+D GENES KO
#
KEGG Orthology (KO) - Sulfuracidifex metallicus
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:smet00010]
D RQ359_001695 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D RQ359_002154 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RQ359_000061 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D RQ359_001490 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RQ359_000846 phosphorylating glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D RQ359_000847 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RQ359_001649 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RQ359_000424 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RQ359_000818 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RQ359_000496 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RQ359_000792 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RQ359_002214 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RQ359_002215 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RQ359_002194 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RQ359_000286 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RQ359_001492 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_002109 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90]
C 00020 Citrate cycle (TCA cycle) [PATH:smet00020]
D RQ359_000332 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RQ359_002010 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RQ359_001019 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RQ359_001559 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002214 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RQ359_002215 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RQ359_001815 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RQ359_001814 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RQ359_001724 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RQ359_001725 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RQ359_001726 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RQ359_001727 succinate dehydrogenase K18859 sdhD; succinate dehydrogenase subunit D
D RQ359_001290 lyase family protein K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RQ359_002014 lactate/malate dehydrogenase family protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:smet00030]
D RQ359_001695 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D RQ359_000382 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RQ359_000383 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RQ359_000058 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RQ359_002366 orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D RQ359_002324 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D RQ359_001426 carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D RQ359_002183 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_000975 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RQ359_002107 dihydrodipicolinate synthase family protein K11395 kdpgA; 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase [EC:4.1.2.55]
D RQ359_002109 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K18978 gapN; glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] [EC:1.2.1.90]
D RQ359_001431 glucose 1-dehydrogenase K18125 ssgdh; aldose 1-dehydrogenase [NAD(P)+] [EC:1.1.1.359]
D RQ359_002106 mandelate racemase/muconate lactonizing enzyme family protein K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140]
D RQ359_002108 kdgK; bifunctional 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase K18126 sskdgK; 2-dehydro-3-deoxygluconokinase / 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.178]
D RQ359_001124 cutA; glyceraldehyde dehydrogenase subunit alpha K18020 cutA; glyceraldehyde dehydrogenase large subunit [EC:1.2.99.8]
D RQ359_001122 cutB; glyceraldehyde dehydrogenase subunit beta K18021 cutB; glyceraldehyde dehydrogenase medium subunit [EC:1.2.99.8]
D RQ359_001123 (2Fe-2S)-binding protein K18022 cutC; glyceraldehyde dehydrogenase small subunit [EC:1.2.99.8]
D RQ359_000526 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RQ359_002154 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RQ359_000061 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:smet00040]
D RQ359_002053 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RQ359_002054 sugar phosphate nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RQ359_001386 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RQ359_002165 zinc-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:smet00051]
D RQ359_001695 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_000356 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RQ359_001386 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RQ359_002165 zinc-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D RQ359_002154 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RQ359_000061 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D RQ359_001490 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:smet00052]
D RQ359_001492 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D RQ359_000638 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RQ359_002054 sugar phosphate nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_001270 glycoside hydrolase family 1 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D RQ359_001431 glucose 1-dehydrogenase K18125 ssgdh; aldose 1-dehydrogenase [NAD(P)+] [EC:1.1.1.359]
D RQ359_002106 mandelate racemase/muconate lactonizing enzyme family protein K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140]
D RQ359_002107 dihydrodipicolinate synthase family protein K11395 kdpgA; 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase [EC:4.1.2.55]
D RQ359_002108 kdgK; bifunctional 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase K18126 sskdgK; 2-dehydro-3-deoxygluconokinase / 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.178]
D RQ359_001625 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D RQ359_002053 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:smet00500]
D RQ359_001625 glycoside hydrolase family 31 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RQ359_002054 sugar phosphate nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RQ359_000491 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RQ359_000490 glycoside hydrolase family 57 protein K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D RQ359_001898 hypothetical protein K01178 SGA1; glucoamylase [EC:3.2.1.3]
D RQ359_001300 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D RQ359_001301 alpha-amylase family glycosyl hydrolase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D RQ359_000001 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_001695 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:smet00520]
D RQ359_000454 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RQ359_000105 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D RQ359_002052 GDP-mannose 4,6-dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_002054 sugar phosphate nucleotidyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RQ359_002053 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RQ359_001400 agl3; UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RQ359_000638 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RQ359_001695 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D RQ359_000356 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:smet00620]
D RQ359_002194 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RQ359_002214 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RQ359_002215 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000496 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RQ359_000794 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RQ359_000286 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RQ359_000015 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RQ359_002014 lactate/malate dehydrogenase family protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RQ359_001290 lyase family protein K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RQ359_001670 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RQ359_000792 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_000719 lysS; homocitrate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RQ359_001771 isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RQ359_002304 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:smet00630]
D RQ359_002194 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RQ359_002014 lactate/malate dehydrogenase family protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RQ359_000332 citrate synthase/methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RQ359_002010 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RQ359_001019 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001788 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RQ359_001280 biotin carboxylase N-terminal domain-containing protein K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3]
D RQ359_001281 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D RQ359_001279 biotin/lipoyl-binding protein K15037 K15037; biotin carboxyl carrier protein
D RQ359_001677 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RQ359_001787 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RQ359_000292 FAD-binding oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RQ359_002217 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RQ359_002273 phosphoglycolate phosphatase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18]
D RQ359_000684 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001833 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001872 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_000844 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RQ359_000822 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RQ359_000821 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RQ359_000823 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000824 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RQ359_001027 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D RQ359_001319 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D RQ359_000526 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:smet00640]
D RQ359_002194 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RQ359_000286 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RQ359_002310 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RQ359_001280 biotin carboxylase N-terminal domain-containing protein K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3]
D RQ359_001281 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D RQ359_001279 biotin/lipoyl-binding protein K15037 K15037; biotin carboxyl carrier protein
D RQ359_001788 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RQ359_001677 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RQ359_001787 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RQ359_001814 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RQ359_001815 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RQ359_002013 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D RQ359_002012 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:smet00650]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_002310 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RQ359_000991 CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D RQ359_000990 CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D RQ359_000502 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D RQ359_001724 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RQ359_001725 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RQ359_001726 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RQ359_001727 succinate dehydrogenase K18859 sdhD; succinate dehydrogenase subunit D
D RQ359_001001 4-hydroxyphenylacetate 3-hydroxylase family protein K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RQ359_002214 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RQ359_002215 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RQ359_000840 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D RQ359_000612 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RQ359_002069 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:smet00660]
D RQ359_000612 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RQ359_002069 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RQ359_001814 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RQ359_001815 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RQ359_001817 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RQ359_001818 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RQ359_000125 isocitrate/isopropylmalate family dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:smet00562]
D RQ359_001781 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RQ359_000371 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RQ359_000793 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RQ359_001490 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:smet00190]
D RQ359_000362 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RQ359_000527 nuoB; NADH-quinone oxidoreductase subunit NuoB K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RQ359_000363 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RQ359_000364 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RQ359_000365 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RQ359_000366 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RQ359_000367 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RQ359_000368 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RQ359_000369 proton-conducting transporter membrane subunit K15863 nuoLM; NADH-quinone oxidoreductase subunit L/M [EC:7.1.1.2]
D RQ359_000370 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RQ359_001826 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RQ359_001724 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RQ359_001725 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RQ359_001726 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RQ359_001727 succinate dehydrogenase K18859 sdhD; succinate dehydrogenase subunit D
D RQ359_000538 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RQ359_002079 hypothetical protein K24007 soxD; cytochrome aa3-type oxidase subunit SoxD
D RQ359_002083 soxC; proton pump complex cytochrome B SoxC K24008 soxC; cytochrome aa3-type oxidase subunit III
D RQ359_002082 soxB; proton pump complex quinol oxidase subunit SoxB K24009 soxB; cytochrome aa3-type oxidase subunit I [EC:7.1.1.4]
D RQ359_002081 soxA; proton pump complex quinol oxidase subunit SoxA K24010 soxA; cytochrome aa3-type oxidase subunit II [EC:7.1.1.4]
D RQ359_002120 soxA; proton pump complex quinol oxidase subunit SoxA K24010 soxA; cytochrome aa3-type oxidase subunit II [EC:7.1.1.4]
D RQ359_001169 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RQ359_000625 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RQ359_000624 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RQ359_000623 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RQ359_000626 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D RQ359_000627 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D RQ359_000628 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RQ359_000621 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RQ359_001297 plasma-membrane proton-efflux P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D RQ359_001755 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:smet00710]
D RQ359_000847 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RQ359_000846 phosphorylating glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D RQ359_002154 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RQ359_000382 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RQ359_000383 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RQ359_000058 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RQ359_001490 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RQ359_001670 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RQ359_002014 lactate/malate dehydrogenase family protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:smet00720]
