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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transfer RNA Biogenesis - Sinorhizobium sp. CCBAU 05631</h2>
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A<b>Eukaryotic type</b>
B  5'processing factors
C    Ribonucrease P
B  3'processing and CCA adding factors
C    3'processing factors
D      SS05631_c22760 macromolecule metabolism	K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] 
D      SS05631_c09060 macromolecule metabolism	K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] 
C    CCA adding factors
B  tRNA spricing factors
C    tRNA splicing endonuclease complex
C    tRNA splicing ligase complex
C    Other tRNA splicing factors
B  tRNA transport factors
C    tRNA export factors
C    tRNA import factors
B  Aminoacyl-tRNA synthetases (AARSs)
C    Multi-aminoacyl-tRNA synthetase complex (MSC)
D      SS05631_c27600 Glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
D      SS05631_c10370 Prolyl-tRNA synthetase, bacterial type	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] 
D      SS05631_c05040 Isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] 
D      SS05631_c37580 Leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] 
D      SS05631_c17670 Methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] 
D      SS05631_c13070 Arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] 
D      SS05631_c27610 Lysyl-tRNA synthetase (class II)	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] 
D      SS05631_c09260 Aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] 
C    Other AARSs
D      SS05631_c18050 Alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] 
D      SS05631_c12010 Threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] 
D      SS05631_c13160 Seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] 
D      SS05631_c08430 Cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] 
D      SS05631_c12990 Valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] 
D      SS05631_c04910 Histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] 
D      SS05631_c40640 Phenylalanyl-tRNA synthetase alpha chain	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] 
D      SS05631_c40650 Phenylalanyl-tRNA synthetase beta chain	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] 
D      SS05631_c16100 Tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] 
D      SS05631_c21190 Tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] 
D      SS05631_c00380 Tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] 
C    Trans-editing factors
D      SS05631_c14980 Alanyl-tRNA synthetase domain protein	K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] 
C    AARS associated factors
D      SS05631_c12720 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] 
B  tRNA modification factors
C    Deaminases
C    Dihydorouridine synthases
C    Methylthiotransferase
C    Methyltransferases
D      SS05631_c00530 tRNA (guanine46-N7-)-methyltransferase	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] 
C    Psudouridine synthases
D      SS05631_c00620 tRNA pseudouridine synthase A	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] 
D      SS05631_c40060 tRNA pseudouridine synthase B	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] 
C    Thiolation factors
D      SS05631_a45810 Cysteine desulfurase, NifS subfamily	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
D      SS05631_c16170 Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
C    KEOPS/EKC complex
C    Elongator complex
C    Elongator related proteins
C    Other tRNA modification factors
D      SS05631_c05770 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
D      SS05631_c21810 tRNA dimethylallyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
D      SS05631_c37650 GTPase and tRNA-U34 5-formylation enzyme TrmE	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] 
D      SS05631_c37640 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
B  tRNA degradation factors
C    TRAMP complex
C    Rapid tRNA decay (RTD) pathway factors
D      SS05631_c26310 3'(2'),5'-bisphosphate nucleotidase	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] 
D      SS05631_b60010 3'(2'),5'-bisphosphate nucleotidase	K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] 
C    Other tRNA degradation factors
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A<b>Prokaryotic type</b>
B  5'processing factors
C    Ribonucrease P
D      SS05631_c00840 Ribonuclease P protein component	K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] 
B  3'processing and CCA adding factors
C    3'processing factors
D      SS05631_c00090 Ribonuclease PH	K00989 rph; ribonuclease PH [EC:2.7.7.56] 
D      SS05631_c09230 Ribonuclease D	K03684 rnd; ribonuclease D [EC:3.1.13.5] 
D      SS05631_c40310 Ribonuclease D related protein	K03684 rnd; ribonuclease D [EC:3.1.13.5] 
D      SS05631_c22760 macromolecule metabolism	K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] 
D      SS05631_c09060 macromolecule metabolism	K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] 
C    CCA adding factors
B  tRNA spricing factors
C    tRNA splicing endonucleases
C    tRNA splicing ligases
C    Other tRNA splicing factors
D      SS05631_c36380 2'-5' RNA ligase	K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] 
B  tRNA transport factors
C    tRNA export factors
B  Aminoacyl-tRNA synthetases (AARSs)
C    Multi-aminoacyl-tRNA synthetase complex (MSC)
D      SS05631_c37580 Leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] 
D      SS05631_c10370 Prolyl-tRNA synthetase, bacterial type	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] 
C    Other AARSs
D      SS05631_c16100 Tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] 
D      SS05631_c21190 Tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] 
D      SS05631_c00380 Tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] 
D      SS05631_c12010 Threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] 
D      SS05631_c05040 Isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] 
D      SS05631_c27610 Lysyl-tRNA synthetase (class II)	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] 
