+D GENES KO
#
KEGG Orthology (KO) - Slackia heliotrinireducens
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:shi00010]
D Shel_19960 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Shel_00480 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Shel_17320 uncharacterized conserved protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Shel_19790 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Shel_10130 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Shel_10110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Shel_10120 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Shel_06510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Shel_19670 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Shel_11050 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_08510 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Shel_17590 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Shel_17600 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Shel_00970 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Shel_17330 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_17560 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_01140 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_23220 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Shel_02560 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:shi00020]
D Shel_28210 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Shel_08420 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Shel_06080 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_17590 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Shel_17600 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Shel_17610 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Shel_17580 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Shel_03870 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Shel_03880 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26920 heterodisulfide reductase, subunit B K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Shel_16210 hydro-lyase, Fe-S type, tartrate/fumarate subfamily K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Shel_26960 fumarase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Shel_26950 hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Shel_16200 tartrate dehydratase beta subunit/fumarate hydratase class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Shel_02560 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Shel_08510 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:shi00030]
D Shel_00480 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Shel_09930 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Shel_09030 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Shel_09040 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Shel_23680 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Shel_21560 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Shel_23220 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Shel_21930 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Shel_24640 phenylacetaldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Shel_04450 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Shel_19790 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Shel_17320 uncharacterized conserved protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:shi00040]
D Shel_24960 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Shel_09930 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Shel_14560 theronine dehydrogenase-like Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D Shel_14630 theronine dehydrogenase-like Zn-dependent dehydrogenase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D Shel_14620 4-diphosphocytidyl-2-methyl-D-erythritol synthase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
D Shel_14570 4-diphosphocytidyl-2-methyl-D-erythritol synthase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:shi00051]
D Shel_17320 uncharacterized conserved protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Shel_13290 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Shel_14560 theronine dehydrogenase-like Zn-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D Shel_19790 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Shel_10130 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Shel_21560 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Shel_13280 PTS system D-fructose-specific IIA component (F1P-forming)/PTS system D-fructose-specific IIB component (F1P-forming)/PTS system D-fructose-specific IIC component (F1P-forming) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:shi00052]
D Shel_06460 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Shel_06450 galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Shel_27450 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Shel_23220 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Shel_19960 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Shel_14770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Shel_06470 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Shel_14550 predicted tagatose 6-phosphate kinase K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
C 00053 Ascorbate and aldarate metabolism
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:shi00500]
D Shel_17700 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Shel_17050 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Shel_17060 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Shel_17040 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Shel_17070 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Shel_17030 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Shel_23220 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Shel_19960 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Shel_00480 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:shi00520]
D Shel_22490 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Shel_08060 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Shel_00160 6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Shel_26700 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Shel_21950 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Shel_21940 UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Shel_15170 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Shel_15080 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Shel_08870 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Shel_19960 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Shel_23220 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Shel_06460 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Shel_06450 galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Shel_27450 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Shel_14770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Shel_00480 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Shel_17050 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Shel_17060 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:shi00620]
D Shel_17330 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_17560 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_01140 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_08510 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Shel_17590 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Shel_17600 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_00970 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Shel_12210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_25160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_12240 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_11220 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_01130 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Shel_01090 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Shel_07980 biotin carboxylase/acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01110 acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01120 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Shel_12710 FAD/FMN-dependent dehydrogenase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D Shel_05560 lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D Shel_10470 lactoylglutathione lyase-like lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Shel_22660 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Shel_25370 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Shel_26900 uncharacterized conserved protein K22373 larA; lactate racemase [EC:5.1.2.1]
D Shel_05030 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Shel_07970 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Shel_16210 hydro-lyase, Fe-S type, tartrate/fumarate subfamily K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Shel_26960 fumarase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Shel_26950 hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Shel_16200 tartrate dehydratase beta subunit/fumarate hydratase class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Shel_02560 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Shel_11050 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Shel_17160 isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:shi00630]
D Shel_17330 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_17560 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_01140 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_28210 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Shel_08420 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Shel_20950 haloacid dehalogenase superfamily enzyme, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Shel_07130 predicted phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Shel_00150 haloacid dehalogenase superfamily enzyme, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Shel_19880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_19890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_21550 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_24350 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Shel_05560 lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D Shel_21840 uncharacterized anaerobic dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Shel_21850 anaerobic dehydrogenase, typically selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Shel_21830 Fe-S-cluster-containing hydrogenase subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Shel_21820 cytochrome b subunit of formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:shi00640]
D Shel_17330 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_17560 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_01140 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_12210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_25160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_12240 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_11220 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_01130 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Shel_01090 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Shel_07980 biotin carboxylase/acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01110 acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01120 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
C 00650 Butanoate metabolism [PATH:shi00650]
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Shel_03870 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Shel_03880 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26920 heterodisulfide reductase, subunit B K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Shel_08510 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Shel_17590 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Shel_17600 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Shel_01970 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Shel_01980 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism
D Shel_01970 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Shel_01980 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00562 Inositol phosphate metabolism
D Shel_10130 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:shi00190]
D Shel_24660 NADH:ubiquinone oxidoreductase 24 kD subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Shel_24670 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Shel_03870 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Shel_03880 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26920 heterodisulfide reductase, subunit B K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Shel_00170 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Shel_00180 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Shel_21420 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Shel_21400 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Shel_21410 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Shel_21430 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Shel_21390 F0F1-type ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Shel_21460 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Shel_21440 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Shel_21450 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Shel_16310 inorganic pyrophosphatase/exopolyphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D Shel_14830 haloacid dehalogenase superfamily enzyme, subfamily IA K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
D Shel_01710 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:shi00710]
D Shel_10120 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Shel_10110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Shel_17320 uncharacterized conserved protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Shel_09030 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Shel_09040 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Shel_21560 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Shel_10130 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Shel_09930 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Shel_23680 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Shel_02560 ATP-dependent phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Shel_11050 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:shi00720]
D Shel_08510 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Shel_11050 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Shel_16210 hydro-lyase, Fe-S type, tartrate/fumarate subfamily K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Shel_26960 fumarase alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Shel_26950 hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Shel_16200 tartrate dehydratase beta subunit/fumarate hydratase class I K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Shel_03870 succinate dehydrogenase/fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Shel_03880 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26930 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Shel_26920 heterodisulfide reductase, subunit B K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Shel_17590 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Shel_17600 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Shel_17610 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Shel_17580 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Shel_06080 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Shel_08420 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Shel_01130 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Shel_01090 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Shel_07980 biotin carboxylase/acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01110 acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01120 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Shel_24910 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Shel_20990 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Shel_24890 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Shel_20930 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Shel_20940 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Shel_24900 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Shel_23510 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Shel_12240 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_11220 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_12210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_25160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_17330 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_17560 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_01140 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:shi00680]
D Shel_21840 uncharacterized anaerobic dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Shel_21850 anaerobic dehydrogenase, typically selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Shel_21830 Fe-S-cluster-containing hydrogenase subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Shel_21820 cytochrome b subunit of formate dehydrogenase K00127 fdoI; formate dehydrogenase subunit gamma
D Shel_21550 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Shel_19670 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Shel_19790 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Shel_17320 uncharacterized conserved protein K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Shel_17770 polyferredoxin, heterodixulfide reductase subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Shel_17760 heterodisulfide reductase, subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Shel_17750 hypothetical protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Shel_17780 coenzyme F420-reducing hydrogenase, delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D Shel_12210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_25160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_12240 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_11220 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_17330 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_17560 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_01140 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_06510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Shel_28220 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Shel_28230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Shel_24420 phosphoserine phosphatase/homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D Shel_19540 predicted cobalamin binding protein K16179 mtbC; dimethylamine corrinoid protein
D Shel_25850 predicted cobalamin binding protein K16179 mtbC; dimethylamine corrinoid protein
C 00910 Nitrogen metabolism [PATH:shi00910]
D Shel_07590 anaerobic dehydrogenase, typically selenocysteine-containing K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D Shel_07600 hypothetical protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D Shel_08100 formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D Shel_28240 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Shel_10490 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Shel_19880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_19890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_00850 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_02380 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_12560 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_05980 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_09780 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:shi00920]
D Shel_09380 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Shel_22740 anaerobic dehydrogenase, typically selenocysteine-containing K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D Shel_22670 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Shel_04800 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Shel_22690 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Shel_15020 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Shel_07940 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_22240 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_17920 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_02420 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_02110 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_27670 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_27730 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_24570 Fe-S-cluster-containing hydrogenase subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D Shel_27680 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_02120 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_27740 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_02410 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_07930 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_27690 polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D Shel_02130 polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:shi00061]
D Shel_01130 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Shel_01090 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Shel_07980 biotin carboxylase/acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01110 acetyl/propionyl-CoA carboxylase, alpha subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Shel_01120 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Shel_23640 phosphopantetheine-containing protein K02078 acpP; acyl carrier protein