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RQ359_000792 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RQ359_001670 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RQ359_002014 lactate/malate dehydrogenase family protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RQ359_001290 lyase family protein K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RQ359_001724 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RQ359_001725 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RQ359_001726 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RQ359_001727 succinate dehydrogenase K18859 sdhD; succinate dehydrogenase subunit D
D RQ359_001815 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RQ359_001814 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RQ359_000463 zinc-binding dehydrogenase K14465 K14465; succinate semialdehyde reductase (NADPH) [EC:1.1.1.-]
D RQ359_000992 AMP-binding protein K14467 4hbl; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40]
D RQ359_000462 phenylacetate--CoA ligase family protein K18861 K18861; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40]
D RQ359_001001 4-hydroxyphenylacetate 3-hydroxylase family protein K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
D RQ359_001617 3-hydroxyacyl-CoA dehydrogenase K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_002214 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RQ359_002215 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RQ359_001559 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RQ359_001019 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RQ359_001280 biotin carboxylase N-terminal domain-containing protein K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3]
D RQ359_001281 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D RQ359_001279 biotin/lipoyl-binding protein K15037 K15037; biotin carboxyl carrier protein
D RQ359_001521 asd; aspartate-semialdehyde dehydrogenase K15017 K15017; malonyl-CoA/succinyl-CoA reductase (NADPH) [EC:1.2.1.75 1.2.1.76]
D RQ359_000547 3-hydroxyacyl-CoA dehydrogenase family protein K15039 K15039; 3-hydroxypropionate dehydrogenase (NADP+) [EC:1.1.1.298]
D RQ359_001430 acs; acetate--CoA ligase K15018 K15018; 3-hydroxypropionyl-coenzyme A synthetase [EC:6.2.1.36]
D RQ359_000540 enoyl-CoA hydratase/isomerase family protein K15019 K15019; 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116]
D RQ359_000671 acryloyl-coenzyme A reductase K15020 K15020; acryloyl-coenzyme A reductase [EC:1.3.1.84]
D RQ359_001788 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RQ359_001787 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RQ359_001677 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RQ359_002194 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:smet00680]
D RQ359_000844 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RQ359_000526 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RQ359_000818 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RQ359_001670 ppcA; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RQ359_002014 lactate/malate dehydrogenase family protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RQ359_002154 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RQ359_000061 fbp; fructose-1,6-bisphosphate aldolase/phosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D RQ359_002324 hxlB; 6-phospho-3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D RQ359_002366 orotidine 5'-phosphate decarboxylase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D RQ359_001051 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RQ359_001050 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RQ359_001054 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RQ359_001049 4Fe-4S dicluster domain-containing protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RQ359_001053 4Fe-4S dicluster domain-containing protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RQ359_002194 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D RQ359_000792 ppsA; pyruvate, water dikinase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RQ359_001649 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RQ359_000424 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RQ359_000811 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:smet00910]
D RQ359_001971 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RQ359_001972 molybdopterin oxidoreductase family protein K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D RQ359_001969 hypothetical protein K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D RQ359_001691 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RQ359_000684 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001833 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001872 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_000894 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:smet00920]
D RQ359_001610 FAD/NAD(P)-binding oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RQ359_001644 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RQ359_001673 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RQ359_001553 sulfur oxygenase reductase family protein K16952 sor; sulfur oxygenase/reductase [EC:1.13.11.55]
D RQ359_001597 TQO small subunit DoxA domain-containing protein K16936 doxA; thiosulfate dehydrogenase (quinone) small subunit [EC:1.8.5.2]
D RQ359_001596 doxD; thiosulfate:quinone oxidoreductase large subunit K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D RQ359_001994 TQO small subunit DoxD K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D RQ359_001737 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:smet00061]
D RQ359_000723 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001055 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001688 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_000681 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:smet00071]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_002310 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RQ359_000681 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:smet00561]
D RQ359_000526 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RQ359_001400 agl3; UDP-sulfoquinovose synthase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:smet00564]
D RQ359_001275 heterodisulfide reductase-related iron-sulfur binding cluster K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D RQ359_001451 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RQ359_000086 NAD(P)-dependent glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D RQ359_000055 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41]
D RQ359_000608 UbiA family prenyltransferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D RQ359_000646 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67]
D RQ359_001719 digeranylgeranylglycerophospholipid reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D RQ359_001270 glycoside hydrolase family 1 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:smet00230]
D RQ359_001507 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_000975 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RQ359_000558 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RQ359_000559 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RQ359_000557 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RQ359_000560 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RQ359_000562 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RQ359_000561 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RQ359_000556 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RQ359_001322 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RQ359_001321 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RQ359_000563 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RQ359_000028 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RQ359_000029 formate--phosphoribosylaminoimidazolecarboxamide ligase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D RQ359_000030 formate--phosphoribosylaminoimidazolecarboxamide ligase family protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D RQ359_000017 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RQ359_001643 inosine/xanthosine triphosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D RQ359_000412 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RQ359_001853 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RQ359_002161 ATP-binding protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RQ359_000769 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RQ359_001059 hypothetical protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RQ359_000876 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RQ359_000040 cyaB; class IV adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D RQ359_000031 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RQ359_000152 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RQ359_000304 adenylate kinase family protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D RQ359_000036 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D RQ359_001952 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RQ359_001951 urease subunit gamma K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:smet00240]
D RQ359_000550 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RQ359_000551 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RQ359_000576 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RQ359_000577 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RQ359_000579 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RQ359_000580 pyrD; dihydroorotate dehydrogenase PyrD K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D RQ359_000575 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RQ359_000574 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RQ359_000721 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RQ359_000017 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RQ359_002365 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RQ359_000155 AAA family ATPase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RQ359_000020 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RQ359_000478 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_001865 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_001867 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_001897 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_002354 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RQ359_000769 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RQ359_001059 hypothetical protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RQ359_000649 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RQ359_000878 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RQ359_000879 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RQ359_000361 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RQ359_001903 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RQ359_001868 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001886 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001904 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001870 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RQ359_001902 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RQ359_001907 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:smet00250]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_001262 FAD-dependent oxidoreductase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RQ359_001716 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RQ359_002211 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D RQ359_000553 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RQ359_000552 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RQ359_000031 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RQ359_000028 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RQ359_000576 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RQ359_000577 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D RQ359_001691 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RQ359_000684 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001833 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001872 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_000550 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RQ359_000551 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RQ359_000561 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RQ359_000454 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RQ359_000558 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RQ359_000559 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:smet00260]
D RQ359_000787 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RQ359_000786 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RQ359_000537 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RQ359_001736 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D RQ359_000788 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RQ359_000918 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D RQ359_000844 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RQ359_000526 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RQ359_001649 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RQ359_000424 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RQ359_000811 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RQ359_000822 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RQ359_000821 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RQ359_000823 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000824 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RQ359_001027 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D RQ359_001319 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D RQ359_000035 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RQ359_000796 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RQ359_000795 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RQ359_001072 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:smet00270]
D RQ359_000433 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RQ359_000434 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RQ359_002362 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RQ359_000604 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RQ359_001474 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RQ359_000094 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RQ359_000256 purine-nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RQ359_001709 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RQ359_001805 purine-nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RQ359_000081 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RQ359_000084 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RQ359_000787 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RQ359_000786 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RQ359_000537 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RQ359_001737 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_002014 lactate/malate dehydrogenase family protein K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RQ359_000811 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:smet00280]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000910 pyruvate ferredoxin oxidoreductase K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7]
D RQ359_002310 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D RQ359_001280 biotin carboxylase N-terminal domain-containing protein K01964 K01964; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3]
