+D GENES KO
#
KEGG Orthology (KO) - Streptococcus macedonicus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:smn00010]
D SMA_1164 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_0546 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_2064 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMA_0295 fba; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMA_1519 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMA_1891 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMA_1890 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMA_0606 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMA_1460 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMA_0902 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMA_0796 acoA; Acetoin dehydrogenase E1 component alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMA_0797 Acetoin dehydrogenase E1 component beta-subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMA_0798 acoC; Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_1048 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_1277 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_0243 adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMA_1040 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMA_0687 gapN; Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SMA_0927 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:smn00020]
D SMA_0652 citZ; Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D SMA_0651 acn; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SMA_0653 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_0796 acoA; Acetoin dehydrogenase E1 component alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMA_0797 Acetoin dehydrogenase E1 component beta-subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMA_0798 acoC; Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:smn00030]
D SMA_2064 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMA_1900 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SMA_0422 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SMA_0844 rpiA; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SMA_1059 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SMA_0845 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SMA_1040 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMA_0023 prs1; Ribose-phosphate pyrophosphokinase 1 K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMA_0937 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMA_0687 gapN; Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SMA_0295 fba; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:smn00040]
D SMA_2054 cap4C; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMA_1900 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:smn00051]
D SMA_1803 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SMA_0182 pmi; Mannose-6-phosphate isomerase (EC 5.3.1.8) K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMA_0917 Mannitol operon activator, BglG family K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SMA_1244 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SMA_0295 fba; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMA_1519 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMA_1243 fruA; PTS system, fructose-specific IIA component/PTS system, fructose-specific IIB component/PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMA_0378 manX; PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMA_0128 manY; PTS system, fructose-and mannose-inducible IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0377 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0376 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:smn00052]
D SMA_0223 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SMA_0224 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SMA_0225 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMA_2054 cap4C; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMA_1040 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMA_1164 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_0546 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_0861 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SMA_0216 aga; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SMA_0200 lacC; Tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SMA_1161 lacC; Tagatose-6-phosphate kinase (EC 2.7.1.144) K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMA_0201 lacD2; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMA_1160 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMA_0198 lacA; Galactose-6-phosphate isomerase, LacA subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SMA_0199 lacB1; Galactose-6-phosphate isomerase, LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SMA_1162 lacB; Galactose-6-phosphate isomerase, LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SMA_1163 lacA1; Galactose-6-phosphate isomerase, LacA subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SMA_0207 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SMA_0211 lacG2; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SMA_1157 lacG2; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SMA_0209 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMA_1159 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMA_0210 lacE; PTS system, lactose-specific IIB component/PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMA_1158 lacE; PTS system, lactose-specific IIB component/PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMA_1805 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SMA_0126 PTS system, fructose-and mannose-inducible IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:smn00500]
D SMA_1804 scrA; PTS system, sucrose-specific IIB component/PTS system, sucrose-specific IIC component/PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SMA_1805 scrB; Sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SMA_0220 gtfA; Sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D SMA_2054 cap4C; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMA_0927 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SMA_1331 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SMA_0972 amyA; Cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SMA_1332 malQ; 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SMA_0173 PTS system, maltose and glucose-specific IIC IIB and IIA components K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SMA_0174 Exodeoxyribonuclease III K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D SMA_1040 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMA_1164 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_0546 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_2064 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMA_1803 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:smn00520]
D SMA_0415 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SMA_0627 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SMA_1803 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SMA_0904 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMA_1454 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SMA_1631 glmU; N-acetylglucosamine-1-phosphate uridyltransferase/Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SMA_0731 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMA_0710 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMA_1132 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMA_1164 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_0546 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_1040 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMA_2054 cap4C; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMA_0223 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SMA_0224 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SMA_0225 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMA_0861 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SMA_0378 manX; PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMA_0128 manY; PTS system, fructose-and mannose-inducible IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0377 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0376 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SMA_2064 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMA_0182 pmi; Mannose-6-phosphate isomerase (EC 5.3.1.8) K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:smn00620]
D SMA_0796 acoA; Acetoin dehydrogenase E1 component alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMA_0797 Acetoin dehydrogenase E1 component beta-subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMA_0798 acoC; Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_1854 pfl; Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SMA_0243 adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMA_0100 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SMA_0942 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMA_0902 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMA_0373 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMA_0369 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMA_0371 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMA_0372 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMA_1721 acyP; Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SMA_1048 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_1277 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_0239 yyaH; Possible glyoxylase family protein (Lactoylglutathione lyase) K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SMA_1502 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SMA_1946 mleS; Malolactic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D SMA_1525 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMA_0698 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:smn00630]
D SMA_0652 citZ; Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D SMA_0651 acn; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SMA_2160 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SMA_1887 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMA_0967 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_1462 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:smn00640]
D SMA_0100 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SMA_0942 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_1854 pfl; Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SMA_0373 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMA_0369 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMA_0371 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMA_0372 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMA_0652 citZ; Citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D SMA_1048 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_1277 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:smn00650]
D SMA_0243 adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMA_0829 ssdA; Succinate-semialdehyde dehydrogenase [NAD]; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMA_1854 pfl; Pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SMA_1188 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SMA_0334 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0772 alsS; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0335 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMA_0773 aldC; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:smn00660]
D SMA_0334 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0772 alsS; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0335 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMA_0773 aldC; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SMA_0701 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SMA_0702 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SMA_0699 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:smn00562]
D SMA_1083 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SMA_1632 yulF; NAD-dependent oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-]
D SMA_1519 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:smn00190]
D SMA_0726 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SMA_0728 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SMA_0727 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SMA_0725 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SMA_0729 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SMA_0723 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SMA_0724 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SMA_0722 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SMA_1957 atpB; V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D SMA_1956 atpD; V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D SMA_1959 Hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D SMA_0881 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SMA_1686 ppaC; Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:smn00710]
D SMA_1890 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMA_1891 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMA_0295 fba; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMA_0422 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SMA_0844 rpiA; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SMA_1519 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMA_1900 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SMA_1525 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:smn00720]
D SMA_1525 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMA_0653 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SMA_0651 acn; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SMA_0373 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMA_0369 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMA_0371 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMA_0372 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMA_1035 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SMA_0581 folD; Methylenetetrahydrofolate dehydrogenase (NADP+)/Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SMA_0942 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMA_0100 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:smn00680]
D SMA_0967 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMA_1460 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMA_1525 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMA_0295 fba; Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMA_0100 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SMA_0942 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMA_0606 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMA_1651 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMA_1653 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMA_1472 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:smn00910]
D SMA_1226 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SMA_1887 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMA_1886 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMA_1885 gltB; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SMA_2047 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:smn00920]
D SMA_0683 nrnA; 3'-to-5' oligoribonuclease A, Bacillus type K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SMA_0248 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SMA_0467 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMA_0756 metA; Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SMA_1674 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:smn00061]
D SMA_0373 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMA_0369 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMA_0371 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMA_0372 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMA_0027 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SMA_0364 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SMA_0366 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMA_0363 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SMA_0368 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMA_0367 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMA_1635 3-Ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMA_0370 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMA_0365 Enoyl-[acyl-carrier-protein] reductase [FMN] K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SMA_0361 paaG; Trans-2,cis-3-Decenoyl-ACP isomerase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D SMA_0243 adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:smn00074]
D SMA_1799 acpS; Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SMA_0027 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SMA_0364 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SMA_0366 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:smn00561]
D SMA_1462 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SMA_0026 plsX; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SMA_0887 plsY; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SMA_0619 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SMA_0718 dagK; Transcription regulator [contains diacylglycerol kinase catalytic domain] K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SMA_1586 Glycosyltransferase LafA, responsible for the formation of Glc-DAG K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SMA_1587 Glycosyltransferase LafB, responsible for the formation of Gal-Glc-DAG K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SMA_1287 ltaS1; Lipoteichoic acid synthase LtaS Type IIc K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SMA_0216 aga; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:smn00564]
D SMA_2053 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SMA_0887 plsY; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SMA_0619 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SMA_0718 dagK; Transcription regulator [contains diacylglycerol kinase catalytic domain] K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SMA_1789 yhdW; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SMA_0229 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SMA_2166 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SMA_1034 cls; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:smn00600]
D SMA_0216 aga; Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:smn00230]
D SMA_1630 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SMA_0845 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SMA_1040 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMA_0023 prs1; Ribose-phosphate pyrophosphokinase 1 K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMA_0937 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMA_0030 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SMA_0106 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SMA_0032 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SMA_0029 purL; Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SMA_0031 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SMA_0109 purK; Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SMA_0108 purE; Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SMA_0028 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SMA_0111 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SMA_0034 purH; IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMA_0755 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SMA_0846 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMA_0850 deoD; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMA_0014 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SMA_2183 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SMA_1445 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SMA_1713 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SMA_0958 xpt; Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SMA_0847 yfeJ; Glutamine amidotransferase, class I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMA_0977 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMA_0953 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SMA_0455 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SMA_0490 nrdE; Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMA_0649 nrdE; Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMA_0491 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_0493 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_0648 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_2105 nrdD; Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SMA_0193 relA; GTP pyrophosphokinase, (p)ppGpp synthetase I K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SMA_1214 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SMA_0939 yjbM; GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SMA_2082 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SMA_1490 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SMA_0071 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:smn00240]
D SMA_1260 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMA_1261 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMA_1262 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SMA_0886 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SMA_0879 pyrDB; Dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D SMA_0878 pyrK; Dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D SMA_0601 pyrD; Dihydroorotate dehydrogenase, catalytic subunit K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D SMA_0882 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SMA_0880 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SMA_1620 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SMA_1445 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SMA_0292 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SMA_1293 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SMA_0697 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SMA_0825 2-haloalkanoic acid dehalogenase K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D SMA_1672 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SMA_1264 pyrR; Uracil phosphoribosyltransferase/Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SMA_2105 nrdD; Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SMA_0490 nrdE; Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMA_0649 nrdE; Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMA_0491 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_0493 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_0648 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_1810 comEB; dCMP deaminase; Late competence protein ComEB K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SMA_1661 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SMA_2050 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SMA_0963 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SMA_1187 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SMA_0943 Short chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:smn00250]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1792 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SMA_0511 asnA; Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SMA_1494 Aspartate aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D SMA_0639 Aliphatic amidase AmiE K13566 NIT2; omega-amidase [EC:3.5.1.3]