D Shel_01040 acyl carrier protein K02078 acpP; acyl carrier protein
D Shel_11200 hypothetical protein K02078 acpP; acyl carrier protein
D Shel_01060 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Shel_01080 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Shel_01070 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Shel_01100 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Shel_04180 2-nitropropane dioxygenase-like enzyme K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Shel_01050 2-nitropropane dioxygenase-like enzyme K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Shel_03920 2-nitropropane dioxygenase-like enzyme K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Shel_23800 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation [PATH:shi00062]
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00071 Fatty acid degradation [PATH:shi00071]
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Shel_23800 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Shel_00970 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:shi00121]
D Shel_12270 penicillin V acylase-like amidase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:shi00561]
D Shel_24350 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Shel_21570 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Shel_10060 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Shel_09710 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Shel_09670 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Shel_04570 phosphoglycerol transferase family protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D Shel_06470 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:shi00564]
D Shel_09720 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Shel_06270 predicted dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Shel_09710 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Shel_09670 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Shel_14660 Glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D Shel_23590 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Shel_13400 phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:shi00600]
D Shel_06470 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:shi00230]
D Shel_26230 Zn-finger containing NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Shel_23220 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Shel_21930 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Shel_06330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Shel_01750 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Shel_27830 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Shel_01770 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Shel_06520 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Shel_01760 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Shel_27510 phosphoribosylaminoimidazole carboxylase, PurE protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Shel_00350 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Shel_00300 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Shel_23860 AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Shel_23870 IMP cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D Shel_04860 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Shel_08900 uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Shel_02020 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Shel_06740 IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Shel_09200 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Shel_09130 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Shel_17850 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Shel_19190 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Shel_16720 GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Shel_11910 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Shel_04760 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Shel_18290 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Shel_27460 dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Shel_21900 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Shel_19640 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Shel_23940 uncharacterized conserved protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D Shel_27840 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Shel_23240 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Shel_00850 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_02380 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_12560 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_05980 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:shi00240]
D Shel_13230 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Shel_13220 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Shel_11850 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Shel_11860 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Shel_11880 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Shel_11870 2-polyprenylphenol hydroxylase-like oxidoreductase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Shel_09750 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Shel_11890 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Shel_23620 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Shel_09200 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Shel_05420 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Shel_08750 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Shel_09660 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Shel_04610 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Shel_11840 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Shel_04760 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Shel_18290 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Shel_21480 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Shel_16190 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Shel_10830 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Shel_20020 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:shi00250]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_05280 L-asparaginase type I family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Shel_24030 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Shel_16560 L-aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Shel_26590 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Shel_26580 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Shel_27840 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Shel_00300 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Shel_11850 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Shel_10490 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Shel_19880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_19890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_13230 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Shel_13220 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Shel_25660 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Shel_26700 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Shel_06330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Shel_01750 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:shi00260]
D Shel_16060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Shel_16050 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Shel_26330 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Shel_16080 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Shel_24420 phosphoserine phosphatase/homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D Shel_16070 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Shel_08120 L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Shel_21550 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Shel_24350 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Shel_06510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Shel_28220 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Shel_28230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_16320 L-serine dehydratase, iron-sulfur-dependent, alpha subunit/L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Shel_00500 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:shi00270]
D Shel_22670 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Shel_04800 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Shel_22690 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Shel_10650 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Shel_23490 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Shel_14800 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Shel_09870 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Shel_27620 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Shel_06540 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Shel_17250 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Shel_08900 uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Shel_17490 cytosine deaminase-like metal-dependent hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Shel_01530 cytosine deaminase-like metal-dependent hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Shel_27220 cystathionine beta-lyase/cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Shel_17500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Shel_16060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Shel_16050 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Shel_26330 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Shel_15020 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Shel_15030 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Shel_04850 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Shel_12950 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Shel_04720 gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_16320 L-serine dehydratase, iron-sulfur-dependent, alpha subunit/L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Shel_28220 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Shel_28230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:shi00280]
D Shel_12950 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:shi00290]
D Shel_01970 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Shel_01980 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Shel_12950 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Shel_16560 L-aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Shel_17160 isopropylmalate/homocitrate/citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:shi00300]
D Shel_26330 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Shel_16060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Shel_16050 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Shel_28170 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Shel_28160 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Shel_22030 ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Shel_02210 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Shel_28180 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Shel_17190 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Shel_28150 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D Shel_08810 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:shi00310]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Shel_12260 KamA family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:shi00220]
D Shel_00840 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Shel_02370 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Shel_26590 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Shel_26580 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Shel_22360 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Shel_07960 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Shel_02360 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D Shel_25660 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Shel_19880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_19890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_13230 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Shel_13220 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Shel_00850 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_02380 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_12560 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_05980 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Shel_10490 glutamate dehydrogenase (NADP) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_16560 L-aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Shel_22010 glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Shel_16600 N-acetylglutamate synthase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D Shel_22020 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Shel_22000 N-acetyl-gamma-glutamyl-phosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Shel_22030 ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:shi00330]
D Shel_27620 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Shel_06540 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Shel_23480 predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Shel_16300 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Shel_13030 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Shel_19350 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Shel_11350 proline-specific peptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Shel_24200 proline-specific peptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:shi00340]
D Shel_15290 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Shel_15220 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Shel_15240 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Shel_15250 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Shel_15230 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Shel_15260 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Shel_05350 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_15270 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_15210 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Shel_15280 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:shi00350]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_05350 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_15270 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_00970 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:shi00360]
D Shel_27480 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Shel_13410 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Shel_06240 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Shel_04930 uncharacterized conserved protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Shel_04950 uncharacterized protein, possibly involved in aromatic compounds catabolism K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_05350 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_15270 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_23480 predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:shi00380]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Shel_23480 predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:shi00400]
D Shel_10200 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Shel_10210 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Shel_19790 fructose-bisphosphate aldolase K16305 K16305; fructose-bisphosphate aldolase / 6-deoxy-5-ketofructose 1-phosphate synthase [EC:4.1.2.13 2.2.1.11]
D Shel_06550 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D Shel_06600 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Shel_07850 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Shel_09650 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Shel_07840 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Shel_10150 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Shel_00500 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Shel_10160 monofunctional chorismate mutase, clade 2 K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Shel_10140 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_05350 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_15270 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00430 Taurine and hypotaurine metabolism [PATH:shi00430]
D Shel_12240 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_11220 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Shel_12210 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Shel_25160 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D Shel_14660 Glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
C 00450 Selenocompound metabolism [PATH:shi00450]
D Shel_10650 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Shel_23490 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Shel_14800 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Shel_27220 cystathionine beta-lyase/cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Shel_26810 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Shel_25100 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Shel_25220 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Shel_18300 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Shel_04310 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9]
D Shel_25360 selenium donor protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Shel_25310 seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Shel_07450 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Shel_22990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:shi00460]
D Shel_17700 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Shel_05280 L-asparaginase type I family protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Shel_24030 aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Shel_21550 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:shi00470]
D Shel_07700 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Shel_28460 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Shel_25610 amino acid adenylation enzyme/thioester reductase family protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Shel_25660 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Shel_09110 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Shel_08830 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Shel_28180 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Shel_17190 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:shi00480]
D Shel_04720 gamma-glutamylcysteine synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Shel_06080 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Shel_20790 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D Shel_27620 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Shel_06540 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:shi00542]
D Shel_14670 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:shi00541]
D Shel_27450 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Shel_14770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Shel_14400 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Shel_14390 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Shel_11820 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Shel_14360 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D Shel_21940 UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:shi00550]
D Shel_15170 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Shel_15080 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Shel_08870 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Shel_08860 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Shel_08830 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Shel_28460 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Shel_08810 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Shel_10350 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D Shel_23600 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Shel_16350 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Shel_08820 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Shel_08850 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Shel_08350 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Shel_14210 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Shel_08800 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Shel_13430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Shel_05720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_18330 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_17860 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:shi00552]
