+D GENES KO #

  KEGG Orthology (KO) - Scardovia inopinata

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:sij00010] D SCIP_0769 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2] D SCIP_1273 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SCIP_1360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D SCIP_0661 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D SCIP_0858 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SCIP_0660 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D SCIP_0402 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D SCIP_0508 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SCIP_0545 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0632 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0968 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0189 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D SCIP_0859 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D SCIP_0358 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D SCIP_0483 putative glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] C 00020 Citrate cycle (TCA cycle) [PATH:sij00020] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0924 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SCIP_0925 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] C 00030 Pentose phosphate pathway [PATH:sij00030] D SCIP_1273 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SCIP_0046 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D SCIP_0044 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D SCIP_0041 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D SCIP_0710 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D SCIP_0664 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D SCIP_0663 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D SCIP_1017 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D SCIP_0556 xylulose-5-phosphate/fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D SCIP_1073 sugar kinase K00852 rbsK; ribokinase [EC:2.7.1.15] D SCIP_0358 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D SCIP_0950 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D SCIP_1360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] C 00040 Pentose and glucuronate interconversions [PATH:sij00040] D SCIP_0699 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D SCIP_0710 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D SCIP_0847 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D SCIP_0857 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] C 00051 Fructose and mannose metabolism [PATH:sij00051] D SCIP_0826 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D SCIP_0871 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D SCIP_0406 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D SCIP_1274 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D SCIP_0857 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D SCIP_1360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D SCIP_0661 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:sij00052] D SCIP_0859 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D SCIP_1026 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D SCIP_1027 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D SCIP_0413 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SCIP_0699 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D SCIP_0358 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D SCIP_0769 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2] D SCIP_1113 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D SCIP_1054 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D SCIP_1187 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D SCIP_0263 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D SCIP_1167 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D SCIP_0052 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D SCIP_0373 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D SCIP_0430 putative sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D SCIP_0456 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D SCIP_0057 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D SCIP_1422 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:sij00500] D SCIP_0373 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D SCIP_0430 putative sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D SCIP_0456 putative alpha-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D SCIP_0062 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D SCIP_0699 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D SCIP_0316 putative beta-1,3-exoglucanase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58] D SCIP_0008 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0009 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1053 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0841 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1190 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1184 putative cellobiose phosphorylase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20] D SCIP_0619 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D SCIP_0529 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D SCIP_1403 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D SCIP_1279 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D SCIP_0232 amylopullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D SCIP_0441 putative amylase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D SCIP_0057 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D SCIP_1422 oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10] D SCIP_0186 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D SCIP_0146 putative amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D SCIP_0639 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D SCIP_0552 putative glycogen operon protein K01214 ISA; isoamylase [EC:3.2.1.68] D SCIP_0358 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D SCIP_0769 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2] D SCIP_1273 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SCIP_0826 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D SCIP_0871 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sij00520] D SCIP_1038 putative B-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D SCIP_0826 putative sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D SCIP_0871 sugar kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D SCIP_0472 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SCIP_0302 phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D SCIP_0949 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D SCIP_1142 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SCIP_0268 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SCIP_1188 putative alpha-L-arabinofuranosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D SCIP_1203 beta-1,4-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D SCIP_0769 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2] D SCIP_0483 putative glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D SCIP_0358 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D SCIP_0699 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D SCIP_1026 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D SCIP_1027 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D SCIP_0413 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SCIP_1167 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D SCIP_1273 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SCIP_0406 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D SCIP_1274 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D SCIP_0619 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:sij00620] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0732 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D SCIP_0189 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D SCIP_0554 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D SCIP_0555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D SCIP_0545 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SCIP_0274 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D SCIP_0632 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0968 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0119 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sij00630] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SCIP_0275 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D SCIP_0274 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D SCIP_0618 putative hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D SCIP_0975 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0491 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_1100 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D SCIP_0126 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] C 00640 Propanoate metabolism [PATH:sij00640] D SCIP_0554 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D SCIP_0555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0732 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D SCIP_0274 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D SCIP_0275 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D SCIP_0632 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0968 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0101 putative alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] C 00650 Butanoate metabolism [PATH:sij00650] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SCIP_0189 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D SCIP_0924 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SCIP_0925 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SCIP_0732 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D SCIP_0386 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D SCIP_0153 alcohol dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D SCIP_1329 3-oxoacyl-(acyl-carrier protein) reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism [PATH:sij00562] D SCIP_1015 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D SCIP_1300 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D SCIP_0661 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:sij00190] D SCIP_0924 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D SCIP_0925 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D SCIP_0167 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D SCIP_0169 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D SCIP_0168 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D SCIP_0166 ATP synthase delta subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D SCIP_0170 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D SCIP_0163 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D SCIP_0165 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D SCIP_0164 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D SCIP_0145 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D SCIP_1324 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:sij00680] D SCIP_0508 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SCIP_0119 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D SCIP_1360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D SCIP_0554 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D SCIP_0555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D SCIP_0402 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism [PATH:sij00910] D SCIP_0489 putative multicopper oxidase K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D SCIP_0387 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D SCIP_0975 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0491 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0138 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:sij00920] D SCIP_1405 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D SCIP_1406 cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:sij00061] D SCIP_0274 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D SCIP_0276 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D SCIP_0629 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0719 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0723 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:sij00071] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SCIP_0629 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0719 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0723 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0189 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:sij00561] D SCIP_0126 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D SCIP_0101 putative alcohol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D SCIP_0957 conserved hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D SCIP_0763 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SCIP_0359 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D SCIP_0052 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:sij00564] D SCIP_1140 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D SCIP_0763 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D SCIP_0359 putative kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D SCIP_1389 conserved hypothetical protein K01048 pldB; lysophospholipase [EC:3.1.1.5] D SCIP_0713 putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D SCIP_0670 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D SCIP_0777 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D SCIP_0709 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:sij00600] D SCIP_1055 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] D SCIP_1113 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D SCIP_0052 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D SCIP_0435 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:sij00230] D SCIP_0547 putative NTP pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D SCIP_1390 putative hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D SCIP_0358 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D SCIP_0950 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D SCIP_0907 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D SCIP_0909 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D SCIP_0904 phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D SCIP_0906 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D SCIP_0908 phosphoribosylaminoimidazole synthase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D SCIP_0914 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D SCIP_0915 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D SCIP_0905 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D SCIP_1012 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D SCIP_0680 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D SCIP_0678 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D SCIP_0237 