D RQ359_001281 acyl-CoA carboxylase subunit beta K15036 K15036; acetyl-CoA/propionyl-CoA carboxylase [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D RQ359_001279 biotin/lipoyl-binding protein K15037 K15037; biotin carboxyl carrier protein
D RQ359_001788 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RQ359_001677 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D RQ359_001787 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D RQ359_000724 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RQ359_002067 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_000840 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:smet00290]
D RQ359_000035 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RQ359_001817 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RQ359_001818 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RQ359_000125 isocitrate/isopropylmalate family dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RQ359_000612 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RQ359_002069 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RQ359_000614 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RQ359_001519 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RQ359_000719 lysS; homocitrate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RQ359_001771 isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RQ359_002304 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:smet00300]
D RQ359_000537 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RQ359_000787 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RQ359_000786 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RQ359_001681 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RQ359_001981 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RQ359_002087 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RQ359_001895 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RQ359_002283 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D RQ359_002318 lysW_argW; alpha-aminoadipate/glutamate carrier protein LysW/ArgW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D RQ359_002317 lysX; lysine biosynthesis protein LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D RQ359_002320 [LysW]-aminoadipate/[LysW]-glutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D RQ359_002321 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D RQ359_002315 N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00310 Lysine degradation [PATH:smet00310]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:smet00220]
D RQ359_000783 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RQ359_000553 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RQ359_000552 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RQ359_001952 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RQ359_001951 urease subunit gamma K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D RQ359_001912 arginine deiminase family protein K01478 arcA; arginine deiminase [EC:3.5.3.6]
D RQ359_000561 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RQ359_000684 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001833 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001872 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_000550 carB; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RQ359_000551 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RQ359_001691 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_002318 lysW_argW; alpha-aminoadipate/glutamate carrier protein LysW/ArgW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D RQ359_000549 lysX; lysine biosynthesis protein LysX K19412 argX; glutamate---[amino group carrier protein] ligase [EC:6.3.2.60]
D RQ359_002320 [LysW]-aminoadipate/[LysW]-glutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D RQ359_002321 argC; N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D RQ359_002315 N-acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:smet00330]
D RQ359_001883 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D RQ359_000478 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_001865 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_001867 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_001897 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RQ359_001132 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D RQ359_001131 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D RQ359_000399 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RQ359_001961 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RQ359_000094 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RQ359_000604 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RQ359_001474 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RQ359_001076 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:smet00340]
D RQ359_000597 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RQ359_000592 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RQ359_000590 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RQ359_000596 hisA; 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RQ359_000591 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RQ359_000594 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RQ359_000265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_000598 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_000593 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:smet00350]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_000265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_000598 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:smet00360]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_000265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_000598 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:smet00380]
D RQ359_001970 amidohydrolase family protein K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smet00400]
D RQ359_000380 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RQ359_000379 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RQ359_000374 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D RQ359_000376 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RQ359_000375 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RQ359_000377 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RQ359_000799 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RQ359_000800 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RQ359_000797 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RQ359_000801 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RQ359_000796 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RQ359_000795 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RQ359_001072 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RQ359_000381 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D RQ359_000034 prephenate dehydratase domain-containing protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_000265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_000598 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:smet00410]
D RQ359_001875 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D RQ359_001762 4-phosphopantoate--beta-alanine ligase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D RQ359_001903 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RQ359_001868 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001886 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001904 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001870 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RQ359_001902 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RQ359_001907 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RQ359_002310 acyl-CoA dehydrogenase family protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:smet00430]
D RQ359_002148 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RQ359_001875 aspartate aminotransferase family protein K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:smet00450]
D RQ359_001737 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D RQ359_000433 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RQ359_000434 hypothetical protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RQ359_001626 aminotransferase class V-fold PLP-dependent enzyme K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RQ359_001780 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RQ359_000629 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:smet00460]
D RQ359_002148 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RQ359_001716 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RQ359_000844 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
D RQ359_000561 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
C 00480 Glutathione metabolism [PATH:smet00480]
D RQ359_002148 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RQ359_001559 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RQ359_000094 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:smet00511]
D RQ359_001270 glycoside hydrolase family 1 protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis [PATH:smet00552]
D RQ359_000309 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:smet00730]
D RQ359_000349 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RQ359_001758 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D RQ359_000407 sulfide-dependent adenosine diphosphate thiazole synthase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D RQ359_002225 thiamine-phosphate synthase family protein K21220 thiN; thiamine-phosphate diphosphorylase [EC:2.5.1.3]
D RQ359_000026 AIR synthase related protein K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RQ359_000152 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RQ359_001537 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:smet00740]
D RQ359_000442 GTP cyclohydrolase IIa K08096 gch3; GTP cyclohydrolase IIa [EC:3.5.4.29]
D RQ359_000024 dihydrofolate reductase family protein K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D RQ359_000439 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D RQ359_000441 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RQ359_000440 ribC; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RQ359_000747 CTP-dependent riboflavin kinase K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D RQ359_000748 cytidylyltransferase family protein K14656 ribL; FAD synthetase [EC:2.7.7.2]
D RQ359_001816 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D RQ359_001507 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RQ359_000406 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:smet00750]
D RQ359_000788 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RQ359_000918 pyridoxal-phosphate dependent enzyme K01733 thrC; threonine synthase [EC:4.2.3.1]
D RQ359_000618 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D RQ359_000617 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:smet00760]
D RQ359_001262 FAD-dependent oxidoreductase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RQ359_001495 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RQ359_001854 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RQ359_000697 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RQ359_000042 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D RQ359_001512 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RQ359_000919 cobB; NAD-dependent protein deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RQ359_001628 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RQ359_000502 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:smet00770]
D RQ359_000612 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RQ359_002069 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RQ359_000614 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RQ359_001519 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RQ359_001763 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RQ359_001761 GHMP kinase K06982 pok; pantoate kinase [EC:2.7.1.169]
D RQ359_001762 4-phosphopantoate--beta-alanine ligase K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D RQ359_002372 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RQ359_000425 GTP-dependent dephospho-CoA kinase family protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237]
D RQ359_001903 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RQ359_001868 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001886 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001904 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001870 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RQ359_001902 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D RQ359_001907 M20 family metallo-hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00780 Biotin metabolism [PATH:smet00780]
D RQ359_000723 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001055 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001688 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_000529 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:smet00785]
D RQ359_001037 radical SAM protein K09711 lipS1; lipoyl synthase
D RQ359_001331 radical SAM protein K09711 lipS1; lipoyl synthase
D RQ359_001038 radical SAM protein K24689 lipS2; lipoyl synthase
D RQ359_001330 radical SAM protein K24689 lipS2; lipoyl synthase
D RQ359_001036 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RQ359_001318 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RQ359_001332 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_000822 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D RQ359_000821 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D RQ359_000823 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RQ359_000824 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D RQ359_001027 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D RQ359_001319 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:smet00790]
D RQ359_000686 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RQ359_001555 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RQ359_000566 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RQ359_000246 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RQ359_001029 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RQ359_002197 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RQ359_001772 DUF115 domain-containing protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RQ359_000680 beta-ribofuranosylaminobenzene 5'-phosphate synthase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D RQ359_001128 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D RQ359_001712 RimK family alpha-L-glutamate ligase K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D RQ359_000688 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RQ359_000665 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RQ359_001759 MoaD family protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D RQ359_002201 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RQ359_000517 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RQ359_001794 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RQ359_000516 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:smet00670]
D RQ359_000844 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RQ359_000823 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RQ359_000361 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RQ359_001005 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:smet00860]
D RQ359_002272 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RQ359_002345 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RQ359_001957 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RQ359_002347 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RQ359_002346 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RQ359_002348 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RQ359_002349 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RQ359_001797 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RQ359_002344 NAD(P)-dependent oxidoreductase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D RQ359_002057 radical SAM protein K22226 ahbC; Fe-coproporphyrin III synthase