D Shel_16350 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Shel_14670 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Shel_14710 glycosyl/glycerophosphate transferase, teichoic acid biosynthesis K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D Shel_14750 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D Shel_25610 amino acid adenylation enzyme/thioester reductase family protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Shel_01960 cell envelope-related function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Shel_01950 cell envelope-related function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Shel_12750 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Shel_15160 cell envelope-related function transcriptional attenuator common domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Shel_14640 glycosyl/glycerophosphate transferase, teichoic acid biosynthesis K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D Shel_14500 glycosyl/glycerophosphate transferase, teichoic acid biosynthesis K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D Shel_04570 phosphoglycerol transferase family protein, alkaline phosphatase superfamily K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D Shel_12330 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D Shel_12380 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:shi00543]
D Shel_14670 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Shel_14610 predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Shel_17220 predicted membrane protein involved in D-alanine export K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Shel_22670 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:shi00730]
D Shel_09940 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Shel_11930 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Shel_16500 iron-only hydrogenase maturation protein HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Shel_08020 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Shel_01420 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Shel_08960 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Shel_23240 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:shi00740]
D Shel_07110 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Shel_07090 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Shel_07120 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Shel_07100 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Shel_09400 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Shel_26230 Zn-finger containing NTP pyrophosphohydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:shi00750]
D Shel_26290 pyridoxal/pyridoxine/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Shel_18160 predicted oxidoreductase, aryl-alcohol dehydrogenase like protein K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D Shel_28230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Shel_16070 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:shi00760]
D Shel_16160 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Shel_13040 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Shel_19860 Zn-finger containing NTP pyrophosphohydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Shel_19800 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Shel_26850 NAD-dependent protein deacetylase, SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Shel_08740 predicted sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Shel_24210 NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Shel_24220 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:shi00770]
D Shel_01970 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Shel_01980 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Shel_24940 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Shel_16020 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Shel_23250 transcriptional activator, putative, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Shel_13240 phosphopantothenoylcysteine synthetase/decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D Shel_23260 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Shel_10020 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Shel_19970 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Shel_26690 phosphopantethiene--protein transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Shel_12950 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:shi00780]
D Shel_01080 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Shel_01070 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Shel_01100 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Shel_16510 iron-only hydrogenase maturation protein HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D Shel_02060 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:shi00785]
D Shel_13820 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00790 Folate biosynthesis [PATH:shi00790]
D Shel_24880 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Shel_20920 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Shel_27090 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Shel_02040 dihydropteroate synthase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Shel_07720 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Shel_07110 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Shel_22460 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Shel_22450 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Shel_01630 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Shel_01640 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Shel_01670 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Shel_24590 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Shel_24600 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Shel_01680 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Shel_26610 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Shel_01580 molybdopterin-guanine dinucleotide biosynthesis protein MobB K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:shi00670]
D Shel_24910 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Shel_20990 Formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Shel_24890 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Shel_20930 methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Shel_20940 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Shel_24900 methenyl tetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Shel_21550 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Shel_01770 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Shel_23860 AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Shel_09900 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Shel_23490 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Shel_14800 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Shel_20020 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Shel_23510 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Shel_24120 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:shi00860]
D Shel_13470 glutamyl-or glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_09840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_11600 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Shel_11660 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Shel_11640 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Shel_11610 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Shel_25860 uroporphyrinogen-III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Shel_27010 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Shel_11620 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Shel_11590 siroheme synthase, N-terminal domain protein K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Shel_11630 predicted Fe-S oxidoreductase K22226 ahbC; Fe-coproporphyrin III synthase
D Shel_11650 predicted Fe-S oxidoreductase K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D Shel_24820 cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Shel_24480 cobalamin biosynthesis protein CbiK, Co2+ chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Shel_24850 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Shel_21210 precorrin-4 C11-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D Shel_21200 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Shel_21220 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Shel_21190 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Shel_21130 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Shel_21180 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)/cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Shel_21140 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Shel_21170 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Shel_21110 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Shel_21090 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Shel_21100 cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Shel_21120 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Shel_21080 fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Shel_21150 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Shel_13860 protoporphyrin IX magnesium-chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Shel_03850 bacterioferritin (cytochrome b1) K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:shi00130]
D Shel_01520 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Shel_04130 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D Shel_04140 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D Shel_06440 uncharacterized conserved protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Shel_13490 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:shi00900]
D Shel_08020 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Shel_23580 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Shel_19470 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Shel_12390 4-diphosphocytidyl-2-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Shel_00140 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Shel_19460 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Shel_23560 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Shel_09680 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Shel_24100 isopentenyl-diphosphate delta-isomerase, type 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Shel_19620 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Shel_23600 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:shi00903]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Shel_04150 esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Shel_09030 transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Shel_09040 transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:shi00523]
D Shel_14400 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Shel_14390 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Shel_11820 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Shel_14390 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:shi00946]
D Shel_17700 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:shi00332]
D Shel_13030 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Shel_19350 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:shi00261]
D Shel_16060 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Shel_16050 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Shel_28170 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Shel_28160 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:shi00521]
D Shel_19960 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Shel_23220 phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Shel_14400 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Shel_14390 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Shel_11820 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Shel_19960 transcriptional regulator/sugar kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:shi00525]
D Shel_14400 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Shel_14390 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:shi00401]
D Shel_10140 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_05350 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_15270 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D Shel_01060 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Shel_01070 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Shel_23640 phosphopantetheine-containing protein K02078 acpP; acyl carrier protein
D Shel_01040 acyl carrier protein K02078 acpP; acyl carrier protein
D Shel_11200 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:shi00999]
D Shel_09870 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Shel_17700 beta-glucosidase-like glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D Shel_01020 uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation
D Shel_23480 predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:shi00625]
D Shel_00970 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Shel_24180 NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D Shel_12900 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:shi00643]
D Shel_23480 predicted acetamidase/formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:shi00930]
D Shel_04150 esterase/lipase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D Shel_02640 3-hydroxyacyl-CoA dehydrogenase K00022 HADH; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:shi00626]
D Shel_00970 Zn-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D Shel_26990 succinate dehydrogenase/fumarate reductase flavoprotein subunit K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D Shel_13870 succinate dehydrogenase/fumarate reductase flavoprotein subunit K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:shi03020]
D Shel_19910 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Shel_19900 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Shel_19710 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Shel_11920 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:shi03010]
D Shel_19980 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Shel_08130 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Shel_23410 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Shel_19720 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Shel_23300 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Shel_27920 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Shel_16270 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Shel_23330 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Shel_21980 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Shel_16250 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Shel_19730 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Shel_16280 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Shel_19740 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Shel_23340 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Shel_10950 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Shel_10970 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Shel_23380 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Shel_27900 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Shel_23430 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Shel_10270 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Shel_08710 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Shel_23440 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Shel_16240 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Shel_16230 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Shel_23350 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Shel_23320 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Shel_08450 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Shel_27890 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Shel_08440 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Shel_08700 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Shel_21990 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Shel_23370 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Shel_23280 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Shel_23400 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Shel_19700 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Shel_23310 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Shel_10370 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Shel_15180 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Shel_13000 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Shel_23420 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Shel_16220 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Shel_23360 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Shel_13010 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Shel_09970 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Shel_23390 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Shel_23290 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Shel_04660 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Shel_08660 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Shel_28540 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Shel_15190 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Shel_19750 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Shel_01550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Shel_08380 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Shel_01560 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Shel_08390 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Shel_R0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Shel_R0002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:shi00970]
D Shel_07560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Shel_08330 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Shel_28340 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Shel_00070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_13110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_27110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_09170 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_09540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Shel_13730 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Shel_14160 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Shel_11970 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Shel_26560 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Shel_08970 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Shel_11670 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Shel_08470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Shel_08980 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Shel_11950 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_11980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_09150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_28400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_13120 tRNA-His K14226 tRNA-His; tRNA His
D Shel_28350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Shel_11710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_26300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_19630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_10180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_02220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_26570 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Shel_13130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Shel_08640 tRNA-Met K14230 tRNA-Met; tRNA Met
D Shel_09430 tRNA-Met K14230 tRNA-Met; tRNA Met
D Shel_26130 tRNA-Met K14230 tRNA-Met; tRNA Met
D Shel_27710 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Shel_09740 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Shel_09140 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Shel_19520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Shel_27990 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_28090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_27960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_27540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_15370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Shel_26520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Shel_08630 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Shel_08670 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Shel_08620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Shel_11940 tRNA-Val K14237 tRNA-Val; tRNA Val
D Shel_09530 tRNA-Val K14237 tRNA-Val; tRNA Val
D Shel_20650 tRNA-Val K14237 tRNA-Val; tRNA Val
D Shel_13470 glutamyl-or glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_09840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_21770 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Shel_21760 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Shel_21780 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Shel_07800 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Shel_20670 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Shel_04580 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Shel_11020 glycyl-tRNA synthetase, tetrameric type, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Shel_11030 glycyl-tRNA synthetase, tetrameric type, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Shel_16370 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Shel_26270 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Shel_25310 seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Shel_19450 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Shel_07450 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Shel_22990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Shel_09900 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Shel_11750 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Shel_06780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Shel_10880 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Shel_19490 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Shel_01700 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Shel_23550 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Shel_20680 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Shel_04680 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Shel_04690 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Shel_08370 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Shel_14880 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:shi03060]