D SMA_1788 yfbQ; Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMA_2038 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMA_2037 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMA_2082 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SMA_0111 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SMA_1262 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SMA_0829 ssdA; Succinate-semialdehyde dehydrogenase [NAD]; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMA_1886 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMA_1885 gltB; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SMA_1226 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SMA_1887 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMA_1260 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMA_1261 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMA_0904 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMA_0030 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:smn00260]
D SMA_0359 yclM; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMA_1033 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMA_1146 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMA_1145 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SMA_0041 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SMA_0967 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMA_1462 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SMA_0606 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMA_1651 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMA_1653 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMA_1472 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SMA_0943 Short chain dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_2158 sdaAB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SMA_2159 sdaAA; L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SMA_0337 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMA_0541 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SMA_0540 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:smn00270]
D SMA_0248 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SMA_0467 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMA_1673 Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SMA_1181 ybgG; Homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D SMA_1241 5,10-methylenetetrahydrofolate reductase/Homolog of homocysteine-binding domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SMA_1242 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SMA_0709 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SMA_1628 mtnN; 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SMA_0640 mtnE; Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D SMA_0703 ytsP; GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SMA_1430 Modification methylase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMA_0453 luxS; S-ribosylhomocysteine lyase/Autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SMA_0359 yclM; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMA_1033 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMA_1146 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMA_1145 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SMA_0756 metA; Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SMA_1674 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SMA_1099 O-acetylhomoserine sulfhydrylase/O-succinylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SMA_0891 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMA_2083 gshAB; Glutathione biosynthesis bifunctional protein gshAB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1048 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_1277 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_2158 sdaAB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SMA_2159 sdaAA; L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SMA_1651 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMA_1653 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:smn00280]
D SMA_0891 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_1188 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:smn00290]
D SMA_0337 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMA_0701 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SMA_0702 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SMA_0699 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SMA_0334 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0772 alsS; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0335 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMA_0336 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SMA_0333 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMA_2133 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMA_0891 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMA_1788 yfbQ; Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMA_0698 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:smn00300]
D SMA_1146 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMA_0359 yclM; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMA_1033 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMA_1032 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SMA_1236 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SMA_2059 dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SMA_0644 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SMA_1759 dapE; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SMA_1717 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SMA_0024 patA; Aromatic amino acid aminotransferase gamma K00841 patA; aminotransferase [EC:2.6.1.-]
D SMA_2057 dapL; N-acetyl-L,L-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SMA_0613 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:smn00310]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_0829 ssdA; Succinate-semialdehyde dehydrogenase [NAD]; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:smn00220]
D SMA_0574 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SMA_2038 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMA_2037 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMA_1887 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMA_1260 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMA_1261 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMA_1226 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1788 yfbQ; Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMA_0642 argJ; Glutamate N-acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D SMA_0643 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SMA_0641 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SMA_0644 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:smn00330]
D SMA_0112 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SMA_0426 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SMA_0427 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:smn00340]
D SMA_1474 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SMA_1475 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D SMA_1466 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D SMA_1467 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D SMA_1469 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SMA_1470 hisH; Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SMA_1468 hisF; Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SMA_1471 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SMA_1476 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMA_0740 Histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D SMA_1473 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SMA_1833 ifcA; Fumarate reductase flavoprotein subunit K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism [PATH:smn00350]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1476 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMA_0243 adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMA_0829 ssdA; Succinate-semialdehyde dehydrogenase [NAD]; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:smn00360]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1476 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smn00400]
D SMA_1800 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMA_1801 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMA_1281 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SMA_1283 aroD; 3-dehydroquinate dehydratase I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SMA_1438 aroK; Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SMA_1439 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SMA_1280 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SMA_0535 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMA_0536 trpG; Anthranilate synthase, amidotransferase Component, Para-aminobenzoate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SMA_0537 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SMA_0539 trpF; Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SMA_0538 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SMA_0541 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SMA_0540 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SMA_1485 Chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D SMA_1279 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SMA_1437 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1476 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:smn00430]
D SMA_0942 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMA_0100 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:smn00450]
D SMA_1674 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SMA_1673 Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SMA_1241 5,10-methylenetetrahydrofolate reductase/Homolog of homocysteine-binding domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SMA_1242 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SMA_0349 csd; Cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SMA_0439 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SMA_1640 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:smn00460]
D SMA_1792 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SMA_0511 asnA; Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SMA_0967 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:smn00470]
D SMA_1798 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMA_0611 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMA_1952 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMA_1950 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMA_1714 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SMA_0558 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SMA_1717 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:smn00480]
D SMA_2083 gshAB; Glutathione biosynthesis bifunctional protein gshAB K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SMA_1066 pepN; Lysyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SMA_1078 gor; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SMA_0653 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SMA_1527 gpo; Glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:smn00542]
D SMA_0346 tagO; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:smn00541]
D SMA_2054 cap4C; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMA_0225 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMA_0861 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SMA_0762 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMA_0764 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMA_0763 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMA_0875 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SMA_1318 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SMA_0182 pmi; Mannose-6-phosphate isomerase (EC 5.3.1.8) K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SMA_1631 glmU; N-acetylglucosamine-1-phosphate uridyltransferase/Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:smn00550]
D SMA_0731 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMA_0710 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMA_1132 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMA_1734 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SMA_0558 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SMA_0611 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMA_0613 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SMA_1610 dgkA; Diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SMA_0228 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SMA_0344 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMA_1695 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMA_0432 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMA_0559 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMA_0443 ponA; Multimodular transpeptidase-transglycosylase/Penicillin-binding protein 1A/1B (PBP1) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMA_0146 pbpF; Multimodular transpeptidase-transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMA_0352 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMA_0279 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMA_1676 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SMA_1457 Hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SMA_1458 putative amidotransferase similar to cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SMA_1515 UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SMA_1639 femB; Aminoacyltransferase FemB K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SMA_1516 tRNA-dependent lipid II-Ala--L-alanine ligase K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SMA_0088 pbpF; Multimodular transpeptidase-transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D SMA_0609 Cell division protein FtsI [Peptidoglycan synthetase] K00687 pbp2B; penicillin-binding protein 2B
D SMA_0431 pbpX; Cell division protein FtsI [Peptidoglycan synthetase] K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:smn00552]
D SMA_0344 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMA_1695 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMA_0346 tagO; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SMA_1952 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMA_1950 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMA_1951 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMA_1949 dltD; Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D SMA_0385 brpA; Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2 K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SMA_1436 Cell envelope-related transcriptional Regulator, LytR family K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SMA_0855 Exopolysaccharide biosynthesis transcriptional activator EpsA K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SMA_1287 ltaS1; Lipoteichoic acid synthase LtaS Type IIc K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SMA_1586 Glycosyltransferase LafA, responsible for the formation of Glc-DAG K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D SMA_0346 tagO; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:smn00543]
D SMA_0346 tagO; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SMA_0248 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:smn00730]
D SMA_0936 iscS1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_1274 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_1273 Thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SMA_1100 thiE; Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SMA_1901 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SMA_1899 thiN; Thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SMA_0071 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:smn00740]
D SMA_0379 yitU; Hydrolase (HAD superfamily) K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SMA_1086 Riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SMA_1630 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:smn00750]
D SMA_0286 pdxK; Phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SMA_1030 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SMA_1653 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMA_0041 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SMA_1105 Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D SMA_1104 pdxT; Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:smn00760]
D SMA_1839 nadC; Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SMA_0440 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SMA_0846 punA; Purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMA_0850 deoD; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMA_1773 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SMA_0441 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SMA_0940 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SMA_0829 ssdA; Succinate-semialdehyde dehydrogenase [NAD]; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:smn00770]
D SMA_0334 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0772 alsS; Acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMA_0335 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMA_0336 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SMA_0333 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMA_2133 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMA_0254 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SMA_1062 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SMA_1037 Phosphopantothenoylcysteine synthetase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D SMA_1038 Phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D SMA_0515 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SMA_1607 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SMA_1799 acpS; Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SMA_0891 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:smn00780]
D SMA_0368 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMA_0367 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMA_1635 3-Ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMA_0370 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMA_0708 birA; Biotin-protein ligase/Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:smn00785]
D SMA_0804 lplA; Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_0796 acoA; Acetoin dehydrogenase E1 component alpha-subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMA_0797 Acetoin dehydrogenase E1 component beta-subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMA_0798 acoC; Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:smn00790]
D SMA_1136 folE; GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SMA_1134 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SMA_1133 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SMA_1135 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SMA_1186 dhfR; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SMA_1137 folC; Dihydrofolate synthase/Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SMA_1276 folC; Dihydrofolate synthase/Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SMA_1143 padB; Para-aminobenzoate synthase, aminase component/Aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SMA_1230 queD; Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SMA_1229 queE; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SMA_1231 queC; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SMA_1228 queF; NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:smn00670]
D SMA_1186 dhfR; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SMA_1035 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SMA_0581 folD; Methylenetetrahydrofolate dehydrogenase (NADP+)/Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SMA_0967 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMA_0032 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SMA_0034 purH; IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMA_1241 5,10-methylenetetrahydrofolate reductase/Homolog of homocysteine-binding domain K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SMA_1187 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SMA_2056 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:smn00900]
D SMA_0083 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SMA_1188 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SMA_1189 mvaA; Hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D SMA_1195 mvk; Mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SMA_1193 Phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D SMA_1194 Diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D SMA_1192 fni; Isopentenyl-diphosphate delta-isomerase, FMN-dependent K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SMA_0590 fps; Octaprenyl-diphosphate synthase/Dimethylallyltransferase/Geranyltranstransferase (farnesyldiphosphate synthase)/Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SMA_0228 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SMA_0422 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:smn00523]