D RQ359_002058 SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D RQ359_000538 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RQ359_000431 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RQ359_000314 cobalt-factor II C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RQ359_000317 precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RQ359_000313 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RQ359_000312 cbiG; cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RQ359_002307 hypothetical protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RQ359_000316 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D RQ359_000315 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D RQ359_000311 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D RQ359_000318 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RQ359_000436 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RQ359_000601 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RQ359_000673 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RQ359_002162 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RQ359_002164 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RQ359_001368 adenosylcobinamide amidohydrolase K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D RQ359_002227 NTP transferase domain-containing protein K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62]
D RQ359_002163 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:smet00130]
D RQ359_002303 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RQ359_000789 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RQ359_000406 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RQ359_001905 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:smet00900]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_000840 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D RQ359_000843 hmgA; hydroxymethylglutaryl-CoA reductase (NADPH) K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D RQ359_000461 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D RQ359_001835 GHMP kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D RQ359_001834 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D RQ359_002246 isopentenyl phosphate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D RQ359_000406 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RQ359_002245 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RQ359_002244 gds; geranylgeranyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RQ359_001711 gdS-2; hexaprenyl pyrophosphate synthase K21268 gdS-2; hexaprenyl diphosphate synthase [EC:2.5.1.82]
D RQ359_002314 uppS; polyprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:smet00906]
D RQ359_002025 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RQ359_002027 NAD(P)/FAD-dependent oxidoreductase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RQ359_002026 porin K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RQ359_000382 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RQ359_000383 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:smet00523]
D RQ359_000455 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RQ359_002046 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RQ359_000105 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D RQ359_001560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RQ359_000268 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RQ359_000269 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RQ359_001499 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D RQ359_001560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:smet00261]
D RQ359_000787 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RQ359_000786 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RQ359_001681 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:smet00521]
D RQ359_002370 glmM; phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RQ359_000371 L-myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RQ359_000793 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D RQ359_001781 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RQ359_000455 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RQ359_002046 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RQ359_000105 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D RQ359_001560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RQ359_000268 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RQ359_000269 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RQ359_001499 sugar nucleotide-binding protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:smet00525]
D RQ359_000455 NDP-sugar synthase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RQ359_002046 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RQ359_000105 spn; bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D RQ359_001560 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:smet00401]
D RQ359_000381 chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_000265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_000598 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RQ359_000799 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RQ359_000800 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RQ359_000723 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001055 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001688 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites
D RQ359_002362 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:smet00627]
D RQ359_000794 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D RQ359_001979 thiamine pyrophosphate-binding protein K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D RQ359_000406 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D RQ359_001500 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D RQ359_001500 HAD-IA family hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D RQ359_000909 3-methyl-2-oxobutanoate dehydrogenase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D RQ359_000912 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D RQ359_000911 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D RQ359_000991 CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D RQ359_000990 CoA-transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation
D RQ359_001952 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RQ359_001951 urease subunit gamma K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:smet03020]
D RQ359_000013 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D RQ359_000012 rpoA1; DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D RQ359_000011 rpoA2; DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D RQ359_002254 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D RQ359_000391 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D RQ359_000427 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D RQ359_000071 DNA-directed RNA polymerase subunit G K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
D RQ359_000014 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D RQ359_000813 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D RQ359_002250 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D RQ359_000398 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D RQ359_000445 RNA polymerase Rpo13 K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
C 03022 Basal transcription factors [PATH:smet03022]
D RQ359_000396 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D RQ359_000757 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB
D RQ359_000751 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D RQ359_000080 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D RQ359_000351 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:smet03010]
D RQ359_002249 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RQ359_000134 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RQ359_002256 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RQ359_000148 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RQ359_000006 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RQ359_000143 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RQ359_002251 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RQ359_000004 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RQ359_002255 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RQ359_000008 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RQ359_002257 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RQ359_000142 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RQ359_000432 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RQ359_000137 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RQ359_000132 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RQ359_000104 30S ribosomal protein S3ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D RQ359_000140 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e
D RQ359_000430 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e
D RQ359_002313 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e
D RQ359_000062 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e
D RQ359_000698 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e
D RQ359_000408 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e
D RQ359_000420 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e
D RQ359_000619 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e
D RQ359_000981 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e
D RQ359_000409 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D RQ359_000019 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e
D RQ359_000764 30S ribosomal protein S30e K02983 RP-S30e; small subunit ribosomal protein S30e
D RQ359_000709 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RQ359_000131 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RQ359_000128 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RQ359_000141 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RQ359_000144 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RQ359_000710 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RQ359_000708 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RQ359_000711 rpl12p; 50S ribosomal protein P1 K02869 RP-L12; large subunit ribosomal protein L12
D RQ359_002252 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RQ359_000138 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RQ359_000150 uL15 family ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15
D RQ359_000147 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RQ359_000133 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RQ359_000130 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RQ359_000139 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RQ359_000135 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RQ359_000149 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RQ359_000129 rpl4p; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e
D RQ359_002271 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D RQ359_000388 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e
D RQ359_001831 ribosomal protein L13e K02873 RP-L13e; large subunit ribosomal protein L13e
D RQ359_000448 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e
D RQ359_000107 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e
D RQ359_002253 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e
D RQ359_000146 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e
D RQ359_000098 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e
D RQ359_000018 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e
D RQ359_000010 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e
D RQ359_000701 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e
D RQ359_000145 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e
D RQ359_000154 50S ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e
D RQ359_000093 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e
D RQ359_000116 50S ribosomal protein L37ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D RQ359_000700 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e
D RQ359_002334 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D RQ359_000980 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e
D RQ359_000703 rpl18a; 50S ribosomal protein L18Ae K02944 RP-LX; large subunit ribosomal protein LX
D RQ359_000898 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:smet00970]
D RQ359_002272 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RQ359_000670 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RQ359_000745 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RQ359_000021 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RQ359_000744 gatC; Asp-tRNA(Asn) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RQ359_000765 gatD; Glu-tRNA(Gln) amidotransferase subunit GatD K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D RQ359_000766 gatE; Glu-tRNA(Gln) amidotransferase subunit GatE K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D RQ359_000712 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RQ359_000996 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RQ359_002336 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RQ359_000400 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RQ359_001811 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RQ359_000588 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RQ359_001694 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RQ359_000629 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RQ359_000803 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RQ359_000289 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_000600 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_002269 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RQ359_000771 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RQ359_000620 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RQ359_000069 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RQ359_002280 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RQ359_002281 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RQ359_002261 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:smet03060]
D RQ359_000151 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RQ359_000726 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RQ359_000705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RQ359_002312 signal recognition particle subunit SRP19/SEC65 family protein K03105 SRP19; signal recognition particle subunit SRP19
D RQ359_000474 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RQ359_000475 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RQ359_000476 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D RQ359_000820 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:smet04122]
D RQ359_002001 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RQ359_002110 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RQ359_000688 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RQ359_001759 MoaD family protein K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D RQ359_000384 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RQ359_000665 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RQ359_002201 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RQ359_000493 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:smet03050]
D RQ359_000076 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit
D RQ359_000111 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D RQ359_000070 psmB; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D RQ359_000669 psmB; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:smet03018]
