+D GENES KO #

  KEGG Orthology (KO) - Spiroplasma mirum ATCC 29335 SMCA

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:smia00010] D P344_01545 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D P344_00925 hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D P344_06955 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D P344_06050 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D P344_05980 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D P344_06080 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D P344_05295 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D P344_05490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D P344_04160 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D P344_01940 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D P344_01945 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D P344_01950 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D P344_05870 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D P344_02535 glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D P344_06405 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D P344_05790 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D P344_06185 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:smia00020] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D P344_01940 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D P344_01945 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D P344_01950 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:smia00030] D P344_01545 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D P344_05765 hypothetical protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D P344_03330 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D P344_06140 hypothetical protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D P344_05440 hypothetical protein K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D P344_05870 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D P344_06125 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D P344_02535 glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D P344_06955 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D P344_00925 hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:smia00040] D P344_01405 hypothetical protein K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D P344_01415 hypothetical protein K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D P344_04785 hypothetical protein K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D P344_04770 hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D P344_04755 hypothetical protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D P344_05765 hypothetical protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:smia00051] D P344_00410 hypothetical protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D P344_00925 hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D P344_06955 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D P344_06050 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D P344_06140 hypothetical protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D P344_00415 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D P344_06785 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 00052 Galactose metabolism [PATH:smia00052] D P344_05870 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:smia00053] D P344_04790 hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D P344_04785 hypothetical protein K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D P344_04770 hypothetical protein K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D P344_04755 hypothetical protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] C 00500 Starch and sucrose metabolism [PATH:smia00500] D P344_00535 hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D P344_06220 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D P344_00475 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D P344_06405 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D P344_05870 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D P344_01545 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:smia00520] D P344_06405 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D P344_06920 hypothetical protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D P344_06670 hypothetical protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D P344_05610 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D P344_02190 hypothetical protein K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D P344_02205 hypothetical protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D P344_06190 hypothetical protein K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D P344_05790 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D P344_06185 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D P344_05870 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D P344_01545 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D P344_00410 hypothetical protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] C 00620 Pyruvate metabolism [PATH:smia00620] D P344_01940 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D P344_01945 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D P344_01950 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D P344_05570 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] D P344_05575 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D P344_04160 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D P344_06850 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:smia00630] D P344_06720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:smia00640] D P344_05570 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] D P344_05575 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00650 Butanoate metabolism [PATH:smia00650] D P344_00710 hypothetical protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D P344_06950 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D P344_06945 hypothetical protein K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:smia00660] D P344_06950 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D P344_06945 hypothetical protein K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00562 Inositol phosphate metabolism [PATH:smia00562] D P344_05445 hypothetical protein K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D P344_06050 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:smia00190] D P344_00590 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D P344_00600 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D P344_00595 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D P344_00585 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D P344_00605 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D P344_00570 hypothetical protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a D P344_00580 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D P344_00575 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c D P344_05495 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c D P344_02615 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:smia00710] D P344_06080 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D P344_05980 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D P344_06955 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D P344_00925 hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D P344_03330 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D P344_06140 hypothetical protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D P344_06050 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D P344_05765 hypothetical protein K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00720 Other carbon fixation pathways [PATH:smia00720] D P344_04520 hypothetical protein K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D P344_04525 hypothetical protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D P344_05575 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D P344_05570 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] C 00680 Methane metabolism [PATH:smia00680] D P344_06720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D P344_05490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D P344_06955 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D P344_00925 hypothetical protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D P344_05570 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] D P344_05575 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D P344_05295 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] C 00910 Nitrogen metabolism D P344_01085 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism D P344_00260 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis D P344_06300 hypothetical protein K02078 acpP; acyl carrier protein C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:smia00561] D P344_00995 hypothetical protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D P344_04960 