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D SCIP_0944 ribonucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D SCIP_0419 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D SCIP_0721 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D SCIP_0454 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D SCIP_1125 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D SCIP_0581 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D SCIP_0558 GMP synthase/glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SCIP_0290 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D SCIP_0149 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D SCIP_0889 putative deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D SCIP_0751 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D SCIP_0511 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D SCIP_0781 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D SCIP_0325 conserved hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D SCIP_1359 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D SCIP_0212 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:sij00240] D SCIP_0737 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D SCIP_0738 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D SCIP_0646 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D SCIP_0647 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D SCIP_0648 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D SCIP_0651 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D SCIP_0650 putative dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D SCIP_1083 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D SCIP_0652 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D SCIP_0649 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D SCIP_0289 putative orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D SCIP_0715 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D SCIP_1281 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D SCIP_0599 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D SCIP_0944 ribonucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D SCIP_0050 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D SCIP_0149 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D SCIP_0031 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D SCIP_1292 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D SCIP_0752 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D SCIP_0393 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D SCIP_0410 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:sij00250] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_1261 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D SCIP_0962 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D SCIP_0961 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D SCIP_1359 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D SCIP_1012 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D SCIP_0646 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D SCIP_0647 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D SCIP_0387 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D SCIP_0975 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0491 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0737 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D SCIP_0738 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D SCIP_0472 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SCIP_0907 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:sij00260] D SCIP_1312 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SCIP_1310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SCIP_1283 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D SCIP_1282 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D SCIP_0953 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D SCIP_0990 putative aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D SCIP_0126 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D SCIP_0402 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_1100 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D SCIP_0049 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D SCIP_1172 tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D SCIP_1171 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:sij00270] D SCIP_1405 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D SCIP_1406 cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D SCIP_0585 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D SCIP_0228 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D SCIP_0242 putative nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D SCIP_0237 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D SCIP_1312 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SCIP_1310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SCIP_1283 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D SCIP_0989 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SCIP_0305 putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_0632 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0968 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0049 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] C 00280 Valine, leucine and isoleucine degradation [PATH:sij00280] D SCIP_0989 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0275 propionyl-CoA carboxylase beta subunit K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D SCIP_0274 propionyl-CoA carboxylase alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SCIP_0386 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sij00290] D SCIP_0989 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D SCIP_1261 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] C 00300 Lysine biosynthesis [PATH:sij00300] D SCIP_1283 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D SCIP_1312 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SCIP_1310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SCIP_0836 truncated dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SCIP_0835 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D SCIP_0840 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D SCIP_0839 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D SCIP_0838 tetrahydrodipicolinate N-succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] D SCIP_0834 aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D SCIP_0837 conserved hypothetical protein K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D SCIP_0878 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:sij00310] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:sij00220] D SCIP_1085 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D SCIP_0962 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D SCIP_0961 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D SCIP_1086 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D SCIP_0975 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0491 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0737 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D SCIP_0738 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D SCIP_0387 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_1261 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] C 00330 Arginine and proline metabolism [PATH:sij00330] D SCIP_0478 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism D SCIP_0256 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00350 Tyrosine metabolism [PATH:sij00350] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_0256 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D SCIP_0189 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00360 Phenylalanine metabolism [PATH:sij00360] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_0256 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:sij00380] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sij00400] D SCIP_0241 phospho-2-dehydro-3-heoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D SCIP_0597 shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D SCIP_0598 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D SCIP_0553 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D SCIP_0596 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D SCIP_1168 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D SCIP_1170 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D SCIP_1169 putative indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D SCIP_1172 tryptophan synthase alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D SCIP_1171 tryptophan synthase beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D SCIP_1270 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D SCIP_0811 putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_0256 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:sij00430] D SCIP_0555 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D SCIP_0554 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:sij00450] D SCIP_0585 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D SCIP_0615 aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D SCIP_1438 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D SCIP_1411 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:sij00460] D SCIP_0008 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0009 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1053 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0841 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1190 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00470 D-Amino acid metabolism [PATH:sij00470] D SCIP_0890 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D SCIP_1139 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SCIP_1033 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D SCIP_0876 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SCIP_0840 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D SCIP_0839 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:sij00480] D SCIP_0305 putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D SCIP_0301 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D SCIP_1212 putative glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D SCIP_0041 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D SCIP_0046 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:sij00515] D SCIP_1417 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:sij00514] D SCIP_1417 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:sij00511] D SCIP_1113 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D SCIP_1191 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D SCIP_1055 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:sij00542] D SCIP_0452 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sij00541] D SCIP_0699 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D SCIP_0413 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D SCIP_1167 putative UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D SCIP_1166 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D SCIP_0406 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D SCIP_1274 conserved hypothetical protein K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D SCIP_0949 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:sij00550] D SCIP_1142 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SCIP_0268 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SCIP_0873 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D SCIP_0876 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SCIP_1139 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SCIP_0878 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D SCIP_1063 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D SCIP_0877 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SCIP_0874 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D SCIP_0880 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SCIP_1395 putative penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D SCIP_0583 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D SCIP_0121 conserved hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D SCIP_0122 cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:sij00552] D SCIP_0452 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:sij00543] D SCIP_0452 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SCIP_0378 putative glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D SCIP_1405 putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:sij00730] D SCIP_1235 putative phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D SCIP_1234 conserved hypothetical protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D SCIP_1236 thiamine biosynthesis protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D SCIP_0845 putative thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D SCIP_0212 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D SCIP_1237 transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:sij00740] D SCIP_0282 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D SCIP_1234 conserved hypothetical protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D SCIP_0547 putative NTP pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D SCIP_1390 putative hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:sij00750] D SCIP_0919 putative pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D SCIP_0236 putative oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D SCIP_0953 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:sij00760] D SCIP_1127 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D SCIP_0951 nicotinic acid mononucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D SCIP_0734 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D SCIP_0776 putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D SCIP_0745 putative amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D SCIP_1356 putative transcriptional regulator K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D SCIP_0955 kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:sij00770] D SCIP_0477 conserved hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D SCIP_1129 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D SCIP_0542 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D SCIP_0277 putative 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D SCIP_0989 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:sij00780] D SCIP_0273 conserved hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:sij00785] D SCIP_1097 putative lipoate protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_1100 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:sij00790] D SCIP_0421 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D SCIP_0423 conserved hypothetical protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D SCIP_0422 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D