+D GENES KO
#
KEGG Orthology (KO) - Sphingobium xenophagum
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:shyd00010]
D CJD35_00495 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CJD35_12935 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJD35_02935 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJD35_02515 glpX; fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CJD35_13240 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CJD35_01290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJD35_13250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJD35_13245 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJD35_00955 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CJD35_14815 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJD35_02025 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJD35_12640 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CJD35_14805 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_19890 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_14800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_19885 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_13420 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CJD35_19880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01340 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_18215 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_12525 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_21330 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_06150 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CJD35_12410 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_06175 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CJD35_03650 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJD35_16435 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CJD35_00070 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CJD35_07430 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CJD35_12605 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CJD35_19985 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CJD35_07830 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:shyd00020]
D CJD35_14330 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CJD35_17035 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CJD35_01050 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJD35_01550 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CJD35_01600 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CJD35_01595 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01605 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJD35_11610 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJD35_01970 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CJD35_01625 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJD35_01980 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJD35_01975 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CJD35_03520 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CJD35_08460 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJD35_01610 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJD35_07830 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJD35_19985 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CJD35_14805 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_19890 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_14800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_19885 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_13420 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CJD35_19880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:shyd00030]
D CJD35_12935 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJD35_00485 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CJD35_10840 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D CJD35_03840 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CJD35_13255 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CJD35_09790 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CJD35_14580 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CJD35_12605 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CJD35_03720 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJD35_00490 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D CJD35_00500 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CJD35_15645 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D CJD35_15945 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CJD35_00805 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CJD35_19520 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CJD35_13240 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CJD35_02935 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJD35_02515 glpX; fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:shyd00040]
D CJD35_00035 uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D CJD35_17885 altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D CJD35_00030 mannitol dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D CJD35_05575 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CJD35_03865 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJD35_03840 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CJD35_07435 gluconolaconase K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110]
D CJD35_01685 dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D CJD35_01690 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:shyd00051]
D CJD35_17150 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CJD35_18775 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CJD35_05570 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CJD35_22240 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CJD35_05635 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CJD35_18790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CJD35_18770 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CJD35_02935 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJD35_02515 glpX; fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CJD35_13240 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CJD35_01290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJD35_14580 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CJD35_09295 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:shyd00052]
D CJD35_00070 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CJD35_07430 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D CJD35_22110 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_10850 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_03870 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_03865 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJD35_12605 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CJD35_00495 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CJD35_07410 gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]
D CJD35_01680 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D CJD35_01675 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D CJD35_17655 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CJD35_15085 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CJD35_15090 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:shyd00053]
D CJD35_05575 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CJD35_15945 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CJD35_08135 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_01690 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:shyd00500]
D CJD35_17655 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CJD35_15085 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CJD35_15090 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CJD35_17155 glycoside hydrolase 68 family protein K00692 sacB; levansucrase [EC:2.4.1.10]
D CJD35_03865 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJD35_07975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CJD35_11215 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CJD35_14640 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D CJD35_02435 glycosyltransferase WbuB K16150 K16150; glycogen synthase [EC:2.4.1.11]
D CJD35_14650 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D CJD35_14630 glgX; glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D CJD35_13865 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D CJD35_13855 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D CJD35_12605 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CJD35_00495 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CJD35_12935 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJD35_17150 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:shyd00520]
D CJD35_10345 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CJD35_07945 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CJD35_17150 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D CJD35_01560 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJD35_10250 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CJD35_01570 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJD35_14020 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D CJD35_13105 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D CJD35_13110 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D CJD35_02240 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJD35_10460 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJD35_13915 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CJD35_13905 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CJD35_07405 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D CJD35_00495 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CJD35_12605 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CJD35_03865 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJD35_05575 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CJD35_22110 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_10850 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_03870 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_08135 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CJD35_09295 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CJD35_12935 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJD35_18775 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CJD35_05570 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CJD35_05635 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CJD35_18790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CJD35_18770 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CJD35_22240 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CJD35_11215 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CJD35_11220 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CJD35_14640 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:shyd00620]
D CJD35_03650 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJD35_14805 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_19890 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_14800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_19885 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_13420 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CJD35_19880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_06510 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D CJD35_01340 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_18215 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_12525 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_21330 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_06150 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CJD35_12410 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CJD35_02025 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJD35_01440 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJD35_09025 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_06250 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_06405 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_09020 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJD35_06255 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJD35_12325 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_06175 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D CJD35_16435 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CJD35_18010 pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CJD35_02750 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D CJD35_18855 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D CJD35_04940 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CJD35_18170 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CJD35_06440 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CJD35_21285 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CJD35_03455 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CJD35_04935 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CJD35_16485 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CJD35_14480 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CJD35_05935 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CJD35_01610 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJD35_03520 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D CJD35_08460 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJD35_03410 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CJD35_19985 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D CJD35_07830 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJD35_12640 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CJD35_14470 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_14755 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:shyd00630]
D CJD35_02140 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D CJD35_03650 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJD35_14470 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D CJD35_01610 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJD35_14330 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CJD35_17035 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CJD35_01050 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_01750 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D CJD35_12960 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CJD35_15615 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CJD35_07870 CoA ester lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30]
D CJD35_12975 acetyl/propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D CJD35_12955 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CJD35_12965 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CJD35_02530 catalase K03781 katE; catalase [EC:1.11.1.6]
D CJD35_01030 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D CJD35_16485 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CJD35_01575 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJD35_08360 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJD35_17190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_13395 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_14585 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJD35_10505 aminomethyl-transferring glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CJD35_10510 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CJD35_10495 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_10500 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CJD35_19520 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CJD35_14925 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D CJD35_16585 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CJD35_00500 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CJD35_07730 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CJD35_07725 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJD35_07720 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJD35_07715 NADH-quinone oxidoreductase subunit E K00127 fdoI; formate dehydrogenase subunit gamma
D CJD35_07130 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D CJD35_16385 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:shyd00640]
D CJD35_03650 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJD35_16435 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CJD35_13310 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D CJD35_13305 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D CJD35_13300 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_01440 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJD35_09025 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_06250 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_06405 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_09020 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJD35_06255 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJD35_12325 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJD35_12975 acetyl/propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D CJD35_12955 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CJD35_12960 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CJD35_15615 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CJD35_12965 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CJD35_11610 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJD35_01605 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJD35_10920 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CJD35_17045 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D CJD35_17060 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D CJD35_17055 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D CJD35_01050 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJD35_17040 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:shyd00650]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06265 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CJD35_04705 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CJD35_06825 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_06510 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D CJD35_13000 alpha/beta hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D CJD35_02545 class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D CJD35_01070 polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D CJD35_01750 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D CJD35_16585 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D CJD35_01970 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CJD35_01625 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJD35_01980 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJD35_01975 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CJD35_17735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_14970 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_19605 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16580 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16755 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_09040 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CJD35_06335 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CJD35_09050 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CJD35_06330 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CJD35_09895 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D CJD35_14730 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14985 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14740 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJD35_06935 short-chain dehydrogenase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D CJD35_15960 SDR family oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:shyd00660]
D CJD35_14730 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14985 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14740 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJD35_11610 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJD35_01605 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJD35_19550 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CJD35_16800 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CJD35_02125 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJD35_02120 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJD35_12175 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:shyd00562]
D CJD35_04815 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CJD35_14450 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CJD35_07015 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D CJD35_10920 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CJD35_01290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:shyd00190]
D CJD35_14445 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CJD35_14440 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CJD35_14435 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CJD35_14430 NADH-quinone oxidoreductase subunit NuoD K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CJD35_14420 NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CJD35_14415 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CJD35_14410 NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CJD35_14405 NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CJD35_14400 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CJD35_14395 NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CJD35_14390 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CJD35_14385 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CJD35_14380 NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CJD35_01970 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D CJD35_01625 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJD35_01980 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJD35_01975 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D CJD35_02985 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJD35_02980 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJD35_02975 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJD35_08285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CJD35_00775 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D CJD35_08295 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D CJD35_08280 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D CJD35_08275 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D CJD35_08290 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CJD35_01670 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CJD35_13980 ccoN; cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJD35_13975 ccoO; cytochrome c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJD35_13970 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJD35_13965 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJD35_00770 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D CJD35_00760 cyoA; cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D CJD35_17290 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJD35_17285 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJD35_17760 cytochrome c family protein K08738 CYC; cytochrome c
D CJD35_07590 cytochrome c family protein K08738 CYC; cytochrome c
D CJD35_12265 histidine kinase K08738 CYC; cytochrome c
D CJD35_09750 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJD35_09740 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJD35_09745 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJD35_09755 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJD35_09735 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJD35_12145 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJD35_12155 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJD35_12160 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJD35_12150 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJD35_04645 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CJD35_07520 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:shyd00680]
D CJD35_21310 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CJD35_12510 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CJD35_18195 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CJD35_01340 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_18215 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_12525 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_21330 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_01330 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D CJD35_07725 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJD35_07720 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJD35_07715 NADH-quinone oxidoreductase subunit E K00127 fdoI; formate dehydrogenase subunit gamma
D CJD35_07730 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D CJD35_14585 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJD35_19520 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CJD35_14815 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJD35_03410 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D CJD35_01610 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJD35_13240 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CJD35_02935 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJD35_02515 glpX; fructose-bisphosphatase class II K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D CJD35_17815 methylamine dehydrogenase (amicyanin) light chain K15228 mauA; methylamine dehydrogenase light chain [EC:1.4.9.1]
D CJD35_17800 methylamine dehydrogenase K15229 mauB; methylamine dehydrogenase heavy chain [EC:1.4.9.1]
D CJD35_17865 peaA; quinohemoprotein amine dehydrogenase subunit alpha K08685 qhpA; quinohemoprotein amine dehydrogenase [EC:1.4.9.1]
D CJD35_15390 TIGR03857 family LLM class F420-dependent oxidoreductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D CJD35_15495 LLM class flavin-dependent oxidoreductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D CJD35_03650 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJD35_00955 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CJD35_07120 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_17110 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_07115 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJD35_14720 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CJD35_15490 fbiC; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D CJD35_15470 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D CJD35_15475 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D CJD35_15480 cofE; F420-0--gamma-glutamyl ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:shyd00910]
D CJD35_17000 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CJD35_17020 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D CJD35_17010 nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D CJD35_17015 nirD; nitrite reductase (NAD(P)H) small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D CJD35_20150 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D CJD35_00820 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CJD35_10795 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CJD35_18355 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CJD35_21470 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CJD35_17190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_13395 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_06725 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJD35_06715 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJD35_14145 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D CJD35_10110 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:shyd00920]
D CJD35_15595 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CJD35_08955 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CJD35_08950 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CJD35_08960 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJD35_11960 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D CJD35_06190 quinoprotein dehydrogenase-associated SoxYZ-like carrier K17226 soxY; sulfur-oxidizing protein SoxY
D CJD35_11970 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D CJD35_17300 TIGR01244 family protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D CJD35_06995 sseA; sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CJD35_00835 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJD35_10385 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJD35_01800 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJD35_04280 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CJD35_12190 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CJD35_01935 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D CJD35_00455 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:shyd00061]
D CJD35_01440 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJD35_09025 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_06250 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_06405 hypothetical protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJD35_09020 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJD35_06255 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJD35_12325 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJD35_11150 acyl carrier protein K02078 acpP; acyl carrier protein
D CJD35_10535 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D CJD35_11680 acyl carrier protein K02078 acpP; acyl carrier protein
D CJD35_11130 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJD35_03435 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJD35_11155 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJD35_15535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_15690 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_20595 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_01480 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJD35_07185 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJD35_02185 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CJD35_00225 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_04920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_06360 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:shyd00071]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_06825 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CJD35_06855 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CJD35_15600 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CJD35_15725 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CJD35_15545 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D CJD35_00225 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_04920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_06360 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_19660 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D CJD35_11180 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D CJD35_15685 pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D CJD35_01340 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_18215 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_12525 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_21330 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:shyd00100]
D CJD35_07600 sterol desaturase K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:shyd00561]
D CJD35_19520 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CJD35_14925 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17920 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CJD35_03440 phosphate acetyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJD35_12900 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJD35_04295 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJD35_00235 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:shyd00564]