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D P344_03360 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D P344_02585 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:smia00564] D P344_02155 hypothetical protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D P344_04960 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D P344_03360 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D P344_02585 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D P344_04950 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D P344_05345 hypothetical protein K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D P344_06330 hypothetical protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:smia00230] D P344_05870 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D P344_06125 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D P344_01425 hypothetical protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D P344_02910 hypothetical protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D P344_01885 hypothetical protein K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D P344_05910 hypothetical protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D P344_05485 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D P344_07145 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D P344_03935 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D P344_05905 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D P344_04605 guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7] D P344_05225 hypothetical protein K00942 gmk; guanylate kinase [EC:2.7.4.8] D P344_04435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D P344_02225 ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D P344_04445 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D P344_02915 hypothetical protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D P344_01420 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D P344_02610 deoxyguanosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D P344_00725 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D P344_01780 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D P344_01085 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:smia00240] D P344_04970 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D P344_01350 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D P344_02145 hypothetical protein K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D P344_03810 hypothetical protein K00876 udk; uridine kinase [EC:2.7.1.48] D P344_00560 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D P344_00725 hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D P344_02590 deoA; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D P344_04560 hypothetical protein K01489 cdd; cytidine deaminase [EC:3.5.4.5] D P344_04435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D P344_02225 ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D P344_04445 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D P344_02610 deoxyguanosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D P344_04205 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D P344_00055 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D P344_00270 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D P344_02575 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:smia00250] D P344_00180 hypothetical protein K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D P344_01420 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D P344_01425 hypothetical protein K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] C 00260 Glycine, serine and threonine metabolism [PATH:smia00260] D P344_06720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D P344_05295 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00270 Cysteine and methionine metabolism [PATH:smia00270] D P344_00455 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D P344_00750 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D P344_03030 hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] C 00280 Valine, leucine and isoleucine degradation [PATH:smia00280] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:smia00290] D P344_06950 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] C 00300 Lysine biosynthesis D P344_05150 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] C 00310 Lysine degradation D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis [PATH:smia00220] D P344_01075 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D P344_01070 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D P344_01085 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00330 Arginine and proline metabolism C 00340 Histidine metabolism C 00350 Tyrosine metabolism C 00360 Phenylalanine metabolism C 00380 Tryptophan metabolism D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:smia00430] D P344_05575 hypothetical protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D P344_05570 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:smia00450] D P344_00455 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D P344_06600 hypothetical protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D P344_06085 hypothetical protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D P344_01175 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:smia00460] D P344_00180 hypothetical protein K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D P344_06720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism C 00480 Glutathione metabolism [PATH:smia00480] D P344_00890 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis D P344_00410 hypothetical protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] C 00550 Peptidoglycan biosynthesis [PATH:smia00550] D P344_04565 hypothetical protein K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D P344_04955 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:smia00730] D P344_05595 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D P344_03115 hypothetical protein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D P344_05770 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D P344_05760 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D P344_01780 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D P344_00620 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:smia00740] D P344_00955 COF family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D P344_04470 hypothetical protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D P344_04475 hypothetical protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:smia00760] D P344_06255 hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D P344_01885 hypothetical protein K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D P344_03025 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D P344_02795 hypothetical protein K01916 nadE; NAD+ synthase [EC:6.3.1.5] D P344_05340 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D P344_01240 hypothetical protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D P344_01130 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:smia00770] D P344_06950 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D P344_04485 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D P344_04490 hypothetical protein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D P344_01550 hypothetical protein K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D P344_05465 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D P344_04195 hypothetical protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism C 00785 Lipoic acid metabolism [PATH:smia00785] D P344_01935 hypothetical protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D P344_01940 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D P344_01945 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D P344_01950 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00790 Folate biosynthesis [PATH:smia00790] D P344_02580 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D P344_06030 hypothetical protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] C 00670 One carbon pool by folate [PATH:smia00670] D P344_02580 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D P344_04520 hypothetical protein K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D P344_04525 hypothetical protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D P344_06720 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D P344_02715 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D P344_02575 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D P344_06585 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:smia00860] D P344_00905 hypothetical protein K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:smia00900] D P344_03115 hypothetical protein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D P344_04945 hypothetical protein K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D P344_00185 hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D P344_07015 hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D P344_01265 hypothetical protein K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D P344_03770 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D P344_04880 hypothetical protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D P344_04955 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D P344_03330 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D P344_05870 hypothetical protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D P344_06300 hypothetical protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D P344_00750 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:smia03020] D P344_00360 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D P344_00370 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D P344_01805 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D P344_01345 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:smia03010] D P344_04185 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D P344_01710 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D P344_05605 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D P344_01765 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D P344_00190 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6 D P344_00380 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D P344_01750 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D P344_06695 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D P344_01675 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D P344_01800 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D P344_00375 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D P344_01795 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D P344_01745 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D P344_04430 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D P344_05970 hypothetical protein K02959 RP-S16; small subunit ribosomal protein S16 D P344_01725 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D P344_00200 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D P344_01700 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D P344_04610 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D P344_06510 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D P344_01695 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D P344_01680 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D P344_01685 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D P344_01740 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D P344_01755 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D P344_06865 hypothetical protein K02935 RP-L7; large subunit ribosomal protein L7/L12 D P344_01650 hypothetical protein K02939 RP-L9; large subunit ribosomal protein L9 D P344_06870 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D P344_06515 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D P344_06700 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D P344_01730 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D P344_01770 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D P344_01715 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D P344_01810 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D P344_01760 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D P344_05950 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D P344_04075 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D P344_02415 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21 D P344_01705 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D P344_01690 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D P344_01735 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D P344_02425 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D P344_05750 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D P344_00245 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D P344_04265 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D P344_03400 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D P344_04080 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D P344_01790 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D P344_03920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D P344_03915 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D P344_03910 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:smia00970] D P344_01625 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D P344_05665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D P344_02635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D P344_05675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D P344_01025 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D P344_05640 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D P344_05680 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D P344_03440 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D P344_03965 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D P344_01030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D P344_03950 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D P344_00435 tRNA-His K14226 tRNA-His; tRNA His D P344_01620 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D P344_01050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D P344_03955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D P344_05755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D P344_01045 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D P344_03960 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D P344_05645 tRNA-Met K14230 tRNA-Met; tRNA Met D P344_05660 tRNA-Met K14230 tRNA-Met; tRNA Met D P344_05655 tRNA-Met K14230 tRNA-Met; tRNA Met D P344_05635 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D P344_05670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D P344_05650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D P344_06280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D P344_06335 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D P344_01040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D P344_03975 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D P344_06285 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D P344_03970 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D P344_01035 tRNA-Val K14237 tRNA-Val; tRNA Val D P344_03980 tRNA-Val K14237 tRNA-Val; tRNA Val D P344_06290 tRNA-Trp K14238 tRNA-Sec; tRNA Sec D P344_01335 glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D P344_06385 hypothetical protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D P344_06380 hypothetical protein K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D P344_06390 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D P344_03045 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D P344_03320 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D P344_01890 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D P344_04905 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D P344_04155 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D P344_00030 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D P344_01185 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D P344_01175 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D P344_02715 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D P344_02510 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D P344_01115 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D P344_04225 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D P344_00175 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D P344_05215 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D P344_06320 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D P344_03315 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D P344_04325 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D P344_04320 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D P344_06230 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D P344_05510 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:smia03060] D P344_01775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D P344_00645 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D P344_02905 hypothetical protein K12257 secDF; SecD/SecF fusion protein D P344_07095 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D P344_06065 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D P344_04980 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D P344_00715 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D P344_04220 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:smia04122] D P344_03880 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D P344_05595 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:smia03018] D P344_05490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D P344_00990 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D P344_00650 hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D P344_02455 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D P344_04985 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D