D SMA_0762 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMA_0764 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMA_0763 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMA_0875 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SMA_1318 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D SMA_0534 Isochorismate pyruvate-lyase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D SMA_0764 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SMA_192 cah; Acetyl xylan esterase 1; Cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:smn00332]
D SMA_0426 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SMA_0427 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:smn00261]
D SMA_0359 yclM; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMA_1033 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMA_1032 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SMA_1236 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:smn00521]
D SMA_1164 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_0546 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_1040 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMA_1083 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SMA_0762 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMA_0764 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMA_0763 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMA_0875 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SMA_1318 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SMA_1164 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMA_0546 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:smn00525]
D SMA_0762 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMA_0764 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:smn00401]
D SMA_1279 tyrA; Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1476 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SMA_0535 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMA_0536 trpG; Anthranilate synthase, amidotransferase Component, Para-aminobenzoate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SMA_0366 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMA_0367 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMA_1635 3-Ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SMA_0027 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SMA_0364 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D SMA_0709 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:smn00362]
D SMA_0961 4-oxalocrotonate tautomerase; Xylose transport system permease protein xylH K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D SMA_0821 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation
D SMA_1721 acyP; Acylphosphate phosphohydrolase, putative K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:smn00625]
D SMA_0243 adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D SMA_0961 4-oxalocrotonate tautomerase; Xylose transport system permease protein xylH K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D SMA_0961 4-oxalocrotonate tautomerase; Xylose transport system permease protein xylH K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:smn00626]
D SMA_0243 adhE; Alcohol dehydrogenase; Acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:smn03020]
D SMA_0089 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMA_0090 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMA_0076 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMA_0456 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMA_0291 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:smn03010]
D SMA_0893 rps1; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D SMA_2093 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D SMA_0056 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D SMA_2151 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D SMA_0067 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D SMA_1820 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D SMA_1893 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SMA_0064 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D SMA_0256 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D SMA_0049 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D SMA_0075 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D SMA_1894 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D SMA_0074 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D SMA_0063 rpsH; SSU ribosomal protein S14p (S29e) Zinc-dependent K02954 RP-S14; small subunit ribosomal protein S14
D SMA_1875 rpsN; SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D SMA_0241 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D SMA_1252 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D SMA_0059 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D SMA_1818 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SMA_0054 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D SMA_1063 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D SMA_1324 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D SMA_1621 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D SMA_0053 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D SMA_0050 rplC; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D SMA_0051 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D SMA_0062 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D SMA_0065 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D SMA_1174 rplL; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SMA_2154 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D SMA_1175 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SMA_1622 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D SMA_0255 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D SMA_0060 rplN; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D SMA_0069 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D SMA_0057 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D SMA_0077 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D SMA_0066 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D SMA_1483 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D SMA_1290 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D SMA_1270 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D SMA_0055 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D SMA_0052 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D SMA_0061 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D SMA_1268 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D SMA_0330 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D SMA_0058 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D SMA_0068 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D SMA_0682 rpmE2; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SMA_2134 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SMA_0147 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMA_1605 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMA_2135 rpmG2; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMA_1960 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D SMA_1291 rpmI; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D SMA_0073 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SMA_rRNA_01 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_16 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_13 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_04 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_10 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_07 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_02 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_05 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_17 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_08 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_14 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_11 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_03 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_09 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_06 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_15 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_12 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_18 5S RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:smn00970]
D SMA_tRNA_01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_50 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_43 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_29 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_19 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_47 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_09 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_27 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_61 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_64 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_70 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_44 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMA_tRNA_48 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMA_tRNA_68 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMA_tRNA_03 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMA_tRNA_52 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMA_tRNA_21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMA_tRNA_67 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SMA_tRNA_40 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMA_tRNA_63 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMA_tRNA_60 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMA_tRNA_33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_62 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_57 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_69 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_16 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_31 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_07 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_25 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_39 tRNA-His K14226 tRNA-His; tRNA His
D SMA_tRNA_17 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMA_tRNA_56 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMA_tRNA_32 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMA_tRNA_08 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_41 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_05 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_23 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_54 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_45 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_04 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_22 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_53 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_42 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_14 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_12 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_35 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_11 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_15 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMA_tRNA_36 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMA_tRNA_10 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMA_tRNA_28 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMA_tRNA_49 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_66 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_18 tRNA-Pseudo-GCT K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_13 tRNA-Pseudo-TGA K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_34 tRNA-Pseudo-TGA K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_06 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_55 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_24 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_46 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_58 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_38 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SMA_tRNA_37 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMA_tRNA_59 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMA_tRNA_02 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_tRNA_20 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_tRNA_51 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_tRNA_30 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_2040 gltX; Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SMA_1781 gatA; Aspartyl-tRNA amidotransferase subunit A, Glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SMA_1780 gatB; Aspartyl-tRNA amidotransferase subunit B, Glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SMA_1782 gatC; Aspartyl-tRNA amidotransferase subunit C, Glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SMA_0635 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMA_2130 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMA_1492 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMA_0416 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMA_0417 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMA_1585 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMA_0374 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMA_0249 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMA_1640 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMA_0504 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMA_0152 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMA_0568 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMA_1534 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMA_2125 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMA_0231 proS; Prolyl-tRNA synthetase Bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMA_2131 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMA_0734 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMA_0736 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMA_0087 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMA_2184 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:smn03060]
D SMA_0070 secY; Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SMA_0148 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMA_1604 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMA_0227 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMA_1722 oxaA; Inner membrane protein translocase component YidC, OxaA protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_2035 Inner membrane protein translocase component YidC, short form OxaI-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_1802 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMA_1006 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMA_1560 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SMA_0903 spsB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMA_1850 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMA_1940 spsB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMA_1266 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:smn04122]
D SMA_0936 iscS1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_1274 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_2157 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SMA_1918 MccB-like protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SMA_1273 Thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:smn03018]
D SMA_1460 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMA_0246 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SMA_1603 rnr1; 3'-to-5' exoribonuclease RNase R 1 K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMA_0616 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMA_0454 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SMA_1883 Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMA_0788 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMA_0283 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMA_0134 groL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:smn03030]
D SMA_1872 polC; DNA polymerase III alpha subunit; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMA_0900 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMA_0232 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMA_0704 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMA_1660 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMA_0622 yqenN; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMA_2153 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SMA_1322 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SMA_0118 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1819 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D SMA_2013 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1023 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SMA_1849 rnhC; Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SMA_2077 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMA_0717 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:smn03410]
D SMA_0758 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SMA_0884 ung; Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SMA_1828 yfhQ; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SMA_1608 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SMA_1082 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SMA_1645 exoA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMA_2077 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMA_0747 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMA_0717 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:smn03420]
D SMA_0007 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SMA_1812 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SMA_1338 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SMA_0832 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SMA_1103 pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMA_2077 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMA_0717 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:smn03430]
D SMA_2122 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SMA_1846 mutS2; Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SMA_2121 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SMA_1103 pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMA_0588 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SMA_0589 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SMA_0747 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMA_0118 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1819 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D SMA_2013 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_0900 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMA_0232 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMA_0704 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMA_0622 yqenN; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMA_1660 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMA_1872 polC; DNA polymerase III alpha subunit; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMA_0717 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:smn03440]
D SMA_0747 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMA_0118 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1819 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D SMA_2013 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_2181 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SMA_0025 reqO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SMA_0610 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D SMA_2112 recA; RecA protein K03553 recA; recombination protein RecA
D SMA_2077 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMA_2120 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SMA_2101 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SMA_0263 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMA_1797 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMA_1851 yrrC; RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SMA_0900 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMA_0232 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMA_0704 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMA_0622 yqenN; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMA_1660 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMA_1872 polC; DNA polymerase III alpha subunit; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMA_0457 priA; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:smn03250]
D SMA_1626 ppiB; Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:smn02010]
D SMA_1128 potD; ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SMA_1129 potC; Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D SMA_1130 potB; Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D SMA_1131 potA; Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SMA_1363 Glycine betaine ABC transporter glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SMA_0325 opuBC; Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMA_1217 L-proline glycine betaine binding ABC transporter protein ProX/Osmotic adaptation K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMA_0324 opuCD; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D SMA_0326 opuCB; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D SMA_1215 L-proline glycine betaine binding ABC transporter protein ProX/Osmotic adaptation K05846 opuBD; osmoprotectant transport system permease protein
D SMA_1218 L-proline glycine betaine binding ABC transporter protein ProX/Osmotic adaptation K05846 opuBD; osmoprotectant transport system permease protein
D SMA_0327 opuCA; Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMA_1216 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMA_0196 msmK; Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMA_1334 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SMA_1335 Maltose/maltodextrin ABC transporter, permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMA_1336 Maltose/maltodextrin ABC transporter, permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMA_0217 msmE; Multiple sugar ABC transporter, substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SMA_0183 msmE; ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SMA_0218 msmF; Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SMA_0184 yurN; Sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SMA_0185 amyC; Sugar transport system permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SMA_0219 msmG; Multiple sugar ABC transporter, membrane-spanning permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SMA_1058 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SMA_1056 putative deoxyribose-specific ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D SMA_1055 putative deoxyribose-specific ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D SMA_1057 putative deoxyribose-specific ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SMA_0122 rbsB; Periplasmic fructose-binding protein component of signal transduction system LevT K10439 rbsB; ribose transport system substrate-binding protein
