+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Shewanella sp. JNE2
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ACRISPR-Cas system
B Universal Cas proteins
C MZ182_09185 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1
C MZ182_12875 cas1e; type I-E CRISPR-associated endonuclease Cas1e K15342 cas1; CRISP-associated protein Cas1
C MZ182_12870 cas2e; type I-E CRISPR-associated endoribonuclease Cas2e K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D MZ182_09190 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D MZ182_12885 cas6e; type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
D MZ182_09195 csy1; type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1
D MZ182_09200 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D MZ182_09205 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D MZ182_09210 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C MZ182_07345 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C MZ182_09120 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C MZ182_18265 hsdR; type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C MZ182_07335 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C MZ182_09100 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C MZ182_18275 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D MZ182_19220 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D MZ182_21055 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D MZ182_20775 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
C MZ182_15245 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D MZ182_13005 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
D MZ182_12950 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D MZ182_12985 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D MZ182_13210 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
D MZ182_07295 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D MZ182_07290 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
C CcdB-CcdA
D MZ182_12955 CcdB family protein K19163 ccdB; toxin CcdB
D MZ182_12960 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA
C ParE-ParD
D MZ182_01430 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D MZ182_13175 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D MZ182_13250 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D MZ182_13180 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D MZ182_09085 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
C HigB-HigA
D MZ182_15190 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1
D MZ182_15195 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D MZ182_01815 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D MZ182_02535 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D MZ182_03520 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D MZ182_03510 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D MZ182_12640 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D MZ182_05475 hypothetical protein K19168 cptA; toxin CptA
D MZ182_05470 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C MZ182_10765 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C MZ182_21075 phosphoadenosine phosphosulfate reductase K19170 dndC; DNA sulfur modification protein DndC
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023