+D GENES KO #

  KEGG Orthology (KO) - Staphylococcus nepalensis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:snl00010] D BJD96_06610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D BJD96_10050 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BJD96_02330 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_04175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BJD96_10965 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BJD96_10975 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BJD96_05955 type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D BJD96_10970 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BJD96_02720 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_13135 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_10960 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D BJD96_10955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BJD96_05905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BJD96_09460 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D BJD96_09455 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_08205 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BJD96_05570 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_01670 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_07430 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13280 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_05715 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_03160 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BJD96_09645 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BJD96_05460 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D BJD96_00660 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D BJD96_00805 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D BJD96_00810 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D BJD96_07155 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BJD96_01590 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BJD96_00775 PTS glucose transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:snl00020] D BJD96_05915 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D BJD96_07605 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BJD96_05920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BJD96_07195 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D BJD96_07200 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_08205 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BJD96_08420 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BJD96_08425 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BJD96_09230 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BJD96_09225 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BJD96_09235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BJD96_05255 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D BJD96_11405 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D BJD96_03015 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D BJD96_00905 malate dehydrogenase (acceptor) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D BJD96_09365 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D BJD96_05460 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D BJD96_09460 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D BJD96_09455 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] C 00030 Pentose phosphate pathway [PATH:snl00030] D BJD96_10050 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BJD96_06810 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BJD96_04775 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D BJD96_06795 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BJD96_07940 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BJD96_05495 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BJD96_03170 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BJD96_02950 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D BJD96_12035 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D BJD96_12030 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D BJD96_04110 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D BJD96_04095 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D BJD96_04120 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D BJD96_09645 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BJD96_12615 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BJD96_12200 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D BJD96_02435 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D BJD96_03605 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D BJD96_02390 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12] D BJD96_12195 2-keto-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D BJD96_13590 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_04175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BJD96_02330 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:snl00040] D BJD96_02400 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D BJD96_12175 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D BJD96_02445 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D BJD96_12170 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D BJD96_02450 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D BJD96_02420 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D BJD96_11380 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BJD96_01030 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D BJD96_01035 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D BJD96_03145 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D BJD96_01235 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D BJD96_02205 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D BJD96_01230 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D BJD96_00390 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D BJD96_00400 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D BJD96_00935 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D BJD96_00940 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D BJD96_02210 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] C 00051 Fructose and mannose metabolism [PATH:snl00051] D BJD96_04650 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BJD96_04070 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BJD96_01685 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BJD96_00395 L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D BJD96_00390 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D BJD96_00400 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BJD96_02330 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D BJD96_04000 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D BJD96_11365 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D BJD96_00935 galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D BJD96_00940 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D BJD96_02210 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D BJD96_01230 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_04175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BJD96_10965 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BJD96_02950 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D BJD96_11360 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BJD96_01680 PTS mannose transporter subunit IIABC K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191] D BJD96_04005 PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D BJD96_04015 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] C 00052 Galactose metabolism [PATH:snl00052] D BJD96_03160 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D BJD96_03475 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BJD96_03485 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BJD96_03480 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_12245 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_13875 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_11380 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BJD96_09645 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BJD96_06610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D BJD96_00855 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BJD96_00955 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D BJD96_00950 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D BJD96_00945 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BJD96_04645 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BJD96_06800 glucohydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:snl00053] D BJD96_02420 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D BJD96_01640 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D BJD96_01645 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D BJD96_01650 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D BJD96_01030 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:snl00500] D BJD96_03295 permease K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D BJD96_02900 PTS maltose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D BJD96_04645 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D BJD96_06800 glucohydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D BJD96_11380 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BJD96_00720 PTS mannose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D BJD96_00710 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D BJD96_00715 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D BJD96_00660 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D BJD96_00805 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D BJD96_00810 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D BJD96_07155 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BJD96_01590 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BJD96_03240 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D BJD96_11915 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D BJD96_12765 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D BJD96_09645 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BJD96_06610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D BJD96_10050 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BJD96_04650 