+E Ribosome biogenesis KO
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Ribosome Biogenesis - Staphylococcus lugdunensis N920143
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D SLUG_16700 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C SLUG_13440 era; putative GTP-binding protein K03595 era; GTPase
C SLUG_12740 obg; Spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C SLUG_16300 nusA; putative N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
C SLUG_13870 putative N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
C SLUG_22710 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D SLUG_11750 RNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SLUG_23150 ribosomal RNA adenine dimethylase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SLUG_16860 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SLUG_22660 conserved hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SLUG_17460 putative methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SLUG_13340 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SLUG_24370 gidB; putative glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SLUG_17210 MraW methylase family protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SLUG_23190 tetrapyrrole (corrin/porphyrin) methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
C 23S rRNA modification factors
D SLUG_22750 yacO; SpoU rRNA methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SLUG_00270 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SLUG_17900 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SLUG_16850 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SLUG_10690 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SLUG_14170 rluB; ribosomal large subunit pseudouridine synthaseB K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SLUG_11170 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SLUG_17040 putative RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SLUG_18550 putative RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C SLUG_10100 putative acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C SLUG_24180 putative acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
C SLUG_16600 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
C SLUG_13330 putative methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C SLUG_16700 putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C SLUG_13000 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C SLUG_22760 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C SLUG_09840 putative helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C SLUG_13530 putative helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C SLUG_13440 era; putative GTP-binding protein K03595 era; GTPase
C SLUG_16820 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C SLUG_14300 putative GTPase K03977 engA; GTPase
C SLUG_12740 obg; Spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
C SLUG_16550 putative GTPase protein K14540 rbgA; ribosome biogenesis GTPase A
C SLUG_15880 conserved hypothetical protein K03665 hflX; GTPase
C SLUG_13150 putative GTPase K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C SLUG_09510 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C SLUG_12840 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C SLUG_16260 rbfA; putative ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C SLUG_16310 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C SLUG_00030 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
C SLUG_13200 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
C SLUG_13410 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C SLUG_13170 conserved hypothetical protein K07574 yhbY; RNA-binding protein
C SLUG_20480 putative S30EA family ribosomal protein K05808 hpf; ribosome hibernation promoting factor
C SLUG_23920 putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
C SLUG_17430 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2025