SCIP_0411 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D SCIP_0869 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] C 00670 One carbon pool by folate [PATH:sij00670] D SCIP_0411 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D SCIP_1288 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D SCIP_0539 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D SCIP_0680 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D SCIP_0230 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SCIP_0410 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D SCIP_0251 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:sij00860] D SCIP_1145 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCIP_1233 putative ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sij00130] D SCIP_0401 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D SCIP_0043 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:sij00900] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SCIP_0386 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D SCIP_0385 hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D SCIP_1430 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D SCIP_1429 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D SCIP_0761 isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D SCIP_1063 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D SCIP_0664 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D SCIP_1166 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D SCIP_1166 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:sij00946] D SCIP_0008 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0009 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1053 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0841 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1190 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:sij00261] D SCIP_1312 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D SCIP_1310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D SCIP_0836 truncated dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D SCIP_0835 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:sij00521] D SCIP_0769 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2] D SCIP_0358 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D SCIP_1300 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D SCIP_1015 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D SCIP_1166 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D SCIP_0769 putative transcriptional regulator K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis D SCIP_1166 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:sij00401] D SCIP_0811 putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_0256 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:sij00999] D SCIP_0228 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D SCIP_0008 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0009 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1053 putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_0841 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D SCIP_1190 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:sij00362] D SCIP_0574 conserved hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:sij00625] D SCIP_0189 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:sij00626] D SCIP_0189 aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:sij03020] D SCIP_0224 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SCIP_0225 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SCIP_0219 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D SCIP_0227 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:sij03010] D SCIP_0540 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D SCIP_0717 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D SCIP_0197 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D SCIP_0584 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D SCIP_0208 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D SCIP_1164 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D SCIP_0176 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D SCIP_0205 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D SCIP_0188 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D SCIP_0190 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D SCIP_0218 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D SCIP_0175 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D SCIP_0217 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D SCIP_0204 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D SCIP_0356 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D SCIP_1094 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D SCIP_0200 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D SCIP_1162 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D SCIP_0195 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D SCIP_0633 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D SCIP_1116 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D SCIP_0194 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D SCIP_0191 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D SCIP_0192 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D SCIP_0203 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D SCIP_0206 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D SCIP_0245 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D SCIP_1161 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D SCIP_0244 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D SCIP_1117 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D SCIP_0187 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D SCIP_0201 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D SCIP_0210 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D SCIP_0198 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D SCIP_0220 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D SCIP_0207 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D SCIP_0350 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D SCIP_0827 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D SCIP_1123 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D SCIP_0196 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D SCIP_0193 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D SCIP_0202 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D SCIP_0630 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D SCIP_1122 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D SCIP_1135 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D SCIP_0199 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D SCIP_0209 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D SCIP_0438 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D SCIP_1132 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D SCIP_0257 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D SCIP_1445 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D SCIP_0828 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D SCIP_0216 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D SCIP_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SCIP_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SCIP_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SCIP_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SCIP_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:sij00970] D SCIP_tRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SCIP_tRNA31 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SCIP_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SCIP_tRNA33 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA30 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA28 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D SCIP_tRNA15 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D SCIP_tRNA24 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D SCIP_tRNA32 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SCIP_tRNA38 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SCIP_tRNA16 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SCIP_tRNA39 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SCIP_tRNA11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SCIP_tRNA23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SCIP_tRNA44 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SCIP_tRNA29 tRNA-His K14226 tRNA-His; tRNA His D SCIP_tRNA03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D SCIP_tRNA45 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA20 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA37 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA43 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SCIP_tRNA40 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SCIP_tRNA42 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SCIP_tRNA04 tRNA-Met K14230 tRNA-Met; tRNA Met D SCIP_tRNA08 tRNA-Met K14230 tRNA-Met; tRNA Met D SCIP_tRNA17 tRNA-Met K14230 tRNA-Met; tRNA Met D SCIP_tRNA14 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D SCIP_tRNA13 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SCIP_tRNA27 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SCIP_tRNA21 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SCIP_tRNA05 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA09 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA41 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA12 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SCIP_tRNA36 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SCIP_tRNA01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SCIP_tRNA35 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D SCIP_tRNA06 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D SCIP_tRNA26 tRNA-Val K14237 tRNA-Val; tRNA Val D SCIP_tRNA34 tRNA-Val K14237 tRNA-Val; tRNA Val D SCIP_tRNA25 tRNA-Val K14237 tRNA-Val; tRNA Val D SCIP_1145 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCIP_0345 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D SCIP_0346 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D SCIP_0344 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D SCIP_0591 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SCIP_0748 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SCIP_0307 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SCIP_0669 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SCIP_0360 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SCIP_1090 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SCIP_1411 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SCIP_0230 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D SCIP_1269 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SCIP_0939 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCIP_1036 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SCIP_0400 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SCIP_0331 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SCIP_0459 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SCIP_0749 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SCIP_0966 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SCIP_0965 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SCIP_0959 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCIP_0038 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:sij03060] D SCIP_0211 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D SCIP_1119 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D SCIP_0662 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D SCIP_0677 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D SCIP_1443 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D SCIP_0770 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SCIP_1091 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D SCIP_0034 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D SCIP_0351 putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D SCIP_0313 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system C 03050 Proteasome C 03018 RNA degradation [PATH:sij03018] D SCIP_1124 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D SCIP_0508 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SCIP_0357 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D SCIP_1271 transcription termination factor Rho K03628 rho; transcription termination factor Rho D SCIP_0300 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D SCIP_1348 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D SCIP_1001 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SCIP_1324 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D SCIP_1434 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:sij03030] D SCIP_0278 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0862 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0315 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SCIP_1314 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SCIP_1291 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SCIP_0935 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SCIP_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SCIP_0120 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D SCIP_0888 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D SCIP_1163 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D SCIP_0460 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D SCIP_1016 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D SCIP_0352 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D SCIP_0487 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:sij03410] D SCIP_1267 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D SCIP_1003 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D SCIP_1021 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D SCIP_0012 conserved hypothetical protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D SCIP_0382 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D SCIP_1243 DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D SCIP_0154 putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D SCIP_0487 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:sij03420] D SCIP_0507 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D SCIP_0656 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D SCIP_0560 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D SCIP_0543 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D SCIP_0657 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D SCIP_0297 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_1070 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_0582 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_0487 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:sij03430] D SCIP_0297 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_1070 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_0582 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_0980 