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:snl00520] D BJD96_02425 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BJD96_07155 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BJD96_05745 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D BJD96_11355 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D BJD96_12040 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D BJD96_04650 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D BJD96_04020 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BJD96_03995 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D BJD96_12620 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BJD96_03300 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D BJD96_04180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BJD96_04300 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BJD96_11170 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BJD96_02235 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D BJD96_02250 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D BJD96_04245 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D BJD96_07230 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D BJD96_01215 hypothetical protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D BJD96_01590 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BJD96_00775 PTS glucose transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D BJD96_06610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D BJD96_09645 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BJD96_11380 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BJD96_03475 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BJD96_03485 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D BJD96_03480 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_12245 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_13875 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_10050 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BJD96_04070 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BJD96_01685 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] C 00620 Pyruvate metabolism [PATH:snl00620] D BJD96_13280 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_05715 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_08205 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BJD96_09460 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D BJD96_09455 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_07430 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D BJD96_05830 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BJD96_11940 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D BJD96_05905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BJD96_05895 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BJD96_06335 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06710 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06340 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_06715 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_05890 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BJD96_07275 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13690 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D BJD96_02095 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3] D BJD96_05570 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_01670 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_01920 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D BJD96_00415 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D BJD96_02300 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D BJD96_06620 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D BJD96_13380 Zn-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D BJD96_01305 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1] D BJD96_00460 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D BJD96_05885 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D BJD96_09365 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D BJD96_11405 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D BJD96_03015 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D BJD96_00905 malate dehydrogenase (acceptor) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D BJD96_05255 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D BJD96_05460 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_04560 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:snl00630] D BJD96_13280 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_05715 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_11405 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D BJD96_05915 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D BJD96_07605 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_07980 catalase K03781 katE; catalase [EC:1.11.1.6] D BJD96_13090 catalase HPII K03781 katE; catalase [EC:1.11.1.6] D BJD96_10210 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D BJD96_12100 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D BJD96_08090 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BJD96_04235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BJD96_06670 glycine dehydrogenase (aminomethyl-transferring) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D BJD96_06675 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D BJD96_06665 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_01315 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BJD96_11150 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BJD96_00415 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D BJD96_02300 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D BJD96_12200 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D BJD96_02435 bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D BJD96_12995 oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2] D BJD96_03335 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D BJD96_05290 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:snl00640] D BJD96_13280 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_05715 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_13690 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D BJD96_05830 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BJD96_11940 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D BJD96_06765 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D BJD96_06770 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D BJD96_06775 2-oxoglutarate dehydrogenase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_02985 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D BJD96_05895 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BJD96_06335 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06710 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06340 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_06715 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_05890 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BJD96_02170 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D BJD96_01370 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BJD96_08425 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BJD96_08420 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BJD96_05570 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_01670 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:snl00650] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_13675 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D BJD96_06755 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19] D BJD96_09230 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BJD96_09225 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BJD96_09235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BJD96_02170 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D BJD96_01370 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BJD96_01375 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D BJD96_08205 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BJD96_02055 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D BJD96_12270 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D BJD96_12265 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D BJD96_00755 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D BJD96_04575 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BJD96_04570 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BJD96_02355 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D BJD96_14020 butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D BJD96_08660 diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D BJD96_02545 short-chain dehydrogenase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:snl00660] D BJD96_04575 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BJD96_04570 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BJD96_02355 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D BJD96_08425 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BJD96_08420 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BJD96_04550 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BJD96_04545 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BJD96_04555 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:snl00562] D BJD96_09395 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BJD96_03325 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BJD96_01280 NAD(P)-dependent oxidoreductase K22230 iolU; scyllo-inositol 2-dehydrogenase (NADP+) [EC:1.1.1.