D CJD35_03760 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CJD35_17925 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CJD35_12900 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJD35_04295 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJD35_11065 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D CJD35_03465 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CJD35_10930 phospholipid methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D CJD35_01505 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CJD35_01540 CDP-diacylglycerol O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJD35_00860 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CJD35_08090 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D CJD35_12875 S-adenosylmethionine--diacylglycerol 3-amino-3-carboxypropyl transferase K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
D CJD35_12880 SAM-dependent methyltransferase K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:shyd01040]
D CJD35_16730 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CJD35_06465 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CJD35_04605 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CJD35_13415 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:shyd00230]
D CJD35_09100 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CJD35_12605 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CJD35_03720 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJD35_12725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJD35_04800 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CJD35_07500 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJD35_01390 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CJD35_13885 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CJD35_13890 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJD35_07505 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CJD35_00945 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D CJD35_00950 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CJD35_13870 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CJD35_00050 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJD35_03825 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJD35_02970 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJD35_00145 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJD35_04435 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJD35_09460 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJD35_09505 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJD35_02040 rdgB; non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CJD35_17430 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D CJD35_17435 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D CJD35_18325 aldehyde oxidase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D CJD35_06205 xanthine dehydrogenase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D CJD35_21440 aldehyde oxidase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D CJD35_18320 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D CJD35_06210 molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D CJD35_21435 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D CJD35_18315 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D CJD35_06215 aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D CJD35_21430 (2Fe-2S)-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D CJD35_06815 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJD35_17210 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJD35_17445 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CJD35_08475 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CJD35_03530 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJD35_03540 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJD35_10490 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D CJD35_09325 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJD35_07525 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJD35_08490 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJD35_07135 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJD35_17490 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CJD35_13075 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D CJD35_17450 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D CJD35_08655 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJD35_13205 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CJD35_08955 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CJD35_08950 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CJD35_17420 NAD(P)/FAD-dependent oxidoreductase K22879 hpyO; FAD-dependent urate hydroxylase [EC:1.14.13.113]
D CJD35_17425 uraH; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D CJD35_17415 uraD; OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D CJD35_17405 allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D CJD35_17395 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CJD35_17400 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D CJD35_17390 gamma-glutamyltransferase family protein K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:shyd00240]
D CJD35_14855 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJD35_14865 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJD35_10725 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJD35_10720 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJD35_08330 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJD35_06030 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CJD35_08270 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CJD35_00080 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CJD35_01520 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CJD35_09505 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJD35_13205 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CJD35_05670 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CJD35_04045 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CJD35_01280 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CJD35_12230 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CJD35_00145 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJD35_11935 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CJD35_11930 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CJD35_03530 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJD35_03540 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJD35_13170 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CJD35_08835 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CJD35_01235 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CJD35_13315 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CJD35_06300 flavin reductase K09024 rutF; flavin reductase [EC:1.5.1.-]
D CJD35_15715 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:shyd00250]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_10180 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJD35_05070 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CJD35_11750 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CJD35_08060 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CJD35_08225 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJD35_07645 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJD35_07135 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJD35_00050 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJD35_10725 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJD35_17735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_14970 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_19605 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16580 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16755 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_06725 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJD35_06715 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJD35_10795 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CJD35_18355 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CJD35_21470 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CJD35_17190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_13395 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_14855 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJD35_14865 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJD35_14090 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CJD35_13890 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJD35_01560 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJD35_12725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:shyd00260]
D CJD35_04520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_02190 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_13050 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJD35_02505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJD35_10310 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D CJD35_02065 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CJD35_08310 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CJD35_03670 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CJD35_14585 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJD35_16485 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D CJD35_19520 hypothetical protein K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D CJD35_00955 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CJD35_14925 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D CJD35_07120 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_17110 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_07115 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJD35_14720 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CJD35_12885 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D CJD35_10505 aminomethyl-transferring glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CJD35_10510 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CJD35_10495 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_10500 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D CJD35_01540 CDP-diacylglycerol O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJD35_11800 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJD35_11310 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJD35_12185 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJD35_12330 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJD35_12335 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CJD35_04535 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D CJD35_04540 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D CJD35_04530 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D CJD35_04525 thpD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
D CJD35_15030 hypothetical protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:shyd00270]
D CJD35_00835 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJD35_10385 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJD35_01800 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJD35_06990 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJD35_09405 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CJD35_09410 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CJD35_16330 epoxyalkane--coenzyme M transferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJD35_17065 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJD35_00435 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJD35_15240 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CJD35_19295 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CJD35_15250 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CJD35_17385 phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CJD35_02965 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CJD35_04435 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJD35_05985 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CJD35_11820 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CJD35_13090 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CJD35_04520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_02190 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_13050 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJD35_02505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJD35_04280 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D CJD35_12190 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D CJD35_03665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJD35_04880 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CJD35_07775 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_06995 sseA; sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CJD35_01610 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJD35_07120 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_17110 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_07115 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:shyd00280]
D CJD35_03665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJD35_13310 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D CJD35_13305 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D CJD35_13300 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_06855 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CJD35_15600 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CJD35_15725 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D CJD35_11275 acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_12975 acetyl/propionyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D CJD35_12955 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D CJD35_12960 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CJD35_15615 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D CJD35_12965 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CJD35_11795 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CJD35_10900 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CJD35_15305 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D CJD35_10920 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_11295 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D CJD35_11285 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D CJD35_09040 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CJD35_06335 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D CJD35_09050 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CJD35_06330 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:shyd00290]
D CJD35_11800 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJD35_11310 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJD35_12185 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJD35_02125 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJD35_02120 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJD35_12175 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CJD35_14730 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14985 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14740 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJD35_14745 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJD35_01320 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJD35_03665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJD35_14755 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:shyd00300]
D CJD35_02505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJD35_04520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_02190 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_13050 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJD35_02880 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJD35_00540 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CJD35_07095 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CJD35_03050 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJD35_06970 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CJD35_08930 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJD35_09200 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJD35_11695 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CJD35_07655 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CJD35_10420 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJD35_10425 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:shyd00310]
D CJD35_01595 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_14970 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_19605 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16580 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16755 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_07335 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:shyd00220]
D CJD35_03045 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CJD35_08225 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJD35_07645 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJD35_14090 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CJD35_13890 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJD35_17190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_13395 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_14855 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJD35_14865 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJD35_10795 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D CJD35_18355 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CJD35_21470 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_13135 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D CJD35_07535 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CJD35_00190 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CJD35_03050 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:shyd00330]
D CJD35_11850 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CJD35_11845 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CJD35_12845 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D CJD35_19295 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CJD35_15250 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CJD35_15240 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CJD35_12850 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_12690 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D CJD35_12685 succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D CJD35_11985 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D CJD35_12020 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D CJD35_10175 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CJD35_10625 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJD35_04235 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CJD35_14255 oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D CJD35_14015 peptidyl prolyl 4-hydroxylase subunit alpha K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D CJD35_02580 2OG-Fe(II) oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_07335 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:shyd00340]
D CJD35_03985 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CJD35_07125 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CJD35_08405 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D CJD35_14510 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CJD35_16955 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CJD35_08420 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CJD35_08425 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CJD35_08415 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CJD35_08430 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CJD35_04285 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09420 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_03705 histidinol phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D CJD35_03990 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:shyd00350]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_04285 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09420 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_07375 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CJD35_07380 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CJD35_07960 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D CJD35_07385 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CJD35_15010 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D CJD35_16660 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D CJD35_01340 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_18215 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_12525 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_21330 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_19590 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D CJD35_16830 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D CJD35_17735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_14970 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_19605 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16580 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16755 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_17590 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CJD35_07950 gtdA; gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D CJD35_07955 FAA hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:shyd00360]
D CJD35_07370 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CJD35_15010 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D CJD35_16660 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D CJD35_17640 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CJD35_20755 hypothetical protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CJD35_06390 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CJD35_06955 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_06265 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CJD35_04705 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_04285 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09420 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_17590 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CJD35_07375 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CJD35_17530 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D CJD35_07335 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CJD35_19660 pyridine nucleotide-disulfide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D CJD35_11180 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D CJD35_15015 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:shyd00380]
D CJD35_07130 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D CJD35_06485 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D CJD35_01595 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_02530 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:shyd00400]
D CJD35_08755 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJD35_01465 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CJD35_09030 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CJD35_05675 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CJD35_06445 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D CJD35_01460 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CJD35_12240 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CJD35_07200 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CJD35_01300 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJD35_14285 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CJD35_14295 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D CJD35_12340 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CJD35_14300 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CJD35_12330 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJD35_12335 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CJD35_10565 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D CJD35_04290 cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D CJD35_07595 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_04285 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09420 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_07370 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:shyd00410]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_05650 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_10920 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:shyd00430]
D CJD35_04650 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CJD35_08060 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D CJD35_10795 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D CJD35_13190 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:shyd00450]
D CJD35_06990 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJD35_09405 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CJD35_09410 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CJD35_16330 epoxyalkane--coenzyme M transferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJD35_17065 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJD35_05985 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CJD35_06070 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D CJD35_11675 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CJD35_08955 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CJD35_08950 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CJD35_13180 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:shyd00460]
D CJD35_07975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D CJD35_04650 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CJD35_10180 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJD35_14585 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:shyd00470]
D CJD35_17525 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJD35_07335 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CJD35_10465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJD35_14090 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CJD35_13890 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJD35_12890 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJD35_10435 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJD35_02465 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D CJD35_09200 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJD35_11695 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CJD35_07655 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CJD35_11070 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D CJD35_01690 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D CJD35_17530 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:shyd00480]
D CJD35_04650 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CJD35_03350 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D CJD35_04880 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D CJD35_07775 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D CJD35_00175 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJD35_09495 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJD35_05880 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CJD35_00270 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_01065 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_13230 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_09515 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_02130 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_03645 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_03525 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_15805 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_07050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_17600 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_17605 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_00410 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_12940 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D CJD35_01550 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CJD35_00485 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CJD35_00975 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D CJD35_13080 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D CJD35_12845 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D CJD35_19295 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D CJD35_15250 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:shyd00540]
D CJD35_08140 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJD35_04230 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJD35_08145 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJD35_12345 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:shyd00541]
D CJD35_03865 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJD35_22110 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_10850 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_03870 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJD35_05575 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D CJD35_08135 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D CJD35_22160 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CJD35_22150 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CJD35_22145 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CJD35_11230 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CJD35_22155 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D CJD35_11215 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D CJD35_11220 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D CJD35_18775 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CJD35_05570 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CJD35_22240 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D CJD35_05635 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CJD35_18790 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D CJD35_18770 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CJD35_01570 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJD35_13915 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CJD35_13905 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:shyd00550]
D CJD35_02240 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJD35_10460 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJD35_10450 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJD35_10435 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJD35_10420 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJD35_10465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJD35_10425 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJD35_01510 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJD35_06710 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJD35_10430 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJD35_10445 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJD35_00690 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CJD35_05820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_00875 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_02340 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_12555 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJD35_10415 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJD35_13165 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:shyd00552]
D CJD35_06710 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJD35_06605 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:shyd00543]
D CJD35_06595 sugar transferase K20997 pslA; polysaccharide biosynthesis protein PslA
D CJD35_11755 sugar transferase K20997 pslA; polysaccharide biosynthesis protein PslA
D CJD35_00835 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:shyd00730]
D CJD35_04195 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CJD35_10260 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CJD35_14560 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_14565 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_18420 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_21535 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_00910 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJD35_09035 thiS; thiamine biosynthesis protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CJD35_05765 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJD35_13235 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJD35_04000 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CJD35_17880 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CJD35_08655 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJD35_17550 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:shyd00740]
