+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Shewanella sp. JNE2

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ACRISPR-Cas system B Universal Cas proteins C MZ182_09185 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 C MZ182_12875 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1 C MZ182_12870 cas2e; type I-E CRISPR-associated endoribonuclease Cas2e K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D MZ182_09190 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors D MZ182_12885 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors D MZ182_09195 csy1; type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D MZ182_09200 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D MZ182_09205 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D MZ182_09210 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C MZ182_07345 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C MZ182_09120 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C MZ182_18265 hsdR; type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C MZ182_07335 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C MZ182_09100 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C MZ182_18275 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D MZ182_19220 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D MZ182_21055 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D MZ182_20775 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C MZ182_15245 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D MZ182_13005 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB D MZ182_12950 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D MZ182_12985 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D MZ182_13210 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB D MZ182_07295 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D MZ182_07290 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B C CcdB-CcdA D MZ182_12955 CcdB family protein K19163 ccdB; toxin CcdB D MZ182_12960 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA C ParE-ParD D MZ182_01430 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D MZ182_13175 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D MZ182_13250 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D MZ182_13180 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D MZ182_09085 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein C HigB-HigA D MZ182_15190 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D MZ182_15195 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D MZ182_01815 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MZ182_02535 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D MZ182_03520 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MZ182_03510 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MZ182_12640 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D MZ182_05475 hypothetical protein K19168 cptA; toxin CptA D MZ182_05470 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C MZ182_10765 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C MZ182_21075 phosphoadenosine phosphosulfate reductase K19170 dndC; DNA sulfur modification protein DndC B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023