D RQ359_000390 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4
D RQ359_000113 rrp4; exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4
D RQ359_000115 rrp42; exosome complex protein Rrp42 K12589 RRP42; exosome complex component RRP42
D RQ359_000114 rrp41; exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41
D RQ359_000818 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:smet03030]
D RQ359_002262 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D RQ359_002074 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RQ359_001749 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RQ359_000338 DNA polymerase domain-containing protein K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D RQ359_000635 DNA-directed DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D RQ359_002263 3'-5' exonuclease K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D RQ359_000660 minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D RQ359_000978 priS; DNA primase small subunit PriS K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D RQ359_000630 DNA primase regulatory subunit PriL K18882 priL; DNA primase large subunit
D RQ359_000435 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000444 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000977 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000667 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D RQ359_002343 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D RQ359_002353 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03410 Base excision repair [PATH:smet03410]
D RQ359_002293 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RQ359_000435 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000444 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000977 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_002343 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D RQ359_002353 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D RQ359_001510 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RQ359_001687 udg; type-4 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RQ359_001882 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RQ359_001502 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
C 03420 Nucleotide excision repair [PATH:smet03420]
D RQ359_000351 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RQ359_000120 xpf; 3'-flap repair endonuclease Xpf K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D RQ359_000435 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000444 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000977 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_002353 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03430 Mismatch repair [PATH:smet03430]
D RQ359_000435 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000444 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000977 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_002353 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03440 Homologous recombination
C 03450 Non-homologous end-joining
D RQ359_002343 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
D RQ359_000426 spt4; transcription elongation factor subunit Spt4 K15171 SUPT4H1; transcription elongation factor SPT4
D RQ359_000707 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:smet02010]
D RQ359_000939 substrate-binding domain-containing protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D RQ359_000940 ABC transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein
D RQ359_000683 ATP-binding cassette domain-containing protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D RQ359_000324 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RQ359_001376 ABC transporter substrate-binding protein K17311 treS; trehalose transport system substrate-binding protein
D RQ359_001375 sugar ABC transporter permease K17312 treT; trehalose transport system permease protein
D RQ359_001374 carbohydrate ABC transporter permease K17313 treU; trehalose transport system permease protein
D RQ359_001373 ABC transporter ATP-binding protein K17314 treV; trehalose transport system ATP-binding protein
D RQ359_002018 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:smet03070]
D RQ359_000151 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RQ359_000705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RQ359_000726 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RQ359_000474 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RQ359_000475 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RQ359_000476 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:smet02020]
D RQ359_002375 triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D RQ359_000015 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RQ359_000684 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001833 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001872 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001169 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:smet02024]
D RQ359_000799 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RQ359_000800 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RQ359_000681 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RQ359_001006 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RQ359_001081 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RQ359_001089 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RQ359_001007 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RQ359_001082 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RQ359_001090 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RQ359_001008 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RQ359_001083 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RQ359_001091 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RQ359_001084 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RQ359_001092 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RQ359_000151 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RQ359_000705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RQ359_000726 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RQ359_000818 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:smet04980]
D RQ359_000601 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RQ359_000673 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RQ359_001676 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:smet01000]
C 01001 Protein kinases [BR:smet01001]
D RQ359_000411 Kae1-associated kinase Bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D RQ359_001742 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D RQ359_002360 RIO1 family regulatory kinase/ATPase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:smet01009]
D RQ359_001746 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2
D RQ359_000084 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
C 01002 Peptidases and inhibitors [BR:smet01002]
D RQ359_002308 A24 family peptidase C-terminal domain-containing protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D RQ359_001853 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RQ359_002161 ATP-binding protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RQ359_000558 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RQ359_000559 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RQ359_000454 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RQ359_001078 M1 family metallopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-]
D RQ359_001527 M1 family metallopeptidase K13722 trf2_3; tricorn protease interacting factor F2/3 [EC:3.4.11.-]
D RQ359_001981 M20/M25/M40 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RQ359_002087 M20 family metallopeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RQ359_001968 cpsA; carboxypeptidase CpsA K13048 cps; carboxypeptidase Ss1 [EC:3.4.17.-]
D RQ359_002278 map; type II methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RQ359_000899 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RQ359_002159 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RQ359_000159 hypothetical protein K06974 amzA; archaemetzincin [EC:3.4.-.-]
D RQ359_000820 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D RQ359_000336 PDZ domain-containing protein K08676 tri; tricorn protease [EC:3.4.21.-]
D RQ359_000111 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D RQ359_000070 psmB; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D RQ359_000669 psmB; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D RQ359_001716 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D RQ359_002148 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RQ359_001197 metallopeptidase TldD-related protein K03592 pmbA; PmbA protein
D RQ359_001640 TldD/PmbA family protein K03592 pmbA; PmbA protein
D RQ359_000532 tldD; zinc metalloprotease TldD K03568 tldD; TldD protein
D RQ359_001198 TldD/PmbA family protein K03568 tldD; TldD protein
D RQ359_001639 TldD/PmbA family protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:smet01003]
D RQ359_002243 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]
D RQ359_000984 STT3 domain-containing protein K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18]
D RQ359_002169 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RQ359_000491 glycogen/starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:smet01011]
D RQ359_000309 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 01004 Lipid biosynthesis proteins [BR:smet01004]
D RQ359_000723 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001055 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_001688 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RQ359_002194 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RQ359_000286 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D RQ359_000681 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:smet01006]
D RQ359_002244 gds; geranylgeranyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RQ359_001711 gdS-2; hexaprenyl pyrophosphate synthase K21268 gdS-2; hexaprenyl diphosphate synthase [EC:2.5.1.82]
D RQ359_002025 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RQ359_002303 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RQ359_000538 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:smet01007]
D RQ359_002272 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RQ359_002261 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RQ359_001694 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RQ359_000771 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RQ359_000629 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RQ359_000803 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RQ359_000289 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_000600 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_002269 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RQ359_002336 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RQ359_000069 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RQ359_000400 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RQ359_000588 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RQ359_000620 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RQ359_001811 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RQ359_000712 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RQ359_000996 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RQ359_002280 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RQ359_002281 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RQ359_000802 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RQ359_000265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_000598 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RQ359_001957 aspartate aminotransferase family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RQ359_002347 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:smet03000]
D RQ359_000081 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RQ359_000751 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D RQ359_001713 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D RQ359_002319 lysM; HTH-type transcriptional regulator LysM K06154 lysM; Lrp/AsnC family transcriptional regulator, involved in the regulation of lysine biosynthesis
D RQ359_001656 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D RQ359_000260 thiamine-phosphate synthase family protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D RQ359_001518 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D RQ359_000524 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RQ359_001682 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RQ359_000529 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RQ359_000419 helix-turn-helix domain-containing protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D RQ359_001323 DNA-binding protein K02019 modE; molybdate transport system regulatory protein
D RQ359_000760 helix-turn-helix domain-containing protein K07728 K07728; putative transcriptional regulator
D RQ359_000457 helix-turn-helix domain-containing protein K07731 K07731; putative transcriptional regulator
D RQ359_000533 CopG family ribbon-helix-helix protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D RQ359_001537 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 03021 Transcription machinery [BR:smet03021]
D RQ359_000396 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D RQ359_000757 transcription initiation factor IIB family protein K03124 TFIIB; transcription initiation factor TFIIB
D RQ359_000751 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D RQ359_000080 transcription factor K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D RQ359_000351 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RQ359_000426 spt4; transcription elongation factor subunit Spt4 K15171 SUPT4H1; transcription elongation factor SPT4
D RQ359_000707 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
D RQ359_000976 ATP/GTP-binding protein K24104 GPN; GPN-loop GTPase
D RQ359_000009 NusA-like transcription termination signal-binding factor K02600 nusA; transcription termination/antitermination protein NusA
D RQ359_000012 rpoA1; DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D RQ359_000011 rpoA2; DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D RQ359_000013 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D RQ359_002254 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D RQ359_000427 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D RQ359_000071 DNA-directed RNA polymerase subunit G K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
D RQ359_000014 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D RQ359_000813 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D RQ359_000391 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D RQ359_002250 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D RQ359_000398 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D RQ359_000445 RNA polymerase Rpo13 K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
D RQ359_000392 hypothetical protein K03057 tfs; transcription factor S
D RQ359_000393 transcription factor S K03057 tfs; transcription factor S
D RQ359_000585 DNA-directed RNA polymerase subunit M K03057 tfs; transcription factor S
C 03019 Messenger RNA biogenesis [BR:smet03019]
D RQ359_000426 spt4; transcription elongation factor subunit Spt4 K15171 SUPT4H1; transcription elongation factor SPT4
D RQ359_000707 transcription elongation factor Spt5 K15172 SUPT5H; transcription elongation factor SPT5
D RQ359_000423 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_002341 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_002265 mRNA surveillance protein pelota K06965 PELO; protein pelota
D RQ359_001707 prf1; peptide chain release factor aRF-1 K03265 ETF1; peptide chain release factor subunit 1
D RQ359_000005 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D RQ359_001791 GTP-binding protein K03231 EEF1A; elongation factor 1-alpha