P344_05245 beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D P344_01555 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D P344_00975 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK B B 09124 Replication and repair C 03030 DNA replication [PATH:smia03030] D P344_05585 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D P344_04935 hypothetical protein K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D P344_00040 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D P344_00060 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D P344_00805 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D P344_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D P344_01655 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D P344_04900 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D P344_00195 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D P344_05935 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D P344_04200 hypothetical protein K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D P344_07010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D P344_06395 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:smia03410] D P344_06805 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D P344_01225 hypothetical protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D P344_06975 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D P344_03780 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D P344_07010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D P344_06395 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:smia03420] D P344_06035 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D P344_06100 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D P344_04070 hypothetical protein K03703 uvrC; excinuclease ABC subunit C D P344_01855 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D P344_07010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D P344_06395 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:smia03430] D P344_01855 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D P344_03100 hypothetical protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D P344_03105 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D P344_00195 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D P344_05585 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D P344_04935 hypothetical protein K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D P344_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D P344_00040 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D P344_00805 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D P344_00060 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D P344_06395 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:smia03440] D P344_00195 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D P344_00050 hypothetical protein K06187 recR; recombination protein RecR D P344_07010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D P344_02890 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D P344_03875 hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D P344_05585 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D P344_04935 hypothetical protein K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D P344_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D P344_00040 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D P344_00805 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D P344_00060 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:smia02010] D P344_00780 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D P344_00775 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D P344_00770 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D P344_00330 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D P344_00340 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D P344_00345 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D P344_00335 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D P344_05890 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D P344_05885 hypothetical protein K02037 pstC; phosphate transport system permease protein D P344_05880 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D P344_01605 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D P344_01595 cbiO; cobalt ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D P344_01600 cbiO; cobalt ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] C 02060 Phosphotransferase system (PTS) [PATH:smia02060] D P344_06485 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D P344_01865 hypothetical protein K02784 ptsH; phosphocarrier protein HPr D P344_06405 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D P344_05790 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D P344_06185 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D P344_06920 hypothetical protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D P344_02190 hypothetical protein K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D P344_01970 hypothetical protein K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D P344_00535 hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D P344_06220 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D P344_00475 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D P344_04790 hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D P344_00415 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D P344_06785 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] C 03070 Bacterial secretion system [PATH:smia03070] D P344_02905 hypothetical protein K12257 secDF; SecD/SecF fusion protein D P344_00645 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D P344_01775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D P344_07095 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D P344_06065 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D P344_00715 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D P344_04980 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D P344_02250 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:smia02020] D P344_05890 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D P344_00010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:smia02024] D P344_07095 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D P344_02905 hypothetical protein K12257 secDF; SecD/SecF fusion protein D P344_00645 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D P344_01775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D P344_06065 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D P344_00715 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D P344_04980 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D P344_04895 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D P344_05490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:smia01000] C 01001 Protein kinases [BR:smia01001] D P344_05775 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:smia01009] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D P344_05780 hypothetical protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:smia01002] D P344_04220 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] D P344_05905 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D P344_02860 hypothetical protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D P344_05280 hypothetical protein K07052 K07052; CAAX protease family protein D P344_00900 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D P344_00890 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D P344_05150 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D P344_01815 hypothetical protein K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D P344_03120 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D P344_00075 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D P344_04940 hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D P344_02650 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] C 01003 Glycosyltransferases C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins C 01004 Lipid biosynthesis proteins [BR:smia01004] D P344_00995 hypothetical protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D P344_04960 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D P344_03360 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D P344_02585 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:smia01006] D P344_04955 hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D P344_03730 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] C 01007 Amino acid related enzymes [BR:smia01007] D P344_01335 glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D P344_06230 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D P344_05510 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D P344_01185 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D P344_05215 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D P344_01175 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D P344_04225 