ABIS04_14470 PH domain-containing protein K08981 K08981; putative membrane protein D ABIS04_01040 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein D ABIS04_02725 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein D ABIS04_06645 TIGR01620 family protein K08990 ycjF; putative membrane protein D ABIS04_01235 hypothetical protein K08993 yhhL; putative membrane protein D ABIS04_10060 YchJ family protein K09858 K09858; SEC-C motif domain protein D ABIS04_07320 phosphate-starvation-inducible PsiE family protein K13256 psiE; protein PsiE D ABIS04_13725 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA C 99997 Function unknown D ABIS04_19385 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein D ABIS04_06640 YcjX family protein K06918 K06918; uncharacterized protein D ABIS04_02860 DUF134 domain-containing protein K06933 K06933; uncharacterized protein D ABIS04_09705 DUF134 domain-containing protein K06933 K06933; uncharacterized protein D ABIS04_07775 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D ABIS04_12275 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D ABIS04_14495 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D ABIS04_06760 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D ABIS04_09180 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D ABIS04_18830 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D ABIS04_04375 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D ABIS04_19245 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein D ABIS04_02565 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D ABIS04_12890 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D ABIS04_02635 C39 family peptidase K06992 K06992; uncharacterized protein D ABIS04_04415 cupin domain-containing protein K06995 K06995; uncharacterized protein D ABIS04_01205 VOC family protein K06996 K06996; uncharacterized protein D ABIS04_07770 VOC family protein K06996 K06996; uncharacterized protein D ABIS04_16110 YqiA/YcfP family alpha/beta fold hydrolase K07000 K07000; uncharacterized protein D ABIS04_10590 MMPL family transporter K07003 K07003; uncharacterized protein D ABIS04_06950 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein D ABIS04_15900 hydrolase K07019 K07019; uncharacterized protein D ABIS04_05585 alpha/beta family hydrolase K07020 K07020; uncharacterized protein D ABIS04_15875 YheV family putative zinc ribbon protein K07070 K07070; uncharacterized protein D ABIS04_06700 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D ABIS04_17040 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D ABIS04_15755 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D ABIS04_02375 permease K07089 K07089; uncharacterized protein D ABIS04_06305 permease K07089 K07089; uncharacterized protein D ABIS04_08100 permease K07089 K07089; uncharacterized protein D ABIS04_17390 permease K07089 K07089; uncharacterized protein D ABIS04_01055 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ABIS04_04780 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ABIS04_06415 TSUP family transporter K07090 K07090; uncharacterized protein D ABIS04_07125 TSUP family transporter K07090 K07090; uncharacterized protein D ABIS04_09670 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ABIS04_16985 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ABIS04_17400 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D ABIS04_02915 PhoX family phosphatase K07093 K07093; uncharacterized protein D ABIS04_15005 phosphoribosyltransferase family protein K07101 K07101; uncharacterized protein D ABIS04_08535 YeeE/YedE family protein K07112 K07112; uncharacterized protein D ABIS04_01755 penicillin-binding protein activator K07121 K07121; uncharacterized protein D ABIS04_01805 MAPEG family protein K07136 K07136; uncharacterized protein D ABIS04_09310 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D ABIS04_04745 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D ABIS04_04320 DUF418 domain-containing protein K07148 K07148; uncharacterized protein D ABIS04_11015 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D ABIS04_19615 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D ABIS04_04535 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D ABIS04_05185 yggU; (GenBank) DUF167 family protein YggU K09131 K09131; uncharacterized protein D ABIS04_03725 ybeD; (GenBank) DUF493 family protein YbeD K09158 K09158; uncharacterized protein D ABIS04_08185 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D ABIS04_14465 PH domain-containing protein K09167 K09167; uncharacterized protein D ABIS04_04380 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D ABIS04_02580 FapA family protein K09749 K09749; uncharacterized protein D ABIS04_08005 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D ABIS04_11910 YciI family protein K09780 K09780; uncharacterized protein D ABIS04_08330 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D ABIS04_07420 YbaN family protein K09790 K09790; uncharacterized protein D ABIS04_11210 Trm112 family protein K09791 K09791; uncharacterized protein D ABIS04_09490 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D ABIS04_19215 YdcH family protein K09794 K09794; uncharacterized protein D ABIS04_10940 SIMPL domain-containing protein K09797 K09797; uncharacterized protein D ABIS04_18840 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D ABIS04_13700 RnfH family protein K09801 K09801; uncharacterized protein D ABIS04_15125 oxidative stress defense protein K09807 K09807; uncharacterized protein D ABIS04_03950 nqrM; (GenBank) (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein D ABIS04_14390 nqrM; (GenBank) (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein D ABIS04_07980 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein D ABIS04_15670 hypothetical protein K09859 K09859; uncharacterized protein D ABIS04_05015 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein D ABIS04_18190 yacG; (GenBank) DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D ABIS04_13985 YjaG family protein K09891 K09891; uncharacterized protein D ABIS04_19170 yihI; (GenBank) Der GTPase-activating protein YihI K09894 K09894; uncharacterized protein D ABIS04_03455 UPF0149 family protein K09895 K09895; uncharacterized protein D ABIS04_11595 DUF413 domain-containing protein K09897 K09897; uncharacterized protein D ABIS04_15905 YheU family protein K09898 K09898; uncharacterized protein D ABIS04_07030 yfbV; (GenBank) terminus macrodomain insulation protein YfbV K09899 K09899; uncharacterized protein D ABIS04_08175 YcgL domain-containing protein K09902 K09902; uncharacterized protein D ABIS04_06955 YejL family protein K09904 K09904; uncharacterized protein D ABIS04_07720 VOC family protein K09907 K09907; uncharacterized protein D ABIS04_06405 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein D ABIS04_15145 DUF2057 domain-containing protein K09909 K09909; uncharacterized protein D ABIS04_15640 YacL family protein K09910 K09910; uncharacterized protein D ABIS04_08985 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D ABIS04_07975 YceH family protein K09915 K09915; uncharacterized protein D ABIS04_08825 DUF1315 family protein K09916 K09916; uncharacterized protein D ABIS04_10635 YebG family protein K09918 K09918; uncharacterized protein D ABIS04_11070 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D ABIS04_16120 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein D ABIS04_02120 DUF484 family protein K09921 K09921; uncharacterized protein D ABIS04_05145 YggL family protein K09923 K09923; uncharacterized protein D ABIS04_09505 FixH family protein K09926 K09926; uncharacterized protein D ABIS04_11230 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D ABIS04_07415 putative DNA-binding domain-containing protein K09929 K09929; uncharacterized protein D ABIS04_07410 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D ABIS04_14660 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D ABIS04_16510 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D ABIS04_08220 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein D ABIS04_12335 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D ABIS04_13655 DUF3820 family protein K09954 K09954; uncharacterized protein D ABIS04_12425 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein D ABIS04_07790 ACT domain-containing protein K09964 K09964; uncharacterized protein D ABIS04_16865 TraB/GumN family protein K09973 K09973; uncharacterized protein D ABIS04_07925 YdbL family protein K09978 K09978; uncharacterized protein D ABIS04_15780 DUF2170 family protein K09980 K09980; uncharacterized protein D ABIS04_17485 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D ABIS04_10910 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D ABIS04_09300 VWA domain-containing protein K09989 K09989; uncharacterized protein D ABIS04_02755 TIGR00153 family protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 17, 2025