D SMA_1074 pstS1; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SMA_1869 pstS2; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SMA_1073 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D SMA_1868 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D SMA_1072 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D SMA_1867 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D SMA_1070 pstB1; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMA_1071 pstB2; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMA_1866 pstB3; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMA_1339 glnP; Glutamine ABC transporter, glutamine-binding protein/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D SMA_1340 Glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1572 Amino acid ABCtransporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SMA_1574 Amino acid ABC transporter integral membrane protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMA_1573 Amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMA_1571 Glutamate transport ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1761 tcyK; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMA_0435 patH; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMA_0436 yxeN; Cysteine ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SMA_0437 tcyN; ABC-type multidrug transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1197 Cysteine ABC transporter, substrate-binding protein K16956 tcyJ; L-cystine transport system substrate-binding protein
D SMA_1201 Hypothetical protein K16957 tcyK; L-cystine transport system substrate-binding protein
D SMA_1200 Hypothetical protein K16958 tcyL; L-cystine transport system permease protein
D SMA_1199 Hypothetical protein K16959 tcyM; L-cystine transport system permease protein
D SMA_1198 putative amino acid ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1327 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMA_1330 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMA_1329 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMA_0576 glnP; ABC transporter membrane-spanning permease-glutamine transport K17077 artQ; arginine/lysine/histidine transport system permease protein
D SMA_0577 Glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_0342 glnP; Amino acid ABC transporter, glutamine-binding protein/permease protein K17073 lysX1; putative lysine transport system substrate-binding protein
D SMA_0341 artM; Amino acid transport ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SMA_1667 livJ; Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SMA_1666 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D SMA_1665 livM; Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D SMA_1664 livG; Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SMA_1663 livF; Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SMA_1760 metQ; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SMA_1757 metI; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SMA_1758 metN; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SMA_0353 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_1347 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_0354 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMA_0355 dppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SMA_0356 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMA_0357 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMA_0672 adcA; Candidate zinc-binding lipoprotein AdcA K09815 znuA; zinc transport system substrate-binding protein
D SMA_0086 adcB; Zinc ABC transporter, inner membrane permease protein AdcB K09816 znuB; zinc transport system permease protein
D SMA_0085 adcC; Zinc ABC transporter, ATP-binding protein AdcC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SMA_1538 bioY; Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D SMA_2068 bioY; Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D SMA_0914 Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_1749 Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_2163 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_1007 Hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_2165 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMA_2164 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMA_2032 ABC-type multidrug transport system, permease component K11051 cylB; multidrug/hemolysin transport system permease protein
D SMA_2033 Zinc ABC transporter, ATP-binding protein ZnuC K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D SMA_1375 mcdE; putative ABC transporter involved in peptide antibiotic resistance, similar to ScnE K20460 nukE; lantibiotic transport system permease protein
D SMA_1374 mcdG; putative ABC transporter involved in peptide antibiotic resistance, similar to ScnG K20461 nukG; lantibiotic transport system permease protein
D SMA_1376 mcdF; putative ABC transporter involved in peptide antibiotic resistance, similar to ScnF K20459 nukF; lantibiotic transport system ATP-binding protein
D SMA_1014 ABC transporter ATP-binding protein K19084 braE; bacitracin transport system permease protein
D SMA_1015 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SMA_1504 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMA_1505 ftsE; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SMA_0526 yheI; ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0527 ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1233 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0970 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1222 Lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0792 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1221 Multidrug ABC exporter (DrugE2) family, ATP binding/membrane-spanning protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1232 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0971 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:smn02060]
D SMA_0686 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SMA_0685 ptsH; Phosphocarrier protein of PTS system K02784 ptsH; phosphocarrier protein HPr
D SMA_0173 PTS system, maltose and glucose-specific IIC IIB and IIA components K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SMA_1804 scrA; PTS system, sucrose-specific IIB component/PTS system, sucrose-specific IIC component/PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SMA_1123 bglP; PTS system, beta-glucoside-specific IIB component/PTS system, beta-glucoside-specific IIC component/PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SMA_1597 bglP; PTS system, beta-glucoside-specific IIB component/PTS system, beta-glucoside-specific IIC component/PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SMA_0209 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMA_1159 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMA_0210 lacE; PTS system, lactose-specific IIB component/PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMA_1158 lacE; PTS system, lactose-specific IIB component/PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMA_0378 manX; PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMA_0128 manY; PTS system, fructose-and mannose-inducible IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0377 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0376 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SMA_0126 PTS system, fructose-and mannose-inducible IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SMA_0202 PTS system, galactose-specific IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SMA_0203 PTS system, galactose-specific IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SMA_0204 PTS system, galactose-specific IIC component K20114 gatC; galactose PTS system EIIC component
D SMA_1243 fruA; PTS system, fructose-specific IIA component/PTS system, fructose-specific IIB component/PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMA_1244 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:smn03070]
D SMA_0148 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMA_1604 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMA_0070 secY; Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SMA_0227 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMA_1722 oxaA; Inner membrane protein translocase component YidC, OxaA protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_2035 Inner membrane protein translocase component YidC, short form OxaI-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_1802 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMA_1560 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SMA_1006 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMA_1424 Hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SMA_2009 Hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:smn02020]
D SMA_1863 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SMA_1864 phoB; Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SMA_1074 pstS1; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SMA_1869 pstS2; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SMA_2191 htrA; Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SMA_1580 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07775 resD; two-component system, OmpR family, response regulator ResD
D SMA_1569 Two-component sensor kinase SA14-24 K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SMA_1570 Two-component response regulator SA14-24 K07668 vicR; two-component system, OmpR family, response regulator VicR
D SMA_0001 dnaA; Replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SMA_1213 Two-component response regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D SMA_1014 ABC transporter ATP-binding protein K19084 braE; bacitracin transport system permease protein
D SMA_1015 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SMA_1012 Two-component system histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SMA_1013 Two-component response regulator YvcP K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SMA_1952 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMA_1951 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMA_1950 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMA_1949 dltD; Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D SMA_1212 Two component system histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1064 ciaH; Two component system sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1065 ciaR; Two component system response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SMA_0279 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMA_1741 Transmembrane histidine kinase CsrS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SMA_1742 Response regulator CsrR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SMA_1945 Malate Na(+) symporter K11616 maeN; malate:Na+ symporter
D SMA_1910 Histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SMA_1911 Response regulator of the competence regulon ComE K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SMA_0275 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX
D SMA_0358 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX
D SMA_0012 Hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SMA_0530 yvfT; putative sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMA_0531 yvfU; DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SMA_0463 vraS; Sensor histidine kinase VraS K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SMA_0464 Two component transcriptional regulator VraR K11618 liaR; two-component system, NarL family, response regulator LiaR
D SMA_0462 Transporter associated with VraSR K11622 liaF; lia operon protein LiaF
D SMA_0043 ydfJ; putative antibiotic transport-associated protein K11625 ydfJ; membrane protein YdfJ
D SMA_1403 Possible two-component sensor histidine kinase K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SMA_1402 Salavaricin two-component response regulator K14989 salR; two-component system, NarL family, secretion system response regulator SalR
D SMA_1655 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D SMA_1887 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMA_0037 yfkJ; Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:smn02024]
D SMA_0453 luxS; S-ribosylhomocysteine lyase/Autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SMA_0535 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMA_0536 trpG; Anthranilate synthase, amidotransferase Component, Para-aminobenzoate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SMA_1800 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMA_1801 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMA_1667 livJ; Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SMA_1666 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D SMA_1665 livM; Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D SMA_1664 livG; Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SMA_1663 livF; Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SMA_1990 Hypothetical protein K20276 bapA; large repetitive protein
D SMA_1910 Histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SMA_1911 Response regulator of the competence regulon ComE K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SMA_1212 Two component system histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1064 ciaH; Two component system sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1065 ciaR; Two component system response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SMA_0353 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_1347 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_0354 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMA_0355 dppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SMA_0356 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMA_0357 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMA_0105 Transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SMA_0275 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX
D SMA_0358 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX
D SMA_1927 Competence-stimulating peptide ABC transporter permease protein ComB K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SMA_0156 rgg; Positive transcriptional regulator, MutR family K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D SMA_0201 lacD2; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMA_1160 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMA_1722 oxaA; Inner membrane protein translocase component YidC, OxaA protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_2035 Inner membrane protein translocase component YidC, short form OxaI-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_0148 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMA_1604 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMA_0070 secY; Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SMA_0227 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMA_1802 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMA_1560 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SMA_1006 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D SMA_0122 rbsB; Periplasmic fructose-binding protein component of signal transduction system LevT K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:smn02040]
D SMA_1761 tcyK; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMA_0435 patH; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMA_1321 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SMA_1460 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:smn01501]
D SMA_0012 Hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SMA_0353 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_1347 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_0354 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMA_0355 dppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SMA_0356 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMA_0357 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMA_0443 ponA; Multimodular transpeptidase-transglycosylase/Penicillin-binding protein 1A/1B (PBP1) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMA_0088 pbpF; Multimodular transpeptidase-transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D SMA_0146 pbpF; Multimodular transpeptidase-transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMA_0609 Cell division protein FtsI [Peptidoglycan synthetase] K00687 pbp2B; penicillin-binding protein 2B
D SMA_0431 pbpX; Cell division protein FtsI [Peptidoglycan synthetase] K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:smn01502]
D SMA_0611 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMA_1798 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMA_0613 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SMA_0432 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMA_0559 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMA_0279 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:smn01503]
D SMA_2191 htrA; Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SMA_1626 ppiB; Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SMA_1952 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMA_1951 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMA_1950 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMA_1949 dltD; Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:smn01000]
C 01001 Protein kinases [BR:smn01001]
D SMA_1388 Hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SMA_0461 Serine/threonine protein kinase PrkC, regulator of stationary phase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SMA_0858 Tyrosine-protein kinase EpsD K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SMA_1863 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SMA_1569 Two-component sensor kinase SA14-24 K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SMA_1012 Two-component system histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SMA_1212 Two component system histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1064 ciaH; Two component system sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1741 Transmembrane histidine kinase CsrS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SMA_0530 yvfT; putative sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMA_0463 vraS; Sensor histidine kinase VraS K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SMA_1403 Possible two-component sensor histidine kinase K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SMA_1910 Histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:smn01009]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMA_0460 Protein serine/threonine phosphatase PrpC, regulation of stationary phase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SMA_1472 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:smn01002]
D SMA_1266 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SMA_0442 pepC; Aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D SMA_0847 yfeJ; Glutamine amidotransferase, class I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMA_0977 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMA_1764 yvdE; Glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D SMA_1300 Glucan-binding protein B, putative K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMA_0022 Secreted antigen GbpB/SagA/PcsB, putative peptidoglycan hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMA_0030 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SMA_1886 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMA_0904 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMA_1937 Sortase A, LPXTG specific K07284 srtA; sortase A [EC:3.4.22.70]
D SMA_1044 Sortase A, LPXTG specific K07284 srtA; sortase A [EC:3.4.22.70]
D SMA_0668 pepDA; Dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D SMA_0104 Membrane-bound protease, CAAX family K07052 K07052; CAAX protease family protein
D SMA_0752 Hypothetical protein K07052 K07052; CAAX protease family protein
D SMA_1923 Bacteriocin immunity protein BlpY K07052 K07052; CAAX protease family protein
D SMA_1426 Hypothetical protein K07052 K07052; CAAX protease family protein
D SMA_1066 pepN; Lysyl aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SMA_0630 pepB; Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SMA_2096 Neutral endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SMA_0279 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMA_0836 pepV; Xaa-His dipeptidase K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D SMA_1759 dapE; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SMA_1297 Tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SMA_2057 dapL; N-acetyl-L,L-diaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SMA_0713 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SMA_1811 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP-specific) K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SMA_0015 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SMA_0113 pepA; Glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D SMA_0175 yhfE; Deblocking aminopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D SMA_1744 htpX; Heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SMA_0230 yaeL; Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SMA_2191 htrA; Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SMA_0352 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMA_1669 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SMA_1862 pepX; Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D SMA_0516 ylbL; Lon-like protease with PDZ domain K07177 K07177; Lon-like protease
D SMA_1011 Pleiotropic regulator of exopolysaccharide synthesis, competence and biofilm formation Ftr, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88]