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D P344_02510 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D P344_01115 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D P344_00175 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D P344_03320 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D P344_01890 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D P344_03315 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D P344_04905 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D P344_00030 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D P344_06320 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D P344_04155 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D P344_03045 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D P344_04325 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D P344_04320 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D P344_00455 hypothetical protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:smia00194] D P344_00605 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D P344_00600 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D P344_00595 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D P344_00590 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D P344_00585 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D P344_00580 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D P344_00575 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c D P344_05495 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c D P344_00570 hypothetical protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:smia03000] D P344_07040 hypothetical protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D P344_05745 hypothetical protein K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D P344_04065 hypothetical protein K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D P344_06675 hypothetical protein K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D P344_02735 hypothetical protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D P344_01860 hypothetical protein K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D P344_04020 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D P344_06295 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D P344_01880 hypothetical protein K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon D P344_01255 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D P344_00965 hypothetical protein K03705 hrcA; heat-inducible transcriptional repressor D P344_00620 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D P344_04260 MraZ family transcriptional regulator K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:smia03021] D P344_01805 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D P344_00360 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D P344_00370 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D P344_01345 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta D P344_04895 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D P344_05835 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D P344_03095 hypothetical protein K03625 nusB; transcription antitermination protein NusB D P344_01220 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D P344_03805 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA C 03019 Messenger RNA biogenesis [BR:smia03019] D P344_01000 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D P344_05245 beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D P344_01555 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D P344_04985 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-] D P344_00650 hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D P344_05860 hypothetical protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D P344_02455 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D P344_04715 hypothetical protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D P344_05490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D P344_00990 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D P344_04170 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D P344_00975 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK C 03041 Spliceosome C 03011 Ribosome [BR:smia03011] D P344_04185 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D P344_01710 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D P344_05605 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D P344_01765 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D P344_00190 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6 D P344_00380 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D P344_01750 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D P344_06695 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D P344_01675 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D P344_01800 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D P344_00375 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D P344_01795 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D P344_01745 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D P344_04430 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D P344_05970 hypothetical protein K02959 RP-S16; small subunit ribosomal protein S16 D P344_01725 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D P344_00200 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D P344_01700 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D P344_04610 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D P344_06510 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D P344_01695 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D P344_01680 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D P344_01685 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D P344_01740 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D P344_01755 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D P344_01650 hypothetical protein K02939 RP-L9; large subunit ribosomal protein L9 D P344_06870 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D P344_06515 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D P344_06865 hypothetical protein K02935 RP-L7; large subunit ribosomal protein L7/L12 D P344_06700 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D P344_01730 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D P344_01770 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D P344_01715 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D P344_01810 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D P344_01760 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D P344_05950 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D P344_04075 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D P344_02415 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21 D P344_01705 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D P344_01690 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D P344_01735 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D P344_02425 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D P344_05750 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D P344_00245 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D P344_04265 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D P344_03400 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D P344_04080 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D P344_01790 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D P344_03910 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D P344_03920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D P344_03915 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:smia03009] D P344_01000 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D P344_04920 era; GTPase Era K03595 era; GTPase D P344_02790 hypothetical protein K03979 obgE; GTPase [EC:3.6.5.