+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Streptococcus mitis

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D smi_1210 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C smi_0970 era; GTPase/GTP-binding protein Era K03595 era; GTPase C smi_0998 obg; GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C smi_0376 nusA; transcription termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA C smi_1671 nusB; transcription termination factor nusB K03625 nusB; transcription antitermination protein NusB C smi_0238 transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D smi_0267 rsuA1; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D smi_1454 rsuA3; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D smi_0295 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D smi_1624 rRNA-specific 5-methylcytidine transferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D smi_0888 16S RNA G1207 methylase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D smi_0314 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D smi_0564 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D smi_1243 gidB; methyltransferase GidB (glucose inhibited division protein B) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D smi_1769 mraW; S-adenosyl-methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D smi_0941 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D smi_1017 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D smi_0136 rrmA; 23S rRNA m1G745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D smi_1378 trmH; tRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D smi_2087 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D smi_0754 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D smi_0819 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D smi_1017 conserved hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D smi_1119 conserved hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D smi_0339 rsuA2; ribosomal small subunit pseudouridine synthase A K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D smi_1180 rluA3; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D smi_0233 rluA1; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D smi_0932 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C smi_1952 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C smi_0829 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C smi_0563 ribosomal protein methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C smi_1210 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C smi_1919 holiday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C smi_1594 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C smi_0685 exp9; superfamily II DNA and RNA helicases ATP-dependent RNA helicase, DEAD-box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C smi_1402 rheB; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C smi_0970 era; GTPase/GTP-binding protein Era K03595 era; GTPase C smi_0296 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C smi_0586 engA; phosphoglycerate dehydrogenase-related protein, GTP-binding protein K03977 engA; GTPase C smi_0998 obg; GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-] C smi_1063 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A C smi_1474 conserved hypothetical protein K03665 hflX; GTPase C smi_1639 conserved hypothetical protein K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C smi_1125 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C smi_0642 relA; GTP pyrophosphokinase, stringent response protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C smi_0380 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C smi_0375 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP C smi_2073 conserved hypothetical protein K14761 rlbA; ribosome-associated protein C smi_1634 conserved hypothetical protein K09710 ybeB; ribosome-associated protein C smi_0968 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor C smi_1638 conserved hypothetical protein K07574 yhbY; RNA-binding protein C smi_2056 ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor C smi_0004 GTP-binding protein K06942 ychF; ribosome-binding ATPase C smi_1238 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024