D CJD35_05585 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJD35_03910 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJD35_03920 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJD35_03905 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CJD35_03915 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CJD35_00930 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CJD35_15595 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D CJD35_09100 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:shyd00750]
D CJD35_07165 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D CJD35_07115 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJD35_09480 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CJD35_08265 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CJD35_02065 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CJD35_08310 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:shyd00760]
D CJD35_07795 quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CJD35_19405 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CJD35_19650 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CJD35_07800 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CJD35_00145 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJD35_06130 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CJD35_13205 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CJD35_04825 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CJD35_03725 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CJD35_14130 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CJD35_00740 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CJD35_14080 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D CJD35_11000 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D CJD35_11010 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D CJD35_11015 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D CJD35_17735 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_14970 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_19605 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16580 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D CJD35_16755 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:shyd00770]
D CJD35_14730 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14985 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJD35_14740 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJD35_14745 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJD35_01320 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJD35_09665 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CJD35_05650 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CJD35_14370 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CJD35_08840 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CJD35_13205 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D CJD35_01365 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CJD35_05680 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CJD35_08260 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CJD35_03665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:shyd00780]
D CJD35_01400 SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CJD35_11155 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJD35_15535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_15690 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_20595 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_01480 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJD35_07185 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJD35_10530 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJD35_04020 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJD35_04035 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJD35_04025 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CJD35_12970 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D CJD35_06275 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D CJD35_14375 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:shyd00785]
D CJD35_03010 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D CJD35_14140 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_14805 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_19890 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D CJD35_14800 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_19885 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D CJD35_13420 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CJD35_19880 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CJD35_01600 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D CJD35_01595 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D CJD35_13310 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D CJD35_13305 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D CJD35_13300 branched-chain alpha-keto acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D CJD35_10505 aminomethyl-transferring glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CJD35_10510 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CJD35_10495 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CJD35_10500 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:shyd00790]
D CJD35_10875 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CJD35_07070 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CJD35_08040 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CJD35_12590 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CJD35_14615 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CJD35_10980 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CJD35_00940 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CJD35_12320 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CJD35_05585 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJD35_03910 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJD35_08785 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D CJD35_08790 aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D CJD35_10590 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CJD35_07370 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D CJD35_03025 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJD35_03030 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJD35_07005 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJD35_14075 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJD35_19625 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJD35_14305 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJD35_12795 moaB; molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CJD35_14310 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CJD35_19530 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CJD35_10870 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CJD35_07705 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:shyd00670]
D CJD35_00940 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D CJD35_07555 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CJD35_16390 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CJD35_14585 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJD35_07500 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJD35_03825 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJD35_09810 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJD35_10495 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CJD35_09405 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CJD35_09410 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CJD35_13315 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CJD35_16385 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CJD35_09400 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CJD35_16380 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CJD35_13270 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:shyd00860]
D CJD35_12885 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D CJD35_03730 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_14325 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_00515 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJD35_03745 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CJD35_05660 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CJD35_02995 oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D CJD35_12430 hemN; radical SAM protein K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CJD35_05655 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CJD35_01755 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CJD35_07660 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D CJD35_11980 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CJD35_17025 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D CJD35_08285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CJD35_01670 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CJD35_04345 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D CJD35_04360 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D CJD35_02265 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CJD35_12660 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CJD35_01415 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:shyd00130]
D CJD35_17615 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D CJD35_04870 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CJD35_02195 bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D CJD35_08860 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CJD35_06100 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D CJD35_06470 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CJD35_11870 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CJD35_06455 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CJD35_16295 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D CJD35_07375 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:shyd00900]
D CJD35_00910 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJD35_01500 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CJD35_14125 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D CJD35_12820 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CJD35_05625 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CJD35_10315 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_01370 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CJD35_10560 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJD35_01510 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:shyd00906]
D CJD35_07295 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CJD35_07285 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D CJD35_07280 crtY; lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D CJD35_06980 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:shyd00903]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15845 nuclear transport factor 2 family protein K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8]
D CJD35_15865 hypothetical protein K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8]
C 00907 Pinene, camphor and geraniol degradation [PATH:shyd00907]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CJD35_13255 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D CJD35_11235 NAD(P)-dependent oxidoreductase K21214 ncsC4; NDP-hexose 4-ketoreductase
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:shyd00523]
D CJD35_22160 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CJD35_22150 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CJD35_22145 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CJD35_11230 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CJD35_22155 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D CJD35_14600 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D CJD35_22150 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:shyd00946]
D CJD35_07975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids [PATH:shyd00996]
D CJD35_16325 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61]
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D CJD35_14550 SGM family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_07475 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_08110 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:shyd00332]
D CJD35_10625 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJD35_04235 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:shyd00261]
D CJD35_08955 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D CJD35_08950 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D CJD35_04520 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_02190 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJD35_13050 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJD35_02880 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJD35_00540 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:shyd00521]
D CJD35_00495 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D CJD35_12605 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CJD35_04815 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CJD35_14450 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CJD35_22160 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CJD35_22150 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CJD35_22145 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CJD35_11230 dTDP-4-keto-6-deoxy-D-glucose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D CJD35_22155 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CJD35_00495 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:shyd00525]
D CJD35_22160 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CJD35_22150 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:shyd00401]
D CJD35_04290 cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_04285 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09420 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CJD35_01300 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJD35_14285 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CJD35_11130 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJD35_15535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_15690 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_20595 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_07185 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CJD35_11150 acyl carrier protein K02078 acpP; acyl carrier protein
D CJD35_10535 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D CJD35_11680 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:shyd00999]
D CJD35_00435 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJD35_05675 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CJD35_07975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:shyd00362]
D CJD35_06295 3-oxoadipate CoA-transferase K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D CJD35_06290 3-oxoadipate CoA-transferase K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D CJD35_06520 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D CJD35_15015 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CJD35_06490 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D CJD35_06515 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D CJD35_06510 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D CJD35_06485 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D CJD35_01260 isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJD35_06505 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJD35_06495 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D CJD35_15750 hypothetical protein K20942 graA; resorcinol 4-hydroxylase (FADH2) [EC:1.14.14.27]
D CJD35_14965 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CJD35_15340 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D CJD35_19575 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D CJD35_16820 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D CJD35_19580 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D CJD35_16825 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D CJD35_19590 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D CJD35_16830 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D CJD35_19540 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D CJD35_16790 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D CJD35_19545 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D CJD35_16795 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D CJD35_19565 amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D CJD35_16815 amidohydrolase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D CJD35_19550 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CJD35_16800 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D CJD35_16855 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D CJD35_17615 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_06825 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_06265 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CJD35_04705 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:shyd00627]
D CJD35_17730 amidohydrolase K15063 ligW; 5-carboxyvanillate decarboxylase
D CJD35_19575 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D CJD35_16820 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D CJD35_19580 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D CJD35_16825 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D CJD35_19590 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D CJD35_16830 gfo/Idh/MocA family oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D CJD35_19540 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D CJD35_16790 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D CJD35_16370 glycine cleavage system protein T K15064 desA; syringate O-demethylase [EC:2.1.1.-]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:shyd00364]
D CJD35_05845 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CJD35_16765 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:shyd00625]
D CJD35_01340 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_18215 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_12525 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_21330 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_17595 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_08030 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_16570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_15955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_17570 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CJD35_21310 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CJD35_12510 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CJD35_18195 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D CJD35_06150 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CJD35_12410 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D CJD35_16490 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:shyd00361]
D CJD35_05845 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CJD35_16765 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CJD35_14915 TauD/TfdA family dioxygenase K06912 tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase [EC:1.14.11.-]
D CJD35_06520 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D CJD35_16490 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:shyd00623]
D CJD35_17590 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CJD35_05845 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D CJD35_16765 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:shyd00622]
D CJD35_17590 NAD(P)-dependent alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D CJD35_06520 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
D CJD35_06485 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D CJD35_01260 isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJD35_06505 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJD35_06495 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D CJD35_06490 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D CJD35_06515 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D CJD35_06510 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
D CJD35_15015 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:shyd00633]
D CJD35_03900 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:shyd00643]
D CJD35_15010 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D CJD35_16660 betaine-aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D CJD35_07380 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D CJD35_07960 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D CJD35_07385 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CJD35_06520 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:shyd00930]
D CJD35_15945 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CJD35_10885 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D CJD35_10855 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D CJD35_15550 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:shyd00621]
D CJD35_01260 isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJD35_06505 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJD35_06495 dmpH; 2-oxo-3-hexenedioate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77]
D CJD35_15015 hypothetical protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D CJD35_06490 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132]
D CJD35_06515 dmpG; 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43]
D CJD35_06510 acetaldehyde dehydrogenase (acetylating) K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87]
C 00626 Naphthalene degradation [PATH:shyd00626]
D CJD35_01340 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_18215 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_12525 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D CJD35_21330 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:shyd00624]
D CJD35_19645 MarR family transcriptional regulator K18068 pht3; phthalate 4,5-dioxygenase [EC:1.14.12.7]
D CJD35_19410 MarR family transcriptional regulator K18068 pht3; phthalate 4,5-dioxygenase [EC:1.14.12.7]
D CJD35_19640 gfo/Idh/MocA family oxidoreductase K18067 pht4; phthalate 4,5-cis-dihydrodiol dehydrogenase [EC:1.3.1.64]
D CJD35_19415 gfo/Idh/MocA family oxidoreductase K18067 pht4; phthalate 4,5-cis-dihydrodiol dehydrogenase [EC:1.3.1.64]
D CJD35_19400 4,5-dihydroxyphthalate decarboxylase K04102 pht5; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
D CJD35_19420 4,5-dihydroxyphthalate decarboxylase K04102 pht5; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
D CJD35_19635 4,5-dihydroxyphthalate decarboxylase K04102 pht5; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
D CJD35_19575 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D CJD35_16820 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D CJD35_19580 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D CJD35_16825 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:shyd00984]
D CJD35_15040 flavin-dependent monooxygenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D CJD35_05930 flavin reductase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D CJD35_06880 short-chain dehydrogenase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51]
D CJD35_00570 short-chain dehydrogenase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:shyd03020]
D CJD35_01820 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJD35_01825 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJD35_06785 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJD35_08095 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:shyd03010]
D CJD35_12225 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CJD35_01530 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CJD35_08580 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CJD35_14605 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CJD35_08635 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CJD35_11090 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CJD35_08530 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CJD35_08620 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CJD35_01655 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CJD35_08545 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CJD35_06780 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CJD35_08525 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CJD35_06775 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CJD35_08615 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CJD35_01225 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CJD35_09225 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CJD35_08595 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CJD35_11085 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CJD35_08570 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CJD35_08870 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CJD35_03280 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CJD35_10690 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CJD35_08565 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CJD35_08550 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CJD35_08555 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CJD35_08610 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CJD35_08625 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CJD35_09315 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJD35_11080 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CJD35_09320 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CJD35_10695 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CJD35_01660 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CJD35_08600 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CJD35_08645 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CJD35_08585 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CJD35_06790 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CJD35_08630 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CJD35_09255 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CJD35_03695 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CJD35_10665 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CJD35_08575 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CJD35_08560 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CJD35_08605 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CJD35_12615 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CJD35_10660 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CJD35_09370 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CJD35_08590 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CJD35_08640 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CJD35_01475 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CJD35_03445 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CJD35_04385 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CJD35_02365 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CJD35_03700 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CJD35_02090 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CJD35_16250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_16860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_04585 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_04570 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_16875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_16235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_04565 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_16230 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_16880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:shyd00970]
D CJD35_04575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_16870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_16240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_11305 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_12250 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_12255 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_12650 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_12655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_09795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_10025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_00555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_14085 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJD35_13285 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJD35_13280 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJD35_09590 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJD35_10765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJD35_01835 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJD35_12090 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJD35_02830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJD35_00795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJD35_08205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJD35_06220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJD35_14515 tRNA-His K14226 tRNA-His; tRNA His
D CJD35_04580 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJD35_16865 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJD35_16245 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJD35_04960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_00480 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_12215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_06735 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_00720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_14620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJD35_12545 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJD35_11645 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_12390 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_04560 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_16225 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_16885 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_04060 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJD35_13325 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJD35_06670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJD35_14170 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJD35_05910 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_07045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_08050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_13150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_11190 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJD35_03600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJD35_13465 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJD35_10710 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJD35_02200 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJD35_07325 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJD35_02960 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJD35_13040 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJD35_03730 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_14325 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_14690 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJD35_14680 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJD35_14695 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJD35_13225 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJD35_02910 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJD35_12630 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJD35_12635 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJD35_08815 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJD35_00140 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJD35_07450 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJD35_13180 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJD35_09810 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJD35_09615 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJD35_05785 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJD35_00925 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJD35_02590 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D CJD35_13015 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJD35_04635 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJD35_03685 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJD35_03680 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJD35_14025 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJD35_08895 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:shyd03060]