-] D P344_05835 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA D P344_03095 hypothetical protein K03625 nusB; transcription antitermination protein NusB D P344_01220 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG D P344_07020 hypothetical protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D P344_05220 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D P344_05230 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D P344_05460 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D P344_01245 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D P344_04255 hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D P344_01435 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D P344_02940 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D P344_01200 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D P344_01665 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D P344_05785 23S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D P344_02605 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D P344_05275 hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D P344_04215 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D P344_05250 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D P344_05960 hypothetical protein K02860 rimM; 16S rRNA processing protein RimM D P344_03050 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D P344_02455 hypothetical protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D P344_04715 hypothetical protein K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D P344_05770 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D P344_02150 engA; GTP-binding protein Der K03977 engA; GTPase D P344_05940 hypothetical protein K14540 rbgA; ribosome biogenesis GTPase A D P344_05945 hypothetical protein K14540 rbgA; ribosome biogenesis GTPase A D P344_03740 hypothetical protein K06948 yqeH; 30S ribosome assembly GTPase D P344_00305 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D P344_02915 hypothetical protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D P344_04545 hypothetical protein K02834 rbfA; ribosome-binding factor A D P344_04570 hypothetical protein K07042 ybeY; probable rRNA maturation factor D P344_02800 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D P344_01260 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:smia03016] D P344_06320 hypothetical protein K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D P344_04225 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D P344_01115 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D P344_01175 hypothetical protein K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D P344_05215 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D P344_00175 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D P344_03320 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D P344_03045 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D P344_01890 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D P344_04905 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D P344_04155 hypothetical protein K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D P344_00030 hypothetical protein K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D P344_01185 hypothetical protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D P344_02510 hypothetical protein K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D P344_03315 hypothetical protein K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D P344_04325 hypothetical protein K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D P344_04320 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D P344_06230 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D P344_05510 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D P344_06630 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D P344_06815 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D P344_01610 hypothetical protein K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D P344_04480 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D P344_00305 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D P344_03730 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D P344_07080 hypothetical protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D P344_01180 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D P344_07100 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D P344_01335 glutamyl-tRNA synthase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D P344_00035 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D P344_05955 hypothetical protein K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D P344_04890 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D P344_03930 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D P344_05085 hypothetical protein K03437 spoU; RNA methyltransferase, TrmH family D P344_03880 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D P344_05595 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D P344_00070 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D P344_05255 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D P344_01870 hypothetical protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D P344_05260 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D P344_00650 hypothetical protein K12573 rnr; ribonuclease R [EC:3.1.13.1] D P344_00990 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:smia03012] D P344_05820 hypothetical protein K02519 infB; translation initiation factor IF-2 D P344_04085 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D P344_04180 hypothetical protein K02357 tsf; elongation factor Ts D P344_00390 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D P344_00385 fusA; elongation factor P K02355 fusA; elongation factor G D P344_00290 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D P344_04965 ribosome recycling factor K02838 frr; ribosome recycling factor D P344_00295 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D P344_01430 hypothetical protein K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D P344_01785 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D P344_03845 elongation factor P K02356 efp; elongation factor P C 03110 Chaperones and folding catalysts [BR:smia03110] D P344_00960 ATPase AAA K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D P344_06655 hypothetical protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D P344_00975 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D P344_00980 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ D P344_00125 hypothetical protein K04083 hslO; molecular chaperone Hsp33 D P344_00970 hypothetical protein K03687 GRPE; molecular chaperone GrpE D P344_00075 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D P344_00570 hypothetical protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a D P344_01060 hypothetical protein K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:smia04131] D P344_05980 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D P344_04160 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:smia03032] D P344_05430 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D P344_00010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D P344_01655 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D P344_04900 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101] D P344_06020 hypothetical protein K03346 dnaB; replication initiation and membrane attachment protein D P344_06015 hypothetical protein K11144 dnaI; primosomal protein DnaI D P344_00195 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D P344_05585 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D P344_04935 hypothetical protein K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D P344_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D P344_00805 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D P344_00060 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D P344_00040 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D P344_05935 hypothetical protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D P344_04200 hypothetical protein K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D P344_07010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D P344_06395 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D P344_00025 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D P344_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D P344_03385 hypothetical protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D P344_03375 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D P344_01535 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:smia03036] D P344_01000 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D P344_05430 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D P344_00010 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D P344_02595 hypothetical protein K05896 scpA; segregation and condensation protein A D P344_02600 hypothetical protein K06024 scpB; segregation and condensation protein B D P344_04250 hypothetical protein K03590 ftsA; cell division protein FtsA D P344_01560 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D P344_04245 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D P344_05600 hypothetical protein K06286 ezrA; septation ring formation regulator D P344_04240 hypothetical protein K09772 sepF; cell division inhibitor SepF D P344_07030 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07050 hypothetical protein K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07065 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07070 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_02665 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_01250 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D P344_01255 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D P344_03385 hypothetical protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D P344_03375 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D P344_01180 hypothetical protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D P344_01245 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D P344_05080 hypothetical protein K03978 