+E Transcription factors KO
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Transcription Factors - Streptomyces longhuiensis
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D LGI35_40460 helix-turn-helix domain-containing protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D LGI35_34290 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D LGI35_34340 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LGI35_33585 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LGI35_40300 helix-turn-helix domain-containing protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D LGI35_23615 helix-turn-helix domain-containing protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D LGI35_00105 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D LGI35_28025 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D LGI35_06805 cynR; transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
C DeoR family
D LGI35_33440 DeoR/GlpR family DNA-binding transcription regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D LGI35_08510 DeoR/GlpR family DNA-binding transcription regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D LGI35_02415 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D LGI35_13090 DeoR/GlpR family DNA-binding transcription regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D LGI35_13410 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_15175 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_17695 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_17740 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_21995 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_35650 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_35700 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_38225 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_38725 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_41070 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_41680 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_42600 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_42635 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_02920 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_03665 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_04340 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_08610 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D LGI35_15060 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D LGI35_07175 LacI family DNA-binding transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
C GntR family
D LGI35_04805 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D LGI35_28920 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D LGI35_18635 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D LGI35_20595 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D LGI35_38635 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D LGI35_39185 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D LGI35_39355 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D LGI35_45750 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D LGI35_16190 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D LGI35_41765 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D LGI35_03340 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D LGI35_37740 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D LGI35_13560 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LGI35_27040 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D LGI35_09615 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D LGI35_38525 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D LGI35_01705 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D LGI35_16400 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LGI35_40655 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LGI35_08430 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D LGI35_11000 TetR/AcrR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D LGI35_15590 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D LGI35_13940 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D LGI35_07940 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D LGI35_30940 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D LGI35_10305 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LGI35_25720 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LGI35_27195 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LGI35_02515 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LGI35_03335 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D LGI35_09650 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D LGI35_33795 helix-turn-helix transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D LGI35_32390 LuxR C-terminal-related transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D LGI35_21815 MarR family winged helix-turn-helix transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D LGI35_29080 MarR family winged helix-turn-helix transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D LGI35_35210 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D LGI35_19340 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LGI35_44790 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D LGI35_00375 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D LGI35_11945 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D LGI35_24040 helix-turn-helix domain-containing protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D LGI35_25025 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D LGI35_42835 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D LGI35_16530 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LGI35_21905 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LGI35_28790 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D LGI35_40575 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
C IclR family
D LGI35_34030 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D LGI35_23740 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D LGI35_32730 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
C CRP/FNR family
D LGI35_24600 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D LGI35_26370 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
D LGI35_43275 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D LGI35_36470 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LGI35_36485 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D LGI35_42390 metalloregulator ArsR/SmtB family transcription factor K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
D LGI35_08185 metalloregulator ArsR/SmtB family transcription factor K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
D LGI35_31445 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
C Other families
D LGI35_21100 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D LGI35_27585 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LGI35_07060 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein
D LGI35_25510 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D LGI35_03985 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D LGI35_43735 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D LGI35_18030 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_19595 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_24555 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_26730 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_28095 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_28965 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_35260 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_00395 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_28675 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D LGI35_22100 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D LGI35_12430 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D LGI35_34245 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D LGI35_08465 PucR family transcriptional regulator ligand-binding domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D LGI35_23205 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LGI35_23745 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LGI35_21640 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D LGI35_11050 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D LGI35_16730 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D LGI35_32705 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D LGI35_34405 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D LGI35_36370 transcriptional regulator, PaaX family protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D LGI35_36380 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D LGI35_10580 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D LGI35_41565 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D LGI35_19130 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D LGI35_14275 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D LGI35_31970 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0