D CJD35_08650 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJD35_10705 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJD35_01285 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJD35_06680 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CJD35_06685 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CJD35_06675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJD35_02380 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJD35_13140 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_12075 RNA helicase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_08905 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CJD35_09220 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJD35_14545 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D CJD35_09190 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJD35_10360 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D CJD35_10365 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJD35_10370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJD35_08255 lepB; S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJD35_12930 lepB; S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJD35_00920 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:shyd04122]
D CJD35_14560 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_14565 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_18420 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_21535 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_06995 sseA; sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CJD35_09645 redox protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CJD35_03975 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJD35_14075 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJD35_19625 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJD35_00855 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D CJD35_08825 molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CJD35_14305 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJD35_12795 moaB; molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:shyd03018]
D CJD35_12705 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJD35_02350 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CJD35_14815 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJD35_00605 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CJD35_10685 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CJD35_07250 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CJD35_05830 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJD35_14365 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJD35_05425 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D CJD35_01950 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJD35_18765 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_14095 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CJD35_07520 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJD35_13820 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:shyd03030]
D CJD35_05685 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_02635 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_12785 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJD35_14540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJD35_13175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJD35_05795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJD35_09500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CJD35_11520 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_04160 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_11950 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJD35_14880 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJD35_11505 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJD35_02650 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJD35_18970 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21950 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_19975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21085 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_10305 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJD35_10265 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJD35_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CJD35_01195 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:shyd03410]
D CJD35_00545 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJD35_08105 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJD35_04830 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJD35_08865 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CJD35_02220 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CJD35_03375 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJD35_12805 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJD35_09945 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_18045 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_05590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_21160 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CJD35_01195 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:shyd03420]
D CJD35_14050 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJD35_18205 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_10800 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_12520 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_21320 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_03570 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D CJD35_12165 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D CJD35_12270 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJD35_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CJD35_01195 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:shyd03430]
D CJD35_05940 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CJD35_12575 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D CJD35_12270 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJD35_04795 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJD35_01375 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJD35_18970 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21950 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_19975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21085 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_12785 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJD35_11520 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_04160 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_14540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJD35_05795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJD35_13175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJD35_05685 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_02635 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_09500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CJD35_01195 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJD35_11345 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:shyd03440]
D CJD35_18970 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21950 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_19975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21085 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_04100 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CJD35_12170 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CJD35_09815 recombination protein RecR K06187 recR; recombination protein RecR
D CJD35_02855 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D CJD35_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CJD35_04905 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJD35_04915 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJD35_02000 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJD35_14040 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJD35_12785 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJD35_11520 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_04160 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_14540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJD35_05795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJD35_13175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJD35_05685 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_02635 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_09500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CJD35_09780 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:shyd03450]
D CJD35_17950 Ku protein K10979 ku; DNA end-binding protein Ku
D CJD35_17960 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CJD35_18040 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CJD35_21155 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:shyd03250]
D CJD35_08880 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CJD35_04065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:shyd02010]
D CJD35_09075 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CJD35_00560 molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D CJD35_00565 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJD35_05955 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJD35_03345 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJD35_05965 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJD35_03330 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJD35_05960 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJD35_09850 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CJD35_09845 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CJD35_09840 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CJD35_09835 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJD35_22290 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D CJD35_22295 capsule biosynthesis protein K09688 kpsM; capsular polysaccharide transport system permease protein
D CJD35_22300 ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJD35_12775 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D CJD35_12780 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CJD35_12735 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D CJD35_10575 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B
D CJD35_10580 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CJD35_09965 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D CJD35_09970 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D CJD35_07360 lptB; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJD35_04310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CJD35_03575 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CJD35_04460 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS) [PATH:shyd02060]
D CJD35_09290 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CJD35_09295 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CJD35_09430 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D CJD35_05695 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:shyd03070]
D CJD35_09600 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_06625 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_12080 type I secretion protein TolC K12340 tolC; outer membrane protein
D CJD35_14245 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D CJD35_14250 secretion system protein C K02452 gspC; general secretion pathway protein C
D CJD35_14235 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D CJD35_14230 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D CJD35_14225 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D CJD35_14220 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D CJD35_14215 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D CJD35_14210 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D CJD35_14205 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L
D CJD35_14200 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D CJD35_14240 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJD35_06680 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CJD35_06685 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CJD35_10705 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJD35_01285 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJD35_08650 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJD35_06675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJD35_02380 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJD35_13140 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_12075 RNA helicase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_09190 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJD35_08905 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CJD35_09220 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJD35_10360 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D CJD35_10365 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJD35_10370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJD35_20895 hypothetical protein K03194 virB1; type IV secretion system protein VirB1
D CJD35_21850 hypothetical protein K03194 virB1; type IV secretion system protein VirB1
D CJD35_21855 hypothetical protein K03197 virB2; type IV secretion system protein VirB2
D CJD35_20885 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3
D CJD35_21860 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3
D CJD35_20875 type IV secretion system protein VirB5 K03200 virB5; type IV secretion system protein VirB5
D CJD35_21870 type IV secretion system protein VirB5 K03200 virB5; type IV secretion system protein VirB5
D CJD35_20850 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9
D CJD35_21890 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9
D CJD35_20865 type IV secretion system protein VirB6 K03201 virB6; type IV secretion system protein VirB6
D CJD35_21880 type IV secretion system protein VirB6 K03201 virB6; type IV secretion system protein VirB6
D CJD35_20855 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D CJD35_21885 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D CJD35_20845 hypothetical protein K03195 virB10; type IV secretion system protein VirB10
D CJD35_21895 type IV secretion system protein VirB10 K03195 virB10; type IV secretion system protein VirB10
D CJD35_20880 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D CJD35_21865 transporter K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D CJD35_20840 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJD35_21900 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJD35_05265 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CJD35_20835 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CJD35_21905 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:shyd02020]
D CJD35_09855 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CJD35_09825 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CJD35_08040 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CJD35_12590 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D CJD35_09850 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CJD35_19310 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_01785 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_03155 flagellin FliC K02406 fliC; flagellin
D CJD35_03170 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D CJD35_03205 flagellar motor protein K02556 motA; chemotaxis protein MotA
D CJD35_03265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CJD35_01670 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CJD35_17155 glycoside hydrolase 68 family protein K00692 sacB; levansucrase [EC:2.4.1.10]
D CJD35_08875 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJD35_07880 GNAT family N-acetyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D CJD35_07820 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D CJD35_07825 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D CJD35_15225 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D CJD35_01425 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D CJD35_01430 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D CJD35_11050 secretion system protein K02280 cpaC; pilus assembly protein CpaC
D CJD35_11040 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CJD35_09705 flagellar protein FlaI K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CJD35_11030 pilus assembly protein TadC K12511 tadC; tight adherence protein C
D CJD35_12665 hypothetical protein K27080 tadG; tight adherence protein G
D CJD35_05945 bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CJD35_13390 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1
D CJD35_14115 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CJD35_14110 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CJD35_17190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_13395 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_14105 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CJD35_14100 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17140 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CJD35_17145 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CJD35_02955 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJD35_17125 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJD35_07355 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CJD35_09150 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_18500 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_20725 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_03415 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_03500 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_07855 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_14005 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_09135 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CJD35_09130 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJD35_09140 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJD35_18505 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_09145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_20730 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_02865 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D CJD35_00665 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT
D CJD35_18345 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CJD35_11885 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CJD35_21460 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CJD35_02950 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D CJD35_18075 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_13995 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_21190 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_18070 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_13990 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_21185 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_16540 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_03150 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D CJD35_17250 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CJD35_01150 enoyl-CoA hydratase K13816 rpfF; DSF synthase
D CJD35_14090 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CJD35_00785 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CJD35_00790 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D CJD35_02985 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJD35_02980 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJD35_02975 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJD35_17760 cytochrome c family protein K08738 CYC; cytochrome c
D CJD35_07590 cytochrome c family protein K08738 CYC; cytochrome c
D CJD35_12265 histidine kinase K08738 CYC; cytochrome c
D CJD35_13980 ccoN; cytochrome c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJD35_13975 ccoO; cytochrome c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJD35_13970 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJD35_13965 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJD35_17290 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJD35_17285 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJD35_09600 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_06625 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_12080 type I secretion protein TolC K12340 tolC; outer membrane protein
D CJD35_22140 capsule biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_13900 polysaccharide transporter K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_11700 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_06600 polysaccharide biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_03425 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CJD35_05915 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D CJD35_13915 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CJD35_13905 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D CJD35_04980 histidine kinase K07165 fecR; transmembrane sensor
D CJD35_00735 hypothetical protein K07165 fecR; transmembrane sensor
D CJD35_14665 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor
D CJD35_06160 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CJD35_09640 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D CJD35_03190 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CJD35_01985 chemotaxis protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:shyd04148]
D CJD35_12845 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D CJD35_02985 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:shyd02024]
D CJD35_14095 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CJD35_01300 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJD35_14285 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D CJD35_08755 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJD35_05275 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D CJD35_05280 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D CJD35_20890 hypothetical protein K20528 trbC; type IV secretion system protein TrbC
D CJD35_05285 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD
D CJD35_05290 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D CJD35_05295 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D CJD35_05300 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D CJD35_05305 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D CJD35_05310 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D CJD35_05315 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D CJD35_01150 enoyl-CoA hydratase K13816 rpfF; DSF synthase
D CJD35_12055 hypothetical protein K20276 bapA; large repetitive protein
D CJD35_00225 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_04920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_06360 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_17250 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CJD35_00905 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D CJD35_16960 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D CJD35_05585 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJD35_03920 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJD35_17785 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_00580 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_16500 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CJD35_07815 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CJD35_16505 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CJD35_16515 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CJD35_02380 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJD35_10705 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJD35_01285 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJD35_08650 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJD35_06675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJD35_13140 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_12075 RNA helicase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_09190 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJD35_08905 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CJD35_09220 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:shyd02030]
D CJD35_03415 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_03500 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_07855 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_14005 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_09130 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJD35_09135 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CJD35_09140 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJD35_18505 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_09145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_20730 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_09150 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_18500 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_20725 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_03135 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJD35_03105 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJD35_03100 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJD35_03205 flagellar motor protein K02556 motA; chemotaxis protein MotA
D CJD35_03265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CJD35_03270 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJD35_05135 hypothetical protein K02557 motB; chemotaxis protein MotB
D CJD35_01985 chemotaxis protein
C 02040 Flagellar assembly [PATH:shyd02040]
D CJD35_03145 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJD35_21735 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJD35_03140 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CJD35_03135 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJD35_03130 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH
D CJD35_03125 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJD35_03115 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CJD35_03110 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CJD35_03105 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJD35_03100 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJD35_03095 flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CJD35_03090 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJD35_03085 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJD35_03080 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJD35_03175 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJD35_03075 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJD35_03195 flagellar protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJD35_03210 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJD35_03215 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJD35_03220 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJD35_03225 flagellar biosynthesis protein FlgG K02390 flgE; flagellar hook protein FlgE
D CJD35_03230 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D CJD35_03235 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJD35_03245 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D CJD35_03250 flagellar biosynthesis protein FlgI K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJD35_03255 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CJD35_03260 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJD35_03155 flagellin FliC K02406 fliC; flagellin
D CJD35_03060 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2
D CJD35_03055 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D CJD35_03205 flagellar motor protein K02556 motA; chemotaxis protein MotA
D CJD35_03265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CJD35_03270 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJD35_05135 hypothetical protein K02557 motB; chemotaxis protein MotB
D CJD35_03190 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CJD35_14885 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJD35_07355 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CJD35_03150 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D CJD35_03170 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CJD35_14815 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:shyd04980]
D CJD35_02265 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CJD35_12965 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D CJD35_09405 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CJD35_09410 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:shyd01501]
D CJD35_12310 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CJD35_10345 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CJD35_07945 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D CJD35_02095 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D CJD35_02100 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CJD35_14550 SGM family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_07475 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_08110 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_17775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_00590 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_10150 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_17780 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_00585 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_10155 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CJD35_17785 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_00580 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_09600 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_06625 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_12080 type I secretion protein TolC K12340 tolC; outer membrane protein
D CJD35_05820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_00875 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_02340 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_12555 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJD35_10415 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJD35_04925 subclass B3 metallo-beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
D CJD35_17105 MBL fold metallo-hydrolase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:shyd01502]
D CJD35_10465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJD35_17525 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJD35_10425 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJD35_10430 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJD35_10445 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:shyd01503]