engB; GTP-binding protein D P344_06060 hypothetical protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:smia03400] D P344_06805 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D P344_01225 hypothetical protein K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D P344_07040 hypothetical protein K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] D P344_07045 hypothetical protein K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D P344_06975 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D P344_03780 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D P344_06395 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D P344_07010 hypothetical protein K02335 polA; DNA polymerase I [EC:2.7.7.7] D P344_06035 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D P344_06100 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D P344_04070 hypothetical protein K03703 uvrC; excinuclease ABC subunit C D P344_01855 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D P344_00360 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D P344_00370 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D P344_01805 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D P344_01345 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta D P344_03100 hypothetical protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D P344_03105 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D P344_05585 hypothetical protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D P344_04935 hypothetical protein K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D P344_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D P344_00805 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D P344_00060 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D P344_00040 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D P344_00195 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D P344_03875 hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D P344_02890 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D P344_00050 hypothetical protein K06187 recR; recombination protein RecR D P344_00025 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D P344_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D P344_01535 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D P344_05430 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta D P344_04435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D P344_02225 ribonucleotide-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D P344_04445 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D P344_00260 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:smia03029] D P344_05820 hypothetical protein K02519 infB; translation initiation factor IF-2 D P344_04085 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D P344_04180 hypothetical protein K02357 tsf; elongation factor Ts D P344_00390 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D P344_00385 fusA; elongation factor P K02355 fusA; elongation factor G D P344_03840 hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D P344_04920 era; GTPase Era K03595 era; GTPase D P344_06230 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D P344_01115 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D P344_03320 hypothetical protein K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D P344_04905 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D P344_05215 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D P344_06385 hypothetical protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D P344_06380 hypothetical protein K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D P344_06390 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D P344_00195 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D P344_00975 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D P344_00970 hypothetical protein K03687 GRPE; molecular chaperone GrpE D P344_00980 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ D P344_07095 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:smia02000] D P344_06075 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D P344_04015 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D P344_00780 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D P344_00775 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D P344_00770 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D P344_00330 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins D P344_00340 hypothetical protein K23535 nupB; general nucleoside transport system permease protein D P344_00345 hypothetical protein K23536 nupC; general nucleoside transport system permease protein D P344_00335 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein D P344_05890 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D P344_05885 hypothetical protein K02037 pstC; phosphate transport system permease protein D P344_05880 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D P344_02375 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component D P344_01605 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D P344_01595 cbiO; cobalt ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D P344_01600 cbiO; cobalt ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D P344_04300 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D P344_03650 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D P344_03755 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D P344_03765 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D P344_04615 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D P344_04810 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D P344_04825 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_03655 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_03760 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_04285 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_04385 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_02325 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_03390 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_04680 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D P344_01825 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D P344_06900 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D P344_06960 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D P344_00155 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D P344_01160 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D P344_00145 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D P344_06615 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D P344_06485 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D P344_01865 hypothetical protein K02784 ptsH; phosphocarrier protein HPr D P344_06405 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D P344_05790 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D P344_06185 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D P344_01135 hypothetical protein K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199] D P344_06920 hypothetical protein K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D P344_02190 hypothetical protein K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192] D P344_00415 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D P344_06785 hypothetical protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D P344_01970 hypothetical protein K11200 mngA; 2-O-A-mannosyl-D-glycerate PTS system EIIABC component [EC:2.7.1.195] D P344_00535 hypothetical protein K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D P344_06220 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D P344_00475 hypothetical protein K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D P344_04790 hypothetical protein K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D P344_05850 hypothetical protein K02440 glpF; glycerol uptake facilitator D P344_05065 hypothetical protein K06212 focA; formate transporter D P344_04045 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D P344_03750 hypothetical protein K12686 apeE; outer membrane lipase/esterase D P344_03225 hypothetical protein K19540 frlA; fructoselysine transporter D P344_05500 hypothetical protein K07301 yrbG; cation:H+ antiporter D P344_06360 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein D P344_06365 hypothetical protein K03499 trkA; trk/ktr system potassium uptake protein D P344_02625 hypothetical protein K23675 fmnP; riboflavin transporter D P344_02990 hypothetical protein K16789 thiT; thiamine transporter D P344_01635 hypothetical protein K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:smia02044] D P344_00320 hypothetical protein K08086 fimV; pilus assembly protein FimV D P344_04205 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D P344_02250 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D P344_02260 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC D P344_03750 hypothetical protein K12686 apeE; outer membrane lipase/esterase D P344_06065 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D