D Shel_23270 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Shel_08680 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Shel_10170 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Shel_07200 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Shel_28520 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Shel_09010 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Shel_10100 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Shel_02310 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D Shel_10090 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Shel_13320 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Shel_19510 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Shel_19830 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D Shel_11010 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Shel_00420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Shel_10890 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:shi04122]
D Shel_09940 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Shel_04360 predicted redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Shel_25120 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Shel_04820 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Shel_01630 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Shel_24650 MoaD family protein K03636 moaD; sulfur-carrier protein
D Shel_04460 hypothetical protein K03636 moaD; sulfur-carrier protein
D Shel_24690 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Shel_01640 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Shel_01670 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Shel_11930 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:shi03018]
D Shel_19670 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Shel_10960 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Shel_22900 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Shel_09080 VacB/RNase II-like 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Shel_06400 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Shel_23670 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Shel_10740 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Shel_10660 predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Shel_01160 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Shel_05490 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_25000 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_01710 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:shi03030]
D Shel_21370 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Shel_02330 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Shel_16180 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Shel_10260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Shel_00020 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Shel_27870 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Shel_09410 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101]
D Shel_27910 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20180 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_10510 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Shel_10380 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Shel_12990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Shel_26670 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:shi03410]
D Shel_13250 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Shel_12880 A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Shel_23730 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Shel_07710 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Shel_21620 apurinic endonuclease APN1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Shel_12990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Shel_21910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Shel_26670 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:shi03420]
D Shel_19390 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A
D Shel_10450 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Shel_19950 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Shel_10610 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Shel_16340 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_05840 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_06110 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_22720 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_22770 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_12990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Shel_26670 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:shi03430]
D Shel_16340 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_05840 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_06110 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_22720 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_22770 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_12180 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Shel_12190 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Shel_08010 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Shel_21910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Shel_27910 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20180 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_21370 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Shel_00020 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Shel_02330 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Shel_10260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Shel_16180 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Shel_26670 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Shel_20420 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:shi03440]
D Shel_21910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Shel_27910 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20180 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_00030 recF protein K03629 recF; DNA replication and repair protein RecF
D Shel_11770 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Shel_02350 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Shel_10720 protein RecA K03553 recA; recombination protein RecA
D Shel_12990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Shel_07040 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA
D Shel_07050 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Shel_07030 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Shel_10000 RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Shel_21370 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Shel_00020 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Shel_02330 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Shel_10260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Shel_16180 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Shel_09880 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:shi02010]
D Shel_27140 ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein
D Shel_27150 ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein
D Shel_27160 ATPase component of Mn/Zn ABC-type transporter K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Shel_01600 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Shel_01610 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Shel_01620 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Shel_28140 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Shel_28130 phosphate ABC transporter membrane protein K02037 pstC; phosphate transport system permease protein
D Shel_28120 phosphate ABC transporter membrane protein K02038 pstA; phosphate transport system permease protein
D Shel_28110 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Shel_03610 periplasmic component of amino acid ABC-type transporter/signal transduction system K16957 tcyK; L-cystine transport system substrate-binding protein
D Shel_03620 amino acid ABC transporter membrane protein K16958 tcyL; L-cystine transport system permease protein
D Shel_03630 amino acid ABC transporter membrane protein K16959 tcyM; L-cystine transport system permease protein
D Shel_03640 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D Shel_25810 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D Shel_19570 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D Shel_19580 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D Shel_25820 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D Shel_25830 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D Shel_19590 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D Shel_18230 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D Shel_18250 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein
D Shel_18240 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Shel_11090 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein
D Shel_11100 ABC-type cobalt transport system, permease component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Shel_11110 ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Shel_02230 uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D Shel_00730 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_25720 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_07520 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_12800 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_24080 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_19680 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_23150 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_12820 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_24060 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_12810 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_24070 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_14690 ABC-type polysaccharide/polyol phosphate export systems, permease component K09692 tagG; teichoic acid transport system permease protein
D Shel_14680 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D Shel_05780 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D Shel_05790 uncharacterized conserved protein K20461 nukG; lantibiotic transport system permease protein
D Shel_05770 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D Shel_03750 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D Shel_07680 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C
D Shel_07670 ABC-type transport system involved in cytochrome c biogenesis, permease component K02194 ccmB; heme exporter protein B
D Shel_07660 ABC-type multidrug transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Shel_09060 cell division protein K09811 ftsX; cell division transport system permease protein
D Shel_09050 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Shel_00720 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_23120 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_25690 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_26110 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_00710 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_23130 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_25700 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_26120 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_28310 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_12840 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Shel_12850 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Shel_13640 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Shel_13630 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:shi02060]
D Shel_13260 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Shel_13270 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr
D Shel_13280 PTS system D-fructose-specific IIA component (F1P-forming)/PTS system D-fructose-specific IIB component (F1P-forming)/PTS system D-fructose-specific IIC component (F1P-forming) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Shel_13290 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:shi03070]
D Shel_07200 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Shel_08680 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Shel_10170 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Shel_23270 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Shel_28520 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Shel_09010 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Shel_10090 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Shel_10100 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Shel_13320 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Shel_19510 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Shel_19830 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D Shel_18910 type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Shel_28380 type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:shi02020]
D Shel_18050 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Shel_18040 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Shel_00330 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3
D Shel_28140 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Shel_23630 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D Shel_00010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Shel_25610 amino acid adenylation enzyme/thioester reductase family protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Shel_23920 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_13150 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_05740 signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D Shel_05730 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Shel_25870 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Shel_05720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_18330 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_03750 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D Shel_05030 malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Shel_11300 signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Shel_20640 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Shel_20620 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Shel_20340 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D Shel_20330 Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D Shel_19880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_19890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_12900 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Shel_25660 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D Shel_00170 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Shel_00180 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D Shel_05100 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:shi02024]
D Shel_18590 metallo-beta-lactamase superfamily enzyme K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D Shel_23800 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Shel_07090 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Shel_23920 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_13150 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_28520 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Shel_07200 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Shel_08680 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Shel_10170 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Shel_23270 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Shel_09010 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Shel_10090 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Shel_10100 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Shel_03750 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D Shel_09420 RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D Shel_03760 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D Shel_22200 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Shel_19670 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Shel_23490 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Shel_14800 hypothetical protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:shi01501]
D Shel_22490 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Shel_08060 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Shel_08350 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Shel_14210 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Shel_08800 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:shi01502]
D Shel_05740 signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D Shel_05730 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Shel_25870 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Shel_28460 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Shel_07700 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Shel_08810 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Shel_08820 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Shel_08850 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Shel_05720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_18330 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:shi01503]
D Shel_23630 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D Shel_25610 amino acid adenylation enzyme/thioester reductase family protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:shi01000]
C 01001 Protein kinases [BR:shi01001]
D Shel_27070 protein kinase family protein with PASTA domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Shel_27020 protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Shel_06630 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Shel_13590 protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Shel_09500 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Shel_21670 protein kinase family protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Shel_22480 uncharacterized conserved protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Shel_12770 capsular exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Shel_18050 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Shel_23920 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_13150 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_05740 signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D Shel_02190 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Shel_11300 signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Shel_00390 putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:shi01009]
D Shel_17500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Shel_01030 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
D Shel_27050 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Shel_03280 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Shel_03500 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:shi01002]
D Shel_10890 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Shel_21590 type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Shel_11780 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Shel_19190 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Shel_16720 GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Shel_12660 predicted glutamine amidotransferase K23150 E3.5.1.129; N5-(cytidine 5'-diphosphoramidyl)-L-glutamine hydrolase [EC:3.5.1.129]
D Shel_04810 predicted glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D Shel_19230 predicted glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D Shel_18950 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_19530 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_19600 uncharacterized conserved protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_06750 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_06330 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Shel_01750 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Shel_26700 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Shel_12270 penicillin V acylase-like amidase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D Shel_05690 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70]
D Shel_05680 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70]
D Shel_24310 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70]