D SMA_0903 spsB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMA_1850 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMA_1940 spsB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMA_1544 Peptidase, U32 family large subunit [C1] K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:smn01003]
D SMA_1586 Glycosyltransferase LafA, responsible for the formation of Glc-DAG K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SMA_1587 Glycosyltransferase LafB, responsible for the formation of Gal-Glc-DAG K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SMA_0443 ponA; Multimodular transpeptidase-transglycosylase/Penicillin-binding protein 1A/1B (PBP1) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMA_0088 pbpF; Multimodular transpeptidase-transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D SMA_0146 pbpF; Multimodular transpeptidase-transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMA_0346 tagO; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:smn01005]
D SMA_0862 Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D SMA_1317 Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D SMA_1316 Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D SMA_1313 putative glycosyltransferase-possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide K12998 rgpE; glucosyltransferase [EC:2.4.1.-]
D SMA_1303 Lipopolysaccharide biosynthesis protein K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D SMA_1312 Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L-rhamnosyltransferase K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D SMA_0346 tagO; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SMA_1301 csbB; Bactoprenol glucosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:smn01011]
D SMA_0731 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMA_0710 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMA_1132 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMA_1734 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SMA_0558 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SMA_1676 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SMA_0611 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMA_1515 UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SMA_1639 femB; Aminoacyltransferase FemB K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SMA_1516 tRNA-dependent lipid II-Ala--L-alanine ligase K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SMA_1798 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMA_1714 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SMA_0432 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMA_0559 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMA_0344 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMA_1695 Membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMA_0443 ponA; Multimodular transpeptidase-transglycosylase/Penicillin-binding protein 1A/1B (PBP1) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMA_0088 pbpF; Multimodular transpeptidase-transglycosylase K03693 pbp1b; penicillin-binding protein 1B
D SMA_0146 pbpF; Multimodular transpeptidase-transglycosylase K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMA_0609 Cell division protein FtsI [Peptidoglycan synthetase] K00687 pbp2B; penicillin-binding protein 2B
D SMA_0431 pbpX; Cell division protein FtsI [Peptidoglycan synthetase] K12556 pbp2X; penicillin-binding protein 2X
D SMA_0352 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMA_0279 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMA_1300 Glucan-binding protein B, putative K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMA_0022 Secreted antigen GbpB/SagA/PcsB, putative peptidoglycan hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMA_1937 Sortase A, LPXTG specific K07284 srtA; sortase A [EC:3.4.22.70]
D SMA_1044 Sortase A, LPXTG specific K07284 srtA; sortase A [EC:3.4.22.70]
D SMA_1725 Protein YceG like K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:smn01004]
D SMA_0366 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMA_0363 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SMA_0368 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMA_0367 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMA_1635 3-Ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMA_0370 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMA_0365 Enoyl-[acyl-carrier-protein] reductase [FMN] K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SMA_0361 paaG; Trans-2,cis-3-Decenoyl-ACP isomerase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D SMA_0026 plsX; Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SMA_0887 plsY; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SMA_0619 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:smn01006]
D SMA_0590 fps; Octaprenyl-diphosphate synthase/Dimethylallyltransferase/Geranyltranstransferase (farnesyldiphosphate synthase)/Geranylgeranyl pyrophosphate synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SMA_0228 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SMA_0742 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:smn01007]
D SMA_2040 gltX; Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SMA_0087 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMA_2184 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SMA_0249 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMA_2125 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMA_1640 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMA_0568 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMA_0504 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMA_0152 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMA_1534 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMA_2130 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMA_1492 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMA_2131 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMA_0416 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMA_0417 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMA_0374 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMA_0231 proS; Prolyl-tRNA synthetase Bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMA_1585 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMA_0635 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMA_0734 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMA_0736 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMA_0157 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SMA_1788 yfbQ; Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMA_0640 mtnE; Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D SMA_0024 patA; Aromatic amino acid aminotransferase gamma K00841 patA; aminotransferase [EC:2.6.1.-]
D SMA_1476 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMA_1673 Aspartate aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SMA_0644 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SMA_0891 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMA_1143 padB; Para-aminobenzoate synthase, aminase component/Aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SMA_1653 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:smn00194]
D SMA_0729 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SMA_0728 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SMA_0727 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SMA_0726 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SMA_0725 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SMA_0724 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SMA_0722 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SMA_0723 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:smn03000]
D SMA_1430 Modification methylase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMA_p0003 ydeE; Transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D SMA_0827 yeiE; LysR family transcriptional regulator YeiE K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D SMA_0776 ybhD; Transcriptional regulators, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D SMA_0197 lacR; Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SMA_1165 lacR; Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SMA_1245 fruR; Transcriptional repressor of the fructose operon, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SMA_0222 galR; Galactose operon repressor, GalR-LacI family of transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMA_1333 malR; Maltose operon transcriptional repressor MalR, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMA_1588 ccpA; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMA_1806 scrR; Sucrose operon repressor ScrR, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SMA_0181 gmuR; Regulatory protein, GntR:Bacterial regulatory protein, GntR K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D SMA_0189 gmuR; Transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D SMA_0999 Transcriptional regulator in cluster with beta-lactamase, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D SMA_1107 Predicted transcriptional regulator of pyridoxine metabolism K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SMA_1778 slyA; Transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SMA_1223 Transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SMA_2144 Hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SMA_1888 glnR; Transcriptional regulator, repressor of the glutamine synthetase, MerR family K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D SMA_2073 perR; Peroxide stress regulator PerR, FUR family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SMA_0488 flp; Transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SMA_0484 flp; Transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SMA_0236 nsr; Predicted N-ribosylNicotinamide CRP-like regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D SMA_0309 cadC; Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D SMA_0603 ziaR; Transcriptional repressor smtb-like K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D SMA_0272 Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D SMA_1644 sdpR; Transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D SMA_1638 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D SMA_2145 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D SMA_1627 ideR; Iron-dependent transcriptional regulator IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SMA_0708 birA; Biotin-protein ligase/Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SMA_0105 Transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SMA_0156 rgg; Positive transcriptional regulator, MutR family K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D SMA_1896 purR; PurR: transcription regulator associated with purine metabolism K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SMA_0934 rex; Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) K01926 rex; redox-sensing transcriptional repressor
D SMA_1786 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D SMA_1793 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D SMA_1816 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D SMA_0101 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D SMA_2192 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMA_0206 lacT; Beta-glucoside bgl operon antiterminator, BglG family K02531 lacT; transcriptional antiterminator
D SMA_0592 argR2; Arginine repressor ArgR, putative K03402 argR; transcriptional regulator of arginine metabolism
D SMA_2124 argR2; Arginine repressor ArgR, putative K03402 argR; transcriptional regulator of arginine metabolism
D SMA_0281 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SMA_2089 ctsR; Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D SMA_1264 pyrR; Uracil phosphoribosyltransferase/Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SMA_1740 nrdR; Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D SMA_0275 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX
D SMA_0358 Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:smn03021]
D SMA_0076 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMA_0089 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMA_0090 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMA_0291 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SMA_0456 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMA_1321 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SMA_0398 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SMA_1807 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D SMA_0149 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SMA_1724 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:smn03019]
D SMA_1566 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMA_1883 Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMA_0788 Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMA_0454 Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SMA_1603 rnr1; 3'-to-5' exoribonuclease RNase R 1 K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMA_1897 CMP-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SMA_0616 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMA_0434 cshB; DEAD-box ATP-dependent RNA helicase CshB K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SMA_1460 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMA_0246 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SMA_0901 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMA_0283 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMA_0134 groL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMA_0665 hybJ; Hypothetical ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:smn03011]
D SMA_0893 rps1; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D SMA_2093 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D SMA_0056 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D SMA_2151 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D SMA_0067 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D SMA_1820 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D SMA_1893 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SMA_0064 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D SMA_0256 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D SMA_0049 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D SMA_0075 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D SMA_1894 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D SMA_0074 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D SMA_0063 rpsH; SSU ribosomal protein S14p (S29e) Zinc-dependent K02954 RP-S14; small subunit ribosomal protein S14
D SMA_1875 rpsN; SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D SMA_0241 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D SMA_1252 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D SMA_0059 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D SMA_1818 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SMA_0054 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D SMA_1063 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D SMA_1324 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D SMA_1621 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D SMA_0053 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D SMA_0050 rplC; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D SMA_0051 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D SMA_0062 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D SMA_0065 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D SMA_2154 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D SMA_1175 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SMA_1622 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D SMA_1174 rplL; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SMA_0255 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D SMA_0060 rplN; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D SMA_0069 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D SMA_0057 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D SMA_0077 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D SMA_0066 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D SMA_1483 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D SMA_1290 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D SMA_1270 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D SMA_0055 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D SMA_0052 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D SMA_0061 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D SMA_1268 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D SMA_0330 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D SMA_0058 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D SMA_0068 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D SMA_0682 rpmE2; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SMA_2134 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SMA_0147 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMA_1605 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMA_2135 rpmG2; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMA_1960 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D SMA_1291 rpmI; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D SMA_0073 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SMA_rRNA_03 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_09 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_06 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_15 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_12 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_18 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_01 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_16 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_13 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_04 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_10 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_07 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_02 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_05 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_17 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_08 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_14 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_11 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:smn03009]
D SMA_1566 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMA_1609 era; GTP-binding protein Era K03595 era; GTPase
D SMA_1344 obg; COG0536: GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D SMA_0398 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SMA_1807 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D SMA_0149 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SMA_0628 ytzG; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SMA_1346 Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SMA_1928 Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SMA_0459 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SMA_1061 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SMA_0514 ylbH; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SMA_0171 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SMA_1746 Methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SMA_0429 rsmH; rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SMA_1657 rsmI; rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SMA_1255 Protein-L-isoD(D-D) O-methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D SMA_0591 yqxC; RNA binding methyltransferase FtsJ like K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SMA_0251 yacO; TrmH family tRNA/rRNA methyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SMA_2190 rlmH; LSU m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SMA_1284 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SMA_0524 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SMA_1435 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SMA_1707 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SMA_0138 yhcT; Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SMA_0941 yjbO; Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SMA_1265 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SMA_1880 rimI; Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SMA_1249 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D SMA_0170 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SMA_2109 yggF; putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SMA_0250 mrnC; COG1939: Ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SMA_0616 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMA_0434 cshB; DEAD-box ATP-dependent RNA helicase CshB K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SMA_1901 Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SMA_1737 GTP-binding protein EngA K03977 engA; GTPase
D SMA_1024 rbgA; 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D SMA_0743 ynbA; GTP-binding protein YnbA K03665 hflX; GTPase
D SMA_1775 yqeH; GTP-binding protein YqeH, required for biogenesis of 30S ribosome subunit K06948 yqeH; 30S ribosome assembly GTPase
D SMA_0966 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SMA_0193 relA; GTP pyrophosphokinase, (p)ppGpp synthetase I K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SMA_0402 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SMA_0397 rimP; COG0779: clustered with transcription termination protein NusA K09748 rimP; ribosome maturation factor RimP
D SMA_2180 Hypothetical protein K14761 rlbA; ribosome-associated protein
D SMA_1771 Iojap-like protein K09710 ybeB; ribosome-associated protein
D SMA_1611 Metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D SMA_1774 yqeI; RNA binding protein K07574 yhbY; RNA-binding protein
D SMA_0471 yhbH; Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D SMA_0005 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D SMA_1743 COG1399 protein in cluster with ribosomal protein L32p, Firmicutes subfamily K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:smn03016]