-] D BJD96_10965 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:snl00190] D BJD96_10155 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D BJD96_10170 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D BJD96_09230 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BJD96_09225 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BJD96_09235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BJD96_09355 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D BJD96_09360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D BJD96_00365 cytochrome aa3 quinol oxidase subunit IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5] D BJD96_09630 cytochrome aa3 quinol oxidase subunit IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5] D BJD96_00360 cytochrome aa3 quinol oxidase subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5] D BJD96_09625 cytochrome aa3 quinol oxidase subunit III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5] D BJD96_00355 cytochrome aa3 quinol oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5] D BJD96_09620 cytochrome aa3 quinol oxidase subunit I K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5] D BJD96_00350 cytochrome aa3 quinol oxidase subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5] D BJD96_09615 cytochrome aa3 quinol oxidase subunit II K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5] D BJD96_09500 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D BJD96_09495 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D BJD96_04275 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BJD96_04285 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BJD96_04280 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BJD96_04270 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BJD96_04290 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BJD96_04255 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BJD96_04265 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BJD96_04260 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BJD96_04785 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D BJD96_02535 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:snl00710] D BJD96_10970 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BJD96_10975 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BJD96_05955 type I glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_04175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BJD96_02330 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D BJD96_07940 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D BJD96_03170 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D BJD96_02950 ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D BJD96_10965 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BJD96_05495 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D BJD96_05460 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D BJD96_11405 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:snl00720] D BJD96_09365 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D BJD96_11405 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D BJD96_05255 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D BJD96_09230 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D BJD96_09225 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D BJD96_09235 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D BJD96_08420 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D BJD96_08425 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_08205 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D BJD96_05920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BJD96_07605 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D BJD96_05895 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BJD96_06335 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06710 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06340 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_06715 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_05890 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BJD96_05720 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BJD96_09605 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BJD96_11940 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D BJD96_05830 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BJD96_13280 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_05715 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:snl00680] D BJD96_07430 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D BJD96_03335 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D BJD96_04235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BJD96_10955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BJD96_11405 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_04175 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D BJD96_02330 fructose 1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11] D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BJD96_12030 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D BJD96_12035 3-hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D BJD96_05830 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D BJD96_11940 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D BJD96_13280 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_05715 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_02720 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_13135 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_10960 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D BJD96_05755 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00910 Nitrogen metabolism [PATH:snl00910] D BJD96_02810 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02815 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02825 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02795 nitrite reductase large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D BJD96_02800 nitrite reductase K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D BJD96_10255 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D BJD96_12140 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_10070 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_08090 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BJD96_12780 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BJD96_12775 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BJD96_12895 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:snl00920] D BJD96_01100 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D BJD96_01550 FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38] D BJD96_13495 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D BJD96_13490 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D BJD96_05875 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D BJD96_13530 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D BJD96_13525 sulfite reductase [NADPH] flavoprotein, alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D BJD96_13650 sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D BJD96_13520 sulfite reductase subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D BJD96_13375 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D BJD96_12390 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BJD96_12550 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D BJD96_00060 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D BJD96_13625 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:snl00061] D BJD96_05895 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D BJD96_06335 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06710 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D BJD96_06340 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_06715 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D BJD96_05890 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D BJD96_08525 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D BJD96_09945 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D BJD96_09940 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D BJD96_08250 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08470 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08520 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_04305 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D BJD96_09830 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D BJD96_13685 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_12025 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:snl00071] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_13670 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D BJD96_13675 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D BJD96_13680 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D BJD96_13685 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_12025 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_07430 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:snl00100] D BJD96_06085 phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:snl00561] D BJD96_01315 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BJD96_11150 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_11625 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D BJD96_02940 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D BJD96_11620 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D BJD96_02945 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D BJD96_11615 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D BJD96_10760 D-threitol dehydrogenase K22251 golD; glycerol dehydrogenase [EC:1.1.1.6] D BJD96_08135 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D BJD96_08530 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D BJD96_07590 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BJD96_05740 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BJD96_04885 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D BJD96_12860 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D BJD96_09800 diglucosyl diacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D BJD96_11280 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] C 00564 Glycerophospholipid metabolism [PATH:snl00564] D BJD96_06930 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D BJD96_08130 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D BJD96_07590 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BJD96_05740 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D BJD96_11665 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] D BJD96_04885 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D BJD96_05565 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D BJD96_09335 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D BJD96_01190 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D BJD96_05770 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D BJD96_10065 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D