D Shel_01740 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_08150 uncharacterized conserved protein K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_12740 uncharacterized conserved protein K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_00440 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_05400 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D Shel_00890 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D Shel_16330 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D Shel_22120 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D Shel_05720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_18330 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_25870 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Shel_20700 predicted Zn-dependent peptidase, insulinase K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Shel_17280 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Shel_02210 dipeptidase, putative K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Shel_08720 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Shel_10870 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Shel_07860 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Shel_02030 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Shel_23570 predicted membrane-associated Zn-dependent protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Shel_05830 predicted membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D Shel_23630 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D Shel_13430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Shel_11730 protease subunit of ATP-dependent protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Shel_28390 protease subunit of ATP-dependent protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Shel_02910 conserved hypothetical protein TIGR02688 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Shel_10800 SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Shel_11010 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Shel_00420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Shel_11350 proline-specific peptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Shel_24200 proline-specific peptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Shel_09070 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Shel_23000 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Shel_08240 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Shel_08360 collagenase-like protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Shel_23520 collagenase-like protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:shi01003]
D Shel_17040 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Shel_08350 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Shel_14750 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D Shel_14670 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:shi01005]
D Shel_14420 glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Shel_14670 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:shi01011]
D Shel_15170 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Shel_15080 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Shel_08870 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Shel_08860 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Shel_08830 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Shel_28460 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Shel_07700 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Shel_09110 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Shel_08820 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Shel_08850 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Shel_16350 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Shel_08730 uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D Shel_08350 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Shel_14210 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Shel_08800 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Shel_13430 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Shel_25870 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Shel_05720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_18330 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_18950 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_19530 cell wall-associated hydrolase, invasion-associated protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_19600 uncharacterized conserved protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_06750 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Shel_05690 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70]
D Shel_05680 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70]
D Shel_24310 sortase family protein, LPXTG-site transpeptidase K07284 srtA; sortase A [EC:3.4.22.70]
D Shel_01740 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_08150 uncharacterized conserved protein K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_12740 uncharacterized conserved protein K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_00440 sortase, SrtB family K08600 srtB; sortase B [EC:3.4.22.71]
D Shel_07820 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:shi01004]
D Shel_01060 (acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Shel_01080 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Shel_01070 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Shel_01100 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Shel_04180 2-nitropropane dioxygenase-like enzyme K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Shel_01050 2-nitropropane dioxygenase-like enzyme K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Shel_03920 2-nitropropane dioxygenase-like enzyme K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Shel_17330 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_17560 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_01140 acyl-CoA synthetase/AMP-acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Shel_09310 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D Shel_23800 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Shel_17150 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Shel_10060 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Shel_09710 conserved hypothetical integral membrane protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Shel_09670 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:shi01006]
D Shel_19620 geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Shel_23600 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Shel_10780 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Shel_13490 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:shi01007]
D Shel_13470 glutamyl-or glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_09840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_08370 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Shel_14880 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Shel_19450 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Shel_01700 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Shel_07450 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Shel_22990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Shel_10880 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Shel_11750 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Shel_06780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Shel_19490 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Shel_20670 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Shel_04580 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Shel_20680 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Shel_11020 glycyl-tRNA synthetase, tetrameric type, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Shel_11030 glycyl-tRNA synthetase, tetrameric type, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Shel_26270 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Shel_23550 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Shel_16370 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Shel_07800 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Shel_04680 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Shel_04690 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Shel_01850 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_27170 aspartate/tyrosine/aromatic aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Shel_16560 L-aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Shel_05350 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_15270 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Shel_10650 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Shel_22030 ornithine/acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Shel_11660 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Shel_12950 branched-chain amino acid aminotransferase, group II K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Shel_28230 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Shel_14360 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:shi00194]
D Shel_21390 F0F1-type ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Shel_21400 ATP synthase, F1 beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Shel_21410 ATP synthase, F1 gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Shel_21420 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Shel_21430 ATP synthase, F1 delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Shel_21440 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Shel_21450 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Shel_21460 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:shi03000]
D Shel_13090 transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D Shel_25320 transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Shel_18480 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Shel_02430 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Shel_07570 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Shel_08090 transcriptional regulator with HTH domain and aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Shel_00750 transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D Shel_20780 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Shel_01190 predicted transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Shel_04780 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D Shel_19320 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Shel_25080 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Shel_26760 rrf2 family protein, putative transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Shel_26380 rrf2 family protein, putative transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Shel_04790 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Shel_06950 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Shel_05920 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Shel_20030 Mn-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Shel_02060 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Shel_01590 molybdenum-binding protein K02019 modE; molybdate transport system regulatory protein
D Shel_02000 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein
D Shel_11560 predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D Shel_05270 predicted transcriptional regulator K07729 K07729; putative transcriptional regulator
D Shel_00550 predicted transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Shel_24250 RelB antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Shel_01250 uncharacterized conserved protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Shel_28480 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Shel_04740 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D Shel_10320 heat shock gene repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Shel_11840 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Shel_10820 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D Shel_08770 uncharacterized conserved protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:shi03021]
D Shel_19710 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Shel_19910 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Shel_19900 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Shel_11920 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Shel_09420 RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D Shel_03760 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D Shel_22200 RNA polymerase sigma factor, sigma-70 family K03086 rpoD; RNA polymerase primary sigma factor
D Shel_11360 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Shel_17350 RNA polymerase sigma factor, sigma-70 family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Shel_09350 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D Shel_08000 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D Shel_08690 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Shel_12290 transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D Shel_19500 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Shel_23670 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:shi03019]
D Shel_10070 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Shel_10660 predicted hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Shel_10740 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Shel_09080 VacB/RNase II-like 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Shel_22900 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Shel_06400 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Shel_19670 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Shel_10960 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Shel_23670 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Shel_01160 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Shel_05490 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_25000 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_01710 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Shel_10620 predicted P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:shi03011]
D Shel_19980 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1
D Shel_08130 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Shel_23410 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Shel_19720 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Shel_23300 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Shel_27920 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Shel_16270 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Shel_23330 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Shel_21980 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Shel_16250 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Shel_19730 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Shel_16280 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Shel_19740 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Shel_23340 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Shel_10950 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Shel_10970 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Shel_23380 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Shel_27900 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Shel_23430 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Shel_10270 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Shel_08710 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Shel_23440 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Shel_16240 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Shel_16230 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Shel_23350 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Shel_23320 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Shel_27890 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Shel_08440 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Shel_08700 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Shel_08450 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Shel_21990 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Shel_23370 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Shel_23280 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Shel_23400 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Shel_19700 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Shel_23310 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Shel_10370 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Shel_15180 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Shel_13000 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Shel_23420 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Shel_16220 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Shel_23360 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Shel_13010 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Shel_09970 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Shel_23390 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29
D Shel_23290 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30
D Shel_04660 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Shel_08660 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Shel_28540 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Shel_15190 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Shel_19750 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Shel_R0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Shel_R0002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Shel_01550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Shel_08380 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Shel_01560 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Shel_08390 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:shi03009]
D Shel_10070 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Shel_12970 GTP-binding protein Era K03595 era; GTPase
D Shel_13020 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Shel_09350 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D Shel_08000 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D Shel_08690 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Shel_12290 transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG
D Shel_07480 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Shel_09910 tRNA/rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Shel_10010 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Shel_28500 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Shel_08780 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Shel_07390 conserved hypothetical protein TIGR00096 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Shel_17290 Protein of unknown function (DUF548) K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Shel_08030 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Shel_16680 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Shel_19440 rRNA methylase, putative, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Shel_19420 uncharacterized conserved protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Shel_22980 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Shel_00510 predicted N6-adenine-specific DNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D Shel_26220 predicted SAM-dependent methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D Shel_28470 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Shel_05160 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Shel_09160 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Shel_09640 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Shel_10900 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Shel_10990 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Shel_10700 MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Shel_07810 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Shel_01420 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Shel_09700 small GTP-binding protein domain/GTP-binding conserved hypothetical protein K03977 engA; GTPase
D Shel_10790 GTP-binding proten HflX K03665 hflX; GTPase
D Shel_21600 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Shel_21900 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Shel_09370 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Shel_09340 uncharacterized conserved protein K09748 rimP; ribosome maturation factor RimP
D Shel_13060 iojap-related protein K09710 ybeB; ribosome-associated protein
D Shel_10360 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D Shel_06910 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D Shel_21870 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Shel_10040 predicted metal-binding protein, possibly nucleic-acid binding K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:shi03016]
