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  Transfer RNA Biogenesis - Saccharomycodes ludwigii

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AEukaryotic type B 5'processing factors C Ribonucrease P D SCDLUD_000462 hypothetical protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D SCDLUD_001588 hypothetical protein K14528 POP8; ribonuclease P/MRP protein subunit POP8 [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D SCDLUD_003141 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D SCDLUD_002112 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] C CCA adding factors D SCDLUD_001669 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex D SCDLUD_001729 hypothetical protein K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16] C tRNA splicing ligase complex C Other tRNA splicing factors D SCDLUD_002404 hypothetical protein K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160] D SCDLUD_003680 hypothetical protein K14679 TRL1; tRNA ligase [EC:6.5.1.3] B tRNA transport factors C tRNA export factors D SCDLUD_000875 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran D SCDLUD_000416 hypothetical protein K14288 XPOT; exportin-T D SCDLUD_004501 hypothetical protein K14290 XPO1; exportin-1 D SCDLUD_004559 hypothetical protein K14289 XPO5; exportin-5 D SCDLUD_000549 hypothetical protein K03231 EEF1A; elongation factor 1-alpha D SCDLUD_001169 hypothetical protein K03231 EEF1A; elongation factor 1-alpha C tRNA import factors D SCDLUD_003280 hypothetical protein K15436 TRPO3; transportin-3 B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D SCDLUD_002262 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCDLUD_000500 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCDLUD_003421 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SCDLUD_000207 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SCDLUD_000168 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SCDLUD_001953 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SCDLUD_004232 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCDLUD_002167 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCDLUD_004527 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SCDLUD_004737 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SCDLUD_000914 hypothetical protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D SCDLUD_004689 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SCDLUD_002818 hypothetical protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SCDLUD_003710 hypothetical protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SCDLUD_001427 hypothetical protein K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D SCDLUD_002056 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SCDLUD_001029 hypothetical protein K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 C Other AARSs D SCDLUD_000461 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SCDLUD_003406 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D SCDLUD_003459 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D SCDLUD_000547 hypothetical protein K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D SCDLUD_000307 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SCDLUD_004306 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SCDLUD_003610 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SCDLUD_004903 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SCDLUD_003927 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SCDLUD_002345 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SCDLUD_000120 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SCDLUD_000677 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SCDLUD_000776 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SCDLUD_000649 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SCDLUD_004472 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCDLUD_002048 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCDLUD_002578 hypothetical protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SCDLUD_003181 hypothetical protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D SCDLUD_002989 hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors B tRNA modification factors C Deaminases D SCDLUD_002265 hypothetical protein K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34] D SCDLUD_004662 hypothetical protein K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-] C Dihydorouridine synthases D SCDLUD_004357 hypothetical protein K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88] D SCDLUD_001208 hypothetical protein K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91] D SCDLUD_004269 hypothetical protein K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89] D SCDLUD_004276 hypothetical protein K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90] C Methylthiotransferase C Methyltransferases D SCDLUD_001710 hypothetical protein K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D SCDLUD_002620 hypothetical protein K15331 TRMT2B; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D SCDLUD_002711 hypothetical protein K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34] D SCDLUD_001597 hypothetical protein K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202] D SCDLUD_004657 hypothetical protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D SCDLUD_002435 hypothetical protein K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D SCDLUD_002797 hypothetical protein K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit D SCDLUD_003709 hypothetical protein K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205] D SCDLUD_001918 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D SCDLUD_003322 hypothetical protein K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229] D SCDLUD_005089 hypothetical protein K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221] D SCDLUD_004693 hypothetical protein K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214] D SCDLUD_001949 hypothetical protein K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211] D SCDLUD_001797 hypothetical protein K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 D SCDLUD_003771 hypothetical protein K15448 TRM112; multifunctional methyltransferase subunit TRM112 D SCDLUD_002146 hypothetical protein K17053 ABP140; tRNAThr (cytosine32-N3)-methyltransferase [EC:2.1.1.268] D SCDLUD_001107 hypothetical protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D SCDLUD_001555 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] C Psudouridine synthases D SCDLUD_001113 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D SCDLUD_000591 hypothetical protein K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45] D SCDLUD_005046 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D SCDLUD_004533 hypothetical protein K15453 PUS6; tRNA pseudouridine31 synthase [EC:5.4.99.42] D SCDLUD_002152 