BJD96_10775 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D BJD96_08355 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D BJD96_08235 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D BJD96_04355 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D BJD96_01360 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D BJD96_04845 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-] D BJD96_11050 acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D BJD96_00855 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:snl00592] D BJD96_13670 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:snl00230] D BJD96_06835 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D BJD96_04120 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D BJD96_09645 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BJD96_12615 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D BJD96_09570 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BJD96_09550 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D BJD96_09560 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D BJD96_09575 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D BJD96_09585 phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D BJD96_09580 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D BJD96_09565 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D BJD96_09595 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D BJD96_09600 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D BJD96_09590 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D BJD96_04835 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BJD96_09555 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BJD96_06195 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BJD96_04105 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D BJD96_09105 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BJD96_12565 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D BJD96_13045 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BJD96_06955 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BJD96_09215 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D BJD96_13055 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D BJD96_13040 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BJD96_07960 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D BJD96_08995 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D BJD96_11210 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D BJD96_11205 class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D BJD96_01080 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BJD96_12085 deoxyguanosine kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113] D BJD96_06200 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BJD96_02540 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D BJD96_09855 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D BJD96_02380 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D BJD96_00085 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BJD96_12090 deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D BJD96_13480 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D BJD96_09765 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D BJD96_08210 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D BJD96_03745 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BJD96_13490 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D BJD96_13495 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D BJD96_12955 allantoinase K01466 allB; allantoinase [EC:3.5.2.5] D BJD96_12930 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D BJD96_12885 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] D BJD96_12925 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D BJD96_01770 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D BJD96_01775 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D BJD96_01780 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D BJD96_12915 ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350] D BJD96_12920 ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350] D BJD96_13000 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D BJD96_12895 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:snl00240] D BJD96_09030 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BJD96_09035 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BJD96_09045 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BJD96_09040 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D BJD96_01840 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D BJD96_09020 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D BJD96_09025 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D BJD96_08370 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D BJD96_06955 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BJD96_04165 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D BJD96_06915 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D BJD96_06315 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D BJD96_04240 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D BJD96_09055 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D BJD96_09765 bifunctional metallophosphatase/5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D BJD96_08210 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D BJD96_01605 pseudouridine-5-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D BJD96_04115 deoA; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] D BJD96_06505 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D BJD96_00800 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D BJD96_01080 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D BJD96_11210 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D BJD96_11205 class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D BJD96_12090 deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74] D BJD96_06405 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12] D BJD96_12705 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D BJD96_08830 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BJD96_14265 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BJD96_10435 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BJD96_04205 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D BJD96_07130 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D BJD96_12940 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:snl00250] D BJD96_06910 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BJD96_04675 hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D BJD96_05845 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D BJD96_10055 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BJD96_10060 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BJD96_00085 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D BJD96_04835 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D BJD96_09045 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D BJD96_02170 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D BJD96_01370 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BJD96_01375 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D BJD96_12780 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BJD96_12775 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D BJD96_12140 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_10070 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_02000 L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D BJD96_08090 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BJD96_09030 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BJD96_09035 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BJD96_09580 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D BJD96_04020 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BJD96_09570 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:snl00260] D BJD96_07325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_08035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_07320 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BJD96_08030 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BJD96_08020 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D BJD96_08025 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BJD96_04235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BJD96_01315 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BJD96_11150 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D BJD96_02720 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_13135 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_10960 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D BJD96_05755 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BJD96_12285 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D BJD96_06670 glycine dehydrogenase (aminomethyl-transferring) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D BJD96_06675 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D BJD96_06665 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_01420 choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D BJD96_01415 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D BJD96_13465 N-methyltryptophan oxidase K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D BJD96_08550 L-serine dehydratase, iron-sulfur-dependent subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BJD96_08555 L-serine dehydratase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BJD96_04540 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BJD96_02530 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D BJD96_07465 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BJD96_07470 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:snl00270] D BJD96_12390 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D BJD96_12550 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D BJD96_13630 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BJD96_01210 Fis family transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BJD96_13635 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D BJD96_13640 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BJD96_05465 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BJD96_06355 