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D SCIP_0981 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D SCIP_1163 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D SCIP_0460 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D SCIP_0315 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SCIP_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SCIP_1314 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SCIP_0935 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SCIP_1291 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SCIP_0278 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0862 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0487 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SCIP_1296 putative DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:sij03440] D SCIP_1163 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D SCIP_0460 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D SCIP_0003 recombination protein RecF K03629 recF; DNA replication and repair protein RecF D SCIP_1064 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D SCIP_1313 recombination protein RecR K06187 recR; recombination protein RecR D SCIP_0773 recombinase RecA K03553 recA; recombination protein RecA D SCIP_0675 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D SCIP_0676 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D SCIP_0674 holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D SCIP_1134 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D SCIP_0315 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SCIP_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SCIP_1314 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SCIP_0935 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SCIP_1291 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SCIP_0278 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0862 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0229 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:sij03250] D SCIP_0455 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:sij02010] D SCIP_0233 putative nitrate/sulfonate/bicarbonate ABC transporter permease component K05845 opuC; osmoprotectant transport system substrate-binding protein D SCIP_0234 putative glycine betaine/L-proline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D SCIP_0022 ABC transporter ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D SCIP_0442 putative ABC transporter substrate binding component K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D SCIP_0443 putative ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D SCIP_0444 putative ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D SCIP_0054 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_0369 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_1201 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_1207 putative sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_0055 sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_0370 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_1200 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_1206 putative sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_0056 sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_0371 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_1199 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_1204 putative truncated sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_0426 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D SCIP_1193 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D SCIP_1423 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D SCIP_1195 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D SCIP_1421 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D SCIP_1194 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D SCIP_1420 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D SCIP_0852 putative sugar ABC transporter substrate binding component K10546 chvE; putative multiple sugar transport system substrate-binding protein D SCIP_0850 putative sugar ABC transporter permease component K10547 gguB; putative multiple sugar transport system permease protein D SCIP_0851 putative sugar ABC transporter ATP-binding component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D SCIP_1075 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein D SCIP_1076 ribose ABC transporter permease component K10440 rbsC; ribose transport system permease protein D SCIP_1077 ribose ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D SCIP_1074 conserved hypothetical protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D SCIP_1111 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D SCIP_1110 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D SCIP_1109 phosphate ABC transporter permease component K02038 pstA; phosphate transport system permease protein D SCIP_1108 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D SCIP_0940 putative ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D SCIP_0832 glutamate ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D SCIP_0831 glutamate ABC transporter permease component K10006 gluC; glutamate transport system permease protein D SCIP_0830 glutamate ABC transporter permease component K10007 gluD; glutamate transport system permease protein D SCIP_0833 glutamate ABC transporter ATP-binding component K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D SCIP_0284 putative metal ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D SCIP_0286 putative metal ABC transporter permease component K02072 metI; D-methionine transport system permease protein D SCIP_0285 putative metal ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D SCIP_0804 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0809 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0808 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D SCIP_0807 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D SCIP_0806 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D SCIP_0822 dipeptide/oligopeptide ABC transporter substrate binding component K13889 gsiB; glutathione transport system substrate-binding protein D SCIP_0817 dipeptide/oligopeptide ABC transporter permease component K13890 gsiC; glutathione transport system permease protein D SCIP_0818 dipeptide/oligopeptide ABC transporter permease component K13891 gsiD; glutathione transport system permease protein D SCIP_0819 dipeptide/oligopeptide ABC transporter ATP-binding component K13892 gsiA; glutathione transport system ATP-binding protein D SCIP_1229 putative truncated ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D SCIP_0742 putative ABC transporter permease component K11051 cylB; multidrug/hemolysin transport system permease protein D SCIP_0741 putative ABC transporter ATP-binding component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D SCIP_0465 cell division protein K09811 ftsX; cell division transport system permease protein D SCIP_0464 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D SCIP_1174 ABC transporter ATP-binding and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_1173 ABC transporter ATP-binding and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0640 putative ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0128 ABC transporter ATP-binding component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0127 ABC transporter ATP-binding component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0641 putative ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0342 putative ABC transporter ATP-binding component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:sij03070] D SCIP_1119 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D SCIP_0662 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D SCIP_0211 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D SCIP_0677 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D SCIP_1443 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D SCIP_0770 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SCIP_0034 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D SCIP_1091 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:sij02020] D SCIP_0404 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D SCIP_1111 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D SCIP_1302 putative protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D SCIP_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SCIP_0293 hypothetical protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D SCIP_1320 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D SCIP_1319 conserved hypothetical protein K12510 tadB; tight adherence protein B D SCIP_0975 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0491 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SCIP_1030 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SCIP_0412 phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:sij02024] D SCIP_0241 phospho-2-dehydro-3-heoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D SCIP_0629 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0719 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0723 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_1030 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SCIP_0804 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0809 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0808 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D SCIP_0807 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D SCIP_0806 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D SCIP_0335 putative transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor D SCIP_0895 peptides ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_1268 putative ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_0820 dipeptide/oligopeptide ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_0821 putative peptide ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_0894 peptides ABC transporter substrate binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein D SCIP_0893 peptides ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D SCIP_0892 peptides ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein D SCIP_1443 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D SCIP_1119 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D SCIP_0662 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D SCIP_0211 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D SCIP_0677 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D SCIP_0770 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SCIP_0034 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D SCIP_1091 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D SCIP_1075 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D SCIP_0759 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D SCIP_0508 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:sij01501] D SCIP_1038 putative B-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D SCIP_0804 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0809 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0808 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D SCIP_0807 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D SCIP_0806 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D SCIP_0880 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:sij01502] D SCIP_1139 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SCIP_0890 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D SCIP_0878 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D SCIP_0877 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SCIP_0874 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance D SCIP_0455 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:sij01000] C 01001 Protein kinases [BR:sij01001] D SCIP_1396 putative serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D SCIP_1397 putative serine-threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D SCIP_0762 putative serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D SCIP_1366 kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D SCIP_0404 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D SCIP_0997 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D SCIP_0515 two-component sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:sij01009] D SCIP_1393 putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:sij01002] D SCIP_0313 putative lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D SCIP_0595 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D SCIP_0317 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D SCIP_0240 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D SCIP_0578 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D SCIP_0238 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D SCIP_0558 GMP synthase/glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D SCIP_0283 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D SCIP_0466 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D SCIP_0407 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D SCIP_0907 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D SCIP_0472 D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D SCIP_0159 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D SCIP_1289 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-] D SCIP_0025 conserved hypothetical protein K07052 K07052; CAAX protease family protein D SCIP_0301 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D SCIP_0461 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D SCIP_0502 peptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D SCIP_0837 conserved hypothetical protein K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47] D SCIP_0462 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D SCIP_0870 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D SCIP_0420 zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SCIP_1362 putative protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D SCIP_1302 putative protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D SCIP_0787 putative protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96] D SCIP_1098 protease K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D SCIP_0583 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D SCIP_0726 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D SCIP_0727 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D SCIP_1068 conserved hypothetical protein K07177 K07177; Lon-like protease D SCIP_0887 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D SCIP_0526 putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D SCIP_0351 putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D SCIP_0480 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:sij01003] D SCIP_1029 putative glycosyl transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D