D      SS05631_c18050 Alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] 
D      SS05631_c12990 Valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] 
D      SS05631_c17670 Methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] 
D      SS05631_c13160 Seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] 
D      SS05631_c09260 Aspartyl-tRNA synthetase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] 
D      SS05631_c05550 Glycyl-tRNA synthetase alpha chain	K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] 
D      SS05631_c05590 Glycyl-tRNA synthetase beta chain	K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] 
D      SS05631_c08430 Cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] 
D      SS05631_c27600 Glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] 
D      SS05631_c13070 Arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] 
D      SS05631_c40640 Phenylalanyl-tRNA synthetase alpha chain	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] 
D      SS05631_c40650 Phenylalanyl-tRNA synthetase beta chain	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] 
D      SS05631_c04910 Histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] 
D      SS05631_c30480 glutamyl-Q-tRNA synthetase	K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] 
C    Trans-editing factors
D      SS05631_c40830 Cys-tRNA(Pro) deacylase YbaK	K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] 
D      SS05631_c00920 Uncharacterized protein	K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] 
D      SS05631_c35950 aminoacyl-tRNA editing enzyme-like protein YbaK, ProX-like protein	K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] 
D      SS05631_c14980 Alanyl-tRNA synthetase domain protein	K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-] 
B  tRNA modification factors
C    Deaminases
D      SS05631_c05070 tRNA-specific adenosine-34 deaminase	K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] 
C    Dihydorouridine synthases
D      SS05631_c19290 tRNA dihydrouridine synthase A	K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] 
D      SS05631_c12390 tRNA dihydrouridine synthase B	K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] 
C    Methylthiotransferases
D      SS05631_c00450 tRNA-i(6)A37 methylthiotransferase	K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] 
D      SS05631_c36550 tRNA-t(6)A37 methylthiotransferase	K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] 
C    Methyltransferases
D      SS05631_c31200 Methyltransferase type 11	K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] 
D      SS05631_c18010 tRNA:Cm32/Um32 methyltransferase	K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] 
D      SS05631_c13290 tRNA:m(5)U-54 MTase gid	K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] 
D      SS05631_c00530 tRNA (guanine46-N7-)-methyltransferase	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] 
D      SS05631_c36630 tRNA (Guanine37-N1) -methyltransferase	K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] 
D      SS05631_c37650 GTPase and tRNA-U34 5-formylation enzyme TrmE	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] 
D      SS05631_c18330 tRNA (cytidine(34)-2'-O)-methyltransferase	K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] 
D      SS05631_c00290 macromolecule metabolism	K03437 spoU; RNA methyltransferase, TrmH family 
C    Psudouridine synthases
D      SS05631_c00620 tRNA pseudouridine synthase A	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] 
D      SS05631_c40060 tRNA pseudouridine synthase B	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] 
C    Thiolation factors
D      SS05631_c31570 tRNA-specific 2-thiouridylase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] 
D      SS05631_c17950 tRNA(Cytosine32)-2-thiocytidine synthetase	K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA 
D      SS05631_c30960 hypothetical protein	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] 
D      SS05631_c16230 Iron binding protein SufA for iron-sulfur cluster assembly	K13628 iscA; iron-sulfur cluster assembly protein 
D      SS05631_a45810 Cysteine desulfurase, NifS subfamily	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
D      SS05631_c16170 Cysteine desulfurase	K04487 iscS; cysteine desulfurase [EC:2.8.1.7] 
D      SS05631_c08350 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress	K06980 ygfZ; tRNA-modifying protein YgfZ 
C    KEOPS/EKC complex
C    Other tRNA modification factors
D      SS05631_c37640 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
D      SS05631_c21810 tRNA dimethylallyltransferase	K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
D      SS05631_c17470 S-adenosylmethionine:tRNA ribosyltransferase-isomerase	K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] 
D      SS05631_b55620 Queuosine Biosynthesis QueC ATPase	K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] 
D      SS05631_b55630 6-carboxytetrahydropterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] 
D      SS05631_b55640 Queuosine Biosynthesis QueE Radical SAM	K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] 
D      SS05631_c24510 NADPH dependent preQ0 reductase	K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] 
D      SS05631_c41050 Epoxyqueuosine (oQ) reductase QueG	K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] 
D      SS05631_c17480 tRNA-guanine transglycosylase	K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] 
D      SS05631_c31800 tRNA(Ile)-lysidine synthetase	K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] 
D      SS05631_c00410 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA	K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB 
D      SS05631_c05770 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
D      SS05631_c35150 TsaD/Kae1/Qri7 protein	K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] 
B  tRNA degradation factors
C    SS05631_c10580 3'-to-5' exoribonuclease RNase R	K12573 rnr; ribonuclease R [EC:3.1.13.1] 
C    SS05631_c40100 Polyribonucleotide nucleotidyltransferase	K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 
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#Last updated: February 29, 2024