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D SCDLUD_005065 hypothetical protein K14655 RIB2; tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:5.4.99.28] C Thiolation factors D SCDLUD_002552 hypothetical protein K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14] D SCDLUD_002311 hypothetical protein K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-] D SCDLUD_003475 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D SCDLUD_005146 hypothetical protein K12161 URM1; ubiquitin related modifier 1 D SCDLUD_003201 hypothetical protein K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11] C KEOPS/EKC complex D SCDLUD_004738 hypothetical protein K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D SCDLUD_002690 hypothetical protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D SCDLUD_003643 hypothetical protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D SCDLUD_005306 hypothetical protein K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1 C Elongator complex D SCDLUD_004240 hypothetical protein K11373 ELP1; elongator complex protein 1 D SCDLUD_004683 hypothetical protein K11374 ELP2; elongator complex protein 2 D SCDLUD_002034 hypothetical protein K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D SCDLUD_004741 hypothetical protein K11376 ELP5; elongator complex protein 5 C Elongator related proteins D SCDLUD_000176 hypothetical protein K15455 DPH3; diphthamide biosynthesis protein 3 D SCDLUD_004076 hypothetical protein K15456 KTI12; protein KTI12 D SCDLUD_001103 hypothetical protein K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1] D SCDLUD_005132 hypothetical protein K15427 SIT4; serine/threonine-protein phosphatase PP1-1 [EC:3.1.3.16] D SCDLUD_002284 hypothetical protein K15457 SAP155; SIT4-associating protein SAP155 C Other tRNA modification factors D SCDLUD_000620 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SCDLUD_002211 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SCDLUD_004178 hypothetical protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D SCDLUD_002271 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SCDLUD_001260 hypothetical protein K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-] D SCDLUD_002278 hypothetical protein K06963 TAN1; tRNA acetyltransferase TAN1 D SCDLUD_000628 hypothetical protein K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79] D SCDLUD_001486 hypothetical protein K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8] B tRNA degradation factors C TRAMP complex D SCDLUD_005038 hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] D SCDLUD_003572 hypothetical protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C Rapid tRNA decay (RTD) pathway factors D SCDLUD_001404 hypothetical protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D SCDLUD_003169 hypothetical protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D SCDLUD_000860 hypothetical protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D SCDLUD_003141 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11] D SCDLUD_002112 hypothetical protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] C CCA adding factors D SCDLUD_001669 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors B tRNA transport factors C tRNA export factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D SCDLUD_004232 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCDLUD_002167 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D SCDLUD_003421 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D SCDLUD_000207 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D SCDLUD_004472 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCDLUD_002048 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D SCDLUD_002578 hypothetical protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SCDLUD_003181 hypothetical protein K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D SCDLUD_000307 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SCDLUD_004306 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D SCDLUD_000168 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SCDLUD_001953 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D SCDLUD_002818 hypothetical protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SCDLUD_003710 hypothetical protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D SCDLUD_000461 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D SCDLUD_002345 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D SCDLUD_004527 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SCDLUD_004737 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D SCDLUD_003610 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SCDLUD_004903 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D SCDLUD_002056 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D SCDLUD_003927 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D SCDLUD_002262 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCDLUD_000500 hypothetical protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D SCDLUD_000914 hypothetical protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D SCDLUD_004689 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D SCDLUD_000677 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SCDLUD_000776 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D SCDLUD_000649 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D SCDLUD_000120 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D SCDLUD_003406 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D SCDLUD_003459 hypothetical protein K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] C Trans-editing factors D SCDLUD_002989 hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferases C Methyltransferases D SCDLUD_001918 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D SCDLUD_004178 hypothetical protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] C Psudouridine synthases D SCDLUD_001113 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D SCDLUD_005046 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D SCDLUD_002152 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D SCDLUD_003475 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex D SCDLUD_004738 hypothetical protein K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D SCDLUD_002690 hypothetical protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D SCDLUD_003643 hypothetical protein K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] C Other tRNA modification factors D SCDLUD_002271 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D SCDLUD_002211 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D SCDLUD_000620 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D SCDLUD_003125 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase B tRNA degradation factors ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024