SCIP_1417 glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D SCIP_0672 glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D SCIP_0503 putative glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D SCIP_0639 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D SCIP_0452 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D SCIP_0058 putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D SCIP_0116 conserved hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D SCIP_0378 putative glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:sij01005] D SCIP_0452 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sij01011] D SCIP_1142 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D SCIP_0268 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D SCIP_0873 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D SCIP_0876 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D SCIP_1139 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D SCIP_0890 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D SCIP_1033 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D SCIP_0877 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D SCIP_0874 N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D SCIP_1437 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D SCIP_0880 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SCIP_1395 putative penicillin binding protein transpeptidase K05364 pbpA; penicillin-binding protein A D SCIP_0583 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D SCIP_0283 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D SCIP_0466 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D SCIP_0407 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D SCIP_0159 conserved hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D SCIP_0593 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:sij01004] D SCIP_0276 fatty acid synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D SCIP_0435 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D SCIP_0629 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0719 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0723 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0763 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:sij01006] D SCIP_0761 isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D SCIP_1063 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D SCIP_0779 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SCIP_0401 putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:sij01007] D SCIP_1145 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCIP_0959 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCIP_0038 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SCIP_1090 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SCIP_0331 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SCIP_1411 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SCIP_1036 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SCIP_1269 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SCIP_0939 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCIP_0400 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SCIP_0748 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SCIP_0749 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SCIP_0307 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SCIP_0360 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SCIP_0459 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SCIP_0669 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SCIP_0591 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SCIP_0966 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SCIP_0965 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SCIP_1120 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D SCIP_1261 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D SCIP_0834 aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D SCIP_0256 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D SCIP_0585 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D SCIP_0989 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:sij00194] D SCIP_0170 ATP synthase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D SCIP_0169 ATP synthase beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D SCIP_0168 ATP synthase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D SCIP_0167 ATP synthase alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D SCIP_0166 ATP synthase delta subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D SCIP_0165 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D SCIP_0164 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D SCIP_0163 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:sij03000] D SCIP_1078 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SCIP_1208 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SCIP_0429 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SCIP_0431 putative transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D SCIP_0374 transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D SCIP_0100 putative transcription regulator K03710 K03710; GntR family transcriptional regulator D SCIP_1156 putative transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D SCIP_1345 putative transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D SCIP_1030 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D SCIP_0273 conserved hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D SCIP_0335 putative transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor D SCIP_0124 conserved hypothetical protein K02647 cdaR; carbohydrate diacid regulator D SCIP_0982 putative transcriptional regulator K07727 K07727; putative transcriptional regulator D SCIP_0516 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D SCIP_1439 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SCIP_0530 putative transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D SCIP_0963 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D SCIP_0665 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D SCIP_1237 transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D SCIP_0885 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D SCIP_0883 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:sij03021] D SCIP_0219 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D SCIP_0224 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SCIP_0225 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SCIP_0227 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D SCIP_0759 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D SCIP_0606 conserved hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D SCIP_0179 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D SCIP_0288 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D SCIP_1118 putative transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D SCIP_0513 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D SCIP_1271 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:sij03019] D SCIP_1124 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D SCIP_1084 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SCIP_0300 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D SCIP_0457 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D SCIP_0508 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SCIP_0357 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D SCIP_1271 transcription termination factor Rho K03628 rho; transcription termination factor Rho D SCIP_1348 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D SCIP_1001 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SCIP_1324 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D SCIP_1434 putative RNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D SCIP_0658 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ D SCIP_0702 putative helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D SCIP_0974 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:sij03011] D SCIP_0540 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D SCIP_0717 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D SCIP_0197 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D SCIP_0584 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D SCIP_0208 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D SCIP_1164 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D SCIP_0176 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D SCIP_0205 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D SCIP_0188 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D SCIP_0190 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D SCIP_0218 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D SCIP_0175 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D SCIP_0217 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D SCIP_0204 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D SCIP_0356 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D SCIP_1094 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D SCIP_0200 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D SCIP_1162 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D SCIP_0195 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D SCIP_0633 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D SCIP_1116 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D SCIP_0194 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D SCIP_0191 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D SCIP_0192 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D SCIP_0203 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D SCIP_0206 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D SCIP_1161 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D SCIP_0244 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D SCIP_1117 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D SCIP_0245 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D SCIP_0187 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D SCIP_0201 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D SCIP_0210 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D SCIP_0198 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D SCIP_0220 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D SCIP_0207 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D SCIP_0350 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D SCIP_0827 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D SCIP_1123 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D SCIP_0196 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D SCIP_0193 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D SCIP_0202 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D SCIP_1122 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D SCIP_1135 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D SCIP_0199 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D SCIP_0209 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D SCIP_0438 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D SCIP_1132 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D SCIP_0257 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D SCIP_1445 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D SCIP_0828 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D SCIP_0216 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D SCIP_0630 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D SCIP_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SCIP_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SCIP_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SCIP_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SCIP_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:sij03009] D SCIP_1084 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SCIP_0457 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D SCIP_0627 GTP-binding protein K03595 era; GTPase D SCIP_1121 GTPase K03979 obgE; GTPase [EC:3.6.5.-] D SCIP_0179 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D SCIP_0288 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D SCIP_1118 putative transcription antiterminator K02601 nusG; transcription termination/antitermination protein NusG D SCIP_1432 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SCIP_0231 putative methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D SCIP_0973 conserved hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D SCIP_1133 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SCIP_0622 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D SCIP_1441 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SCIP_0882 S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SCIP_1414 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D SCIP_0956 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D SCIP_0024 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D SCIP_0712 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D SCIP_0474 putative ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D SCIP_0683 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SCIP_0314 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SCIP_0932 putative ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D SCIP_0505 acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D SCIP_1096 putative 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM D SCIP_1124 ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D SCIP_0592 putative endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D SCIP_0684 GTP-binding protein K03977 engA; GTPase D SCIP_0969 GTP-binding protein K03665 hflX; GTPase D SCIP_0451 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SCIP_0751 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D SCIP_0181 ribosome-binding factor K02834 rbfA; ribosome-binding factor A D SCIP_0948 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D SCIP_0625 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D SCIP_0399 conserved hypothetical protein K07574 yhbY; RNA-binding protein D SCIP_0500 GTPase K06942 ychF; ribosome-binding ATPase D SCIP_1131 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:sij03016] D SCIP_1145 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCIP_0459 prolyl-tRNA synthase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SCIP_1036 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SCIP_0939 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCIP_1411 methionyl-tRNA synthase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SCIP_0331 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SCIP_0400 lysyl-tRNA synthase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SCIP_0748 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SCIP_0591 alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SCIP_0307 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SCIP_0669 threonyl-tRNA synthase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SCIP_0360 