D SMA_0745 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SMA_1235 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SMA_0231 proS; Prolyl-tRNA synthetase Bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMA_0568 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMA_0152 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMA_1640 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMA_2125 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMA_1534 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMA_2130 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMA_0635 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMA_1492 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMA_1585 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMA_0374 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMA_0249 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMA_0504 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMA_2131 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMA_0734 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMA_0736 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMA_0087 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMA_2184 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SMA_0194 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SMA_0387 hit; Histidine triad (HIT) nucleotide-binding protein, similarity with At5g48545 and yeast YDL125C (HNT1) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SMA_0391 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SMA_0285 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SMA_1087 truB; tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SMA_0936 iscS1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_1274 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_0966 YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SMA_0742 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SMA_0842 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SMA_2156 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SMA_2036 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SMA_0416 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMA_0417 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMA_2040 gltX; Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SMA_1530 Transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SMA_2066 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SMA_2087 dus1; tRNA dihydrouridine synthase 1 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SMA_1017 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SMA_1248 trmD; tRNA (Guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SMA_0759 putative tRNA-m1A22 methylase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SMA_1699 yibK; RNA methyltransferase, TrmH family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SMA_1720 rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D SMA_2157 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SMA_0625 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SMA_1231 queC; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SMA_1230 queD; Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SMA_1229 queE; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SMA_1228 queF; NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SMA_2052 Hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SMA_2070 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SMA_1273 Thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SMA_0013 tils; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SMA_1881 Inactive homolog of metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SMA_1879 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SMA_0383 ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SMA_1768 Hypothetical protein K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D SMA_1603 rnr1; 3'-to-5' exoribonuclease RNase R 1 K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMA_0246 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:smn03012]
D SMA_0401 infB; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D SMA_1292 infC; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D SMA_0790 ydiF; ABC transporter ATP-binding protein YdiF K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SMA_2092 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SMA_1520 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMA_1892 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D SMA_0964 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SMA_1619 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D SMA_0965 Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SMA_0006 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SMA_0072 infA; Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D SMA_1809 efp; Translation elongation factor P K02356 efp; elongation factor P
D SMA_1506 prfB; Peptide chain release factor 2; programmed frameshift-containing K02836 prfB; peptide chain release factor 2
D SMA_0615 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:smn03110]
D SMA_2088 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SMA_0571 clpE; ATP-dependent Clp protease, ATP-binding subunit ClpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D SMA_1178 clpC; putative ATP-dependent Clp proteinase (ATP-binding subunit) K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D SMA_1184 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SMA_0283 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMA_0134 groL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMA_0284 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SMA_2086 hslO; Chaperonin (heat shock protein 33) K04083 hslO; molecular chaperone Hsp33
D SMA_0282 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SMA_0133 groS; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SMA_2191 htrA; Serine protease, DegP/HtrA, do-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SMA_0015 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SMA_0723 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SMA_1626 ppiB; Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SMA_0465 ppiB; Streptococcal lipoprotein rotamase A; Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SMA_0634 prsA; Foldase protein PrsA 1 precursor K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SMA_1837 trxA; Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:smn04131]
D SMA_1445 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SMA_1891 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMA_0606 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMA_0902 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:smn03032]
D SMA_1430 Modification methylase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMA_0597 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SMA_0001 dnaA; Replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SMA_2153 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SMA_1322 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SMA_1739 Helicase loader DnaB K03346 dnaB; replication initiation and membrane attachment protein
D SMA_1738 dnaI; Helicase loader DnaI K11144 dnaI; primosomal protein DnaI
D SMA_0118 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1819 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D SMA_2013 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_0900 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMA_0232 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMA_0622 yqenN; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMA_1660 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMA_1872 polC; DNA polymerase III alpha subunit; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMA_0704 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMA_1023 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SMA_1849 rnhC; Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SMA_2077 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMA_0717 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SMA_1045 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SMA_1480 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SMA_0890 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMA_0889 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMA_1020 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SMA_2005 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:smn03036]
D SMA_1430 Modification methylase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMA_1566 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMA_0597 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SMA_0001 dnaA; Replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SMA_0544 dps; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D SMA_1565 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D SMA_1709 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SMA_1708 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SMA_0561 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SMA_0010 Cell division protein DivIC K13052 divIC; cell division protein DivIC
D SMA_1505 ftsE; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SMA_1624 ftsK; Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SMA_0430 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SMA_0560 divIB; Division initiation protein K03589 ftsQ; cell division protein FtsQ
D SMA_1524 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SMA_1504 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMA_0562 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMA_1479 ezrA; Septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D SMA_0567 divIVA; Cell division initiation protein DivIVA K04074 divIVA; cell division initiation protein
D SMA_0564 sepF; FtsZ-interacting protein related to cell division K09772 sepF; cell division inhibitor SepF
D SMA_0020 mreC; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SMA_0021 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SMA_1482 Cell division protein FtsW K05837 rodA; rod shape determining protein RodA
D SMA_2192 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMA_0890 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMA_0889 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMA_2156 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SMA_1746 Methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SMA_1017 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SMA_p0017 putative mobilization protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SMA_1183 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein
D SMA_0667 whiA; Cytoplasmic hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:smn03400]
D SMA_1649 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SMA_0884 ung; Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SMA_1828 yfhQ; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SMA_0758 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SMA_1337 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMA_1564 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMA_0570 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMA_0766 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMA_2050 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SMA_1082 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SMA_1608 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SMA_1645 exoA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMA_0747 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMA_0717 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SMA_2077 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMA_1812 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SMA_1338 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SMA_0832 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SMA_1103 pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMA_0089 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMA_0090 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMA_0076 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMA_0291 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SMA_0456 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMA_0007 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SMA_2122 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SMA_1846 mutS2; Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SMA_2121 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SMA_0588 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SMA_0589 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SMA_0900 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMA_0232 polC; DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMA_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMA_0622 yqenN; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMA_1660 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMA_1872 polC; DNA polymerase III alpha subunit; DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMA_0704 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMA_0118 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1819 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D SMA_2013 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1851 yrrC; RecD-like DNA helicase YrrC K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SMA_2112 recA; RecA protein K03553 recA; recombination protein RecA
D SMA_2120 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SMA_2101 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SMA_0457 priA; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SMA_2048 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SMA_2181 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SMA_0263 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMA_1797 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMA_0025 reqO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SMA_0610 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D SMA_0593 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SMA_0444 recU; Recombination protein RecU K03700 recU; recombination protein U
D SMA_0738 addA; ATP-dependent nuclease, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SMA_0737 rexB; ATP-dependent nuclease, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SMA_1443 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D SMA_1045 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SMA_1480 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SMA_1020 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SMA_0597 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SMA_1853 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SMA_1391 ImpB/MucB/SamB family protein K03502 umuC; DNA polymerase V
D SMA_1011 Pleiotropic regulator of exopolysaccharide synthesis, competence and biofilm formation Ftr, XRE family K01356 lexA; repressor LexA [EC:3.4.21.88]
D SMA_0475 recX; Regulatory protein RecX K03565 recX; regulatory protein
D SMA_1496 dinG; DnaQ family exonuclease/DinG family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SMA_0490 nrdE; Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMA_0649 nrdE; Ribonucleotide reductase of class Ib (aerobic), alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMA_0491 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_0493 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_0648 nrdF; Ribonucleotide reductase of class Ib (aerobic), beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMA_0683 nrnA; 3'-to-5' oligoribonuclease A, Bacillus type K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:smn03029]
D SMA_0401 infB; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D SMA_1292 infC; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D SMA_2092 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SMA_1520 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMA_1892 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D SMA_1609 era; GTP-binding protein Era K03595 era; GTPase
D SMA_0087 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMA_0152 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMA_2130 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMA_2125 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMA_1781 gatA; Aspartyl-tRNA amidotransferase subunit A, Glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SMA_1780 gatB; Aspartyl-tRNA amidotransferase subunit B, Glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SMA_1782 gatC; Aspartyl-tRNA amidotransferase subunit C, Glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SMA_0118 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_1819 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D SMA_2013 ssb2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMA_0283 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMA_0282 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SMA_0134 groL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMA_0133 groS; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SMA_0284 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SMA_0936 iscS1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_1274 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_1722 oxaA; Inner membrane protein translocase component YidC, OxaA protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_2035 Inner membrane protein translocase component YidC, short form OxaI-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:smn02000]
D SMA_0526 yheI; ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0527 ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1233 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0970 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1222 Lipid A export ATP-binding/permease protein MsbA K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0792 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1221 Multidrug ABC exporter (DrugE2) family, ATP binding/membrane-spanning protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1232 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_0971 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMA_1234 COG0488: ATPase components of ABC transporters with duplicated ATPase domains K15738 uup; ABC transport system ATP-binding/permease protein
D SMA_1128 potD; ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SMA_1129 potC; Spermidine Putrescine ABC transporter permease component potC K11070 potC; spermidine/putrescine transport system permease protein
D SMA_1130 potB; Spermidine Putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D SMA_1131 potA; Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SMA_1363 Glycine betaine ABC transporter glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SMA_0325 opuBC; Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMA_1217 L-proline glycine betaine binding ABC transporter protein ProX/Osmotic adaptation K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMA_0324 opuCD; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD K05846 opuBD; osmoprotectant transport system permease protein
D SMA_0326 opuCB; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D SMA_1215 L-proline glycine betaine binding ABC transporter protein ProX/Osmotic adaptation K05846 opuBD; osmoprotectant transport system permease protein
D SMA_1218 L-proline glycine betaine binding ABC transporter protein ProX/Osmotic adaptation K05846 opuBD; osmoprotectant transport system permease protein
D SMA_0327 opuCA; Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMA_1216 L-proline glycine betaine ABC transport system permease protein ProV K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMA_0196 msmK; Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMA_1334 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SMA_1335 Maltose/maltodextrin ABC transporter, permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMA_1336 Maltose/maltodextrin ABC transporter, permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMA_0217 msmE; Multiple sugar ABC transporter, substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SMA_0183 msmE; ABC-type sugar transport system, periplasmic component K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SMA_0218 msmF; Multiple sugar ABC transporter, membrane-spanning permease protein MsmF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SMA_0184 yurN; Sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SMA_0185 amyC; Sugar transport system permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SMA_0219 msmG; Multiple sugar ABC transporter, membrane-spanning permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SMA_0122 rbsB; Periplasmic fructose-binding protein component of signal transduction system LevT K10439 rbsB; ribose transport system substrate-binding protein
D SMA_1058 Nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D SMA_1056 putative deoxyribose-specific ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D SMA_1055 putative deoxyribose-specific ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D SMA_1057 putative deoxyribose-specific ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SMA_1361 ybbM; YbbM seven transmembrane helix protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D SMA_1360 ybbL; YbbL ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D SMA_0125 Periplasmic fructose-binding protein component of signal transduction system LevQ K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SMA_1074 pstS1; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SMA_1869 pstS2; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D SMA_1073 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D SMA_1868 Phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D SMA_1072 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D SMA_1867 Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D SMA_1070 pstB1; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMA_1071 pstB2; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMA_1866 pstB3; Phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMA_1339 glnP; Glutamine ABC transporter, glutamine-binding protein/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D SMA_1340 Glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1572 Amino acid ABCtransporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SMA_1574 Amino acid ABC transporter integral membrane protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMA_1573 Amino acid ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMA_1571 Glutamate transport ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1761 tcyK; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMA_0435 patH; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMA_0436 yxeN; Cysteine ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SMA_0437 tcyN; ABC-type multidrug transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1197 Cysteine ABC transporter, substrate-binding protein K16956 tcyJ; L-cystine transport system substrate-binding protein