D Shel_09800 metal-dependent hydrolase, beta-lactamase superfamily III K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Shel_05390 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Shel_08990 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Shel_13470 glutamyl-or glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_09840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_23550 prolyl-tRNA synthetase, family II K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Shel_10880 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Shel_06780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Shel_07450 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Shel_22990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Shel_01700 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Shel_19490 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Shel_20670 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Shel_07800 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Shel_04580 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Shel_16370 threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Shel_26270 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Shel_19450 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Shel_11750 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Shel_20680 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Shel_04680 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Shel_04690 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Shel_08370 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Shel_14880 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Shel_14840 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Shel_12200 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Shel_12220 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Shel_07010 predicted S-adenosylmethionine-dependent methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Shel_21360 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Shel_09390 tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Shel_09940 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Shel_08040 histone acetyltransferase K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D Shel_21600 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Shel_10780 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Shel_25360 selenium donor protein K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Shel_08950 Bacterial RNase P class A K01978 rnpB; M1 RNA
D Shel_09120 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Shel_12160 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D Shel_19240 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Shel_04510 RNA:NAD 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D Shel_18720 RNA:NAD 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D Shel_11020 glycyl-tRNA synthetase, tetrameric type, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Shel_11030 glycyl-tRNA synthetase, tetrameric type, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Shel_08460 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Shel_00130 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Shel_10310 putative TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Shel_10770 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Shel_10340 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Shel_10420 tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Shel_11000 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Shel_09600 predicted rRNA methylase SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Shel_04820 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Shel_04360 predicted redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Shel_25120 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Shel_07160 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Shel_22460 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Shel_22450 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Shel_05220 uncharacterized Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Shel_07150 uncharacterized conserved protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Shel_07170 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Shel_11930 thiazole biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Shel_05430 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Shel_19780 conserved hypothetical nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Shel_23710 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Shel_09080 VacB/RNase II-like 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Shel_10960 polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:shi03012]
D Shel_09360 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Shel_15200 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Shel_09590 ATPase component of ABC transporters with duplicated ATPase domain K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Shel_08140 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Shel_08650 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Shel_01510 small GTP-binding protein domain protein K02355 fusA; elongation factor G
D Shel_16260 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Shel_25300 selenocysteine-specific elongation factor SelB K03833 selB; selenocysteine-specific elongation factor
D Shel_14260 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Shel_23610 ribosome recycling factor K02838 frr; ribosome recycling factor
D Shel_14250 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Shel_21920 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Shel_19760 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Shel_07870 translation elongation factor P K02356 efp; elongation factor P
D Shel_09020 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:shi03110]
D Shel_01200 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Shel_03530 ATPase family protein associated with various cellular activities (AAA) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Shel_19480 ATPase with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Shel_11740 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Shel_01030 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
D Shel_01160 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Shel_05490 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_25000 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_10330 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Shel_01180 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein
D Shel_24260 disulfide bond chaperone K04083 hslO; molecular chaperone Hsp33
D Shel_01170 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D Shel_19940 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D Shel_05480 Co-chaperonin GroES K04078 groES; chaperonin GroES
D Shel_23630 trypsin-like serine protease with C-terminal PDZ domain K04771 degP; serine protease Do [EC:3.4.21.107]
D Shel_02030 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Shel_21460 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Shel_17140 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Shel_19820 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Shel_23990 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Shel_17110 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Shel_19810 Ni2+-binding GTPase, urease/hydrogenase maturation protein K04652 hypB; hydrogenase nickel incorporation protein HypB
D Shel_04330 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_16920 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_22270 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_05620 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_06850 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_07890 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_07920 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_06160 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_17900 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_18510 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_02390 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_22800 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_20880 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_27400 uncharacterized component of anaerobic dehydrogenase K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Shel_09180 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Shel_25210 thioredoxin domain-containing protein K03671 TXN; thioredoxin
D Shel_14280 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:shi04131]
D Shel_09200 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Shel_10110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Shel_06510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Shel_01030 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
D Shel_01490 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:shi04121]
C 03051 Proteasome [BR:shi03051]
D Shel_01030 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:shi03032]
D Shel_10510 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Shel_00010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Shel_27870 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Shel_18880 phage DNA replication protein (predicted replicative helicase loader) K02315 dnaC; DNA replication protein DnaC
D Shel_09410 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101]
D Shel_27910 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20180 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_21370 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Shel_00020 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Shel_10260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Shel_16180 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Shel_02330 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Shel_10380 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Shel_12990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Shel_26670 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Shel_20420 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Shel_00060 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Shel_00050 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Shel_23450 topoisomerase IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:shi03036]
D Shel_10070 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Shel_01180 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein
D Shel_00010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Shel_10080 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Shel_09620 uncharacterized conserved protein K05896 scpA; segregation and condensation protein A
D Shel_09630 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D Shel_09050 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Shel_08800 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Shel_10670 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Shel_03960 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Shel_08880 cell division septal protein K03589 ftsQ; cell division protein FtsQ
D Shel_08840 bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D Shel_09060 cell division protein K09811 ftsX; cell division transport system permease protein
D Shel_08890 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Shel_08920 uncharacterized conserved protein K09772 sepF; cell division inhibitor SepF
D Shel_14240 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Shel_14230 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Shel_14220 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Shel_14200 bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D Shel_20580 hypothetical protein K03496 parA; chromosome partitioning protein
D Shel_28490 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Shel_28480 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Shel_28500 glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Shel_10420 tRNA:m(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Shel_08760 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Shel_10280 small GTP-binding protein domain/GTP-binding conserved hypothetical protein K03978 engB; GTP-binding protein
D Shel_10640 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:shi03400]
D Shel_09920 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Shel_12880 A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Shel_13250 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Shel_11430 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Shel_17300 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Shel_25540 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Shel_10830 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Shel_07710 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Shel_23730 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Shel_21620 apurinic endonuclease APN1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Shel_21910 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Shel_26670 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Shel_12990 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Shel_19390 Excinuclease ATPase subunit K03701 uvrA; excinuclease ABC subunit A
D Shel_10450 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Shel_19950 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Shel_10610 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Shel_16340 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_05840 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_06110 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_22720 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_22770 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Shel_19910 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Shel_19900 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Shel_19710 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Shel_11920 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Shel_12180 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Shel_12190 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Shel_08010 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Shel_21370 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Shel_00020 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Shel_10260 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Shel_16180 DNA polymerase III, gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Shel_02330 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Shel_27910 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20180 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20420 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Shel_08500 T/G mismatch-specific endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D Shel_10720 protein RecA K03553 recA; recombination protein RecA
D Shel_07040 Holliday junction DNA helicase, RuvA subunit K03550 ruvA; holliday junction DNA helicase RuvA
D Shel_07050 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Shel_07030 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Shel_09880 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Shel_10590 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50
D Shel_10600 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D Shel_27860 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D Shel_00030 recF protein K03629 recF; DNA replication and repair protein RecF
D Shel_10000 RecG-like helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Shel_11770 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Shel_02350 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Shel_14810 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Shel_22220 predicted ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D Shel_00060 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Shel_00050 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Shel_23450 topoisomerase IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Shel_06400 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Shel_13520 nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Shel_22180 nucleotidyltransferase/DNA polymerase involved in DNA repair K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Shel_02290 nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D Shel_10800 SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Shel_10730 uncharacterized conserved protein K03565 recX; regulatory protein
D Shel_28440 exonuclease, DNA polymerase III, epsilon subunit family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Shel_09380 exopolyphosphatase-like enzyme K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:shi03029]
D Shel_09360 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Shel_15200 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Shel_08140 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Shel_08650 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Shel_01510 small GTP-binding protein domain protein K02355 fusA; elongation factor G
D Shel_16260 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Shel_12970 GTP-binding protein Era K03595 era; GTPase
D Shel_08370 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Shel_06780 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Shel_20670 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Shel_01700 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Shel_21770 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Shel_21760 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Shel_21780 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Shel_27910 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_20180 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Shel_01160 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Shel_01170 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D Shel_05490 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_25000 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_05480 Co-chaperonin GroES K04078 groES; chaperonin GroES
D Shel_10330 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Shel_09940 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Shel_28520 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Shel_01030 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:shi02000]
D Shel_00720 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_23120 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_25690 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_26110 ABC-type multidrug transport system, ATPase and permease component K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D Shel_00710 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_23130 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_25700 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_26120 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_28310 ABC-type multidrug transport system, ATPase and permease component K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D Shel_12840 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Shel_12850 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Shel_16410 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Shel_16460 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Shel_13640 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D Shel_13630 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D Shel_15000 ATPase component of ABC transporters with duplicated ATPase domain K15738 uup; ABC transport system ATP-binding/permease protein
D Shel_01600 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Shel_01610 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Shel_01620 ABC-type sulfate/molybdate transport systems, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Shel_27140 ABC-type tungstate transport system, permease component K05772 tupA; tungstate transport system substrate-binding protein
D Shel_27150 ABC-type tungstate transport system, periplasmic component K05773 tupB; tungstate transport system permease protein
D Shel_27160 ATPase component of Mn/Zn ABC-type transporter K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Shel_14270 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Shel_27190 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Shel_02150 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Shel_27200 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Shel_13670 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Shel_27180 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Shel_02140 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Shel_28140 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Shel_28130 phosphate ABC transporter membrane protein K02037 pstC; phosphate transport system permease protein
D Shel_28120 phosphate ABC transporter membrane protein K02038 pstA; phosphate transport system permease protein
D Shel_28110 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Shel_03610 periplasmic component of amino acid ABC-type transporter/signal transduction system K16957 tcyK; L-cystine transport system substrate-binding protein
D Shel_03620 amino acid ABC transporter membrane protein K16958 tcyL; L-cystine transport system permease protein
D Shel_03630 amino acid ABC transporter membrane protein K16959 tcyM; L-cystine transport system permease protein
D Shel_03640 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D Shel_25810 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D Shel_19570 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D Shel_19580 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D Shel_25820 ABC-type metal ion transport system, permease component K02072 metI; D-methionine transport system permease protein
D Shel_25830 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D Shel_19590 ABC-type metal ion transport system, ATPase component K02071 metN; D-methionine transport system ATP-binding protein
D Shel_06880 amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Shel_03950 periplasmic component of amino acid ABC-type transporter/signal transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Shel_15320 periplasmic component of amino acid ABC-type transporter/signal transduction system K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Shel_06890 amino acid ABC transporter membrane protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Shel_06900 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Shel_24730 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Shel_24720 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein
D Shel_24710 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Shel_24460 ABC-type Fe3+-hydroxamate transport system, periplasmic component K25034 btuF; cobalamin transport system substrate-binding protein
D Shel_24450 ABC-type Fe3+-siderophore transport system, permease component K25027 btuC; cobalamin transport system permease protein
D Shel_24440 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Shel_18230 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D Shel_18250 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein
D Shel_18240 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Shel_11100 ABC-type cobalt transport system, permease component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Shel_11090 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein
D Shel_11110 ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Shel_02230 uncharacterized conserved protein K03523 bioY; biotin transport system substrate-specific component
D Shel_25710 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D Shel_00740 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D Shel_23140 conserved hypothetical integral membrane protein TIGR02185 K16926 htsT; energy-coupling factor transport system substrate-specific component
D Shel_00730 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_25720 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_07520 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_12800 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_24080 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_19680 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_23150 ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Shel_12820 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_24060 ABC-type cobalt transport system, ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_12810 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_24070 ABC-type cobalt transport system, ATPase component K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_25730 ATPase component of various ABC-type transport systems with duplicated ATPase domain K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_23160 ABC-type cobalt transport system, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_07510 ATPase component of various ABC-type transport systems with duplicated ATPase domain K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Shel_07500 predicted membrane protein K16925 ykoE; energy-coupling factor transport system permease protein
D Shel_14690 ABC-type polysaccharide/polyol phosphate export systems, permease component K09692 tagG; teichoic acid transport system permease protein
D Shel_14680 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D Shel_05770 ABC-type multidrug transport system, ATPase component K20459 nukF; lantibiotic transport system ATP-binding protein
D Shel_05780 hypothetical protein K20460 nukE; lantibiotic transport system permease protein
D Shel_05790 uncharacterized conserved protein K20461 nukG; lantibiotic transport system permease protein
D Shel_03750 ABC-type multidrug transport system, ATPase component K20490 nisF; lantibiotic transport system ATP-binding protein
D Shel_07680 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C
D Shel_07670 ABC-type transport system involved in cytochrome c biogenesis, permease component K02194 ccmB; heme exporter protein B
D Shel_07660 ABC-type multidrug transport system, ATPase component K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Shel_09060 cell division protein K09811 ftsX; cell division transport system permease protein
D Shel_09050 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Shel_24830 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Shel_24840 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Shel_12100 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Shel_18810 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Shel_26750 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Shel_23530 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Shel_01820 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D Shel_01930 Predicted permease K02004 ABC.CD.P; putative ABC transport system permease protein
D Shel_26210 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Shel_27320 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Shel_01810 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Shel_01920 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Shel_26780 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Shel_26980 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Shel_05890 putative efflux protein, MATE family K26939 norM; MATE family, multidrug efflux pump
D Shel_18540 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D Shel_18080 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D Shel_02070 putative efflux protein, MATE family K26937 dinF; MATE family, multidrug efflux pump
D Shel_10480 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D Shel_24130 sugar phosphate permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Shel_09330 arabinose efflux permease family protein K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter
D Shel_21310 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Shel_22680 arabinose efflux permease family protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Shel_27290 drug resistance transporter, EmrB/QacA subfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D Shel_01490 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
D Shel_13260 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Shel_13270 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr
D Shel_13280 PTS system D-fructose-specific IIA component (F1P-forming)/PTS system D-fructose-specific IIB component (F1P-forming)/PTS system D-fructose-specific IIC component (F1P-forming) K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Shel_12070 permease, glycerol uptake facilitator K06188 aqpZ; aquaporin Z
D Shel_17360 uncharacterized protein containing a von Willebrand factor type A (vWA) domain K07114 yfbK; Ca-activated chloride channel homolog
D Shel_09820 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Shel_25770 Mg2+ transporter MgtE K06213 mgtE; magnesium transporter
D Shel_06390 Mg2+/Co2+ transporter K03284 corA; magnesium transporter
D Shel_13500 crcB protein K06199 crcB; fluoride exporter
D Shel_05710 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D Shel_22350 amino acid transporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D Shel_19660 amino acid transporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D Shel_19330 predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D Shel_14320 Integral membrane protein DUF6 K18925 ykkD; paired small multidrug resistance pump
D Shel_05410 predicted permease, DMT superfamily K03298 TC.DME; drug/metabolite transporter, DME family
D Shel_23910 rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D Shel_17820 L-lactate transport K03303 lutP; lactate permease
D Shel_25390 choline/carnitine/betaine transport K05020 opuD; glycine betaine transporter
D Shel_04650 sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D Shel_05510 SSS sodium solute transporter K11928 putP; sodium/proline symporter
D Shel_10570 Na+/serine symporter K07862 sstT; serine/threonine transporter
D Shel_07000 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D Shel_12540 Na+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D Shel_17400 Na+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D Shel_05850 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D Shel_11700 NhaP-type Na+(K+)/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Shel_01400 Trk-type K+ transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein
D Shel_00280 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D Shel_00290 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D Shel_04100 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D Shel_04600 uracil-xanthine permease K02824 uraA; uracil permease
D Shel_28050 permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Shel_22210 sulfate permease-like transporter, MFS superfamily K03321 TC.SULP; sulfate permease, SulP family
D Shel_08730 uncharacterized membrane protein, putative virulence factor K03980 murJ; putative peptidoglycan lipid II flippase
D Shel_13080 predicted permease K24180 mleP; malate permease and related proteins
D Shel_09770 predicted permease K24180 mleP; malate permease and related proteins
D Shel_13200 predicted branched-chain amino acid permease (azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D Shel_13210 predicted membrane protein K26606 azlD; branched chain amino acid efflux pump
D Shel_24050 predicted membrane protein K23675 fmnP; riboflavin transporter
D Shel_22470 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter
D Shel_08840 bacterial cell division membrane protein K03588 ftsW; cell division protein FtsW
D Shel_07970 acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Shel_04380 cytochrome c biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D Shel_04310 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family K07309 ynfE; Tat-targeted selenate reductase subunit YnfE [EC:1.97.1.9]
D Shel_07940 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_22240 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_17920 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_02420 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_02110 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_27670 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_27730 anaerobic dehydrogenase, typically selenocysteine-containing K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D Shel_24570 Fe-S-cluster-containing hydrogenase subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D Shel_27680 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_02120 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_27740 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_02410 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_07930 Fe-S-cluster-containing hydrogenase subunit K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D Shel_27690 polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D Shel_02130 polysulphide reductase K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D Shel_02080 formate-dependent nitrite reductase, membrane component K16294 psrC; polysulfide reductase chain C
D Shel_12770 capsular exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Shel_12760 capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D Shel_17730 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D Shel_20070 FeoA-like protein K04758 feoA; ferrous iron transport protein A
D Shel_20060 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D Shel_17720 small GTP-binding protein domain protein K04759 feoB; ferrous iron transport protein B
D Shel_16120 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D Shel_20050 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D Shel_07650 cytochrome c biogenesis factor K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:shi02044]
D Shel_21590 type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Shel_20640 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Shel_20620 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Shel_20340 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D Shel_20330 Flp pilus assembly protein TadC K12511 tadC; tight adherence protein C
D Shel_08930 YGGT family protein K02221 yggT; YggT family protein
D Shel_10240 competence protein ComEA-like protein with helix-hairpin-helix repeat region K02237 comEA; competence protein ComEA
D Shel_21480 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Shel_10250 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Shel_18910 type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Shel_28380 type IV secretory pathway, VirD4 component K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Shel_09010 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Shel_07200 protein-export membrane protein SecF/protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Shel_08680 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Shel_10170 protein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Shel_23270 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Shel_10100 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Shel_10090 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Shel_28520 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Shel_13320 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Shel_19510 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D Shel_19830 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:shi02042]
D Shel_00250 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:shi02022]
D Shel_18050 signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Shel_18040 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Shel_00330 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3
D Shel_23920 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_13150 histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Shel_05740 signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D Shel_05730 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Shel_02190 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Shel_11300 signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D Shel_00390 putative regulator of cell autolysis K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Shel_00400 response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
C 02035 Bacterial motility proteins [BR:shi02035]
D Shel_21590 type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Shel_20640 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D Shel_20620 Flp pilus assembly protein, ATPase CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:shi04812]
D Shel_17380 uncharacterized conserved protein K06990 MEMO1; MEMO1 family protein
D Shel_14240 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Shel_08890 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Shel_20580 hypothetical protein K03496 parA; chromosome partitioning protein
D Shel_28490 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Shel_28480 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:shi04147]
D Shel_01030 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG
D Shel_19670 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Shel_10110 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Shel_10120 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Shel_17280 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Shel_05490 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_25000 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Shel_01160 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Shel_00480 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Shel_06740 IMP dehydrogenase/GMP reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Shel_08650 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Shel_12200 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Shel_12220 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Shel_23800 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Shel_17500 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Shel_23240 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Shel_04860 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Shel_26580 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Shel_26590 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Shel_22890 N-dimethylarginine dimethylaminohydrolase K01482 DDAH; dimethylargininase [EC:3.5.3.18]
D Shel_06460 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Shel_17070 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Shel_21570 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Shel_19880 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_19890 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Shel_11640 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Shel_28220 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Shel_23860 AICAR transformylase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Shel_13830 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Shel_02680 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Shel_09240 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Shel_10130 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Shel_06510 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:shi02048]
D Shel_22040 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Shel_19090 helicase, type I site-specific restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Shel_17680 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Shel_19070 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Shel_17660 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Shel_20390 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Shel_19060 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Shel_17670 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Shel_20400 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Shel_20250 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Shel_20420 DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Shel_12680 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Shel_24250 RelB antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D Shel_11410 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D Shel_11400 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J
D Shel_03820 Plasmid stabilisation system protein K19092 parE1_3_4; toxin ParE1/3/4
D Shel_08890 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Shel_14240 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Shel_13470 glutamyl-or glutaminyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_09840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Shel_09940 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:shi04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:shi01504]
D Shel_05850 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D Shel_02730 Aminoglycoside-2''-adenylyltransferase K19545 lnuA_C_D_E; lincosamide nucleotidyltransferase A/C/D/E
D Shel_05720 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_18330 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Shel_25870 D-Ala-D-Ala dipeptidase vanX K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D Shel_05740 signal transduction histidine kinase K18350 vanSC; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D Shel_05730 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Shel_25610 amino acid adenylation enzyme/thioester reductase family protein K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:shi00537]
D Shel_17280 Zn-dependent dipeptidase, microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:shi03100]
D Shel_07560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Shel_08330 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Shel_28340 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Shel_00070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_13110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_27110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_09170 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Shel_09540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Shel_13730 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Shel_14160 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Shel_11970 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Shel_26560 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Shel_08970 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Shel_11670 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Shel_08470 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Shel_08980 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Shel_11950 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_11980 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_09150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_28400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Shel_13120 tRNA-His K14226 tRNA-His; tRNA His
D Shel_28350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Shel_11710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_26300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_19630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_10180 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_02220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Shel_26570 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Shel_13130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Shel_08640 tRNA-Met K14230 tRNA-Met; tRNA Met
D Shel_09430 tRNA-Met K14230 tRNA-Met; tRNA Met
D Shel_26130 tRNA-Met K14230 tRNA-Met; tRNA Met