seryl-tRNA synthase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SCIP_1090 cysteinyl-tRNA synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SCIP_1269 valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SCIP_0749 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SCIP_0966 phenylalanyl-tRNA synthase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SCIP_0965 phenylalanyl-tRNA synthase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SCIP_0959 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCIP_0038 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SCIP_0118 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D SCIP_0623 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D SCIP_0642 putative methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D SCIP_0414 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D SCIP_0223 tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D SCIP_0182 tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D SCIP_0451 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SCIP_0779 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SCIP_1444 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D SCIP_1126 putative ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D SCIP_0730 putative exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D SCIP_0051 putative cytidine/deoxycytidine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D SCIP_1342 cytidine and deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D SCIP_0780 conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D SCIP_1095 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D SCIP_1022 putative RNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D SCIP_0967 putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family D SCIP_0474 putative ribosomal pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D SCIP_1385 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D SCIP_0418 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D SCIP_0933 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D SCIP_0931 metalloendopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D SCIP_0934 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D SCIP_0357 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:sij03012] D SCIP_0180 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D SCIP_0829 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D SCIP_0716 elongation factor Ts K02357 tsf; elongation factor Ts D SCIP_0178 elongation factor Tu K02358 tuf; elongation factor Tu D SCIP_0177 elongation factor G K02355 fusA; elongation factor G D SCIP_0439 peptide chain release factor K02835 prfA; peptide chain release factor 1 D SCIP_0714 ribosome recycling factor K02838 frr; ribosome recycling factor D SCIP_0440 putative methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D SCIP_0506 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D SCIP_0215 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D SCIP_0287 elongation factor P K02356 efp; elongation factor P D SCIP_0463 peptide chain release factor K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:sij03110] D SCIP_0334 Clp protease K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D SCIP_0993 Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D SCIP_0725 ATP-dependent Clp protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D SCIP_1348 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D SCIP_1001 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SCIP_0666 chaperone protein K03686 dnaJ; molecular chaperone DnaJ D SCIP_1346 chaperone K03686 dnaJ; molecular chaperone DnaJ D SCIP_1347 chaperone GrpE K03687 GRPE; molecular chaperone GrpE D SCIP_1265 conserved hypothetical protein K13993 HSP20; HSP20 family protein D SCIP_0254 co-chaperonin GroES K04078 groES; chaperonin GroES D SCIP_0420 zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D SCIP_0163 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D SCIP_0787 putative protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96] D SCIP_0455 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D SCIP_0786 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D SCIP_1103 thioredoxin K03671 TXN; thioredoxin D SCIP_0324 conserved hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:sij04131] D SCIP_0858 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SCIP_0402 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D SCIP_0545 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:sij03032] D SCIP_1016 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D SCIP_1014 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D SCIP_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SCIP_0120 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D SCIP_0888 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D SCIP_1163 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D SCIP_0460 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D SCIP_0315 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SCIP_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SCIP_0935 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SCIP_1291 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SCIP_0278 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0862 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_1314 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SCIP_0352 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D SCIP_0487 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SCIP_1296 putative DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SCIP_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SCIP_0756 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SCIP_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SCIP_0758 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SCIP_1293 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:sij03036] D SCIP_1084 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D SCIP_1014 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D SCIP_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D SCIP_0136 conserved hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D SCIP_0868 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D SCIP_0815 conserved hypothetical protein K05896 scpA; segregation and condensation protein A D SCIP_0814 conserved hypothetical protein K06024 scpB; segregation and condensation protein B D SCIP_0464 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D SCIP_0880 peptidoglycan synthase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D SCIP_0778 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D SCIP_0517 conserved hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D SCIP_1375 putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D SCIP_0872 cell division protein K03589 ftsQ; cell division protein FtsQ D SCIP_0875 putative cell division protein K03588 ftsW; cell division protein FtsW D SCIP_0465 cell division protein K09811 ftsX; cell division transport system permease protein D SCIP_0309 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SCIP_0310 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF D SCIP_0816 conserved hypothetical protein K03496 parA; chromosome partitioning protein D SCIP_1440 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D SCIP_1439 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D SCIP_1441 glucose-inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SCIP_0805 tyrosine recombinase K03733 xerC; integrase/recombinase XerC D SCIP_0823 recombinase K04763 xerD; integrase/recombinase XerD D SCIP_0488 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D SCIP_0659 conserved hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:sij03400] D SCIP_0900 conserved hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SCIP_1003 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D SCIP_0012 conserved hypothetical protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D SCIP_1021 putative adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D SCIP_1267 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D SCIP_0752 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D SCIP_0382 putative DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D SCIP_1243 DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D SCIP_0154 putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D SCIP_0487 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D SCIP_0656 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D SCIP_0560 excinuclease subunit A K03701 uvrA; excinuclease ABC subunit A D SCIP_0543 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D SCIP_0657 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D SCIP_0297 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_1070 putative DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_0582 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D SCIP_0224 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D SCIP_0225 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D SCIP_0219 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D SCIP_0227 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D SCIP_0507 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D SCIP_0980 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D SCIP_0981 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D SCIP_0315 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D SCIP_0002 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D SCIP_0935 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D SCIP_1291 DNA polymerase III delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D SCIP_0278 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_0862 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D SCIP_1314 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D SCIP_1163 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D SCIP_0460 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D SCIP_1296 putative DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SCIP_0773 recombinase RecA K03553 recA; recombination protein RecA D SCIP_0675 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D SCIP_0676 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D SCIP_0674 holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D SCIP_0229 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D SCIP_1019 DNA repair protein K04485 radA; DNA repair protein RadA/Sms D SCIP_0003 recombination protein RecF K03629 recF; DNA replication and repair protein RecF D SCIP_1134 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D SCIP_1064 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D SCIP_1313 recombination protein RecR K06187 recR; recombination protein RecR D SCIP_0954 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D SCIP_0362 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 D SCIP_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SCIP_0756 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D SCIP_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SCIP_0758 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D SCIP_1293 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D SCIP_1014 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D SCIP_0272 putative DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D SCIP_0525 putative DNA polymerase K03502 umuC; DNA polymerase V D SCIP_0526 putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D SCIP_0887 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D SCIP_0772 putative regulatory protein K03565 recX; regulatory protein D SCIP_0577 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D SCIP_1325 conserved hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] C 03029 Mitochondrial biogenesis [BR:sij03029] D SCIP_0180 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D SCIP_0829 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D SCIP_0716 elongation factor Ts K02357 tsf; elongation factor Ts D SCIP_0178 elongation factor Tu K02358 tuf; elongation factor Tu D SCIP_0177 elongation factor G K02355 fusA; elongation factor G D SCIP_0627 GTP-binding protein K03595 era; GTPase D SCIP_0959 tyrosyl-tRNA synthase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCIP_0939 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCIP_0748 aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SCIP_0307 glycyl-tRNA synthase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SCIP_0331 arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SCIP_0345 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D SCIP_0346 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D SCIP_0344 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D SCIP_1163 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D SCIP_0460 conserved hypothetical protein K03111 ssb; single-strand DNA-binding protein D SCIP_1348 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D SCIP_1347 chaperone GrpE K03687 GRPE; molecular chaperone GrpE D SCIP_1001 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SCIP_0254 co-chaperonin GroES K04078 groES; chaperonin GroES D SCIP_0666 chaperone protein K03686 dnaJ; molecular chaperone DnaJ D SCIP_1346 chaperone K03686 dnaJ; molecular chaperone DnaJ D SCIP_0488 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D SCIP_1443 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:sij02000] D SCIP_1174 ABC transporter ATP-binding and permease components K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_1173 ABC transporter ATP-binding and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0640 putative ABC transporter ATP-binding and permease components K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0128 ABC transporter ATP-binding component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0127 ABC transporter ATP-binding component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0641 putative ABC transporter ATP-binding and permease components K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D SCIP_0397 putative ABC transporter ATP-binding component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D SCIP_0398 putative ABC transporter ATP-binding and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D SCIP_1331 putative ABC transporter ATP-binding component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D SCIP_1332 putative truncated ABC transporter ATP-binding component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D SCIP_0988 putative ABC transporter ATP-binding component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D SCIP_0342 putative ABC transporter ATP-binding component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein D SCIP_1088 ABC transporter ATP-binding component K15738 uup; ABC transport system ATP-binding/permease protein D SCIP_0233 putative nitrate/sulfonate/bicarbonate ABC transporter