D SMA_1201 Hypothetical protein K16957 tcyK; L-cystine transport system substrate-binding protein
D SMA_1200 Hypothetical protein K16958 tcyL; L-cystine transport system permease protein
D SMA_1199 Hypothetical protein K16959 tcyM; L-cystine transport system permease protein
D SMA_1198 putative amino acid ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1327 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMA_1330 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMA_1329 Amino acid ABC transporter, amino acid-binding/permease protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMA_0576 glnP; ABC transporter membrane-spanning permease-glutamine transport K17077 artQ; arginine/lysine/histidine transport system permease protein
D SMA_0577 Glutamine transport ATP-binding protein GlnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SMA_1667 livJ; Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SMA_1666 livH; High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D SMA_1665 livM; Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D SMA_1664 livG; Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SMA_1663 livF; Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SMA_1760 metQ; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SMA_1757 metI; Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SMA_1758 metN; Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SMA_0781 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D SMA_0131 ydeY; ABC transporter permease protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D SMA_0782 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D SMA_0132 phnC; Methionine ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D SMA_0783 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D SMA_0342 glnP; Amino acid ABC transporter, glutamine-binding protein/permease protein K17073 lysX1; putative lysine transport system substrate-binding protein
D SMA_0341 artM; Amino acid transport ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SMA_1138 Amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SMA_0921 Amino acid ABC transporter, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SMA_1763 tcyJ; Cysteine ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SMA_0919 ABC transporter membrane-spanning permease-glutamine transport K02029 ABC.PA.P; polar amino acid transport system permease protein
D SMA_1141 ABC transporter membrane-spanning permease-glutamine transport K02029 ABC.PA.P; polar amino acid transport system permease protein
D SMA_1140 glnP; Glutamine transport system permease protein GlnP K02029 ABC.PA.P; polar amino acid transport system permease protein
D SMA_1139 Amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SMA_0920 glnQ; ABC-type polar amino acid transport system, ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SMA_0353 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_1347 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMA_0354 oppB; Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMA_0355 dppC; Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SMA_0356 oppD; Oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMA_0357 oppF; Oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMA_1678 fhuD; Ferrichrome-binding periplasmic protein precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D SMA_1679 fhuB; ABC-type Fe3+-siderophore transport system, permease component K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D SMA_1680 fhuG; ABC-type Fe3+-siderophore transport system, permease 2 component K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D SMA_1677 fhuC; Ferrichrome transport ATP-binding protein FhuC K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D SMA_0801 Iron compound ABC uptake transporter substrate-binding protein PiuA K25282 yclQ; iron-siderophore transport system substrate-binding protein
D SMA_0800 Iron compound ABC uptake transporter ATP-binding protein PiuD K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D SMA_1690 abcX; ABC transporter ATP binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SMA_0672 adcA; Candidate zinc-binding lipoprotein AdcA K09815 znuA; zinc transport system substrate-binding protein
D SMA_0086 adcB; Zinc ABC transporter, inner membrane permease protein AdcB K09816 znuB; zinc transport system permease protein
D SMA_0085 adcC; Zinc ABC transporter, ATP-binding protein AdcC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SMA_1538 bioY; Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D SMA_2068 bioY; Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D SMA_1751 Substrate-specific component MtsA of methionine-regulated ECF transporter K16924 mtsT; energy-coupling factor transport system substrate-specific component
D SMA_0911 Substrate-specific component MtsA of methionine-regulated ECF transporter K16924 mtsT; energy-coupling factor transport system substrate-specific component
D SMA_0914 Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_1749 Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_2163 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_1007 Hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D SMA_2165 ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMA_2164 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMA_1750 Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMA_0913 Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMA_2032 ABC-type multidrug transport system, permease component K11051 cylB; multidrug/hemolysin transport system permease protein
D SMA_2033 Zinc ABC transporter, ATP-binding protein ZnuC K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D SMA_1376 mcdF; putative ABC transporter involved in peptide antibiotic resistance, similar to ScnF K20459 nukF; lantibiotic transport system ATP-binding protein
D SMA_1375 mcdE; putative ABC transporter involved in peptide antibiotic resistance, similar to ScnE K20460 nukE; lantibiotic transport system permease protein
D SMA_1374 mcdG; putative ABC transporter involved in peptide antibiotic resistance, similar to ScnG K20461 nukG; lantibiotic transport system permease protein
D SMA_1014 ABC transporter ATP-binding protein K19084 braE; bacitracin transport system permease protein
D SMA_1015 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SMA_1257 ABC transporter permease protein K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D SMA_1258 ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D SMA_1504 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMA_1505 ftsE; Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D SMA_0389 ecsB; ABC transporter, permease protein EscB K25157 ecsB; ABC-2 type transport system permease protein
D SMA_0388 ecsA; ABC transporter, ATP-binding protein EcsA K25158 ecsA; ABC-2 type transport system ATP-binding protein
D SMA_0425 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMA_1315 Rhamnose-containing polysacharide translocation permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMA_0529 yvfS; ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMA_0380 putative transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMA_1314 ABC-transporter (ATP-binding protein)-possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMA_0898 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMA_0424 natA; Methionine ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMA_0528 yvfR; putative ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMA_1406 bcrA; Bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMA_0839 ABC transporter permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D SMA_0840 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMA_0951 ABC transporter, ATP-binding protein Vex2 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMA_1094 ABC transporter ATP-binding protein YvcR K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMA_0347 sufC; Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SMA_0992 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D SMA_0042 norM; Multi antimicrobial extrusion (MATE) family transporter K26937 dinF; MATE family, multidrug efflux pump
D SMA_0142 oxlT; Major facilitator:Oxalate:Formate Antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D SMA_2039 Cyanate permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SMA_1606 pmrA; Multidrug resistance efflux pump PmrA K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SMA_0686 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SMA_0685 ptsH; Phosphocarrier protein of PTS system K02784 ptsH; phosphocarrier protein HPr
D SMA_0173 PTS system, maltose and glucose-specific IIC IIB and IIA components K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SMA_1804 scrA; PTS system, sucrose-specific IIB component/PTS system, sucrose-specific IIC component/PTS system, sucrose-specific IIA component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SMA_1123 bglP; PTS system, beta-glucoside-specific IIB component/PTS system, beta-glucoside-specific IIC component/PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SMA_1597 bglP; PTS system, beta-glucoside-specific IIB component/PTS system, beta-glucoside-specific IIC component/PTS system, beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SMA_1243 fruA; PTS system, fructose-specific IIA component/PTS system, fructose-specific IIB component/PTS system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMA_0209 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMA_1159 lacF; PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMA_0210 lacE; PTS system, lactose-specific IIB component/PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMA_1158 lacE; PTS system, lactose-specific IIB component/PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMA_0202 PTS system, galactose-specific IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SMA_0203 PTS system, galactose-specific IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SMA_0204 PTS system, galactose-specific IIC component K20114 gatC; galactose PTS system EIIC component
D SMA_0378 manX; PTS system, mannose-specific IIB component / PTS system, mannose-specific IIA component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMA_0128 manY; PTS system, fructose-and mannose-inducible IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0377 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMA_0376 manZ; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D SMA_0126 PTS system, fructose-and mannose-inducible IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SMA_1861 gla; Aquaporin (Major Intrinsic Protein Family) K02440 glpF; glycerol uptake facilitator
D SMA_0150 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family K10716 kch; voltage-gated potassium channel
D SMA_1656 nrgA; Ammonium transporter K03320 amt; ammonium transporter, Amt family
D SMA_1323 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D SMA_0289 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D SMA_1813 corA; Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D SMA_2044 Magnesium transporter, CorA family K03284 corA; magnesium transporter
D SMA_0646 Integral membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D SMA_1689 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SMA_0895 Antiholin-like protein LrgA K06518 cidA; holin-like protein
D SMA_1182 Amino acid permease K16235 mmuP; S-methylmethionine transporter
D SMA_1081 Predicted divalent heavy-metal cations transporter K07238 TC.ZIP; zinc transporter, ZIP family
D SMA_1590 Small multidrug resistance protein K03297 emrE; small multidrug resistance pump
D SMA_0605 sugE; Quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D SMA_1696 Bacterial/Archaeal Transporter family protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D SMA_2182 putative sugar uptake protein K05340 glcU; glucose uptake protein
D SMA_1144 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D SMA_1753 sstT; Serine/threonine transporter sstT K07862 sstT; serine/threonine transporter
D SMA_1691 nhaK; Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D SMA_1747 ktrB; Potassium uptake protein, integral membrane component, KtrB K03498 trkH; trk/ktr system potassium uptake protein
D SMA_1705 trkH; Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D SMA_1704 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D SMA_1748 ktrA; Potassium uptake protein, integral membrane component, KtrA K03499 trkA; trk/ktr system potassium uptake protein
D SMA_1263 pyrP; Uracil permease K02824 uraA; uracil permease
D SMA_0959 pbuX; Xanthine permease K16169 pbuX; xanthine permease
D SMA_0382 yieG; Guanine-hypoxanthine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D SMA_1127 clcA; Voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D SMA_0849 Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SMA_1484 Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SMA_0542 mntH; Manganese transport protein MntH K03322 mntH; manganese transport protein
D SMA_p0008 mntH; Manganese transport protein MntH K03322 mntH; manganese transport protein
D SMA_2078 Malate permease K24180 mleP; malate permease and related proteins
D SMA_1878 Branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump
D SMA_1877 Hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D SMA_1697 ribU; Substrate-specific component RibU of riboflavin ECF transporter K23675 fmnP; riboflavin transporter
D SMA_0647 thiT; Substrate-specific component ThiT of thiamin ECF transporter K16789 thiT; thiamine transporter
D SMA_0608 Substrate-specific component NiaX of predicted niacin ECF transporter K16788 niaX; niacin transporter
D SMA_1524 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SMA_1927 Competence-stimulating peptide ABC transporter permease protein ComB K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SMA_1259 Periplasmic component of efflux system K24950 yknX; membrane fusion protein, antimicrobial resistance system
D SMA_0858 Tyrosine-protein kinase EpsD K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SMA_0857 Tyrosine-protein kinase transmembrane modulator EpsC K19420 epsA; protein tyrosine kinase modulator
D SMA_0496 Nicotinamide mononucleotide transport (NMT) family protein K03811 pnuC; nicotinamide mononucleotide transporter
D SMA_0578 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D SMA_0579 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:smn02044]
D SMA_0565 Hypothetical protein K02221 yggT; YggT family protein
D SMA_0620 comEA; Late competence protein ComEA, DNA receptor K02237 comEA; competence protein ComEA
D SMA_1810 comEB; dCMP deaminase; Late competence protein ComEB K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SMA_0621 comEC; Late competence protein ComEC, DNA transport K02238 comEC; competence protein ComEC
D SMA_0469 ComF operon protein A, DNA transporter ATPase K02240 comFA; competence protein ComFA
D SMA_0470 comFC; ComF operon protein C K02242 comFC; competence protein ComFC
D SMA_0092 comGA; Late competence protein ComGA, access of DNA to ComEA K02243 comGA; competence protein ComGA
D SMA_0093 comGB; Late competence protein ComGB, access of DNA to ComEA K02244 comGB; competence protein ComGB
D SMA_0094 comGC; Late competence protein ComGC, access of DNA to ComEA K02245 comGC; competence protein ComGC
D SMA_0095 comGD; Late competence protein ComGD, access of DNA to ComEA K02246 comGD; competence protein ComGD
D SMA_0097 comGF; Late competence protein ComGF, access of DNA to ComEA K02248 comGF; competence protein ComGF
D SMA_0543 pppA; Late competence protein ComC, processing protease K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SMA_1424 Hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SMA_2009 Hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SMA_1802 secA; Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMA_0148 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMA_1604 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMA_0070 secY; Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SMA_1006 ffh; Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMA_1560 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SMA_0227 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMA_1722 oxaA; Inner membrane protein translocase component YidC, OxaA protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMA_2035 Inner membrane protein translocase component YidC, short form OxaI-like K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:smn02042]
D SMA_1689 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SMA_1191 yqfA; Hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:smn02022]
D SMA_1863 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SMA_1864 phoB; Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SMA_1580 Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07775 resD; two-component system, OmpR family, response regulator ResD
D SMA_1569 Two-component sensor kinase SA14-24 K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SMA_1570 Two-component response regulator SA14-24 K07668 vicR; two-component system, OmpR family, response regulator VicR
D SMA_1213 Two-component response regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D SMA_1012 Two-component system histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SMA_1013 Two-component response regulator YvcP K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SMA_1212 Two component system histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1064 ciaH; Two component system sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMA_1065 ciaR; Two component system response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SMA_1741 Transmembrane histidine kinase CsrS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SMA_1742 Response regulator CsrR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SMA_0530 yvfT; putative sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMA_0531 yvfU; DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SMA_0463 vraS; Sensor histidine kinase VraS K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SMA_0464 Two component transcriptional regulator VraR K11618 liaR; two-component system, NarL family, response regulator LiaR
D SMA_1403 Possible two-component sensor histidine kinase K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SMA_1402 Salavaricin two-component response regulator K14989 salR; two-component system, NarL family, secretion system response regulator SalR
D SMA_1910 Histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SMA_1911 Response regulator of the competence regulon ComE K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SMA_2031 Response regulator of the LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
C 02035 Bacterial motility proteins [BR:smn02035]
D SMA_1761 tcyK; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMA_0435 patH; Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:smn04812]
D SMA_0562 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMA_0561 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SMA_2192 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:smn04147]
D SMA_1460 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMA_1891 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMA_1890 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMA_0902 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMA_1626 ppiB; Peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SMA_0134 groL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMA_0283 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMA_2064 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMA_2183 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SMA_1520 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMA_0387 hit; Histidine triad (HIT) nucleotide-binding protein, similarity with At5g48545 and yeast YDL125C (HNT1) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SMA_1048 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_1277 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMA_0071 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SMA_0755 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SMA_2037 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMA_2038 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMA_0223 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SMA_1887 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMA_1651 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMA_0034 purH; IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMA_0799 lpdA; Dihydrolipoamide dehydrogenase of acetoin dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMA_1519 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMA_0606 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:smn02048]
D SMA_1443 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D SMA_1442 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D SMA_1444 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D SMA_0996 hsdR; Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SMA_1210 hsdR; Type I restriction-modification system, restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SMA_0995 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SMA_0998 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SMA_1209 Type I restriction-modification system, specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SMA_0994 Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SMA_1208 hsdM; Type I restriction-modification system, DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SMA_1173 Hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SMA_0099 ytxK; Adenine-specific methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SMA_1430 Modification methylase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMA_0979 hsdR; Type III restriction-modification system DNA endonuclease res K01156 res; type III restriction enzyme [EC:3.1.21.5]