D Shel_27710 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Shel_09740 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Shel_09140 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Shel_19520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Shel_27990 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_28090 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_27960 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_27540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Shel_15370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Shel_26520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Shel_08630 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Shel_08670 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Shel_08620 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Shel_11940 tRNA-Val K14237 tRNA-Val; tRNA Val
D Shel_09530 tRNA-Val K14237 tRNA-Val; tRNA Val
D Shel_20650 tRNA-Val K14237 tRNA-Val; tRNA Val
D Shel_01550 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Shel_08380 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Shel_01560 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Shel_08390 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Shel_R0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Shel_R0002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Shel_02310 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D Shel_08950 Bacterial RNase P class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Shel_07410 Fe-dependent oxidoreductase, alcohol dehydrogenase K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Shel_18200 predicted oxidoreductase, aryl-alcohol dehydrogenase like protein K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D Shel_27500 indolepyruvate ferredoxin oxidreductase, alpha/beta subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Shel_13450 indolepyruvate ferredoxin oxidreductase, alpha/beta subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Shel_27490 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Shel_13460 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Shel_02660 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D Shel_09250 flavin-dependent dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Shel_27800 flavin-dependent dehydrogenase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D Shel_18380 Zn-dependent oxidoreductase, NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Shel_05500 methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D Shel_04160 predicted hydrolase or acyltransferase of alpha/beta superfamily K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D Shel_00860 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Shel_25090 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D Shel_16530 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Shel_15140 Desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Shel_01880 ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2]
D Shel_25200 Glycine reductase complex selenoprotein A K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D Shel_25240 glycine/sarcosine/betaine reductase component B alpha/beta subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D Shel_21510 glycine/sarcosine/betaine reductase component B alpha/beta subunit K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D Shel_25230 glycine reductase, selenoprotein B K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D Shel_21500 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D Shel_25180 fatty acid/phospholipid biosynthesis enzyme K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D Shel_25190 hypothetical protein K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D Shel_25410 glycine/sarcosine/betaine reductase component B alpha/beta subunit K21578 grdI; betaine reductase complex component B subunit alpha [EC:1.21.4.4]
D Shel_25400 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family K21579 grdH; betaine reductase complex component B subunit beta [EC:1.21.4.4]
D Shel_04770 ribonucleoside-triphosphate reductase class III activase subunit K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Shel_03520 hypothetical protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Shel_14950 pyruvate-formate lyase-activating enzyme K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Shel_18280 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Shel_17370 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Shel_17450 glycyl-radical enzyme activator family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Shel_16130 pyruvate formate lyase activating protein-like uncharacterized Fe-S protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Shel_27820 Fe-S oxidoreductase, coproporphyrinogen III oxidase K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D Shel_12530 ornithine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D Shel_13700 putative molybdenum utilization protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D Shel_26880 NCAIR mutase-like protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Shel_15150 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Shel_21260 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Shel_21060 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Shel_09990 predicted kinase, dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Shel_11040 uncharacterized conserved protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Shel_01720 uncharacterized conserved protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D Shel_12780 capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Shel_27240 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Shel_23060 protein tyrosine/serine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Shel_07830 HAD phosphatase subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Shel_07460 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Shel_22950 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Shel_15380 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Shel_22540 negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Shel_22310 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Shel_09890 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Shel_06570 N-formylmethionyl-tRNA deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Shel_16440 proline-specific peptidase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D Shel_21290 proline-specific peptidase K18457 laaA; L-proline amide hydrolase [EC:3.5.1.101]
D Shel_01940 predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Shel_24870 predicted xylanase/chitin deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Shel_04400 predicted amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Shel_16660 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Shel_21490 endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Shel_01010 yjeF-like protein, hydroxyethylthiazole kinase-related K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Shel_04890 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Shel_26870 conserved hypothetical protein TIGR00299 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Shel_25420 CoA-substrate-specific enzyme activase, putative K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D Shel_13390 NADH:ubiquinone oxidoreductase chain I-like protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Shel_01260 copper/silver-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Shel_05940 heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Shel_05530 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Shel_05540 (4Fe-4S) cluster-containing protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Shel_05550 uncharacterized conserved protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D Shel_06930 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D Shel_26820 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D Shel_07610 hypothetical protein K02570 napD; periplasmic nitrate reductase NapD
D Shel_10550 flavodoxin K03839 fldA; flavodoxin I
D Shel_13350 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit K14086 echA; ech hydrogenase subunit A
D Shel_13360 ech hydrogenase subunit C K14088 echC; ech hydrogenase subunit C
D Shel_13380 ech hydrogenase subunit E K14090 echE; ech hydrogenase subunit E
D Shel_07580 4Fe-4S protein K02573 napG; ferredoxin-type protein NapG
D Shel_06170 4Fe-4S protein K02573 napG; ferredoxin-type protein NapG
D Shel_16850 4Fe-4S protein K02573 napG; ferredoxin-type protein NapG
D Shel_22790 Fe-S-cluster-containing hydrogenase subunit K02573 napG; ferredoxin-type protein NapG
D Shel_27410 4Fe-4S protein K02573 napG; ferredoxin-type protein NapG
D Shel_22780 polyferredoxin K02574 napH; ferredoxin-type protein NapH
D Shel_07620 4Fe-4S protein K02574 napH; ferredoxin-type protein NapH
D Shel_06180 polyferredoxin K02574 napH; ferredoxin-type protein NapH
D Shel_16840 4Fe-4S protein K02574 napH; ferredoxin-type protein NapH
D Shel_27420 4Fe-4S protein K02574 napH; ferredoxin-type protein NapH
D Shel_09230 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Shel_02670 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Shel_09260 ferredoxin-like protein K03855 fixX; ferredoxin like protein
D Shel_27810 ferredoxin-like protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D Shel_17990 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Shel_16150 uncharacterized conserved protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D Shel_06680 hypothetical protein K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D Shel_08910 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D Shel_07760 predicted unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D Shel_13850 Mg-chelatase subunit ChlD K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Shel_07070 cold-shock DNA-binding protein family K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D Shel_04590 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 tig; trigger factor
D Shel_11720 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 tig; trigger factor
D Shel_21810 uncharacterized protein involved in formate dehydrogenase formation K02380 fdhE; FdhE protein
D Shel_09100 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Shel_00530 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D Shel_00520 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Shel_00490 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Shel_00540 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Shel_10400 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D Shel_20460 predicted ATPase with chaperone activity K07391 comM; magnesium chelatase family protein
D Shel_01780 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D Shel_07730 O-6-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Shel_17830 O-6-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D Shel_19120 predicted endonuclease related to Holliday junction resolvase K07460 yraN; putative endonuclease
D Shel_10390 predicted endonuclease related to Holliday junction resolvase K07460 yraN; putative endonuclease
D Shel_20490 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease
D Shel_20220 predicted endonuclease related to Holliday junction resolvase K07460 yraN; putative endonuclease
D Shel_21070 predicted endonuclease containing a URI domain K07461 K07461; putative endonuclease
D Shel_20450 predicted Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 smf; DNA processing protein
D Shel_10410 DNA protecting protein DprA K04096 smf; DNA processing protein
D Shel_24410 Recombination protein MgsA K07478 ycaJ; putative ATPase
D Shel_07770 Recombination protein MgsA K07478 ycaJ; putative ATPase
D Shel_05870 hypothetical protein K07483 K07483; transposase
D Shel_04840 hypothetical protein K07483 K07483; transposase
D Shel_01650 hypothetical protein K07483 K07483; transposase
D Shel_03240 hypothetical protein K07483 K07483; transposase
D Shel_14510 Transposase K07483 K07483; transposase
D Shel_15040 hypothetical protein K07483 K07483; transposase
D Shel_04230 transposase K07486 K07486; transposase
D Shel_00780 transposase K07486 K07486; transposase
D Shel_27520 transposase K07486 K07486; transposase
D Shel_27550 transposase K07486 K07486; transposase
D Shel_11260 transposase K07491 rayT; REP-associated tyrosine transposase
D Shel_01210 transposase K07491 rayT; REP-associated tyrosine transposase
D Shel_12790 transposase K07491 rayT; REP-associated tyrosine transposase
D Shel_02550 transposase K07493 K07493; putative transposase
D Shel_02800 transposase K07493 K07493; putative transposase
D Shel_05860 transposase K07497 K07497; putative transposase
D Shel_04830 transposase K07497 K07497; putative transposase
D Shel_01660 transposase K07497 K07497; putative transposase
D Shel_03230 transposase K07497 K07497; putative transposase
D Shel_03250 transposase K07497 K07497; putative transposase
D Shel_14520 transposase K07497 K07497; putative transposase
D Shel_15050 transposase K07497 K07497; putative transposase
D Shel_14150 site-specific recombinase XerD K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D Shel_20810 phage shock protein A (IM30), suppresses sigma54-dependent transcription K03969 pspA; phage shock protein A
D Shel_04370 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E
D Shel_16580 Rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E
D Shel_02340 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Shel_06480 Na+/melibiose symporter-like transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D Shel_18020 phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Shel_06070 phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Shel_01330 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Shel_24190 SNF family Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Shel_22700 SNF family Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Shel_16470 SNF family Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Shel_17410 SNF family Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Shel_21340 SNF family Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Shel_23840 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Shel_17880 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Shel_02580 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Shel_07220 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Shel_26970 anion transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D Shel_28510 predicted RNA-binding protein K06346 jag; spoIIIJ-associated protein
D Shel_20150 site-specific recombinase, DNA invertase Pin K06400 spoIVCA; site-specific DNA recombinase
D Shel_20360 site-specific recombinase, DNA invertase Pin K06400 spoIVCA; site-specific DNA recombinase
D Shel_17420 AAA+ family ATPase K06413 spoVK; stage V sporulation protein K
D Shel_10760 uncharacterized conserved protein K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D Shel_07540 carbon starvation protein, predicted membrane protein K06200 cstA; carbon starvation protein
D Shel_28010 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D Shel_05450 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D Shel_12960 phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Shel_10690 uncharacterized conserved protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D Shel_23740 lysozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
D Shel_21240 multidrug resistance efflux pump K02005 ABC.CD.TX; HlyD family secretion protein
D Shel_07640 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
C 99994 Others
D Shel_24590 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Shel_01990 DNA-binding protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Shel_05330 predicted acyltransferase K02348 elaA; ElaA protein
D Shel_13510 EMAP domain-containing protein K06878 K06878; tRNA-binding protein
D Shel_26790 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Shel_26800 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 sufD; Fe-S cluster assembly protein SufD
D Shel_28080 uncharacterized conserved protein K03744 lemA; LemA protein
D Shel_06790 uncharacterized membrane protein K03748 sanA; SanA protein
D Shel_02320 uncharacterized membrane-associated protein K03975 dedA; membrane-associated protein
D Shel_06020 YhgE/Pip-like protein K01421 yhgE; putative membrane protein
D Shel_06030 YhgE/Pip-like protein K01421 yhgE; putative membrane protein
D Shel_26740 YhgE/Pip-like protein K01421 yhgE; putative membrane protein
D Shel_11800 X-X-X-Leu-X-X-Gly heptad repeat-containing protein K01421 yhgE; putative membrane protein
D Shel_05150 predicted membrane protein K08972 K08972; putative membrane protein
D Shel_22880 predicted membrane protein K08972 K08972; putative membrane protein
D Shel_00240 predicted membrane protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D Shel_18100 alpha/beta superfamily hydrolase K06889 K06889; uncharacterized protein
D Shel_09450 hypothetical protein K06889 K06889; uncharacterized protein
D Shel_00920 alpha/beta superfamily hydrolase K06889 K06889; uncharacterized protein
D Shel_17390 hypothetical protein K06889 K06889; uncharacterized protein
D Shel_06320 hypothetical protein K06889 K06889; uncharacterized protein
D Shel_25940 hypothetical protein K06889 K06889; uncharacterized protein
D Shel_10540 predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D Shel_02740 predicted ATPase (AAA+ superfamily) K06921 K06921; uncharacterized protein
D Shel_12600 hypothetical protein K06926 K06926; uncharacterized protein
D Shel_05380 predicted DNA-binding protein with PD1-like DNA-binding motif K06934 K06934; uncharacterized protein
D Shel_22440 hypothetical protein K06950 K06950; uncharacterized protein
D Shel_27100 uncharacterized domain HDIG-containing protein K06950 K06950; uncharacterized protein
D Shel_10980 predicted RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein
D Shel_19430 predicted RNA-binding protein containing a PIN domain K06962 K06962; uncharacterized protein
D Shel_12170 predicted Zn-dependent protease K06973 K06973; uncharacterized protein
D Shel_04480 putative hydrolase, CocE/NonD family K06978 K06978; uncharacterized protein
D Shel_11190 putative hydrolase, CocE/NonD family K06978 K06978; uncharacterized protein
D Shel_22840 predicted deacylase K06987 K06987; uncharacterized protein
D Shel_22830 predicted deacylase K06987 K06987; uncharacterized protein
D Shel_20760 predicted flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein
D Shel_02440 predicted membrane protein, putative toxin regulator K07035 K07035; uncharacterized protein
D Shel_26550 predicted TIM-barrel fold metal-dependent hydrolase K07045 K07045; uncharacterized protein
D Shel_03910 predicted nucleotidyltransferase K07074 K07074; uncharacterized protein
D Shel_16590 predicted oxidoreductase of aldo/keto reductase family K07079 K07079; uncharacterized protein
D Shel_06340 predicted oxidoreductase of aldo/keto reductase family K07079 K07079; uncharacterized protein
D Shel_04990 predicted oxidoreductase of aldo/keto reductase family K07079 K07079; uncharacterized protein
D Shel_26650 predicted permease K07090 K07090; uncharacterized protein
D Shel_00380 predicted permease K07090 K07090; uncharacterized protein
D Shel_19410 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Shel_06370 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Shel_25130 hypothetical protein K07112 K07112; uncharacterized protein
D Shel_04350 YeeE/YedE family protein (DUF395) K07112 K07112; uncharacterized protein
D Shel_26050 putative NADH-flavin reductase K07118 K07118; uncharacterized protein
D Shel_18580 short-chain dehydrogenase of unknown substrate specificity K07124 K07124; uncharacterized protein
D Shel_04070 TPR repeat-containing protein K07126 K07126; uncharacterized protein
D Shel_04080 TPR repeat-containing protein K07126 K07126; uncharacterized protein
D Shel_05050 pyruvate formate-lyase activating-like enzyme K07129 K07129; uncharacterized protein
D Shel_00200 pyruvate formate-lyase activating-like enzyme K07129 K07129; uncharacterized protein
D Shel_27760 predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D Shel_18710 predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D Shel_03690 predicted ATPase (AAA+ superfamily) K07133 K07133; uncharacterized protein
D Shel_15100 FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D Shel_07360 FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D Shel_07290 FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D Shel_17170 uncharacterized Fe-S center protein K07138 K07138; uncharacterized protein
D Shel_00110 uncharacterized membrane protein, possible Na+ channel or pump K07150 K07150; uncharacterized protein
D Shel_09960 Zn-ribbon protein, possibly nucleic acid-binding K07164 K07164; uncharacterized protein
D Shel_28530 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D Shel_20090 hypothetical protein K09005 K09005; uncharacterized protein
D Shel_00190 uncharacterized conserved protein K09117 K09117; uncharacterized protein
D Shel_02050 uncharacterized conserved protein K09131 K09131; uncharacterized protein
D Shel_21160 uncharacterized conserved protein K09138 K09138; uncharacterized protein
D Shel_05460 uncharacterized conserved protein K09157 K09157; uncharacterized protein
D Shel_23070 uncharacterized conserved protein K09780 K09780; uncharacterized protein
D Shel_00770 uncharacterized conserved protein K09807 K09807; uncharacterized protein
D Shel_04620 uncharacterized conserved protein K09861 K09861; uncharacterized protein
D Shel_21880 phosphate transport regulator related to PhoU K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024