D RQ359_000390 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4
D RQ359_000113 rrp4; exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4
D RQ359_000114 rrp41; exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41
D RQ359_000115 rrp42; exosome complex protein Rrp42 K12589 RRP42; exosome complex component RRP42
D RQ359_000818 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 03041 Spliceosome [BR:smet03041]
D RQ359_001790 ZPR1 zinc finger domain-containing protein K06874 ZPR1; zinc finger protein ZPR1
C 03011 Ribosome [BR:smet03011]
D RQ359_000104 30S ribosomal protein S3ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D RQ359_000140 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e
D RQ359_000430 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e
D RQ359_002313 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e
D RQ359_000062 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e
D RQ359_000698 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e
D RQ359_000408 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e
D RQ359_000420 30S ribosomal protein S25e K02975 RP-S25e; small subunit ribosomal protein S25e
D RQ359_000619 30S ribosomal protein S26e K02976 RP-S26e; small subunit ribosomal protein S26e
D RQ359_000981 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e
D RQ359_000409 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D RQ359_000019 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e
D RQ359_000764 30S ribosomal protein S30e K02983 RP-S30e; small subunit ribosomal protein S30e
D RQ359_000129 rpl4p; 50S ribosomal protein L4 K02930 RP-L4e; large subunit ribosomal protein L4e
D RQ359_002271 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D RQ359_000388 50S ribosomal protein L16 K02866 RP-L10e; large subunit ribosomal protein L10e
D RQ359_001831 ribosomal protein L13e K02873 RP-L13e; large subunit ribosomal protein L13e
D RQ359_000448 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e
D RQ359_000107 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e
D RQ359_002253 50S ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e
D RQ359_000146 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e
D RQ359_000098 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e
D RQ359_000018 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e
D RQ359_000010 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e
D RQ359_000701 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e
D RQ359_000145 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e
D RQ359_000154 50S ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e
D RQ359_000093 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e
D RQ359_000116 50S ribosomal protein L37ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D RQ359_000700 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e
D RQ359_002334 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D RQ359_000980 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e
D RQ359_002249 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RQ359_000134 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RQ359_002256 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RQ359_000148 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RQ359_000006 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RQ359_000143 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RQ359_002251 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RQ359_000004 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RQ359_002255 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RQ359_000008 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RQ359_002257 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RQ359_000142 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RQ359_000432 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RQ359_000137 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RQ359_000132 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RQ359_000709 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RQ359_000131 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RQ359_000128 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RQ359_000141 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RQ359_000144 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RQ359_000710 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RQ359_000708 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RQ359_002252 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RQ359_000138 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RQ359_000150 uL15 family ribosomal protein K02876 RP-L15; large subunit ribosomal protein L15
D RQ359_000147 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RQ359_000133 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RQ359_000130 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RQ359_000139 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RQ359_000135 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RQ359_000149 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RQ359_000711 rpl12p; 50S ribosomal protein P1 K02869 RP-L12; large subunit ribosomal protein L12
D RQ359_000703 rpl18a; 50S ribosomal protein L18Ae K02944 RP-LX; large subunit ribosomal protein LX
D RQ359_000898 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:smet03009]
D RQ359_000763 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56
D RQ359_000983 RNA-protein complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D RQ359_000117 hypothetical protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D RQ359_001636 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D RQ359_001741 RNA-processing protein K06961 KRR1; ribosomal RNA assembly protein
D RQ359_001742 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D RQ359_002360 RIO1 family regulatory kinase/ATPase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D RQ359_000304 adenylate kinase family protein K18532 AK6; adenylate kinase [EC:2.7.4.3]
D RQ359_000052 DUF367 family protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D RQ359_000060 ribosome biogenesis/translation initiation ATPase RLI K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D RQ359_000565 50S ribosome-binding GTPase K06943 NOG1; nucleolar GTP-binding protein
D RQ359_000136 ribonuclease P protein subunit K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D RQ359_000110 Rpp14/Pop5 family protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D RQ359_000109 RNase P p30-like protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D RQ359_000702 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6
D RQ359_001748 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D RQ359_000112 ribosome assembly factor SBDS K14574 SDO1; ribosome maturation protein SDO1
D RQ359_000423 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_002341 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_000762 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase K04795 flpA; fibrillarin-like pre-rRNA processing protein
D RQ359_002271 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D RQ359_000009 NusA-like transcription termination signal-binding factor K02600 nusA; transcription termination/antitermination protein NusA
D RQ359_000101 16S ribosomal RNA methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RQ359_000679 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RQ359_001569 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RQ359_002299 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RQ359_002264 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RQ359_002373 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RQ359_000078 hflX; GTPase HflX K03665 hflX; GTPase
D RQ359_000528 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RQ359_001634 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D RQ359_000106 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:smet03016]
D RQ359_000136 ribonuclease P protein subunit K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D RQ359_000110 Rpp14/Pop5 family protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D RQ359_000109 RNase P p30-like protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D RQ359_001635 ribonuclease P K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D RQ359_000973 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RQ359_000732 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RQ359_000158 archease K24956 ZBTB8OS; protein archease
D RQ359_000005 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D RQ359_001791 GTP-binding protein K03231 EEF1A; elongation factor 1-alpha
D RQ359_002272 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RQ359_000620 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RQ359_000289 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_000600 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_000629 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RQ359_000771 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RQ359_002269 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RQ359_000712 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RQ359_000996 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RQ359_000400 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RQ359_001811 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RQ359_000588 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RQ359_001694 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RQ359_000803 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RQ359_000069 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RQ359_002280 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RQ359_002281 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RQ359_002261 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RQ359_001648 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RQ359_000263 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D RQ359_001504 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RQ359_001745 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
D RQ359_000759 tRNA (guanine(10)-N(2))-dimethyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D RQ359_001802 class I SAM-dependent methyltransferase family protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RQ359_000417 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D RQ359_000746 twy1; 4-demethylwyosine synthase TYW1 K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D RQ359_001632 methyltransferase K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D RQ359_000567 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D RQ359_000450 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RQ359_000449 tRNA pseudouridine synthase A K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RQ359_002337 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D RQ359_000411 Kae1-associated kinase Bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D RQ359_000410 kae1; KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D RQ359_000470 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D RQ359_000528 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RQ359_000662 THUMP domain-containing protein K06963 TAN1; tRNA acetyltransferase TAN1
D RQ359_000969 cca; CCA tRNA nucleotidyltransferase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D RQ359_000068 ribonuclease BN K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D RQ359_000404 endA; tRNA-intron lyase K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D RQ359_000970 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RQ359_002336 aspS; aspartate--tRNA(Asn) ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D RQ359_000039 RsmB/NOP family class I SAM-dependent RNA methyltransferase K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]
D RQ359_001013 trm10; tRNA (adenine(9)-N1)-methyltransferase Trm10 K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221]
D RQ359_000974 RNA methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D RQ359_000079 tRNA methyltransferase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D RQ359_000279 ATP-binding protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D RQ359_002001 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RQ359_002110 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RQ359_000246 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RQ359_001029 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RQ359_002197 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RQ359_000566 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RQ359_000073 tgtA; tRNA guanosine(15) transglycosylase TgtA K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D RQ359_000050 tRNA(Ile)(2)-agmatinylcytidine synthase K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
D RQ359_002146 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
C 03012 Translation factors [BR:smet03012]
D RQ359_001743 translation initiation factor aIF-1A K03236 EIF1A; translation initiation factor 1A
D RQ359_000397 translation initiation factor K03113 EIF1; translation initiation factor 1
D RQ359_000982 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1
D RQ359_001746 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2
D RQ359_000429 translation initiation factor IF-2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3
D RQ359_001389 S-methyl-5-thioribose-1-phosphate isomerase K03239 EIF2B1; translation initiation factor eIF-2B subunit alpha
D RQ359_000727 translation initiation factor IF-5A K03263 EIF5A; translation initiation factor 5A
D RQ359_000016 infB; translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B
D RQ359_000702 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6
D RQ359_000005 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D RQ359_001791 GTP-binding protein K03231 EEF1A; elongation factor 1-alpha
D RQ359_002340 elongation factor 1-beta K03232 EEF1B; elongation factor 1-beta
D RQ359_000121 elongation factor EF-2 K03234 EEF2; elongation factor 2
D RQ359_000389 dph2; diphthamide biosynthesis enzyme Dph2 K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D RQ359_000515 diphthine--ammonia ligase K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D RQ359_001707 prf1; peptide chain release factor aRF-1 K03265 ETF1; peptide chain release factor subunit 1
D RQ359_000102 class I SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RQ359_002338 pth2; peptidyl-tRNA hydrolase Pth2 K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C 03110 Chaperones and folding catalysts [BR:smet03110]
D RQ359_000066 thsB; thermosome subunit beta K22447 cct; archaeal chaperonin
D RQ359_000776 thsA; thermosome subunit alpha K22447 cct; archaeal chaperonin
D RQ359_001620 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RQ359_001789 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RQ359_002088 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D RQ359_000704 pfdA; prefoldin subunit alpha K04797 pfdA; prefoldin alpha subunit
D RQ359_000119 prefoldin subunit beta K04798 pfdB; prefoldin beta subunit
D RQ359_001102 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RQ359_000085 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RQ359_000682 trxA; thioredoxin K03671 TXN; thioredoxin
D RQ359_001646 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:smet04131]
D RQ359_000017 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RQ359_000423 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_002341 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_000496 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RQ359_000005 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D RQ359_001791 GTP-binding protein K03231 EEF1A; elongation factor 1-alpha
C 04121 Ubiquitin system [BR:smet04121]
D RQ359_002334 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D RQ359_000409 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D RQ359_000764 30S ribosomal protein S30e K02983 RP-S30e; small subunit ribosomal protein S30e