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D BJD96_09105 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D BJD96_01915 N-succinyldiaminopimelate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D BJD96_05785 Free methionine-(R)-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D BJD96_04130 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BJD96_07325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_08035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_07320 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BJD96_08030 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BJD96_00060 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D BJD96_13625 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BJD96_01705 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D BJD96_12110 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BJD96_05570 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_01670 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_02115 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D BJD96_11405 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D BJD96_08550 L-serine dehydratase, iron-sulfur-dependent subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BJD96_08555 L-serine dehydratase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D BJD96_05755 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:snl00280] D BJD96_12110 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BJD96_06765 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D BJD96_06770 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D BJD96_06775 2-oxoglutarate dehydrogenase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_13670 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_01370 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BJD96_12270 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D BJD96_12265 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02055 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:snl00290] D BJD96_04540 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D BJD96_04550 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D BJD96_04545 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D BJD96_04555 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D BJD96_04575 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BJD96_04570 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BJD96_04565 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BJD96_12850 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BJD96_12110 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BJD96_04560 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:snl00300] D BJD96_08030 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D BJD96_07325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_08035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_07320 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BJD96_07315 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BJD96_07310 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D BJD96_13470 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_05625 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_01545 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_02135 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_02225 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_07290 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D BJD96_07305 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] D BJD96_09680 N-acetyl-L,L-diaminopimelate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D BJD96_00695 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BJD96_04385 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:snl00310] D BJD96_07200 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_13680 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_01370 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BJD96_01375 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D BJD96_05630 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:snl00220] D BJD96_01585 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D BJD96_10055 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BJD96_10060 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BJD96_03980 arginase K01476 rocF; arginase [EC:3.5.3.1] D BJD96_00500 arginase K01476 rocF; arginase [EC:3.5.3.1] D BJD96_01770 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D BJD96_01775 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D BJD96_01780 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D BJD96_04810 nitric oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47] D BJD96_09580 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D BJD96_08090 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BJD96_09030 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D BJD96_09035 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D BJD96_12895 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D BJD96_12140 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_10070 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_01535 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D BJD96_01540 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D BJD96_01530 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] C 00330 Arginine and proline metabolism [PATH:snl00330] D BJD96_00800 cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D BJD96_13715 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D BJD96_00895 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D BJD96_12145 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13545 diamine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D BJD96_04810 nitric oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47] D BJD96_03980 arginase K01476 rocF; arginase [EC:3.5.3.1] D BJD96_00500 arginase K01476 rocF; arginase [EC:3.5.3.1] D BJD96_10075 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D BJD96_01525 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D BJD96_06820 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D BJD96_05560 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D BJD96_02000 L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D BJD96_05630 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:snl00340] D BJD96_02520 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D BJD96_02485 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D BJD96_02495 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D BJD96_02500 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D BJD96_02490 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D BJD96_02505 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D BJD96_11250 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_02510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_02515 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D BJD96_00040 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D BJD96_03195 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D BJD96_03200 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D BJD96_03180 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:snl00350] D BJD96_11250 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_02510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_07430 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D BJD96_01375 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:snl00360] D BJD96_11250 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_02510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_05630 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00380 Tryptophan metabolism [PATH:snl00380] D BJD96_07200 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_13680 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_07980 catalase K03781 katE; catalase [EC:1.11.1.6] D BJD96_13090 catalase HPII K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:snl00400] D BJD96_05695 chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5] D BJD96_06965 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D BJD96_10650 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D BJD96_06370 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D BJD96_06660 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D BJD96_06970 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D BJD96_06960 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D BJD96_07495 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BJD96_07490 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D BJD96_07485 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D BJD96_07475 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D BJD96_07480 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D BJD96_07465 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D BJD96_07470 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D BJD96_06155 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5] D BJD96_07510 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BJD96_04805 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D BJD96_11250 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_02510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:snl00410] D BJD96_02170 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D BJD96_01370 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_12940 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] C 00430 Taurine and hypotaurine metabolism [PATH:snl00430] D BJD96_02160 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D BJD96_05845 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D BJD96_12140 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_10070 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2] D BJD96_11940 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D BJD96_05830 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:snl00440] D BJD96_01520 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1] D BJD96_01515 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D BJD96_03505 metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:snl00450] D BJD96_13625 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D BJD96_13630 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BJD96_01210 