P344_02905 hypothetical protein K12257 secDF; SecD/SecF fusion protein D P344_00645 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D P344_01775 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D P344_04980 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D P344_00715 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D P344_07095 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:smia02042] D P344_04045 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:smia04812] D P344_07030 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07050 hypothetical protein K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07065 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07070 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_02665 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_04245 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D P344_04250 hypothetical protein K03590 ftsA; cell division protein FtsA D P344_01250 sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein D P344_01255 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:smia04147] D P344_05490 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D P344_05980 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D P344_06080 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D P344_04160 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D P344_00975 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D P344_01545 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D P344_07145 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D P344_00390 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D P344_06630 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D P344_01780 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D P344_02910 hypothetical protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D P344_01955 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D P344_06050 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:smia02048] D P344_00700 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 D P344_04245 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D P344_07030 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07050 hypothetical protein K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07065 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_07070 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_02665 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D P344_03385 hypothetical protein K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D P344_03375 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:smia03100] D P344_01625 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D P344_05665 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D P344_02635 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D P344_05675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D P344_01025 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D P344_05640 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D P344_05680 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D P344_03440 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D P344_03965 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D P344_01030 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D P344_03950 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D P344_00435 tRNA-His K14226 tRNA-His; tRNA His D P344_01620 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D P344_01050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D P344_03955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D P344_05755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D P344_01045 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D P344_03960 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D P344_05645 tRNA-Met K14230 tRNA-Met; tRNA Met D P344_05660 tRNA-Met K14230 tRNA-Met; tRNA Met D P344_05655 tRNA-Met K14230 tRNA-Met; tRNA Met D P344_05635 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D P344_05670 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D P344_05650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D P344_06280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D P344_06335 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D P344_01040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D P344_03975 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D P344_06285 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D P344_03970 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D P344_01035 tRNA-Val K14237 tRNA-Val; tRNA Val D P344_03980 tRNA-Val K14237 tRNA-Val; tRNA Val D P344_06290 tRNA-Trp K14238 tRNA-Sec; tRNA Sec D P344_03920 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D P344_03915 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D P344_03910 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D P344_03555 azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D P344_02555 hypothetical protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D P344_02945 hypothetical protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D P344_06645 hypothetical protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D P344_05000 hypothetical protein K02217 ftnA; ferritin [EC:1.16.3.2] D P344_05265 hypothetical protein K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D P344_00870 hypothetical protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D P344_06650 hypothetical protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D P344_06090 hypothetical protein K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D P344_05030 hypothetical protein K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D P344_05685 dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18] D P344_06095 hypothetical protein K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D P344_03745 hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-] D P344_07075 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D P344_07025 hypothetical protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8] D P344_05235 hypothetical protein K01462 PDF; peptide deformylase [EC:3.5.1.88] D P344_02030 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D P344_06935 hypothetical protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D P344_06200 hypothetical protein K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D P344_02135 hypothetical protein K05337 fer; ferredoxin D P344_06595 hypothetical protein K04488 iscU; nitrogen fixation protein NifU and related proteins C 99983 Lipid metabolism D P344_06270 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D P344_04440 hypothetical protein K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D P344_03565 hypothetical protein K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation D P344_01540 RNA-binding protein S1 K07570 GSP13; general stress protein 13 C 99975 Protein processing D P344_02645 hypothetical protein K03545 tig; trigger factor D P344_00655 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D P344_03860 hypothetical protein K07461 K07461; putative endonuclease D P344_05425 hypothetical protein K02086 dnaD; DNA replication protein D P344_04645 hypothetical protein K07478 ycaJ; putative ATPase D P344_02120 hypothetical protein K07482 K07482; transposase, IS30 family D P344_03405 hypothetical protein K07482 K07482; transposase, IS30 family C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D P344_02690 hypothetical protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D P344_02785 hypothetical protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D P344_04460 hypothetical protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins C 99992 Structural proteins C 99994 Others D P344_05875 hypothetical protein K02039 phoU; phosphate transport system protein D P344_05580 hypothetical protein K06201 cutC; copper homeostasis protein B B 09194 Poorly characterized C 99996 General function prediction only D P344_06260 hypothetical protein K06878 K06878; tRNA-binding protein D P344_06590 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D P344_03575 hypothetical protein K04750 phnB; PhnB protein D P344_00395 hypothetical protein K03744 lemA; LemA protein D P344_03815 hypothetical protein K01421 yhgE; putative membrane protein C 99997 Function unknown D P344_01340 hypothetical protein K06885 K06885; uncharacterized protein D P344_03220 hypothetical protein K06889 K06889; uncharacterized protein D P344_04555 hypothetical protein K06889 K06889; uncharacterized protein D P344_00210 hypothetical protein K06956 K06956; uncharacterized protein D P344_05350 hypothetical protein K07124 K07124; uncharacterized protein D P344_00720 hypothetical protein K09787 K09787; uncharacterized protein D P344_03355 membrane protein K09976 K09976; uncharacterized protein D P344_02420 hypothetical protein K07584 ysxB; uncharacterized protein D P344_00465 hypothetical protein K07586 ygaC; uncharacterized protein D P344_05830 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024