C 03051 Proteasome [BR:smet03051]
D RQ359_000111 psmA; archaeal proteasome endopeptidase complex subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D RQ359_000070 psmB; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D RQ359_000669 psmB; archaeal proteasome endopeptidase complex subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D RQ359_000076 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit
C 03032 DNA replication proteins [BR:smet03032]
D RQ359_002074 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RQ359_000435 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000444 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000977 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_002343 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D RQ359_002353 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D RQ359_000081 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RQ359_000983 RNA-protein complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D RQ359_000120 xpf; 3'-flap repair endonuclease Xpf K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D RQ359_002262 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D RQ359_000046 orc1/cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6
D RQ359_000663 ORC1-type DNA replication protein K10725 cdc6A; archaeal cell division control protein 6
D RQ359_001558 orc1/cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6
D RQ359_000660 minichromosome maintenance protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D RQ359_000978 priS; DNA primase small subunit PriS K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D RQ359_000630 DNA primase regulatory subunit PriL K18882 priL; DNA primase large subunit
D RQ359_000661 DNA replication complex GINS family protein K09723 ginS; DNA replication factor GINS
D RQ359_001749 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RQ359_000338 DNA polymerase domain-containing protein K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D RQ359_000635 DNA-directed DNA polymerase I K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D RQ359_002263 3'-5' exonuclease K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D RQ359_000667 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D RQ359_000729 DNA topoisomerase IV subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D RQ359_001365 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D RQ359_000422 rgy; reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
D RQ359_000736 rgy; reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:smet03036]
D RQ359_000081 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RQ359_000127 putative RNA uridine N3 methyltransferase K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
D RQ359_002219 ParA family protein K03496 parA; chromosome partitioning protein
D RQ359_000676 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D RQ359_000305 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RQ359_001103 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:smet03400]
D RQ359_001810 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RQ359_002142 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RQ359_002293 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RQ359_000435 pcn; proliferating cell nuclear antigen (pcna) K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000444 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_000977 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D RQ359_002343 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D RQ359_002353 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D RQ359_000351 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D RQ359_000120 xpf; 3'-flap repair endonuclease Xpf K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D RQ359_001432 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RQ359_001693 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RQ359_001510 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RQ359_001687 udg; type-4 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RQ359_001882 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RQ359_001502 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RQ359_001438 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D RQ359_001662 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D RQ359_001663 mre11; DNA double-strand break repair protein Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11
D RQ359_001242 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D RQ359_001936 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RQ359_000037 radA; DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA
D RQ359_000615 hjc; Holliday junction resolvase Hjc K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D RQ359_001704 hjc; Holliday junction resolvase Hjc K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D RQ359_001661 nurA; DNA double-strand break repair nuclease NurA K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-]
D RQ359_001283 hel308; ATP-dependent DNA helicase Hel308 K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D RQ359_002137 helicase-related protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D RQ359_001425 DNA polymerase IV K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
D RQ359_000447 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RQ359_000734 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RQ359_000769 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RQ359_001059 hypothetical protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RQ359_000784 Nre family DNA repair protein K22585 nreA; DNA repair protein NreA
C 03029 Mitochondrial biogenesis [BR:smet03029]
D RQ359_000136 ribonuclease P protein subunit K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D RQ359_000110 Rpp14/Pop5 family protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D RQ359_000109 RNase P p30-like protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D RQ359_002261 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RQ359_000289 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_000600 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RQ359_000400 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RQ359_000771 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RQ359_000670 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RQ359_000745 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RQ359_000021 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RQ359_000744 gatC; Asp-tRNA(Asn) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RQ359_000305 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RQ359_001103 P-loop NTPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RQ359_000538 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:smet02000]
D RQ359_000939 substrate-binding domain-containing protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D RQ359_000940 ABC transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein
D RQ359_000683 ATP-binding cassette domain-containing protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D RQ359_002130 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RQ359_002129 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RQ359_000324 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RQ359_001376 ABC transporter substrate-binding protein K17311 treS; trehalose transport system substrate-binding protein
D RQ359_001375 sugar ABC transporter permease K17312 treT; trehalose transport system permease protein
D RQ359_001374 carbohydrate ABC transporter permease K17313 treU; trehalose transport system permease protein
D RQ359_001373 ABC transporter ATP-binding protein K17314 treV; trehalose transport system ATP-binding protein
D RQ359_000325 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RQ359_000323 ABC transporter permease subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D RQ359_001006 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RQ359_001081 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RQ359_001089 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RQ359_001007 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RQ359_001082 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RQ359_001090 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RQ359_001008 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RQ359_001083 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RQ359_001091 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RQ359_001084 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RQ359_001092 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RQ359_000479 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RQ359_002306 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RQ359_000480 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RQ359_000481 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RQ359_002018 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D RQ359_002019 ATP-binding cassette domain-containing protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D RQ359_000900 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RQ359_001245 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RQ359_001334 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RQ359_001606 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RQ359_001615 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RQ359_001766 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RQ359_002229 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RQ359_000655 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_000901 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001066 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001216 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001263 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001333 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001563 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001582 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001607 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001614 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001765 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_002228 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RQ359_001058 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RQ359_001056 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RQ359_000828 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RQ359_001260 MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter
D RQ359_001354 MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter
D RQ359_000833 MFS transporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter
D RQ359_000893 MFS transporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter
D RQ359_001971 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D RQ359_001629 MFS transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D RQ359_000904 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D RQ359_000993 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D RQ359_001372 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D RQ359_001384 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D RQ359_001841 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein
D RQ359_002031 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D RQ359_001014 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D RQ359_001017 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D RQ359_001618 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D RQ359_001094 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D RQ359_001137 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D RQ359_001660 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D RQ359_002113 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D RQ359_001126 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D RQ359_002085 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RQ359_000320 ArsB/NhaD family transporter K03893 arsB; arsenical pump membrane protein
D RQ359_001901 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D RQ359_002177 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D RQ359_000583 MarC family protein K05595 marC; multiple antibiotic resistance protein
D RQ359_002115 arsenate reductase (azurin) small subunit K08355 aoxA; arsenite oxidase small subunit [EC:1.20.2.1 1.20.9.1]
D RQ359_002123 molybdopterin dinucleotide binding domain-containing protein K08356 aoxB; arsenite oxidase large subunit [EC:1.20.2.1 1.20.9.1]
D RQ359_002323 cedB; DNA import protein CedB K25503 cedB; DNA import protein CedB
D RQ359_000157 hypothetical protein K25504 cedA; DNA import protein CedA
D RQ359_000156 hypothetical protein K25505 cedA1; DNA import protein CedA1
C 02044 Secretion system [BR:smet02044]
D RQ359_001753 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D RQ359_002297 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D RQ359_001752 type II secretion system F family protein K07333 flaJ; archaeal flagellar protein FlaJ
D RQ359_002296 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D RQ359_002308 A24 family peptidase C-terminal domain-containing protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D RQ359_000151 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RQ359_000726 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RQ359_000705 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RQ359_002312 signal recognition particle subunit SRP19/SEC65 family protein K03105 SRP19; signal recognition particle subunit SRP19
D RQ359_000474 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RQ359_000475 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RQ359_000476 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins
C 02022 Two-component system
C 02035 Bacterial motility proteins [BR:smet02035]
D RQ359_001753 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D RQ359_002297 type II/IV secretion system ATPase subunit K07332 flaI; archaeal flagellar protein FlaI
D RQ359_001752 type II secretion system F family protein K07333 flaJ; archaeal flagellar protein FlaJ
D RQ359_002296 hypothetical protein K07333 flaJ; archaeal flagellar protein FlaJ
D RQ359_002308 A24 family peptidase C-terminal domain-containing protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:smet04812]
D RQ359_002248 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D RQ359_002219 ParA family protein K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:smet04147]
D RQ359_000818 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RQ359_000847 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RQ359_000496 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RQ359_001388 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RQ359_001441 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RQ359_001583 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RQ359_000005 tuf; translation elongation factor EF-1 subunit alpha K03231 EEF1A; elongation factor 1-alpha
D RQ359_001791 GTP-binding protein K03231 EEF1A; elongation factor 1-alpha
D RQ359_000121 elongation factor EF-2 K03234 EEF2; elongation factor 2