D CJD35_02345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJD35_19310 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_01785 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_08880 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CJD35_04065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CJD35_17775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_00590 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_10150 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_17780 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_00585 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_10155 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CJD35_09600 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_06625 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_12080 type I secretion protein TolC K12340 tolC; outer membrane protein
D CJD35_07880 GNAT family N-acetyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:shyd01000]
C 01001 Protein kinases [BR:shyd01001]
D CJD35_18880 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CJD35_13895 protein tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D CJD35_06575 protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D CJD35_11710 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CJD35_09855 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CJD35_07820 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D CJD35_10820 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CJD35_14115 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CJD35_14105 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CJD35_17140 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CJD35_09130 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJD35_02865 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D CJD35_18075 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_13995 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_21190 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_00785 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CJD35_06160 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CJD35_01135 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D CJD35_01215 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:shyd01009]
D CJD35_13090 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CJD35_18485 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_20710 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_16360 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_14720 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:shyd01002]
D CJD35_00920 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CJD35_14190 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJD35_11060 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CJD35_06815 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJD35_17210 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJD35_12725 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJD35_06725 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJD35_01560 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJD35_05070 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CJD35_11750 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CJD35_18200 protease K05520 yhbO; deglycase [EC:3.5.1.124]
D CJD35_02450 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D CJD35_12515 protease K05520 yhbO; deglycase [EC:3.5.1.124]
D CJD35_21315 protease K05520 yhbO; deglycase [EC:3.5.1.124]
D CJD35_14710 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D CJD35_05880 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D CJD35_13065 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D CJD35_17545 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D CJD35_00600 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CJD35_04750 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D CJD35_00175 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJD35_09495 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJD35_08965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CJD35_00970 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CJD35_12695 hypothetical protein K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D CJD35_08930 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJD35_14760 hypothetical protein K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D CJD35_17395 Zn-dependent hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D CJD35_14460 M23 family peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CJD35_13385 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CJD35_03595 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CJD35_14160 peptidase M28 family protein K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D CJD35_09455 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJD35_01495 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CJD35_12070 peptidase M50 K16922 yydH; putative peptide zinc metalloprotease protein
D CJD35_02095 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D CJD35_00670 peptidase K20110 JAMM1; desampylase [EC:3.4.19.15]
D CJD35_19310 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_01785 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_06795 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D CJD35_13045 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CJD35_03590 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D CJD35_13165 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CJD35_00705 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CJD35_14530 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CJD35_14315 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CJD35_21625 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CJD35_08255 lepB; S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJD35_12930 lepB; S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJD35_06110 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CJD35_00960 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D CJD35_08940 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CJD35_00370 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D CJD35_10075 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D CJD35_09560 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D CJD35_01865 primosome assembly protein PriA K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D CJD35_13025 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CJD35_04650 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D CJD35_17390 gamma-glutamyltransferase family protein K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D CJD35_04820 modulator protein K03592 pmbA; PmbA protein
D CJD35_13330 TldD protein K03568 tldD; TldD protein
D CJD35_07315 metalloprotease TldD K03568 tldD; TldD protein
D CJD35_01780 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D CJD35_01775 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:shyd01003]
D CJD35_17350 glycosyl transferase family 1 K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D CJD35_00235 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D CJD35_13450 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D CJD35_02435 glycosyltransferase WbuB K16150 K16150; glycogen synthase [EC:2.4.1.11]
D CJD35_00690 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CJD35_05820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_00875 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_02340 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_06605 glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CJD35_17155 glycoside hydrolase 68 family protein K00692 sacB; levansucrase [EC:2.4.1.10]
D CJD35_03070 DUF2029 domain-containing protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D CJD35_03165 glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D CJD35_13865 otsA; trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:shyd01005]
D CJD35_12345 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CJD35_04230 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJD35_08145 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJD35_08140 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJD35_09715 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CJD35_11255 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:shyd01011]
D CJD35_02240 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJD35_10460 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJD35_10450 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJD35_10435 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJD35_10420 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJD35_10465 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJD35_17525 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJD35_12890 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJD35_08940 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CJD35_10430 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJD35_10445 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJD35_06710 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJD35_08900 mviN; lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CJD35_05820 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_00875 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_02340 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJD35_12555 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJD35_10415 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJD35_13165 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CJD35_00690 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D CJD35_14710 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB
D CJD35_14460 M23 family peptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D CJD35_02885 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJD35_12800 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJD35_08915 hypothetical protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D CJD35_13155 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D CJD35_11160 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CJD35_14520 septal ring lytic transglycosylase RlpA family lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJD35_13160 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJD35_02345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:shyd01004]
D CJD35_11130 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJD35_03435 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJD35_11155 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJD35_15535 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_15690 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_20595 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJD35_01480 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJD35_07185 enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJD35_02185 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CJD35_16730 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CJD35_06465 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CJD35_04605 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CJD35_13415 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CJD35_03650 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJD35_16435 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D CJD35_06830 acyl-CoA synthetase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D CJD35_00225 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_04920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_06360 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_09000 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CJD35_20630 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CJD35_15560 AMP-dependent synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CJD35_17695 AMP-dependent synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CJD35_03440 phosphate acetyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJD35_12900 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJD35_04295 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:shyd01008]
C 01006 Prenyltransferases [BR:shyd01006]
D CJD35_01370 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D CJD35_10560 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJD35_01510 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJD35_07295 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D CJD35_14725 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJD35_04870 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CJD35_08285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:shyd01007]
D CJD35_02590 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D CJD35_03730 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_14325 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_02255 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CJD35_14025 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJD35_08895 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJD35_07450 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJD35_13180 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJD35_00925 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJD35_09615 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJD35_05785 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJD35_02910 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJD35_04635 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJD35_12630 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJD35_12635 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJD35_00140 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJD35_13015 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJD35_08815 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJD35_13225 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJD35_03685 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJD35_03680 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJD35_08795 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJD35_02550 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CJD35_06970 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D CJD35_04285 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09420 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_09425 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJD35_12885 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D CJD35_10530 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJD35_04020 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJD35_03050 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJD35_04535 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D CJD35_04035 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJD35_07335 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D CJD35_03665 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJD35_07115 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJD35_17400 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:shyd00194]
D CJD35_06475 hypothetical protein K02639 petF; ferredoxin
D CJD35_09735 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJD35_09740 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJD35_09745 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJD35_09750 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJD35_09755 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJD35_12155 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJD35_12160 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJD35_12150 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJD35_12145 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJD35_12140 F0F1 ATP synthase assembly protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:shyd03000]
D CJD35_16840 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D CJD35_15975 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CJD35_15330 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CJD35_15910 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D CJD35_09765 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CJD35_13845 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJD35_12200 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJD35_12030 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJD35_03635 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D CJD35_00845 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D CJD35_19555 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D CJD35_16805 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D CJD35_17930 DeoR/GlpR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D CJD35_03605 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJD35_07965 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJD35_07985 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJD35_00045 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CJD35_10335 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D CJD35_10300 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D CJD35_07685 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D CJD35_18230 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D CJD35_12535 TetR/AcrR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D CJD35_21345 TetR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D CJD35_01350 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D CJD35_20475 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D CJD35_04740 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D CJD35_18020 hypothetical protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D CJD35_19390 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJD35_19395 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJD35_19425 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJD35_19430 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJD35_19450 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJD35_19630 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CJD35_21970 MerR family transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D CJD35_20555 transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D CJD35_19810 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D CJD35_00635 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CJD35_00905 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D CJD35_16960 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D CJD35_16340 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D CJD35_17250 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CJD35_13985 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CJD35_02245 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CJD35_20170 Crp/Fnr family transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D CJD35_12285 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D CJD35_05485 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJD35_05490 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJD35_06765 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJD35_21595 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJD35_17030 XRE family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D CJD35_12950 XRE family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D CJD35_02145 XRE family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D CJD35_08180 XRE family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D CJD35_02100 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CJD35_14375 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CJD35_20635 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CJD35_07350 transcriptional regulator K07726 K07726; putative transcriptional regulator
D CJD35_21090 transcriptional regulator K07729 K07729; putative transcriptional regulator
D CJD35_21335 regulator K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D CJD35_18220 regulator K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D CJD35_04325 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D CJD35_05160 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_05875 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_19170 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_16110 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_16740 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_21105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_11535 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20375 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20435 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_21685 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20130 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_10190 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D CJD35_02055 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CJD35_17550 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CJD35_04700 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D CJD35_04075 PspC domain-containing protein K03973 pspC; phage shock protein C
D CJD35_04685 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D CJD35_18365 transcription elongation factor GreAB K06140 rnk; regulator of nucleoside diphosphate kinase
D CJD35_21480 transcription elongation factor GreAB K06140 rnk; regulator of nucleoside diphosphate kinase
D CJD35_05400 transcriptional regulator K07733 alpA; prophage regulatory protein
D CJD35_16205 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D CJD35_13085 hypothetical protein K07735 algH; putative transcriptional regulator
D CJD35_00120 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CJD35_14590 transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D CJD35_10400 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:shyd03021]
D CJD35_06785 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJD35_01820 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJD35_01825 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJD35_08095 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJD35_14885 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJD35_16690 RNA polymerase subunit sigma-24 K24073 cnrH; RNA polymerase sigma factor CnrH
D CJD35_21570 RNA polymerase sigma factor K24073 cnrH; RNA polymerase sigma factor CnrH
D CJD35_18840 rpoH; RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D CJD35_00680 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D CJD35_07355 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CJD35_03170 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D CJD35_01265 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJD35_03995 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CJD35_10700 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJD35_00120 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CJD35_14850 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CJD35_02890 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D CJD35_05830 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:shyd03019]
D CJD35_03630 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D CJD35_02350 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CJD35_12925 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJD35_14365 MBL fold hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJD35_00605 ATP-dependent helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CJD35_10685 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CJD35_07250 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CJD35_14815 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJD35_05830 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJD35_05425 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D CJD35_01950 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJD35_18765 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_14095 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CJD35_07520 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJD35_13820 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D CJD35_12705 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJD35_09300 RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D CJD35_10545 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:shyd03011]
D CJD35_12225 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CJD35_01530 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CJD35_08580 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CJD35_14605 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CJD35_08635 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CJD35_11090 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CJD35_08530 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CJD35_08620 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CJD35_01655 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CJD35_08545 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CJD35_06780 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CJD35_08525 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CJD35_06775 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CJD35_08615 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CJD35_01225 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CJD35_09225 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CJD35_08595 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CJD35_11085 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CJD35_08570 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CJD35_08870 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CJD35_03280 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CJD35_10690 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CJD35_08565 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CJD35_08550 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CJD35_08555 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CJD35_08610 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CJD35_08625 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CJD35_11080 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CJD35_09320 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CJD35_10695 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CJD35_09315 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJD35_01660 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CJD35_08600 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CJD35_08645 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CJD35_08585 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CJD35_06790 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CJD35_08630 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CJD35_09255 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CJD35_03695 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CJD35_10665 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CJD35_08575 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CJD35_08560 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CJD35_08605 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CJD35_10660 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CJD35_09370 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CJD35_08590 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CJD35_08640 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CJD35_01475 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CJD35_03445 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CJD35_04385 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CJD35_02365 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CJD35_03700 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CJD35_02090 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CJD35_12615 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CJD35_04565 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_16230 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_16880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_16250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_16860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_04585 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_04570 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_16875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_16235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:shyd03009]
D CJD35_12925 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJD35_03630 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D CJD35_12920 GTPase Era K03595 era; GTPase
D CJD35_10630 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D CJD35_00120 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D CJD35_01265 transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJD35_03995 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CJD35_10700 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJD35_09475 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CJD35_09465 RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CJD35_03850 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CJD35_12295 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CJD35_04875 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CJD35_05865 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJD35_10405 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CJD35_07765 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CJD35_10145 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CJD35_02205 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CJD35_08495 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D CJD35_06120 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CJD35_08315 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D CJD35_15110 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D CJD35_04150 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CJD35_12840 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CJD35_11835 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CJD35_12300 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CJD35_08355 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CJD35_00675 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJD35_08745 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D CJD35_00625 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CJD35_09230 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CJD35_00160 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CJD35_01990 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CJD35_02350 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D CJD35_14705 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CJD35_10685 ATP-dependent helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CJD35_17880 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CJD35_09650 ribosome biogenesis GTPase Der K03977 engA; GTPase
D CJD35_13220 hflX; GTPase HflX K03665 hflX; GTPase
D CJD35_00210 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CJD35_09325 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJD35_01245 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D CJD35_01270 ribosome maturation factor K09748 rimP; ribosome maturation factor RimP
D CJD35_06125 rsfS; ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein
D CJD35_00655 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D CJD35_05690 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D CJD35_12600 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:shyd03016]