D SMA_0978 Type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SMA_1003 YoeB toxin protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D SMA_1004 YefM protein (antitoxin to YoeB) K19159 yefM; antitoxin YefM
D SMA_0562 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMA_0890 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMA_0889 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMA_0936 iscS1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMA_1274 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:smn04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:smn01504]
D SMA_0279 vanYB; D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMA_1952 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMA_1951 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMA_1950 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMA_1949 dltD; Poly(glycerophosphate chain) D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D SMA_1778 slyA; Transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:smn03100]
D SMA_tRNA_01 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_50 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_43 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_29 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_19 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_47 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMA_tRNA_09 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_27 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_61 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_64 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_70 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMA_tRNA_44 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMA_tRNA_48 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMA_tRNA_68 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMA_tRNA_03 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMA_tRNA_52 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMA_tRNA_21 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMA_tRNA_67 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SMA_tRNA_40 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMA_tRNA_63 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMA_tRNA_60 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMA_tRNA_33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_62 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_57 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_69 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMA_tRNA_16 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_31 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_07 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_25 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMA_tRNA_39 tRNA-His K14226 tRNA-His; tRNA His
D SMA_tRNA_17 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMA_tRNA_56 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMA_tRNA_32 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMA_tRNA_08 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_41 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_05 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_23 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_54 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_45 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMA_tRNA_04 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_22 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_53 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_42 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMA_tRNA_14 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_12 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_35 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_11 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMA_tRNA_15 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMA_tRNA_36 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMA_tRNA_10 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMA_tRNA_28 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMA_tRNA_49 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_66 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_18 tRNA-Pseudo-GCT K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_13 tRNA-Pseudo-TGA K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_34 tRNA-Pseudo-TGA K14233 tRNA-Ser; tRNA Ser
D SMA_tRNA_06 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_55 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_24 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_46 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_58 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMA_tRNA_38 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SMA_tRNA_37 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMA_tRNA_59 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMA_tRNA_02 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_tRNA_20 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_tRNA_51 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_tRNA_30 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMA_rRNA_01 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_16 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_13 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_04 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_10 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_07 Small Subunit Ribosomal RNA; ssuRNA; SSU ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMA_rRNA_02 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_05 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_17 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_08 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_14 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_11 Large Subunit Ribosomal RNA; lsuRNA; LSU ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMA_rRNA_03 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_09 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_06 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_15 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_12 5S RNA K01985 5SrRNA; 5S ribosomal RNA
D SMA_rRNA_18 5S RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SMA_1204 Oxidoreductase, aldo/keto reductase family K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D SMA_1617 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SMA_1196 Glutathione S-transferase, omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D SMA_0492 tpx; Thiol peroxidase, Tpx-type K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SMA_1097 tpx; Thiol peroxidase, Tpx-type K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SMA_1246 trxB; Thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SMA_2102 nrdG; Ribonucleotide reductase of class III (anaerobic), activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SMA_1688 act; Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SMA_0447 ypsC; Predicted N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SMA_0735 paiA; Acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SMA_1114 maa; Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D SMA_1022 maa; Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D SMA_1549 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SMA_0960 apbE; Hypothetical similar to thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SMA_0332 Dihydroxyacetone kinase family protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SMA_1981 Maturase-related protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D SMA_1289 Maturase-related protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D SMA_1456 ybbP; Hypothetical protein YbbP, contains nucleotide-binding domain of DisA bacterial checkpoint controller K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SMA_1550 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SMA_0856 cpsB; Tyrosine-protein phosphatase CpsB K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SMA_1776 Hydrolase, HAD subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SMA_2155 Phosphoesterase, DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SMA_1931 putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SMA_1930 Ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SMA_0221 dexB; Glucan 1,6-alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D SMA_1529 at1; Autolysin K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SMA_0235 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SMA_1224 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SMA_0658 aldR; Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SMA_1378 mcdM; putative lantibiotic modifying enzyme, similar to ScnM K27862 lanM; class II lanthipeptide synthase [EC:3.13.2.4]
D SMA_1408 Lantibiotic mersacidin modifying enzyme K27862 lanM; class II lanthipeptide synthase [EC:3.13.2.4]
D SMA_0317 67kDa Myosin-crossreactive streptococcal antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D SMA_0582 yjeF; YjeF protein, C-terminal domain K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SMA_0270 copB; Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D SMA_1965 copB; Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D SMA_1250 Probable cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SMA_1510 mgtA; Calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SMA_0305 zosA; Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SMA_0310 cadA; Cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SMA_0481 cadA; Probable cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SMA_0604 cadA; Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D SMA_1662 acuB; Acetoin utilization AcuB protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D SMA_1295 Hypothetical protein K05337 fer; ferredoxin
D SMA_0350 nifU; putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 K04488 iscU; nitrogen fixation protein NifU and related proteins
D SMA_0155 ykgC; putative Dihydrolipoamide dehydrogenase; Mercuric ion reductase; PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D SMA_1237 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D SMA_0594 Hypothetical protein, DegV family K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SMA_0176 nrdI; Ribonucleotide reduction protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D SMA_0489 nrdI; Ribonucleotide reduction protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D SMA_0733 endA; DNA-entry nuclease (Competence-specific nuclease) K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D SMA_1043 Hypothetical protein YaeR with similarity to glyoxylase family K08234 yaeR; glyoxylase I family protein
D SMA_0563 Hypothetical protein YggS K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D SMA_1118 ubiB; Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D SMA_1982 ubiB; Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SMA_0915 cspA; Cold shock protein K03704 cspA; cold shock protein
D SMA_2171 cspA; Cold shock protein CspA K03704 cspA; cold shock protein
D SMA_1085 spxA; Transcriptional regulator SpxA1 K16509 spxA; regulatory protein spx
D SMA_2111 spxA2; Transcriptional regulator SpxA2 K16509 spxA; regulatory protein spx
D SMA_1553 Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
D SMA_0466 yugI; General stress protein 13 K07570 GSP13; general stress protein 13
C 99975 Protein processing
D SMA_0290 tig; Cell division trigger factor K03545 tig; trigger factor
D SMA_1602 smpB; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SMA_0650 nrdH; Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib K06191 nrdH; glutaredoxin-like protein NrdH
D SMA_0345 mecA; Negative regulator of genetic competence MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D SMA_0933 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SMA_1898 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D SMA_1179 Endonuclease III K07457 K07457; endonuclease III related protein
D SMA_0617 yhbQ; COG2827: putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D SMA_1021 smf; Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D SMA_0757 dnaD; Chromosome replication initiation protein DnaD K02086 dnaD; DNA replication protein
D SMA_0166 yrvN; Chromosome segregation helicase K07478 ycaJ; putative ATPase
D SMA_1367 putative transposase K07482 K07482; transposase, IS30 family
D SMA_1521 insI1; Transposase IS1239 K07482 K07482; transposase, IS30 family
D SMA_1723 Transposase K07482 K07482; transposase, IS30 family
D SMA_0518 insI1; ISSth4, transposase, IS30 family, truncated K07482 K07482; transposase, IS30 family
D SMA_0681 Probable transposase for insertion-like sequence element IS1161 K07482 K07482; transposase, IS30 family
D SMA_0923 insI1; Transposase IS1239 K07482 K07482; transposase, IS30 family
D SMA_1365 ISSth1, transposase (orf1), IS3 family K07483 K07483; transposase
D SMA_0265 Hypothetical protein K07483 K07483; transposase
D SMA_0451 Transposase K07483 K07483; transposase
D SMA_0705 Transposase K07483 K07483; transposase
D SMA_1122 Transposase K07483 K07483; transposase
D SMA_1352 Transposase K07483 K07483; transposase
D SMA_1452 Transposase K07483 K07483; transposase
D SMA_1822 Transposase K07483 K07483; transposase
D SMA_1914 Transposase K07483 K07483; transposase
D SMA_1325 Transposase K07483 K07483; transposase
D SMA_1976 Transposase K07483 K07483; transposase
D SMA_1988 Transposase K07483 K07483; transposase
D SMA_1992 Hypothetical protein K07483 K07483; transposase
D SMA_0452 Hypothetical protein K07483 K07483; transposase
D SMA_p0011 Transposase K07483 K07483; transposase
D SMA_1728 Transposase and inactivated derivative K07484 K07484; transposase
D SMA_1730 Degenerate transposase K07484 K07484; transposase
D SMA_1859 tnpA; IS1193, transposase, ISL3 family K07485 K07485; transposase
D SMA_1733 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_1796 tnpA; IS1167, transposase K07485 K07485; transposase
D SMA_1459 IS1167, transposase K07485 K07485; transposase
D SMA_1578 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_1601 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_1784 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_1845 tnpA; IS1167, transposase K07485 K07485; transposase
D SMA_0018 Transposase K07485 K07485; transposase
D SMA_0720 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_0873 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_0136 tnpA; IS1167, transposase K07485 K07485; transposase
D SMA_0294 tnpA; IS1167, transposase K07485 K07485; transposase
D SMA_0908 Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_0916 Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_0954 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_0433 tnpA; IS1167, transposase K07485 K07485; transposase
D SMA_0982 tnpA; Transposase, IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D SMA_1068 tnpA; putative transposase K07485 K07485; transposase
D SMA_1096 tnpA; IS1167, transposase K07485 K07485; transposase
D SMA_0036 Transposase K07486 K07486; transposase
D SMA_2080 Hypothetical protein K07486 K07486; transposase
D SMA_1382 tnp; IS1191, transposase, IS256 family K07493 K07493; putative transposase
D SMA_1919 IS1191, transposase, IS256 family K07493 K07493; putative transposase
D SMA_0321 tra905; IS1191, transposase, IS256 family K07493 K07493; putative transposase
D SMA_0329 tra905; IS1191, transposase, IS256 family K07493 K07493; putative transposase
D SMA_1150 IS1191, transposase, IS256 family K07493 K07493; putative transposase
D SMA_1151 IS1191, transposase, IS256 family K07493 K07493; putative transposase
D SMA_0081 Transposase K07494 K07494; putative transposase
D SMA_1359 Transposase K07497 K07497; putative transposase
D SMA_1364 ISSth1, transposase (orf2), IS3 family K07497 K07497; putative transposase
D SMA_1975 nisX1; Transposase K07497 K07497; putative transposase
D SMA_0706 insK; Transposase K07497 K07497; putative transposase
D SMA_1121 insK; Transposase K07497 K07497; putative transposase
D SMA_1913 nisX1; Transposase K07497 K07497; putative transposase
D SMA_1326 Transposase K07497 K07497; putative transposase
D SMA_1351 Transposase K07497 K07497; putative transposase
D SMA_1453 Transposase K07497 K07497; putative transposase
D SMA_0676 Hypothetical protein K07497 K07497; putative transposase
D SMA_0677 Hypothetical protein K07497 K07497; putative transposase
D SMA_0143 ISSdy1, transposase OrfB K07497 K07497; putative transposase
D SMA_0266 nisX1; Transposase TnpA K07497 K07497; putative transposase
D SMA_0450 insM; Transposase K07497 K07497; putative transposase
D SMA_1050 Transposase K07497 K07497; putative transposase
D SMA_1991 nisX1; Transposase K07497 K07497; putative transposase
D SMA_p0009 Transposase TnpA K07497 K07497; putative transposase
D SMA_1963 Transposase TnpA K07497 K07497; putative transposase
D SMA_0302 Transposase K07498 K07498; putative transposase
D SMA_0311 Transposase K07498 K07498; putative transposase
D SMA_0308 Transposase K07498 K07498; putative transposase
D SMA_0486 Transposase K07498 K07498; putative transposase
D SMA_1825 Transposase K07498 K07498; putative transposase
D SMA_2043 Transposase K07498 K07498; putative transposase
D SMA_p0006 Transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D SMA_1870 Transcriptional regulatory protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SMA_0774 yfnA; Cationic amino acid transporter-APC Superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SMA_0600 dtpT; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SMA_0924 Sodium/glycine symporter GlyP K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SMA_1108 Sodium/glycine symporter GlyP K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SMA_1754 braB; Branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D SMA_0448 Hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D SMA_2034 jag; RNA-binding protein Jag K06346 jag; spoIIIJ-associated protein
D SMA_1372 Site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D SMA_0299 cbbX; AAA+ class-like ATPase K06413 spoVK; stage V sporulation protein K
C 99993 Cell motility
C 99995 Signaling proteins
D SMA_0556 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D SMA_0276 ACT domain containing transcriptional regulators, related to GcvR of E.coli K07166 K07166; ACT domain-containing protein
D SMA_1614 phoH; Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SMA_1528 Lysozyme K07273 acm; lysozyme
C 99994 Others
D SMA_1069 phoU; Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D SMA_1865 phoU; Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D SMA_1654 cutC; Cytoplasmic copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D SMA_1643 Conserved hypothetical protein, possible hemolysis inducing protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SMA_0629 Competence protein CoiA K06198 coiA; competence protein CoiA
D SMA_0116 ytpR; tRNA binding domain protein K06878 K06878; tRNA-binding protein
D SMA_1532 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D SMA_1536 Conserved hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D SMA_1166 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D SMA_0351 sufB; Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SMA_0348 sufD; Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SMA_0714 yfkH; Ribonuclease K07058 K07058; membrane protein
D SMA_0912 Rhodanese domain protein, Firmicutes subgroup K07146 K07146; UPF0176 protein
D SMA_1745 lemA; LemA protein K03744 lemA; LemA protein
D SMA_1552 putative metallopeptidase (Zinc) SprT family K03095 sprL; SprT-like protein
D SMA_2149 Phage infection protein K01421 yhgE; putative membrane protein
D SMA_0843 Membrane protein K08974 K08974; putative membrane protein
D SMA_1556 ABC transporter, substrate-binding protein K08986 ycgQ; putative membrane protein
D SMA_2148 Hypothetical protein K08987 K08987; putative membrane protein
D SMA_0918 phnA; Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D SMA_1513 Deoxyguanosinetriphosphate triphosphohydrolase K06885 K06885; uncharacterized protein
D SMA_0293 yqkD; Hydrolase of the alpha/beta superfamily K06889 K06889; uncharacterized protein
D SMA_1718 ybhL; Membrane protein K06890 K06890; uncharacterized protein
D SMA_2076 Succinyl-CoA synthetase, alpha subunit-related enzyme K06929 K06929; uncharacterized protein
D SMA_0824 Hypothetical protein K06940 K06940; uncharacterized protein
D SMA_0814 HD domain protein K06950 K06950; uncharacterized protein
D SMA_1719 HD family hydrolase K06950 K06950; uncharacterized protein
D SMA_1251 KH domain RNA binding protein YlqC K06960 K06960; uncharacterized protein
D SMA_0252 Hypothetical protein K06962 K06962; uncharacterized protein
D SMA_1555 Possible permease K07089 K07089; uncharacterized protein
D SMA_1712 Phosphoesterase K07095 K07095; uncharacterized protein
D SMA_0607 yrxA; Transcriptional repressor for NAD biosynthesis in gram-positives K07105 K07105; uncharacterized protein
D SMA_0119 yeeE; putative transport system permease protein K07112 K07112; uncharacterized protein
D SMA_1755 Rrf2-linked NADH-flavin reductase K07118 K07118; uncharacterized protein
D SMA_0746 Short chain dehydrogenase K07124 K07124; uncharacterized protein
D SMA_1701 putative short-chain dehydrogenase K07124 K07124; uncharacterized protein
D SMA_1694 COG1242: Predicted Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D SMA_1706 Alpha-hemolysin family protein K08998 K08998; uncharacterized protein
D SMA_1088 Hypothetical protein K09155 K09155; uncharacterized protein
D SMA_0277 Hypothetical protein K09157 K09157; uncharacterized protein
D SMA_0833 Hypothetical protein K09707 K09707; uncharacterized protein
D SMA_1005 Signal recognition particle associated protein K09787 K09787; uncharacterized protein
D SMA_1618 S1 RNA binding domain K00243 K00243; uncharacterized protein
D SMA_1683 yaaA; Hypothetical protein YaaA K09861 K09861; uncharacterized protein
D SMA_0404 Hypothetical protein K09962 K09962; uncharacterized protein
D SMA_1715 Hypothetical protein K09976 K09976; uncharacterized protein
D SMA_1269 Potential ribosomal protein K07584 ysxB; uncharacterized protein
D SMA_0474 Cysteinyl-tRNA synthetase related protein K07586 ygaC; uncharacterized protein
D SMA_0399 ylxR; COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024