D RQ359_002343 fen; flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D RQ359_000409 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D RQ359_000423 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_002341 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D RQ359_001504 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RQ359_000681 class I adenylate-forming enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RQ359_000841 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_001744 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RQ359_000084 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RQ359_000152 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RQ359_000552 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RQ359_000553 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RQ359_001868 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001886 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_001904 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RQ359_000684 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001833 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_001872 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RQ359_002346 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RQ359_001555 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RQ359_000811 NAD(P)-dependent oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RQ359_000569 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001045 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001575 NAD(P)/FAD-dependent oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_002127 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RQ359_001691 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D RQ359_001490 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:smet02048]
D RQ359_001242 cas1b; type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D RQ359_001936 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D RQ359_001238 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RQ359_001935 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RQ359_001237 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D RQ359_001243 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RQ359_002176 PD-(D/E)XK nuclease family protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D RQ359_001255 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D RQ359_001240 cas7b; type I-B CRISPR-associated protein Cas7/Csh2 K19115 csh2; CRISPR-associated protein Csh2
D RQ359_001239 cas5; CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D RQ359_002032 crn1; CRISPR-associated ring nuclease Crn1 K19135 csx14; CRISPR-associated protein Csx14
D RQ359_001227 csx7; CRISPR-associated RAMP protein Csx7 K09002 csm3; CRISPR-associated protein Csm3
D RQ359_001927 RAMP superfamily CRISPR-associated protein K09002 csm3; CRISPR-associated protein Csm3
D RQ359_001926 RAMP superfamily CRISPR-associated protein K19140 csm5; CRISPR-associated protein Csm5
D RQ359_001145 csx1; CRISPR-associated CARF protein Csx1 K19143 csx1; CRISPR-associated protein Csx1
D RQ359_001923 csx1; CRISPR-associated CARF protein Csx1 K19143 csx1; CRISPR-associated protein Csx1
D RQ359_000081 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RQ359_001940 site-specific DNA-methyltransferase K24451 zim; modification methylase
D RQ359_000866 cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE
D RQ359_000418 ribbon-helix-helix domain-containing protein K07746 parD1_3_4; antitoxin ParD1/3/4
D RQ359_002272 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RQ359_001627 NOB1 family endonuclease K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:smet03100]
D RQ359_000898 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RQ359_001795 cutC; glyceraldehyde dehydrogenase subunit gamma K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RQ359_001796 cutB; glyceraldehyde dehydrogenase subunit beta K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RQ359_001567 cutA; glyceraldehyde dehydrogenase subunit alpha K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RQ359_001869 xanthine dehydrogenase family protein K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RQ359_001889 xanthine dehydrogenase family protein molybdopterin-binding subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RQ359_001697 FAD-dependent oxidoreductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D RQ359_000838 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RQ359_001669 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RQ359_002072 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RQ359_001877 peroxiredoxin K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D RQ359_002073 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RQ359_001949 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D RQ359_001631 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RQ359_000025 radical SAM protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D RQ359_000539 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D RQ359_000935 hydrogenase K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D RQ359_000934 proton-conducting transporter membrane subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D RQ359_000749 dph5; diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98]
D RQ359_000731 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D RQ359_000631 pgsA; archaetidylinositol phosphate synthase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D RQ359_000875 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RQ359_002236 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RQ359_001572 DNA-binding protein K16640 ssh7; DNA-binding protein 7 [EC:3.1.27.-]
D RQ359_000810 N-glycosylase/DNA lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D RQ359_001906 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D RQ359_001416 Rid family detoxifying hydrolase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RQ359_000189 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RQ359_001729 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RQ359_000041 SAM-dependent chlorinase/fluorinase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D RQ359_001206 uvsE; UV DNA damage repair endonuclease UvsE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D RQ359_001668 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RQ359_001423 rtcA; RNA 3'-terminal phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4]
C 99981 Carbohydrate metabolism
D RQ359_001379 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D RQ359_002209 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
D RQ359_001523 lactate utilization protein B K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D RQ359_001119 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D RQ359_000294 cbb3-type cytochrome c oxidase subunit I K16933 doxB; heme bearing subunit I of the terminal oxidase
D RQ359_002239 cbb3-type cytochrome c oxidase subunit I K16933 doxB; heme bearing subunit I of the terminal oxidase
D RQ359_002238 oxidase K16934 doxC; terminal oxidase subunit
D RQ359_002237 hypothetical protein K16935 doxE; terminal oxidase small hydrophobic subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D RQ359_000518 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RQ359_000077 multiprotein bridging factor aMBF1 K03627 MBF1; putative transcription factor
D RQ359_000737 albA; DNA-binding protein Alba K03622 ssh10b; archaea-specific DNA-binding protein
D RQ359_000092 LSm family protein K04796 RUXX; small nuclear ribonucleoprotein
D RQ359_002363 U6 snRNA-associated Sm-like protein LSm6 K04796 RUXX; small nuclear ribonucleoprotein
D RQ359_002288 CBS domain-containing protein K07744 K07744; transcriptional regulator
C 99974 Translation
D RQ359_000100 DUF655 domain-containing protein K07572 K07572; putative nucleotide binding protein
D RQ359_000459 MBL fold metallo-hydrolase K07577 K07577; putative mRNA 3-end processing factor
D RQ359_002352 MBL fold metallo-hydrolase K07577 K07577; putative mRNA 3-end processing factor
D RQ359_002339 zinc finger domain-containing protein K07580 K07580; Zn-ribbon RNA-binding protein
D RQ359_000108 RNA-binding domain-containing protein K07581 K07581; RNA-binding protein
C 99975 Protein processing
D RQ359_001953 hypothetical protein K03187 ureE; urease accessory protein
D RQ359_001954 urease accessory UreF family protein K03188 ureF; urease accessory protein
D RQ359_001955 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D RQ359_001296 AIR synthase family protein K04655 hypE; hydrogenase expression/formation protein HypE
D RQ359_002258 AIR synthase related protein K07388 K07388; hydrogenase expression/formation protein
D RQ359_000075 pseudouridine synthase K07398 K07398; conserved protein with predicted RNA binding PUA domain
D RQ359_002231 Rdx family protein K07401 K07401; selenoprotein W-related protein
D RQ359_001353 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RQ359_000199 IS607 family transposase K07450 K07450; putative resolvase
D RQ359_001813 endonuclease III domain-containing protein K07457 K07457; endonuclease III related protein
D RQ359_001258 RuvB-like helicase K07472 TIP49; TBP-interacting protein
D RQ359_000548 haloacid dehalogenase K07477 K07477; translin
D RQ359_000200 transposase K07496 K07496; putative transposase
D RQ359_000535 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D RQ359_000989 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D RQ359_001190 transposase K07496 K07496; putative transposase
D RQ359_001256 transposase K07496 K07496; putative transposase
D RQ359_001447 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D RQ359_001480 transposase K07496 K07496; putative transposase
D RQ359_001900 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D RQ359_001918 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D RQ359_001934 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D RQ359_002095 RNA-guided endonuclease TnpB family protein K07496 K07496; putative transposase
D RQ359_002186 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RQ359_001428 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D RQ359_001880 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D RQ359_001910 cytosine permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D RQ359_001844 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D RQ359_000968 serine/threonine protein kinase K07176 K07176; putative serine/threonine protein kinase
D RQ359_000699 DNA-binding protein K06875 PDCD5; programmed cell death protein 5
C 99992 Structural proteins
C 99994 Others
D RQ359_000743 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RQ359_000616 ATPase, T2SS/T4P/T4SS family K06865 K06865; ATPase
D RQ359_002199 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D RQ359_000564 metG; methionine--tRNA ligase subunit beta K06878 K06878; tRNA-binding protein
D RQ359_000259 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D RQ359_001570 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D RQ359_002126 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D RQ359_000122 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D RQ359_001010 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D RQ359_000650 Sjogren's syndrome/scleroderma autoantigen 1 family protein K07143 K07143; UPF0148 protein
D RQ359_000499 DUF202 domain-containing protein K00389 yidH; putative membrane protein
D RQ359_000754 DUF373 family protein K08975 K08975; putative membrane protein
D RQ359_001721 DUF2070 family protein K08979 K08979; putative membrane protein
C 99997 Function unknown
D RQ359_000074 PAC2 family protein K06869 K06869; uncharacterized protein
D RQ359_000825 PAC2 family protein K06869 K06869; uncharacterized protein
D RQ359_001398 serine protease K06870 K06870; uncharacterized protein
D RQ359_001311 radical SAM protein K06871 K06871; uncharacterized protein
D RQ359_002101 radical SAM protein K06871 K06871; uncharacterized protein
D RQ359_001804 HD domain-containing protein K06885 K06885; uncharacterized protein
D RQ359_002274 HD domain-containing protein K06885 K06885; uncharacterized protein
D RQ359_001539 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D RQ359_001465 ATP-binding protein K06921 K06921; uncharacterized protein
D RQ359_002103 ATP-binding protein K06921 K06921; uncharacterized protein
D RQ359_001035 CoA-binding protein K06929 K06929; uncharacterized protein
D RQ359_000750 metallophosphoesterase K06953 K06953; uncharacterized protein
D RQ359_002178 MBL fold metallo-hydrolase K07022 K07022; uncharacterized protein
D RQ359_000830 SufD family Fe-S cluster assembly protein K07033 K07033; uncharacterized protein
D RQ359_000715 acetate uptake transporter K07034 K07034; uncharacterized protein
D RQ359_000087 beta-CASP ribonuclease aCPSF1 K07041 K07041; uncharacterized protein
D RQ359_001873 amidohydrolase family protein K07045 K07045; uncharacterized protein
D RQ359_000859 PIN domain-containing protein K07064 K07064; uncharacterized protein
D RQ359_001152 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D RQ359_002090 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D RQ359_000842 Zn-ribbon domain-containing OB-fold protein K07068 K07068; uncharacterized protein
D RQ359_001265 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RQ359_001684 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RQ359_002196 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RQ359_000694 DsrE/DsrF/DrsH-like family protein K07092 K07092; uncharacterized protein
D RQ359_001046 DsrE family protein K07092 K07092; uncharacterized protein
D RQ359_002004 DsrE family protein K07092 K07092; uncharacterized protein
D RQ359_001217 metallophosphoesterase family protein K07095 K07095; uncharacterized protein
D RQ359_001650 metallophosphoesterase K07096 K07096; uncharacterized protein
D RQ359_001876 metallophosphoesterase K07096 K07096; uncharacterized protein
D RQ359_001888 metallophosphoesterase K07096 K07096; uncharacterized protein
D RQ359_001440 DHHA1 domain-containing protein K07097 K07097; uncharacterized protein
D RQ359_001708 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RQ359_001786 phosphoribosyltransferase family protein K07101 K07101; uncharacterized protein
D RQ359_000501 transcriptional regulator K07108 K07108; uncharacterized protein
D RQ359_000768 transcriptional regulator K07108 K07108; uncharacterized protein
D RQ359_001415 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D RQ359_002002 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RQ359_000941 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D RQ359_002266 radical SAM protein K07129 K07129; uncharacterized protein
D RQ359_001185 DUF4143 domain-containing protein K07133 K07133; uncharacterized protein
D RQ359_001937 ATP-binding protein K07133 K07133; uncharacterized protein
D RQ359_000032 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RQ359_000428 PIN domain-containing protein K07158 K07158; uncharacterized protein
D RQ359_000331 DUF763 domain-containing protein K09003 K09003; uncharacterized protein
D RQ359_001363 DsrE family protein K09004 K09004; uncharacterized protein
D RQ359_000045 DUF99 family protein K09120 K09120; uncharacterized protein
D RQ359_002358 Mut7-C RNAse domain-containing protein K09122 K09122; uncharacterized protein
D RQ359_000542 adenosine-specific kinase K09129 K09129; uncharacterized protein
D RQ359_002357 TIGR00296 family protein K09141 K09141; uncharacterized protein
D RQ359_001489 hypothetical protein K09147 K09147; uncharacterized protein
D RQ359_001747 DUF424 family protein K09148 K09148; uncharacterized protein
D RQ359_002361 DUF460 domain-containing protein K09150 K09150; uncharacterized protein
D RQ359_000695 DUF711 family protein K09157 K09157; uncharacterized protein
D RQ359_001845 DUF711 family protein K09157 K09157; uncharacterized protein
D RQ359_001793 SRPBCC domain-containing protein K09386 K09386; uncharacterized protein
D RQ359_001960 RNA repair domain-containing protein K09715 K09715; uncharacterized protein
D RQ359_002376 nucleotidyltransferase domain-containing protein K09717 K09717; uncharacterized protein
D RQ359_000651 UPF0147 family protein K09721 K09721; uncharacterized protein
D RQ359_000603 DUF211 domain-containing protein K09732 K09732; uncharacterized protein
D RQ359_000972 RNA-binding domain-containing protein K09736 K09736; uncharacterized protein
D RQ359_000761 DUF61 family protein K09737 K09737; uncharacterized protein
D RQ359_001633 DUF371 domain-containing protein K09738 K09738; uncharacterized protein
D RQ359_000464 DUF790 family protein K09744 K09744; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024