D CJD35_07805 ribonuclease T K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D CJD35_03730 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_14325 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_13015 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJD35_00925 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJD35_05785 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJD35_13180 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJD35_02910 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJD35_13225 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJD35_08815 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJD35_00140 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJD35_07450 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJD35_09615 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJD35_04635 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJD35_03685 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJD35_03680 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJD35_14025 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJD35_08895 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJD35_09055 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJD35_00450 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CJD35_09805 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CJD35_01230 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CJD35_14560 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_14565 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_18420 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_21535 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_00210 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CJD35_14725 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJD35_05855 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CJD35_05860 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJD35_08960 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJD35_02370 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CJD35_09160 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D CJD35_02045 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D CJD35_02915 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CJD35_08165 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D CJD35_00280 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CJD35_02590 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D CJD35_12630 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJD35_12635 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJD35_02255 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D CJD35_06570 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CJD35_04270 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CJD35_09360 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CJD35_14120 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CJD35_00645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CJD35_09195 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CJD35_14595 rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D CJD35_14770 FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D CJD35_09250 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CJD35_02990 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CJD35_09280 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D CJD35_11835 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D CJD35_03975 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJD35_09645 redox protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D CJD35_06080 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D CJD35_08325 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D CJD35_01355 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CJD35_03030 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJD35_03025 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJD35_07005 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJD35_03785 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CJD35_01140 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CJD35_09445 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CJD35_00620 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CJD35_03755 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CJD35_13100 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CJD35_09240 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:shyd03012]
D CJD35_01250 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJD35_08810 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJD35_07440 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CJD35_01525 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CJD35_08540 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CJD35_08535 fusA; elongation factor G K02355 fusA; elongation factor G
D CJD35_04630 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CJD35_01515 ribosome-recycling factor K02838 frr; ribosome recycling factor
D CJD35_04625 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CJD35_12610 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CJD35_04040 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CJD35_14455 efp; elongation factor P K02356 efp; elongation factor P
D CJD35_02330 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CJD35_04250 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D CJD35_11830 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:shyd03110]
D CJD35_00255 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CJD35_04755 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CJD35_00700 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CJD35_13020 ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CJD35_18485 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_20710 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_16360 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_05425 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D CJD35_01950 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJD35_04340 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D CJD35_18765 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_01945 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJD35_03040 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D CJD35_02060 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D CJD35_18820 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D CJD35_18825 heat-shock protein K04080 ibpA; molecular chaperone IbpA
D CJD35_12770 heat-shock protein K04080 ibpA; molecular chaperone IbpA
D CJD35_10200 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D CJD35_18760 hypothetical protein K04078 groES; chaperonin GroES
D CJD35_01170 co-chaperone GroES K04078 groES; chaperonin GroES
D CJD35_19310 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_01785 protease K04771 degP; serine protease Do [EC:3.4.21.107]
D CJD35_09455 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJD35_12145 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJD35_08905 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CJD35_01955 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D CJD35_08880 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CJD35_04065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CJD35_01295 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CJD35_03275 peptidylprolyl isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D CJD35_09485 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D CJD35_13125 thioredoxin TrxA K03671 TXN; thioredoxin
D CJD35_07615 co-chaperone YbbN K05838 ybbN; putative thioredoxin
D CJD35_10010 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D CJD35_02105 grxD; glutaredoxin K07390 grxD; monothiol glutaredoxin
D CJD35_18575 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJD35_19730 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJD35_12750 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:shyd04131]
D CJD35_09505 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJD35_03630 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D CJD35_04375 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CJD35_06700 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CJD35_13240 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CJD35_13250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJD35_00955 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D CJD35_02025 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJD35_18485 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_20710 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_16360 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:shyd03051]
D CJD35_18485 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_20710 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_16360 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:shyd03032]
D CJD35_10305 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJD35_14525 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_17540 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_16045 integration host factor K03530 hupB; DNA-binding protein HU-beta
D CJD35_16150 integration host factor K03530 hupB; DNA-binding protein HU-beta
D CJD35_19820 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_03430 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CJD35_18875 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CJD35_12220 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CJD35_08875 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJD35_11950 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJD35_14880 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJD35_11505 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJD35_02650 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJD35_18970 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21950 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_19975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21085 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_12785 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJD35_11520 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_04160 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_09500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CJD35_05795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJD35_13175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJD35_05685 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_02635 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_14540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJD35_10265 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJD35_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CJD35_01195 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJD35_11345 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJD35_12360 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJD35_06000 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJD35_13830 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CJD35_13935 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CJD35_18055 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJD35_02455 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJD35_21170 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJD35_12910 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:shyd03036]
D CJD35_12925 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJD35_13240 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CJD35_16085 methylase K26273 SBNO; protein strawberry notch
D CJD35_19190 methylase K26273 SBNO; protein strawberry notch
D CJD35_20380 methylase K26273 SBNO; protein strawberry notch
D CJD35_14525 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_17540 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_16045 integration host factor K03530 hupB; DNA-binding protein HU-beta
D CJD35_16150 integration host factor K03530 hupB; DNA-binding protein HU-beta
D CJD35_19820 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_03430 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CJD35_18875 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CJD35_12220 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CJD35_18290 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D CJD35_21405 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM
D CJD35_08875 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJD35_07040 DNA-binding protein K11940 hspQ; heat shock protein HspQ
D CJD35_19030 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D CJD35_04370 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D CJD35_14095 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D CJD35_04850 chromosome segregation protein K03529 smc; chromosome segregation protein
D CJD35_10350 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D CJD35_10355 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D CJD35_10475 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJD35_04310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CJD35_10415 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJD35_05610 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CJD35_10470 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CJD35_10440 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CJD35_10480 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJD35_13265 cell division protein ZapA K09888 zapA; cell division protein ZapA
D CJD35_01615 cell division protein ZapE K06916 zapE; cell division protein ZapE
D CJD35_02345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJD35_17775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_00590 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_10150 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_18350 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_12570 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_21465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_12565 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CJD35_12560 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CJD35_12550 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CJD35_22265 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CJD35_05645 ATPase K03496 parA; chromosome partitioning protein
D CJD35_05870 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_19340 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_12040 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_16735 replication protein A K03496 parA; chromosome partitioning protein
D CJD35_20430 replication protein A K03496 parA; chromosome partitioning protein
D CJD35_21940 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_21100 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_09010 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_05160 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_05875 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_19170 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_16110 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_16740 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_21105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_11535 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20375 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20435 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_21685 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20130 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_13830 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CJD35_13935 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CJD35_05860 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJD35_05865 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJD35_14770 FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D CJD35_07785 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D CJD35_20405 integrase K03733 xerC; integrase/recombinase XerC
D CJD35_16100 integrase K03733 xerC; integrase/recombinase XerC
D CJD35_19225 integrase K03733 xerC; integrase/recombinase XerC
D CJD35_01445 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CJD35_20275 transposase K04763 xerD; integrase/recombinase XerD
D CJD35_20410 integrase K04763 xerD; integrase/recombinase XerD
D CJD35_16095 integrase K04763 xerD; integrase/recombinase XerD
D CJD35_19095 transposase K04763 xerD; integrase/recombinase XerD
D CJD35_19220 integrase K04763 xerD; integrase/recombinase XerD
D CJD35_19200 integrase K04763 xerD; integrase/recombinase XerD
D CJD35_20390 integrase K04763 xerD; integrase/recombinase XerD
D CJD35_01770 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJD35_20980 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CJD35_05250 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CJD35_02385 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:shyd03400]
D CJD35_00575 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CJD35_12710 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D CJD35_08105 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJD35_04830 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJD35_00545 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJD35_01420 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CJD35_08835 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CJD35_09765 bifunctional transcriptional activator/DNA repair protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D CJD35_10680 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D CJD35_03375 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJD35_12805 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJD35_02220 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D CJD35_08865 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D CJD35_09945 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_18045 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_05590 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_21160 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJD35_01195 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJD35_07470 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CJD35_18205 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_10800 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_12520 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_21320 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D CJD35_03570 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D CJD35_12165 excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D CJD35_12270 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJD35_01820 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJD35_01825 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJD35_06785 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJD35_08095 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJD35_14050 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJD35_05940 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CJD35_12575 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D CJD35_04795 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJD35_01375 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJD35_12785 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJD35_11520 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_04160 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJD35_09500 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D CJD35_05795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJD35_13175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJD35_05685 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_02635 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJD35_14540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJD35_18970 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21950 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_19975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21085 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_11345 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJD35_02855 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA
D CJD35_04905 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJD35_04915 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJD35_02000 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJD35_09780 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CJD35_10610 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CJD35_04100 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CJD35_14040 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJD35_12170 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D CJD35_09815 recombination protein RecR K06187 recR; recombination protein RecR
D CJD35_01205 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CJD35_13120 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CJD35_13115 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CJD35_01790 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CJD35_20210 DUF87 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D CJD35_17950 Ku protein K10979 ku; DNA end-binding protein Ku
D CJD35_17960 ligD; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CJD35_18040 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CJD35_21155 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D CJD35_12360 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJD35_06000 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJD35_18055 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJD35_02455 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJD35_21170 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJD35_12910 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJD35_14525 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_17540 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_16045 integration host factor K03530 hupB; DNA-binding protein HU-beta
D CJD35_16150 integration host factor K03530 hupB; DNA-binding protein HU-beta
D CJD35_19820 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D CJD35_03430 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D CJD35_18875 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CJD35_12220 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D CJD35_07250 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CJD35_05900 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CJD35_21625 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D CJD35_14315 transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D CJD35_14175 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D CJD35_08995 RecX family transcriptional regulator K03565 recX; regulatory protein
D CJD35_05990 DNA ligase-associated DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D CJD35_03530 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJD35_03540 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:shyd03029]
D CJD35_02980 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJD35_01250 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJD35_08810 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJD35_01525 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D CJD35_08540 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CJD35_08535 fusA; elongation factor G K02355 fusA; elongation factor G
D CJD35_05890 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D CJD35_12920 GTPase Era K03595 era; GTPase
D CJD35_14025 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJD35_05785 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJD35_02910 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJD35_14690 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJD35_14680 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJD35_14695 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJD35_13625 hypothetical protein K17680 PEO1; twinkle protein [EC:5.6.2.3]
D CJD35_18970 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21950 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_03875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_19975 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_21085 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CJD35_01490 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D CJD35_05425 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D CJD35_01950 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJD35_02060 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D CJD35_18765 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_18760 hypothetical protein K04078 groES; chaperonin GroES
D CJD35_01170 co-chaperone GroES K04078 groES; chaperonin GroES
D CJD35_01945 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJD35_14560 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_14565 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_18420 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_21535 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_02105 grxD; glutaredoxin K07390 grxD; monothiol glutaredoxin
D CJD35_10000 SAM-dependent methyltransferase K18162 NDUFAF5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-]
D CJD35_08480 SAM-dependent methyltransferase K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D CJD35_01770 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJD35_08285 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D CJD35_08290 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D CJD35_01670 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D CJD35_02380 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJD35_00780 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D CJD35_05725 SCO family protein K07152 SCO1; protein SCO1
D CJD35_18485 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_20710 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_16360 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:shyd02000]
D CJD35_03575 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D CJD35_02470 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CJD35_04460 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D CJD35_00985 elongation factor 3 K15738 uup; ABC transport system ATP-binding/permease protein
D CJD35_09075 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CJD35_00560 molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D CJD35_00565 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJD35_05955 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJD35_03345 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJD35_05965 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJD35_03330 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJD35_05960 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJD35_05950 ABC transporter K18480 linN; cholesterol transport system auxiliary component
D CJD35_03340 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D CJD35_09850 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CJD35_09845 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D CJD35_09840 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CJD35_09835 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJD35_06145 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CJD35_16500 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CJD35_07815 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CJD35_16505 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CJD35_16515 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CJD35_07745 iron ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CJD35_07750 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D CJD35_07755 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CJD35_22295 capsule biosynthesis protein K09688 kpsM; capsular polysaccharide transport system permease protein
D CJD35_22290 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D CJD35_22300 ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJD35_09965 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D CJD35_09970 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D CJD35_07360 lptB; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJD35_12775 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D CJD35_12780 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D CJD35_12735 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D CJD35_10575 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B
D CJD35_10580 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D CJD35_04310 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CJD35_13920 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CJD35_10940 sugar ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CJD35_03795 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D CJD35_12455 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CJD35_12460 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CJD35_10935 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CJD35_07495 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CJD35_03790 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CJD35_15160 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CJD35_11110 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CJD35_16720 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D CJD35_15165 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJD35_03335 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJD35_11115 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJD35_16725 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJD35_06060 sufC; ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CJD35_10740 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CJD35_17370 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CJD35_10950 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D CJD35_09620 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D CJD35_00065 MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D CJD35_07425 glucose/galactose MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CJD35_13200 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D CJD35_16345 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CJD35_04510 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CJD35_00040 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D CJD35_17115 MFS transporter K13021 ttuB; MFS transporter, ACS family, tartrate transporter
D CJD35_17565 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D CJD35_16625 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D CJD35_16845 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D CJD35_16400 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D CJD35_17000 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D CJD35_17725 MFS transporter K23677 SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter
D CJD35_12310 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D CJD35_06810 tetracycline resistance MFS efflux pump K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CJD35_04425 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CJD35_16405 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CJD35_14490 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CJD35_07700 emrB; MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D CJD35_09430 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D CJD35_09290 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D CJD35_09295 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D CJD35_05695 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D CJD35_00155 potassium transporter TrkA K10716 kch; voltage-gated potassium channel
D CJD35_08970 potassium channel protein K10716 kch; voltage-gated potassium channel
D CJD35_00745 ammonium transporter K03320 amt; ammonium transporter, Amt family
D CJD35_07300 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D CJD35_00270 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_01065 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_13230 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_09515 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_02130 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_03645 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_03525 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_15805 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_07050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_17600 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_17605 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_00410 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D CJD35_09120 large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D CJD35_03385 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CJD35_03205 flagellar motor protein K02556 motA; chemotaxis protein MotA
D CJD35_03265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CJD35_03270 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJD35_05135 hypothetical protein K02557 motB; chemotaxis protein MotB