permease component K05845 opuC; osmoprotectant transport system substrate-binding protein D SCIP_0234 putative glycine betaine/L-proline ABC transporter ATP-binding component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D SCIP_0332 putative ABC transporter substrate binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D SCIP_0022 ABC transporter ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D SCIP_0449 ABC transporter substrate binding component K25086 musE; maltose transport system substrate-binding protein D SCIP_1249 hypothetical protein K25086 musE; maltose transport system substrate-binding protein D SCIP_1248 putative ABC transporter permease component K25087 musF; maltose transport system permease protein D SCIP_0447 oligosaccharide ABC transporter permease component K25087 musF; maltose transport system permease protein D SCIP_1247 putative ABC transporter permease component K25088 musG; maltose transport system permease protein D SCIP_0448 oligosaccharide ABC transporter permease component K25088 musG; maltose transport system permease protein D SCIP_0442 putative ABC transporter substrate binding component K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D SCIP_0443 putative ABC transporter permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D SCIP_0444 putative ABC transporter permease component K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D SCIP_0054 sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_0369 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_1201 putative ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_1207 putative sugar ABC transporter substrate binding component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D SCIP_0055 sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_0370 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_1200 putative ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_1206 putative sugar ABC transporter permease component K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D SCIP_0056 sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_0371 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_1199 putative ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_1204 putative truncated sugar ABC transporter permease component K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D SCIP_0426 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D SCIP_1193 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D SCIP_1423 putative ABC transporter substrate binding component K17318 lplA; putative aldouronate transport system substrate-binding protein D SCIP_1195 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D SCIP_1421 putative ABC transporter permease component K17319 lplB; putative aldouronate transport system permease protein D SCIP_1194 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D SCIP_1420 putative ABC transporter permease component K17320 lplC; putative aldouronate transport system permease protein D SCIP_0852 putative sugar ABC transporter substrate binding component K10546 chvE; putative multiple sugar transport system substrate-binding protein D SCIP_0850 putative sugar ABC transporter permease component K10547 gguB; putative multiple sugar transport system permease protein D SCIP_0851 putative sugar ABC transporter ATP-binding component K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D SCIP_1075 ribose ABC transporter substrate binding component K10439 rbsB; ribose transport system substrate-binding protein D SCIP_1076 ribose ABC transporter permease component K10440 rbsC; ribose transport system permease protein D SCIP_1077 ribose ABC transporter ATP-binding component K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D SCIP_1251 sugar ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D SCIP_1178 putative ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D SCIP_0432 putative ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D SCIP_0260 sugar ABC transporter substrate binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D SCIP_0261 sugar ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D SCIP_1177 putative ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D SCIP_1253 sugar ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D SCIP_0433 ABC transporter permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D SCIP_0262 ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D SCIP_1176 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D SCIP_1252 ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D SCIP_0434 putative ABC transporter permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D SCIP_1111 phosphate ABC transporter substrate binding component K02040 pstS; phosphate transport system substrate-binding protein D SCIP_1110 phosphate ABC transporter permease component K02037 pstC; phosphate transport system permease protein D SCIP_1109 phosphate ABC transporter permease component K02038 pstA; phosphate transport system permease protein D SCIP_1108 phosphate ABC transporter ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D SCIP_0940 putative ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D SCIP_0832 glutamate ABC transporter substrate binding component K10005 gluB; glutamate transport system substrate-binding protein D SCIP_0831 glutamate ABC transporter permease component K10006 gluC; glutamate transport system permease protein D SCIP_0830 glutamate ABC transporter permease component K10007 gluD; glutamate transport system permease protein D SCIP_0833 glutamate ABC transporter ATP-binding component K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D SCIP_0284 putative metal ABC transporter substrate binding component K02073 metQ; D-methionine transport system substrate-binding protein D SCIP_0286 putative metal ABC transporter permease component K02072 metI; D-methionine transport system permease protein D SCIP_0285 putative metal ABC transporter ATP-binding component K02071 metN; D-methionine transport system ATP-binding protein D SCIP_0468 putative ABC transporter substrate binding component K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D SCIP_0469 putative ABC transporter permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D SCIP_0470 putative ABC transporter ATP-binding component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D SCIP_0804 putative ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0809 dipeptide ABC transporter substrate binding component K15580 oppA; oligopeptide transport system substrate-binding protein D SCIP_0808 dipeptide ABC transporter permease component K15581 oppB; oligopeptide transport system permease protein D SCIP_0807 dipeptide ABC transporter permease component K15582 oppC; oligopeptide transport system permease protein D SCIP_0806 dipeptide ABC transporter ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein D SCIP_0822 dipeptide/oligopeptide ABC transporter substrate binding component K13889 gsiB; glutathione transport system substrate-binding protein D SCIP_0817 dipeptide/oligopeptide ABC transporter permease component K13890 gsiC; glutathione transport system permease protein D SCIP_0818 dipeptide/oligopeptide ABC transporter permease component K13891 gsiD; glutathione transport system permease protein D SCIP_0819 dipeptide/oligopeptide ABC transporter ATP-binding component K13892 gsiA; glutathione transport system ATP-binding protein D SCIP_0895 peptides ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_1268 putative ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_0820 dipeptide/oligopeptide ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_0821 putative peptide ABC transporter substrate binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D SCIP_0894 peptides ABC transporter substrate binding component K02033 ABC.PE.P; peptide/nickel transport system permease protein D SCIP_0893 peptides ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D SCIP_0892 peptides ABC transporter ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein D SCIP_1229 putative truncated ABC transporter permease component K16785 ecfT; energy-coupling factor transport system permease protein D SCIP_1230 putative ABC transporter ATP-binding component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D SCIP_0481 ABC transporter ATP-binding component K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-] D SCIP_0497 ABC transporter ATP-binding component K24040 ecfTA; energy-coupling factor transport system permease/ATP-binding protein [EC:7.-.-.-] D SCIP_0496 conserved hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D SCIP_1231 putative ABC transporter permease component K16925 ykoE; energy-coupling factor transport system permease protein D SCIP_0538 ABC transporter substrate binding component K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D SCIP_0536 ABC transporter permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D SCIP_0537 ABC transporter ATP-binding component K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D SCIP_0742 putative ABC transporter permease component K11051 cylB; multidrug/hemolysin transport system permease protein D SCIP_0741 putative ABC transporter ATP-binding component K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D SCIP_0465 cell division protein K09811 ftsX; cell division transport system permease protein D SCIP_0464 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D SCIP_0295 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_1155 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_0151 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_0172 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_0173 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_0222 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_0114 ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_1336 putative ABC transporter permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_1338 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D SCIP_0609 putative ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_0294 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_1154 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_0152 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_0171 putative ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_1426 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_0221 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_1337 putative ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_0115 ABC transporter ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D SCIP_0319 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D SCIP_1049 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D SCIP_1051 putative transport protein K02004 ABC.CD.P; putative ABC transport system permease protein D SCIP_0068 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D SCIP_0069 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D SCIP_0946 putative ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein D SCIP_0318 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SCIP_1048 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SCIP_1052 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SCIP_0070 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SCIP_0945 putative ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SCIP_0986 ABC transporter ATP-binding component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D SCIP_0614 putative ABC transporter ATP-binding component K09013 sufC; Fe-S cluster assembly ATP-binding protein D SCIP_0035 putative multidrug transport protein K26937 dinF; MATE family, multidrug efflux pump D SCIP_0825 putative fucose transport protein K02429 fucP; MFS transporter, FHS family, L-fucose permease D SCIP_0682 conserved hypothetical protein K06188 aqpZ; aquaporin Z D SCIP_1287 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator D SCIP_0567 potassium transport protein K10716 kch; voltage-gated potassium channel D SCIP_1212 putative glutathionine S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D SCIP_1008 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D SCIP_0355 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D SCIP_0941 putative magnesium and cobalt transport protein K03284 corA; magnesium transporter D SCIP_1352 conserved hypothetical protein K06199 crcB; fluoride exporter D SCIP_1353 conserved hypothetical protein K06199 crcB; fluoride exporter D SCIP_0137 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SCIP_0626 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SCIP_0125 putative transport protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family D SCIP_0928 putative Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family D SCIP_0645 putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D SCIP_1107 putative transport protein K06901 pbuG; adenine/guanine/hypoxanthine permease D SCIP_0392 nucleoside transport protein K16323 yxjA; purine nucleoside transport protein D SCIP_0728 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family D SCIP_1357 putative voltage gated channel protein K03281 clcA; chloride channel protein, CIC family D SCIP_1437 conserved hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D SCIP_1280 putative transport protein K13936 mdcF; malonate transporter and related proteins D SCIP_0040 potassium transport protein K03549 kup; KUP system potassium uptake protein D SCIP_0482 conserved hypothetical protein K23675 fmnP; riboflavin transporter D SCIP_0875 putative cell division protein K03588 ftsW; cell division protein FtsW D SCIP_0065 conserved hypothetical protein K07243 FTR; high-affinity iron transporter D SCIP_0066 conserved hypothetical protein K07230 p19; periplasmic iron binding protein D SCIP_0450 conserved hypothetical protein K25089 musI; membrane protein C 02044 Secretion system [BR:sij02044] D SCIP_0595 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D SCIP_1320 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D SCIP_1319 conserved hypothetical protein K12510 tadB; tight adherence protein B D SCIP_0311 conserved hypothetical protein K02221 yggT; YggT family protein D SCIP_0938 conserved hypothetical protein K02237 comEA; competence protein ComEA D SCIP_0770 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D SCIP_1119 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D SCIP_0662 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D SCIP_0211 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D SCIP_1091 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D SCIP_0034 signal recognition particle-docking protein K03110 ftsY; fused signal recognition particle receptor D SCIP_0677 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC D SCIP_1443 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:sij02042] D SCIP_0137 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SCIP_0626 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D