+F Repair protein KO #

  DNA Repair and Recombination Proteins - Streptomyces leeuwenhoekii

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D sle_13280 sle_13280; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D sle_15240 sle_15240; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D sle_51700 sle_51700; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D sle_64690 sle_64690; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E sle_57620 sle_57620; Uracil-DNA glycosylase 2 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E sle_59790 sle_59790; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E sle_53380 sle_53380; Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E sle_31890 sle_31890; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E sle_32870 sle_32870; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex E sle_39350 sle_39350; Type III Restriction Protein Res Subunit K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D sle_23290 sle_23290; NUDIX Hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_26360 sle_26360; Putative mutator mutT2 protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_46010 sle_46010; NUDIX Hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_59160 sle_59160; NUDIX Hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_18180 sle_18180; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D sle_13280 sle_13280; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D sle_15240 sle_15240; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D sle_51700 sle_51700; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D sle_64690 sle_64690; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D sle_60640 sle_60640; Alpha-ketoglutarate-dependent dioxygenase AlkB homolog K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] C BER (base exicision repair) D DNA glycosylases E sle_57620 sle_57620; Uracil-DNA glycosylase 2 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E sle_59790 sle_59790; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E sle_58130 sle_58130; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] E sle_31060 sle_31060; Phage SPO1 DNA Polymerase-Related Protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E sle_51520 sle_51520; Uncharacterized protein Rv1259/MT1297.1 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E sle_13290 sle_13290; Probable bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E sle_15250 sle_15250; Probable bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E sle_53380 sle_53380; Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E sle_31890 sle_31890; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E sle_25990 sle_25990; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E sle_07210 sle_07210; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E sle_20800 sle_20800; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E sle_19090 sle_19090; Putative DNA glycosylase SCO5760 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] E sle_46120 sle_46120; Putative DNA glycosylase Rv2464c/MT2539 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] E sle_32870 sle_32870; Ultraviolet N-glycosylase/AP lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E sle_13710 sle_13710; Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] E sle_41140 sle_41140; Exodeoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] E sle_50270 sle_50270; Probable endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] E sle_10930 sle_10930; Endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] D RecJ D DNA ligase E sle_21610 sle_21610; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E sle_51350 sle_51350; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E sle_06940 sle_06940; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A E sle_51830 sle_51830; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A E sle_51730 sle_51730; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B E sle_51880 sle_51880; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C E sle_25540 sle_25540; Probable DNA helicase II homolog K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E sle_25580 sle_25580; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E sle_28790 sle_28790; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E sle_51350 sle_51350; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E sle_21610 sle_21610; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F sle_29840 sle_29840; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F sle_29830 sle_29830; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F sle_29360 sle_29360; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F sle_56310 sle_56310; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F sle_41700 sle_41700; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases E sle_26560 sle_26560; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E sle_26570 sle_26570; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E sle_50770 sle_50770; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E sle_35950 dnaN; DnaN DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E sle_46720 sle_46720; DNA Polymerase III Subunit Delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E sle_32580 sle_32580; DNA polymerase III subunit gamma/tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E sle_15900 sle_15900; DNA Polymerase III Subunit Epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E sle_53060 sle_53060; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E sle_55770 sle_55770; DNA Polymerase III Subunit Epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNA ligase E sle_21610 sle_21610; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E sle_25540 sle_25540; Probable DNA helicase II homolog K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E sle_25580 sle_25580; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E sle_28790 sle_28790; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E sle1_059 sle1_059; pZL12-1; highly conserved K03111 ssb; single-strand DNA-binding protein E sle_36240 sle_36240; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein E sle_45470 sle_45470; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein E sle_43990 sle_43990; NaeI very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E sle_45070 sle_45070; Uncharacterized protein yrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E sle_19040 sle_19040; Protein RecA K03553 recA; recombination protein RecA E sle_55920 sle_55920; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA E sle_55930 sle_55930; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E sle_55910 sle_55910; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E sle_56340 sle_56340; Putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E sle_57970 sle_57970; Nuclease sbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50 E sle_57960 sle_57960; Nuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E sle_19040 sle_19040; Protein RecA K03553 recA; recombination protein RecA E sle_31830 sle_31830; DNA repair protein RadA homolog K04485 radA; DNA repair protein RadA/Sms E sle_35930 sle_35930; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF E sle_20870 sle_20870; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E sle_47080 sle_47080; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) E sle_33540 sle_33540; Recombination protein recR K06187 recR; recombination protein RecR E sle_53510 sle_53510; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N) E sle_55920 sle_55920; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA E sle_55930 sle_55930; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E sle_55910 sle_55910; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor E sle_60930 sle_60930; Uncharacterized protein MJ0378 K15342 cas1; CRISP-associated protein Cas1 D Archaeal homologous recombinant proteins E sle_57970 sle_57970; Nuclease sbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50 E sle_57960 sle_57960; Nuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 E sle_37220 sle_37220; Uncharacterized protein yjgR K06915 herA; DNA double-strand break repair helicase HerA and related ATPase C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex E sle1_073 sle1_073 K10979 ku; DNA end-binding protein Ku E sle_24310 sle_24310; Probable DNA repair protein SGR_2195 K10979 ku; DNA end-binding protein Ku E sle_66420 sle_66420; Probable DNA repair protein SACE_3550 K10979 ku; DNA end-binding protein Ku E sle_12820 sle_12820; Putative DNA ligase-like protein Rv0938/MT0965 K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] E sle_24320 sle_24320; Putative DNA ligase-like protein Rv0938/MT0965 K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] E sle_65450 sle_65450; Putative DNA ligase-like protein Rv0938/MT0965 K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F sle_18430 sle_18430; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F sle_35900 sle_35900; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F sle_18480 sle_18480; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F sle_35910 sle_35910; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F sle_32600 sle_32600; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F sle_21010 sle_21010; DNA-binding protein HU 2 K03530 hupB; DNA-binding protein HU-beta F sle_43240 sle_43240; DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F sle_47080 sle_47080; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O) F sle_33540 sle_33540; Recombination protein recR K06187 recR; recombination protein RecR F sle_21610 sle_21610; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F sle_06150 sle_06150; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F sle_18570 sle_18570; Probable ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F sle_30550 sle_30550; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F sle_06940 sle_06940; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A F sle_51830 sle_51830; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A F sle_51730 sle_51730; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D sle_57180 sle_57180; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D sle_19040 sle_19040; Protein RecA K03553 recA; recombination protein RecA D sle_18690 sle_18690; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D sle_53510 sle_53510; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N) D sle_53860 sle_53860; Error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D sle1_059 sle1_059; pZL12-1; highly conserved K03111 ssb; single-strand DNA-binding protein D sle_36240 sle_36240; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D sle_45470 sle_45470; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D sle_19030 sle_19030; Regulatory protein recX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D sle_18700 sle_18700; Probable ATP-dependent helicase dinG homolog K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D sle_19080 sle_19080; Probable ATP-dependent helicase lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] C Modulation of nucleotide pools D sle_23290 sle_23290; NUDIX Hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_26360 sle_26360; Putative mutator mutT2 protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_46010 sle_46010; NUDIX Hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_59160 sle_59160; NUDIX Hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D sle_53590 sle_53590; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D sle_18180 sle_18180; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D sle_18670 sle_18670; Vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D sle_25130 sle_25130; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D sle_25140 sle_25140; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 5, 2025