D CJD35_02490 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D CJD35_02480 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D CJD35_02485 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D CJD35_04715 Tol-Pal system subunit TolQ K03562 tolQ; biopolymer transport protein TolQ
D CJD35_04720 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D CJD35_10095 magnesium transporter K03284 corA; magnesium transporter
D CJD35_08350 fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D CJD35_07155 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D CJD35_21740 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D CJD35_20550 mercury transporter MerT K08363 merT; mercuric ion transport protein
D CJD35_20575 hypothetical protein K08363 merT; mercuric ion transport protein
D CJD35_20545 heavy metal transporter K08364 merP; periplasmic mercuric ion binding protein
D CJD35_07575 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CJD35_00085 porin family protein K16079 omp31; outer membrane immunogenic protein
D CJD35_13930 porin family protein K16079 omp31; outer membrane immunogenic protein
D CJD35_04140 porin family protein K16079 omp31; outer membrane immunogenic protein
D CJD35_03405 opacity protein K16079 omp31; outer membrane immunogenic protein
D CJD35_00290 flagellar motor protein MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CJD35_05630 transporter K06076 fadL; long-chain fatty acid transport protein
D CJD35_01740 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D CJD35_07740 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D CJD35_09260 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17945 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_04260 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_08770 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17475 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17555 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_09670 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_01920 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_15045 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_15070 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_10890 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_15170 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_15325 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_07635 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_11920 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_20780 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_11265 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_15500 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_07940 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_15920 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17135 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_06245 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_14955 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_15050 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_06865 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_20470 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_07390 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_16275 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_07980 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_08045 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17085 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17090 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17585 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17710 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_17825 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_04775 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_04985 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_05755 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_18835 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJD35_05350 metal transporter K15725 czcC; outer membrane protein, heavy metal efflux system
D CJD35_16265 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CJD35_21710 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D CJD35_09600 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_06625 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_12080 type I secretion protein TolC K12340 tolC; outer membrane protein
D CJD35_17785 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_00580 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_11125 RND transporter K18904 nodT; outer membrane protein, multidrug efflux system
D CJD35_22140 capsule biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_13900 polysaccharide transporter K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_11700 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_06600 polysaccharide biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D CJD35_17560 carbohydrate porin K07267 oprB; porin
D CJD35_01490 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D CJD35_09655 pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB
D CJD35_01210 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D CJD35_00095 hypothetical protein K07278 tamA; translocation and assembly module TamA
D CJD35_02840 hypothetical protein K07278 tamA; translocation and assembly module TamA
D CJD35_00090 hypothetical protein K09800 tamB; translocation and assembly module TamB
D CJD35_02845 DUF490 domain-containing protein K09800 tamB; translocation and assembly module TamB
D CJD35_12125 exoprotein K09800 tamB; translocation and assembly module TamB
D CJD35_08155 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D CJD35_08160 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D CJD35_09490 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D CJD35_05790 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D CJD35_00660 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein
D CJD35_15095 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D CJD35_17165 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D CJD35_21755 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CJD35_21750 transporter K07238 TC.ZIP; zinc transporter, ZIP family
D CJD35_05360 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CJD35_16255 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D CJD35_17780 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_00585 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_10155 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CJD35_08335 rarD; protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D CJD35_18005 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D CJD35_02955 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJD35_17125 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJD35_11595 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJD35_17255 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJD35_18695 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D CJD35_15115 cation transporter K24160 NHA1; sodium/hydrogen antiporter
D CJD35_17265 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter
D CJD35_00895 sodium:proton exchanger K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D CJD35_12210 sodium:proton exchanger K03455 KEA1_2_3; K+:H+ antiporter
D CJD35_18870 sodium:proton exchanger K03455 KEA1_2_3; K+:H+ antiporter
D CJD35_10675 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter
D CJD35_17380 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D CJD35_17275 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D CJD35_05335 chromate transporter K07240 chrA; chromate transporter
D CJD35_19120 chromate transporter K07240 chrA; chromate transporter
D CJD35_20300 chromate transporter K07240 chrA; chromate transporter
D CJD35_12730 chromate transporter K07240 chrA; chromate transporter
D CJD35_14290 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D CJD35_19995 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D CJD35_21605 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein
D CJD35_05470 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D CJD35_06755 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D CJD35_18120 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D CJD35_21235 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D CJD35_18125 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D CJD35_21240 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D CJD35_18135 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D CJD35_21250 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D CJD35_18140 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D CJD35_21255 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D CJD35_18145 cation:proton antiporter K05564 phaG; multicomponent K+:H+ antiporter subunit G
D CJD35_21260 cation:proton antiporter K05564 phaG; multicomponent K+:H+ antiporter subunit G
D CJD35_08900 mviN; lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D CJD35_12765 trkD; potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D CJD35_03690 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D CJD35_09800 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CJD35_07530 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D CJD35_00980 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D CJD35_07565 MarC family protein K05595 marC; multiple antibiotic resistance protein
D CJD35_10440 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D CJD35_04375 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CJD35_06700 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D CJD35_01735 energy transducer TonB K03832 tonB; periplasmic protein TonB
D CJD35_02495 energy transducer TonB K03832 tonB; periplasmic protein TonB
D CJD35_03930 energy transducer TonB K03832 tonB; periplasmic protein TonB
D CJD35_09205 energy transducer TonB K03832 tonB; periplasmic protein TonB
D CJD35_04735 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D CJD35_04730 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D CJD35_07695 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D CJD35_04455 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D CJD35_05355 HlyD family secretion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CJD35_16260 HlyD family secretion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D CJD35_21715 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D CJD35_17775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_00590 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_10150 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_13895 protein tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D CJD35_06575 protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D CJD35_11710 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CJD35_11705 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator
D CJD35_03885 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CJD35_03880 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D CJD35_10160 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D CJD35_13035 entericidin, EcnA/B family K16348 ecnB; entericidin B
D CJD35_17955 MgtC/SapB family transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CJD35_21770 magnesium transporter MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D CJD35_17425 uraH; 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D CJD35_21590 copper resistance protein CopD K07245 pcoD; copper resistance protein D
D CJD35_16710 copper resistance protein CopD K07245 pcoD; copper resistance protein D
D CJD35_21585 copper resistance protein CopC K07156 copC; copper resistance protein C
D CJD35_16705 copper resistance protein CopC K07156 copC; copper resistance protein C
D CJD35_07610 MltA-interacting MipA K07274 mipA; MipA family protein
C 02044 Secretion system [BR:shyd02044]
D CJD35_09600 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_06625 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_12080 type I secretion protein TolC K12340 tolC; outer membrane protein
D CJD35_04460 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D CJD35_04455 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D CJD35_11720 general secretion pathway protein K02450 gspA; general secretion pathway protein A
D CJD35_14250 secretion system protein C K02452 gspC; general secretion pathway protein C
D CJD35_14245 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D CJD35_14240 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJD35_14235 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D CJD35_14230 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D CJD35_14225 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D CJD35_14220 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D CJD35_14215 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J
D CJD35_14210 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D CJD35_14205 general secretion pathway protein GspL K02461 gspL; general secretion pathway protein L
D CJD35_14200 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D CJD35_14195 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D CJD35_14190 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJD35_11060 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CJD35_11050 secretion system protein K02280 cpaC; pilus assembly protein CpaC
D CJD35_11045 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD
D CJD35_11040 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CJD35_09705 flagellar protein FlaI K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CJD35_11030 pilus assembly protein TadC K12511 tadC; tight adherence protein C
D CJD35_12665 hypothetical protein K27080 tadG; tight adherence protein G
D CJD35_01425 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D CJD35_01430 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D CJD35_07545 YggT family protein K02221 yggT; YggT family protein
D CJD35_21620 competence protein ComEA K02237 comEA; competence protein ComEA
D CJD35_14320 competence protein ComEC K02238 comEC; competence protein ComEC
D CJD35_03175 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJD35_03075 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJD35_03140 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CJD35_03130 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH
D CJD35_03125 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJD35_03100 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJD35_03095 flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CJD35_03090 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJD35_03085 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJD35_03080 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJD35_20895 hypothetical protein K03194 virB1; type IV secretion system protein VirB1
D CJD35_21850 hypothetical protein K03194 virB1; type IV secretion system protein VirB1
D CJD35_21855 hypothetical protein K03197 virB2; type IV secretion system protein VirB2
D CJD35_20885 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3
D CJD35_21860 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3
D CJD35_20880 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D CJD35_21865 transporter K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D CJD35_20875 type IV secretion system protein VirB5 K03200 virB5; type IV secretion system protein VirB5
D CJD35_21870 type IV secretion system protein VirB5 K03200 virB5; type IV secretion system protein VirB5
D CJD35_20865 type IV secretion system protein VirB6 K03201 virB6; type IV secretion system protein VirB6
D CJD35_21880 type IV secretion system protein VirB6 K03201 virB6; type IV secretion system protein VirB6
D CJD35_20855 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D CJD35_21885 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D CJD35_20850 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9
D CJD35_21890 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9
D CJD35_20845 hypothetical protein K03195 virB10; type IV secretion system protein VirB10
D CJD35_21895 type IV secretion system protein VirB10 K03195 virB10; type IV secretion system protein VirB10
D CJD35_20840 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJD35_21900 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D CJD35_21115 type IV secretion system protein VirD2 K18434 virD2; type IV secretion system T-DNA border endonuclease VirD2
D CJD35_05265 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CJD35_20835 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CJD35_21905 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CJD35_18645 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D CJD35_19795 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D CJD35_18635 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D CJD35_19785 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D CJD35_18625 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D CJD35_18620 trbC; type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D CJD35_19775 trbC; type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D CJD35_18615 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU
D CJD35_19770 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU
D CJD35_18605 traW; type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D CJD35_19760 traW; type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D CJD35_18600 type VI secretion protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D CJD35_19755 type VI secretion protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D CJD35_18585 traC; type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D CJD35_19740 traC; type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D CJD35_19735 conjugal transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D CJD35_18580 conjugal transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D CJD35_18570 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D CJD35_19725 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D CJD35_18565 conjugal transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D CJD35_19720 conjugal transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D CJD35_18560 conjugal transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D CJD35_18555 traL; type IV conjugative transfer system protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D CJD35_19710 traL; type IV conjugative transfer system protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D CJD35_19705 hypothetical protein K12069 traA; conjugal transfer pilus assembly protein TraA
D CJD35_18550 hypothetical protein K12069 traA; conjugal transfer pilus assembly protein TraA
D CJD35_18575 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJD35_19730 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJD35_18640 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D CJD35_19790 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D CJD35_05275 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D CJD35_05280 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D CJD35_20890 hypothetical protein K20528 trbC; type IV secretion system protein TrbC
D CJD35_05285 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD
D CJD35_05290 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D CJD35_05305 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D CJD35_05310 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D CJD35_05315 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D CJD35_05295 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D CJD35_05300 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D CJD35_13140 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_12075 RNA helicase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJD35_08905 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D CJD35_06680 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D CJD35_10705 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D CJD35_06685 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D CJD35_01285 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D CJD35_08650 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D CJD35_09220 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJD35_09190 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJD35_06675 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D CJD35_02380 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJD35_10360 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D CJD35_10365 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJD35_10370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:shyd02042]
D CJD35_07575 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:shyd02022]
D CJD35_09855 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CJD35_09825 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D CJD35_07820 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D CJD35_07825 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI
D CJD35_17770 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_01000 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_07680 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_08070 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_08240 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_07900 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_10105 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_10125 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJD35_10820 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CJD35_09340 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator
D CJD35_14115 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D CJD35_14110 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D CJD35_14105 two-component sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D CJD35_14100 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D CJD35_17140 sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D CJD35_17145 sigma-54-dependent Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D CJD35_09130 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJD35_09140 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJD35_18505 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_09145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_20730 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_02865 hybrid sensor histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D CJD35_18345 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CJD35_11885 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CJD35_21460 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D CJD35_02950 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D CJD35_18075 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_13995 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_21190 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D CJD35_18070 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_13990 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_21185 fixJ; DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_16540 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D CJD35_03150 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D CJD35_00785 sensor histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D CJD35_00790 DNA-binding response regulator K15012 regA; two-component system, response regulator RegA
D CJD35_06160 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D CJD35_09640 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D CJD35_01135 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D CJD35_01215 histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D CJD35_12305 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D CJD35_16995 nitrate transporter K22067 nasS; two-component system, oxyanion-binding sensor
D CJD35_16990 two-component system response regulator K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:shyd02035]
D CJD35_09130 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJD35_09135 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D CJD35_09150 protein-glutamate O-methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_18500 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_20725 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJD35_18505 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_09145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_20730 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJD35_09140 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJD35_03415 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_03500 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_07855 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_14005 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJD35_03130 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH
D CJD35_03125 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJD35_03095 flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D CJD35_03090 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJD35_03085 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJD35_03080 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJD35_03175 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJD35_03075 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJD35_03135 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJD35_03105 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJD35_03100 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJD35_03140 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CJD35_03245 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D CJD35_03195 flagellar protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJD35_03110 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CJD35_03145 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJD35_21735 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJD35_03115 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D CJD35_03210 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJD35_03215 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJD35_03220 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJD35_03230 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D CJD35_03235 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJD35_03250 flagellar biosynthesis protein FlgI K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJD35_03225 flagellar biosynthesis protein FlgG K02390 flgE; flagellar hook protein FlgE
D CJD35_03255 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CJD35_03260 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJD35_03155 flagellin FliC K02406 fliC; flagellin
D CJD35_03060 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2
D CJD35_03055 flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D CJD35_03170 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D CJD35_03205 flagellar motor protein K02556 motA; chemotaxis protein MotA
D CJD35_03265 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D CJD35_03270 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D CJD35_05135 hypothetical protein K02557 motB; chemotaxis protein MotB
D CJD35_03150 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D CJD35_03190 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CJD35_14190 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJD35_01425 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D CJD35_01430 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D CJD35_11060 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D CJD35_11050 secretion system protein K02280 cpaC; pilus assembly protein CpaC
D CJD35_11045 pilus assembly protein CpaD K02281 cpaD; pilus assembly protein CpaD
D CJD35_11040 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE
D CJD35_09705 flagellar protein FlaI K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:shyd04812]
D CJD35_18350 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_12570 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_21465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_10480 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJD35_10475 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJD35_22265 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D CJD35_05645 ATPase K03496 parA; chromosome partitioning protein
D CJD35_05870 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_19340 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_12040 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_16735 replication protein A K03496 parA; chromosome partitioning protein
D CJD35_20430 replication protein A K03496 parA; chromosome partitioning protein
D CJD35_21940 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_21100 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_09010 ParA family protein K03496 parA; chromosome partitioning protein
D CJD35_05160 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_05875 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_19170 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_16110 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_16740 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_21105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_11535 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20375 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20435 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_21685 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJD35_20130 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:shyd04147]
D CJD35_18485 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_20710 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_16360 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D CJD35_13240 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D CJD35_14815 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJD35_13250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJD35_13245 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJD35_02025 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJD35_08880 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CJD35_04065 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D CJD35_08965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CJD35_17320 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CJD35_18765 groL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_01165 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJD35_05425 hypothetical protein K04043 dnaK; molecular chaperone DnaK
D CJD35_01950 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D CJD35_12935 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJD35_13045 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CJD35_15945 gluconolaconase K01053 gnl; gluconolactonase [EC:3.1.1.17]