SCIP_0514 conserved hypothetical protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:sij02022] D SCIP_0404 two-component sensor kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D SCIP_0997 two-component sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D SCIP_0998 two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator D SCIP_0293 hypothetical protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D SCIP_0515 two-component sensor kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D SCIP_0548 two-component response regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:sij02035] D SCIP_0595 conserved hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D SCIP_1320 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:sij04812] D SCIP_0309 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SCIP_0816 conserved hypothetical protein K03496 parA; chromosome partitioning protein D SCIP_1440 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D SCIP_1439 putative chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:sij04147] D SCIP_0508 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D SCIP_0858 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D SCIP_0660 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D SCIP_0545 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D SCIP_0455 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D SCIP_1001 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D SCIP_1348 chaperone DnaK K04043 dnaK; molecular chaperone DnaK D SCIP_1273 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D SCIP_0721 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D SCIP_0454 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D SCIP_0178 elongation factor Tu K02358 tuf; elongation factor Tu D SCIP_0623 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D SCIP_0632 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0968 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D SCIP_0629 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0719 putative long-chain-fatty acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0723 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D SCIP_0384 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D SCIP_0212 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D SCIP_0678 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D SCIP_0961 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D SCIP_0962 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D SCIP_1191 putative alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D SCIP_1026 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D SCIP_0529 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D SCIP_0975 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0491 glutamine synthase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D SCIP_0680 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D SCIP_0493 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D SCIP_0046 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D SCIP_0661 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D SCIP_0402 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:sij02048] D SCIP_0362 CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 D SCIP_0363 CRISPR-associated protein K09951 cas2; CRISPR-associated protein Cas2 D SCIP_0361 CRISPR-associated protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] D SCIP_0364 restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D SCIP_0366 conserved hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D SCIP_0368 restriction-modification system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D SCIP_0365 conserved hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D SCIP_1296 putative DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SCIP_0328 putative ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D SCIP_0329 conserved hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D SCIP_0501 hypothetical protein K07448 mrr; restriction system protein D SCIP_0602 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D SCIP_0796 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D SCIP_1276 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D SCIP_0797 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D SCIP_1277 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D SCIP_0601 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J D SCIP_0078 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D SCIP_0309 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SCIP_1145 glutamyl-tRNA synthase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:sij01504] D SCIP_0342 putative ABC transporter ATP-binding component K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:sij03100] D SCIP_tRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SCIP_tRNA31 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SCIP_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D SCIP_tRNA33 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA30 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D SCIP_tRNA28 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D SCIP_tRNA15 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D SCIP_tRNA24 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D SCIP_tRNA32 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SCIP_tRNA38 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D SCIP_tRNA16 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SCIP_tRNA39 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D SCIP_tRNA11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SCIP_tRNA23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SCIP_tRNA44 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D SCIP_tRNA29 tRNA-His K14226 tRNA-His; tRNA His D SCIP_tRNA03 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D SCIP_tRNA45 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA20 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA22 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA37 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D SCIP_tRNA43 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SCIP_tRNA40 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SCIP_tRNA42 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D SCIP_tRNA04 tRNA-Met K14230 tRNA-Met; tRNA Met D SCIP_tRNA08 tRNA-Met K14230 tRNA-Met; tRNA Met D SCIP_tRNA17 tRNA-Met K14230 tRNA-Met; tRNA Met D SCIP_tRNA14 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D SCIP_tRNA13 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SCIP_tRNA27 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SCIP_tRNA21 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D SCIP_tRNA05 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA09 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA41 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA12 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D SCIP_tRNA07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SCIP_tRNA36 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SCIP_tRNA01 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D SCIP_tRNA35 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D SCIP_tRNA06 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D SCIP_tRNA26 tRNA-Val K14237 tRNA-Val; tRNA Val D SCIP_tRNA34 tRNA-Val K14237 tRNA-Val; tRNA Val D SCIP_tRNA25 tRNA-Val K14237 tRNA-Val; tRNA Val D SCIP_16SrRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SCIP_16SrRNA02 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D SCIP_23SrRNA01 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D SCIP_5SrRNA01 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D SCIP_5SrRNA02 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D SCIP_0226 conserved hypothetical protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D SCIP_0381 putative reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D SCIP_1210 L-lactate dehydrogenase K10530 lctO; L-lactate oxidase [EC:1.1.3.2] D SCIP_0570 conserved hypothetical protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D SCIP_1221 dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D SCIP_1363 putative ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D SCIP_0148 ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D SCIP_0731 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D SCIP_0569 conserved hypothetical protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D SCIP_0711 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D SCIP_0644 glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D SCIP_0304 conserved hypothetical protein K01023 assT; arylsulfate sulfotransferase [EC:2.8.2.22] D SCIP_0947 conserved hypothetical protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D SCIP_1080 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D SCIP_0643 putative phosphoglycerate K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D SCIP_0039 putative DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D SCIP_0320 conserved hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D SCIP_1189 putative alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D SCIP_1198 putative alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D SCIP_0372 conserved hypothetical protein K27494 exoMA1; D-arabinan exo alpha-(1,3)/(1,5)-arabinofuranosidase (non-reducing end) [EC:3.2.1.225] D SCIP_0303 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D SCIP_0718 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D SCIP_0380 conserved hypothetical protein K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-] D SCIP_1004 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D SCIP_0473 putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D SCIP_0512 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D SCIP_0865 conserved hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12] D SCIP_0026 cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D SCIP_1330 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] D SCIP_0784 putative cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D SCIP_0616 conserved hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins D SCIP_1157 oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase D SCIP_1214 dehydrogenase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D SCIP_1285 conserved hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D SCIP_1104 conserved hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB D SCIP_1431 conserved hypothetical protein K21688 rpfB; resuscitation-promoting factor RpfB D SCIP_1013 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D SCIP_0131 conserved hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein C 99988 Secondary metabolism D SCIP_0471 oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D SCIP_0132 putative NADPH-dependent reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D SCIP_0032 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D SCIP_0996 cold shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D SCIP_0729 trigger factor K03545 tig; trigger factor D SCIP_0467 SsrA-binding protein K03664 smpB; SsrA-binding protein D SCIP_0922 conserved hypothetical protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D SCIP_1255 endonuclease III K07457 K07457; endonuclease III related protein D SCIP_0923 conserved hypothetical protein K04096 smf; DNA processing protein D SCIP_0736 recombination factor protein RarA K07478 ycaJ; putative ATPase D SCIP_0143 putative transposase K07482 K07482; transposase, IS30 family D SCIP_1228 putative transposase K07482 K07482; transposase, IS30 family D SCIP_1239 putative transposase K07482 K07482; transposase, IS30 family D SCIP_1246 putative transposase K07482 K07482; transposase, IS30 family D SCIP_1222 transposase K07485 K07485; transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D SCIP_1035 truncated conserved hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D SCIP_0064 amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D SCIP_0071 aromatic amino acid transport protein K03293 TC.AAT; amino acid transporter, AAT family D SCIP_0098 putative transport protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D SCIP_1442 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein D SCIP_0611 putative phage recombinase K06400 spoIVCA; site-specific DNA recombinase C 99993 Cell motility C 99995 Signaling proteins D SCIP_0813 GTP-binding protein K06207 typA; GTP-binding protein D SCIP_1023 conserved hypothetical protein K07166 K07166; ACT domain-containing protein D SCIP_0624 putative phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins C 99994 Others D SCIP_0403 two-component response regulator K02039 phoU; phosphate transport system protein B B 09194 Poorly characterized C 99996 General function prediction only D SCIP_0445 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D SCIP_0612 putative ABC transporter permease component K09014 sufB; Fe-S cluster assembly protein SufB D SCIP_0613 putative ABC transporter permease component K09015 sufD; Fe-S cluster assembly protein SufD D SCIP_0214 conserved hypothetical protein K03744 lemA; LemA protein D SCIP_1418 conserved hypothetical protein K03975 dedA; membrane-associated protein D SCIP_1387 conserved hypothetical protein K01421 yhgE; putative membrane protein D SCIP_1388 conserved hypothetical protein K01421 yhgE; putative membrane protein D SCIP_1354 conserved hypothetical protein K08972 K08972; putative membrane protein D SCIP_1416 hypothetical protein K08981 K08981; putative membrane protein D SCIP_1386 conserved hypothetical protein K08987 K08987; putative membrane protein C 99997 Function unknown D SCIP_0799 hydrolase K06889 K06889; uncharacterized protein D SCIP_0782 conserved hypothetical protein K06890 K06890; uncharacterized protein D SCIP_0048 conserved hypothetical protein K06950 K06950; uncharacterized protein D SCIP_0142 phosphohydrolase K06950 K06950; uncharacterized protein D SCIP_0901 putative sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein D SCIP_1093 conserved hypothetical protein K06960 K06960; uncharacterized protein D SCIP_0306 conserved hypothetical protein K07133 K07133; uncharacterized protein D SCIP_0564 conserved hypothetical protein K07133 K07133; uncharacterized protein D SCIP_0109 conserved hypothetical protein K07133 K07133; uncharacterized protein D SCIP_0788 conserved hypothetical protein K07150 K07150; uncharacterized protein D SCIP_0510 conserved hypothetical protein K09009 K09009; uncharacterized protein D SCIP_1024 conserved hypothetical protein K09157 K09157; uncharacterized protein D SCIP_0984 conserved hypothetical protein K09384 K09384; uncharacterized protein D SCIP_0747 conserved hypothetical protein K09702 K09702; uncharacterized protein D SCIP_0565 conserved hypothetical protein K09974 K09974; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 6, 2024