D CJD35_09460 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJD35_08540 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D CJD35_03630 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D CJD35_09055 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJD35_10740 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CJD35_17370 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D CJD35_00225 dicarboxylate--CoA ligase PimA K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_04920 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_06360 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CJD35_12995 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17630 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_17645 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06350 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06375 propanoyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_10860 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_06890 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_15555 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CJD35_13065 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D CJD35_13090 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D CJD35_08655 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJD35_02970 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJD35_07645 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJD35_08225 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJD35_07385 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D CJD35_02935 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJD35_17920 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CJD35_17190 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_13395 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJD35_00515 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJD35_07375 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D CJD35_10590 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D CJD35_07120 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_17110 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJD35_03825 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJD35_13410 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_01585 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_19875 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CJD35_11620 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D CJD35_00485 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D CJD35_01290 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJD35_00955 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:shyd02048]
D CJD35_05215 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CJD35_05240 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CJD35_11345 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJD35_10975 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D CJD35_01895 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CJD35_05110 AAA family ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CJD35_05105 calmodulin-binding protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CJD35_21805 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CJD35_19495 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CJD35_18880 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D CJD35_04075 PspC domain-containing protein K03973 pspC; phage shock protein C
D CJD35_04685 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D CJD35_04690 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D CJD35_13835 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D CJD35_13840 post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA
D CJD35_16780 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D CJD35_16775 addiction module antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D CJD35_04185 type II toxin-antitoxin system death-on-curing family toxin K07341 doc; death on curing protein
D CJD35_09240 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D CJD35_09235 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB
D CJD35_20040 PIN domain nuclease K07062 fitB; toxin FitB [EC:3.1.-.-]
D CJD35_19835 hypothetical protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D CJD35_10480 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJD35_18350 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_12570 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_21465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CJD35_13830 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CJD35_13935 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CJD35_03730 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_14325 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJD35_14045 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D CJD35_14560 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_14565 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_18420 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJD35_21535 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:shyd04090]
D CJD35_13045 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D CJD35_13065 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:shyd01504]
D CJD35_06810 tetracycline resistance MFS efflux pump K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D CJD35_02095 energy transducer TonB K02172 blaR1; bla regulator protein blaR1
D CJD35_02100 CopY family transcriptional repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D CJD35_14550 SGM family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_07475 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_08110 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D CJD35_07880 GNAT family N-acetyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D CJD35_17775 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_00590 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_10150 MexH family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D CJD35_17780 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_00585 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D CJD35_10155 AcrB/AcrD/AcrF family protein K18138 acrB; multidrug efflux pump
D CJD35_17785 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_00580 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D CJD35_07685 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D CJD35_09600 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_06625 hypothetical protein K12340 tolC; outer membrane protein
D CJD35_12080 type I secretion protein TolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:shyd00537]
D CJD35_08965 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:shyd03100]
D CJD35_04575 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_16870 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_16240 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_11305 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_12250 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_12255 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJD35_12650 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_12655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_09795 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_10025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_00555 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJD35_14085 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJD35_13285 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJD35_13280 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJD35_09590 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJD35_10765 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJD35_01835 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJD35_12090 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJD35_02830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJD35_00795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJD35_08205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJD35_06220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJD35_14515 tRNA-His K14226 tRNA-His; tRNA His
D CJD35_04580 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJD35_16865 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJD35_16245 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJD35_04960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_00480 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_12215 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_06735 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_00720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJD35_14620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJD35_12545 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJD35_11645 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_12390 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_04560 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_16225 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_16885 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJD35_04060 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJD35_13325 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJD35_06670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJD35_14170 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJD35_05910 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_07045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_08050 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_13150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJD35_11190 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJD35_03600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJD35_13465 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJD35_10710 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJD35_02200 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJD35_07325 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJD35_02960 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJD35_13040 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJD35_16250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_16860 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_04585 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJD35_04570 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_16875 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_16235 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJD35_04565 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_16230 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_16880 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CJD35_14545 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D CJD35_09160 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D CJD35_14275 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CJD35_06835 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D CJD35_15660 NAD(P)-dependent oxidoreductase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276]
D CJD35_01275 dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D CJD35_20620 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D CJD35_16290 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D CJD35_16630 PQQ-dependent dehydrogenase, methanol/ethanol family K17760 qheDH; quinohemoprotein ethanol dehydrogenase [EC:1.1.9.1]
D CJD35_17245 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D CJD35_17875 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D CJD35_02560 isoquinoline 1-oxidoreductase K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D CJD35_17870 isoquinoline 1-oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D CJD35_01760 aldehyde oxidase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D CJD35_15485 npdG; NADPH-dependent F420 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D CJD35_12855 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CJD35_12810 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D CJD35_07065 NAD/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D CJD35_05840 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CJD35_20600 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CJD35_00245 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D CJD35_06280 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CJD35_17650 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D CJD35_00220 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CJD35_08800 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CJD35_05815 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CJD35_03800 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CJD35_17700 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CJD35_01180 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CJD35_17610 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CJD35_17705 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D CJD35_18080 oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D CJD35_21195 oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D CJD35_09925 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJD35_04085 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJD35_11170 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJD35_10295 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D CJD35_09690 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D CJD35_11875 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CJD35_01730 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D CJD35_19475 Rieske (2Fe-2S) protein K24702 pdmA; N,N-dimethyl phenylurea N-demethylase alpha subunit [EC:1.14.15.38]
D CJD35_19480 phenylpropionate dioxygenase K24703 pdmB; N,N-dimethyl phenylurea N-demethylase beta subunit [EC:1.14.15.38]
D CJD35_20540 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D CJD35_07840 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CJD35_09015 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CJD35_05475 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CJD35_06760 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CJD35_21600 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D CJD35_05480 ArsR family transcriptional regulator K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CJD35_09595 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CJD35_04125 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CJD35_12715 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CJD35_00640 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D CJD35_08320 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D CJD35_08975 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CJD35_11805 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D CJD35_12000 glycosyl transferase family 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CJD35_08485 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CJD35_01720 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CJD35_05665 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CJD35_11990 selenoprotein O K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CJD35_04710 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CJD35_18680 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CJD35_08775 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CJD35_03585 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CJD35_15405 protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CJD35_02605 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CJD35_13185 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CJD35_20330 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CJD35_05170 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CJD35_05440 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CJD35_07400 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D CJD35_09155 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJD35_09820 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CJD35_10015 nitrilase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D CJD35_15205 LmbE-like protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D CJD35_07630 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CJD35_08015 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CJD35_13345 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CJD35_09680 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D CJD35_02705 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D CJD35_12835 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CJD35_00510 gamma carbonic anhydrase family protein K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-]
D CJD35_13950 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D CJD35_15520 alcohol dehydrogenase K13955 yogA; zinc-binding alcohol dehydrogenase/oxidoreductase
D CJD35_07735 sulfurtransferase FdhD K02379 fdhD; FdhD protein
D CJD35_14945 hypothetical protein K04755 fdx; ferredoxin, 2Fe-2S
D CJD35_02215 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D CJD35_19655 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D CJD35_15430 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D CJD35_15670 ferredoxin K05337 fer; ferredoxin
D CJD35_10195 ferredoxin family protein K05524 fdxA; ferredoxin
D CJD35_15835 hypothetical protein K02164 norE; nitric oxide reductase NorE protein
D CJD35_11615 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CJD35_03775 cysteine biosynthesis protein K06203 cysZ; CysZ protein
D CJD35_00520 VOC family protein K08234 yaeR; glyoxylase I family protein
D CJD35_05760 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CJD35_00075 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D CJD35_18710 ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D CJD35_08855 ubiB; ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D CJD35_03890 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D CJD35_14135 ubiquinone-binding protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D CJD35_17970 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CJD35_18375 cold-shock protein K03704 cspA; cold shock protein
D CJD35_11640 cold-shock protein K03704 cspA; cold shock protein
D CJD35_08170 cold-shock protein K03704 cspA; cold shock protein
D CJD35_21490 cold-shock protein K03704 cspA; cold shock protein
D CJD35_07305 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D CJD35_12870 DNA ligase-associated DEXH box helicase K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D CJD35_02535 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CJD35_00715 trigger factor K03545 tig; trigger factor
D CJD35_02875 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D CJD35_08500 AAA family ATPase K07391 comM; magnesium chelatase family protein
D CJD35_11670 peptidase K07395 K07395; putative proteasome-type protease
D CJD35_17440 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D CJD35_19505 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
D CJD35_02410 XshC-Cox1-family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CJD35_12120 hypothetical protein K03630 radC; DNA repair protein RadC
D CJD35_06975 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D CJD35_07770 hypothetical protein K07460 yraN; putative endonuclease
D CJD35_04910 endonuclease K07461 K07461; putative endonuclease
D CJD35_09345 endonuclease K07461 K07461; putative endonuclease
D CJD35_01395 endonuclease K07461 K07461; putative endonuclease
D CJD35_05770 excinuclease ABC subunit C K07461 K07461; putative endonuclease
D CJD35_01590 endonuclease K07461 K07461; putative endonuclease
D CJD35_07245 excinuclease ABC subunit C K07461 K07461; putative endonuclease
D CJD35_07465 excinuclease ABC subunit C K07461 K07461; putative endonuclease
D CJD35_10915 endonuclease K07461 K07461; putative endonuclease
D CJD35_13640 hypothetical protein K06909 xtmB; phage terminase large subunit
D CJD35_13455 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D CJD35_10085 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CJD35_09520 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CJD35_01900 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CJD35_11500 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CJD35_16115 hypothetical protein K06919 K06919; putative DNA primase/helicase
D CJD35_10785 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_16895 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_08690 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_08710 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_17485 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_05260 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_01385 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_10065 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family
D CJD35_20750 IS6 family transposase K18320 IS15; transposase, IS6 family
D CJD35_15125 IS110 family transposase K07486 K07486; transposase
D CJD35_15890 IS110 family transposase K07486 K07486; transposase
D CJD35_19485 IS256 family transposase K07493 K07493; putative transposase
D CJD35_02695 IS256 family transposase K07493 K07493; putative transposase
D CJD35_06960 IS256 family transposase K07493 K07493; putative transposase
D CJD35_16215 IS256 family transposase K07493 K07493; putative transposase
D CJD35_21325 IS256 family transposase K07493 K07493; putative transposase
D CJD35_21660 IS256 family transposase K07493 K07493; putative transposase
D CJD35_08695 IS256 family transposase K07493 K07493; putative transposase
D CJD35_18210 IS256 family transposase K07493 K07493; putative transposase
D CJD35_18865 IS256 family transposase K07493 K07493; putative transposase
D CJD35_19455 hypothetical protein K07497 K07497; putative transposase
D CJD35_19460 hypothetical protein K07497 K07497; putative transposase
D CJD35_19620 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CJD35_04695 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D CJD35_14535 nucleoid-associated protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CJD35_09210 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CJD35_04430 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CJD35_01940 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CJD35_08190 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CJD35_10245 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CJD35_02280 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D CJD35_09185 ispZ; septation protein IspZ K06190 ispZ; intracellular septation protein
D CJD35_11585 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D CJD35_06115 metalloendopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D CJD35_01175 universal stress protein K11932 uspG; universal stress protein G
D CJD35_02400 carbon starvation protein A K06200 cstA; carbon starvation protein
D CJD35_02305 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D CJD35_00650 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D CJD35_09070 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D CJD35_09065 beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase K07266 kpsC; capsular polysaccharide export protein
D CJD35_11940 glycoside hydrolase family 25 K07273 acm; lysozyme
D CJD35_12435 OmpW family protein K07275 ompW; outer membrane protein
D CJD35_12700 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D CJD35_05975 AsmA family protein K07290 yhjG; AsmA family protein
D CJD35_07860 NfeD family protein K07340 ybbJ; inner membrane protein
D CJD35_12465 hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D CJD35_11120 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CJD35_03945 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CJD35_12740 cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D CJD35_12755 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D CJD35_12760 cytochrome C biosynthesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D CJD35_09435 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D CJD35_09830 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CJD35_01410 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D CJD35_03160 hypothetical protein K03670 mdoG; periplasmic glucans biosynthesis protein
D CJD35_12195 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D CJD35_05505 pyridine nucleotide-disulfide oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D CJD35_22010 copper resistance protein B K07233 pcoB; copper resistance protein B
D CJD35_16680 copper resistance protein B K07233 pcoB; copper resistance protein B
D CJD35_16695 heavy metal resistance protein K24078 cnrR; nickel and cobalt resistance protein CnrR
D CJD35_21575 heavy metal resistance protein K24078 cnrR; nickel and cobalt resistance protein CnrR
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CJD35_10615 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D CJD35_18090 preprotein translocase subunit TatC K06886 glbN; hemoglobin
D CJD35_10235 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D CJD35_03485 globin K06886 glbN; hemoglobin
D CJD35_21205 preprotein translocase subunit TatC K06886 glbN; hemoglobin
D CJD35_09900 hypothetical protein K07001 K07001; NTE family protein
D CJD35_07100 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D CJD35_17455 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D CJD35_06045 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D CJD35_06065 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D CJD35_10715 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D CJD35_07180 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D CJD35_04660 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE
D CJD35_05745 rhodanese domain-containing protein K07146 K07146; UPF0176 protein
D CJD35_06480 hypothetical protein K11477 glcG; glc operon protein GlcG
D CJD35_05465 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D CJD35_09115 LemA family protein K03744 lemA; LemA protein
D CJD35_13055 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D CJD35_09105 hypothetical protein K08988 K08988; putative membrane protein
D CJD35_18470 hypothetical protein K08995 K08995; putative membrane protein
D CJD35_20690 hypothetical protein K08995 K08995; putative membrane protein
D CJD35_02735 hypothetical protein K08995 K08995; putative membrane protein
D CJD35_18690 PhnA protein K06193 phnA; protein PhnA
D CJD35_02390 PhnA protein K06193 phnA; protein PhnA
D CJD35_19980 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D CJD35_19040 hypothetical protein K06867 K06867; uncharacterized protein
D CJD35_17505 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D CJD35_05720 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D CJD35_17860 peaB; quinohemoprotein amine dehydrogenase maturase K06871 K06871; uncharacterized protein
D CJD35_09110 methanol dehydrogenase K06872 K06872; uncharacterized protein
D CJD35_11650 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D CJD35_00275 hypothetical protein K06890 K06890; uncharacterized protein
D CJD35_18660 hypothetical protein K06890 K06890; uncharacterized protein
D CJD35_07455 BAX inhibitor (BI)-1/YccA family protein K06890 K06890; uncharacterized protein
D CJD35_15825 hypothetical protein K06893 K06893; uncharacterized protein
D CJD35_00205 DUF815 domain-containing protein K06923 K06923; uncharacterized protein
D CJD35_01765 CoA-binding protein K06929 K06929; uncharacterized protein
D CJD35_09775 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D CJD35_19100 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D CJD35_20280 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D CJD35_05750 phosphoesterase K06953 K06953; uncharacterized protein
D CJD35_02170 VOC family protein K06996 K06996; uncharacterized protein
D CJD35_14570 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D CJD35_10640 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D CJD35_17685 4-hydroxyphenyl-beta-ketoacyl-CoA hydrolase K07045 K07045; uncharacterized protein
D CJD35_19320 hypothetical protein K07045 K07045; uncharacterized protein
D CJD35_16180 VapC toxin family PIN domain ribonuclease K07064 K07064; uncharacterized protein
D CJD35_06380 hypothetical protein K07068 K07068; uncharacterized protein
D CJD35_06905 DNA-binding protein K07068 K07068; uncharacterized protein
D CJD35_04350 DNA polymerase III subunit beta K07075 K07075; uncharacterized protein
D CJD35_08850 DNA polymerase beta K07075 K07075; uncharacterized protein
D CJD35_05255 DNA-binding protein K07076 K07076; uncharacterized protein
D CJD35_16185 nucleotidyltransferase K07076 K07076; uncharacterized protein
D CJD35_05495 hypothetical protein K07089 K07089; uncharacterized protein
D CJD35_00840 anion permease K07090 K07090; uncharacterized protein
D CJD35_13875 anion permease K07090 K07090; uncharacterized protein
D CJD35_10555 hypothetical protein K07090 K07090; uncharacterized protein
D CJD35_06655 anion permease K07090 K07090; uncharacterized protein
D CJD35_11325 anion permease K07090 K07090; uncharacterized protein
D CJD35_17295 anion permease K07090 K07090; uncharacterized protein
D CJD35_05455 permease K07090 K07090; uncharacterized protein
D CJD35_04390 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D CJD35_01565 phosphohydrolase K07098 K07098; uncharacterized protein
D CJD35_17465 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D CJD35_17305 hypothetical protein K07112 K07112; uncharacterized protein
D CJD35_17310 hypothetical protein K07112 K07112; uncharacterized protein
D CJD35_01185 NAD(P)-dependent oxidoreductase K07118 K07118; uncharacterized protein
D CJD35_22020 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D CJD35_20815 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D CJD35_02780 oxidoreductase K07124 K07124; uncharacterized protein
D CJD35_15755 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D CJD35_04420 hypothetical protein K07126 K07126; uncharacterized protein
D CJD35_12035 hypothetical protein K07126 K07126; uncharacterized protein
D CJD35_05515 AAA family ATPase K07133 K07133; uncharacterized protein
D CJD35_03450 GST-like protein K07136 K07136; uncharacterized protein
D CJD35_01910 hypothetical protein K07137 K07137; uncharacterized protein
D CJD35_07620 ATP-dependent protease K07157 K07157; uncharacterized protein
D CJD35_02375 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D CJD35_08990 hypothetical protein K09005 K09005; uncharacterized protein
D CJD35_14870 aspartyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D CJD35_18490 hypothetical protein K09131 K09131; uncharacterized protein
D CJD35_20715 hypothetical protein K09131 K09131; uncharacterized protein
D CJD35_07550 hypothetical protein K09131 K09131; uncharacterized protein
D CJD35_05730 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D CJD35_00885 hypothetical protein K09768 K09768; uncharacterized protein
D CJD35_10955 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D CJD35_01010 DUF454 domain-containing protein K09790 K09790; uncharacterized protein
D CJD35_07625 hypothetical protein K09791 K09791; uncharacterized protein
D CJD35_04945 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D CJD35_04855 BrnT family toxin K09803 K09803; uncharacterized protein
D CJD35_00990 DUF541 domain-containing protein K09807 K09807; uncharacterized protein
D CJD35_04055 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D CJD35_04415 N-acetyltransferase K09919 K09919; uncharacterized protein
D CJD35_11280 hypothetical protein K09922 K09922; uncharacterized protein
D CJD35_16035 cytoplasmic protein K09927 K09927; uncharacterized protein
D CJD35_02870 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D CJD35_17995 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D CJD35_01705 hypothetical protein K09939 K09939; uncharacterized protein
D CJD35_11075 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein
D CJD35_02020 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D CJD35_16985 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D CJD35_15155 DUF3299 domain-containing protein K09950 K09950; uncharacterized protein
D CJD35_02075 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein
D CJD35_06170 acetaldehyde dehydrogenase K09959 K09959; uncharacterized protein
D CJD35_12620 TraB/GumN family protein K09973 K09973; uncharacterized protein
D CJD35_12625 TraB/GumN family protein K09973 K09973; uncharacterized protein
D CJD35_12135 DUF1318 domain-containing protein K09978 K09978; uncharacterized protein
D CJD35_07460 hypothetical protein K09981 K09981; uncharacterized protein
D CJD35_06010 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein
D CJD35_07540 hypothetical protein K09983 K09983; uncharacterized protein
D CJD35_10255 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D CJD35_08435 hypothetical protein K09985 K09985; uncharacterized protein
D CJD35_00230 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D CJD35_14010 VWA domain-containing protein K09989 K09989; uncharacterized protein
D CJD35_09605 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein
D CJD35_17790 ThuA domain-containing protein K09992 K09992; uncharacterized protein
D CJD35_08195 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
D CJD35_01255 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024