Fis family transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BJD96_13635 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D BJD96_13640 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D BJD96_10580 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D BJD96_11040 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D BJD96_13495 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D BJD96_13600 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D BJD96_12665 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:snl00460] D BJD96_02160 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D BJD96_06910 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D BJD96_04235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:snl00470] D BJD96_07295 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BJD96_04415 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BJD96_05630 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D BJD96_04380 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BJD96_10200 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D BJD96_10190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D BJD96_09580 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D BJD96_09220 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BJD96_09125 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BJD96_02530 D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D BJD96_02115 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D BJD96_07290 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D BJD96_03865 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12] C 00480 Glutathione metabolism [PATH:snl00480] D BJD96_02160 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D BJD96_06345 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D BJD96_10150 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D BJD96_05920 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D BJD96_06795 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D BJD96_06810 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BJD96_08110 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:snl00511] D BJD96_00855 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D BJD96_09665 autolysin K13714 atl; bifunctional autolysin [EC:3.5.1.28 3.2.1.96] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:snl00542] D BJD96_11125 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:snl00541] D BJD96_11380 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D BJD96_03480 UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_12245 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_13875 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D BJD96_04070 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BJD96_01685 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D BJD96_12620 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D BJD96_04245 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D BJD96_07230 lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] C 00550 Peptidoglycan biosynthesis [PATH:snl00550] D BJD96_04180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BJD96_04300 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BJD96_11170 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BJD96_05680 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BJD96_09125 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BJD96_00695 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BJD96_04380 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BJD96_04385 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BJD96_06500 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66] D BJD96_08360 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BJD96_11445 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_07180 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_13755 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_09130 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BJD96_07175 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BJD96_07040 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D BJD96_11660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_12250 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_00795 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_00790 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BJD96_09795 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7] D BJD96_04915 UDP-N-acetylmuramate--alanine ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D BJD96_04920 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D BJD96_03580 aminoacyltransferase K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16] D BJD96_07455 aminoacyltransferase K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17] D BJD96_07450 aminoacyltransferase K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18] D BJD96_05725 transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28] D BJD96_04995 glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28] D BJD96_09135 penicillin-binding protein K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-] D BJD96_06585 penicillin-binding protein K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-] C 00552 Teichoic acid biosynthesis [PATH:snl00552] D BJD96_11445 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_07180 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_13755 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_11125 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BJD96_11690 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D BJD96_11675 teichoic acid biosynthesis protein B K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44] D BJD96_12240 teichoic acid biosynthesis protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D BJD96_13880 hypothetical protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D BJD96_13885 teichoic acid biosynthesis protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12] D BJD96_00780 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D BJD96_00785 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D BJD96_10200 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D BJD96_10190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D BJD96_10195 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D BJD96_10185 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D BJD96_12815 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D BJD96_07525 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D BJD96_09650 hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D BJD96_03330 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D BJD96_09800 diglucosyl diacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D BJD96_11280 glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20] D BJD96_11340 glycosyltransferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-] D BJD96_08440 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein D BJD96_08445 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:snl00543] D BJD96_11125 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BJD96_12390 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:snl00730] D BJD96_04330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D BJD96_05795 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_06260 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_05800 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D BJD96_04335 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BJD96_04340 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D BJD96_08585 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D BJD96_03285 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BJD96_08575 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D BJD96_03745 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:snl00740] D BJD96_05550 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D BJD96_05540 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BJD96_09990 phosphatase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104] D BJD96_05555 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D BJD96_05545 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D BJD96_08290 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D BJD96_01100 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D BJD96_01550 FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38] D BJD96_13085 NADPH-dependent oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38] D BJD96_04335 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D BJD96_06835 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:snl00750] D BJD96_11995 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D BJD96_08025 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D BJD96_12440 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D BJD96_12435 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:snl00760] D BJD96_04815 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D BJD96_04105 purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D BJD96_06380 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D BJD96_04820 NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D BJD96_00670 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D BJD96_09850 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D BJD96_01375 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:snl00770] D BJD96_04575 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D BJD96_04570 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D BJD96_04565 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D BJD96_12850 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D BJD96_01660 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D BJD96_04150 type II pantothenate kinase K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33] D BJD96_08985 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D BJD96_09315 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D BJD96_05950 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D BJD96_04410 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D BJD96_12110 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BJD96_12940 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:snl00780] D BJD96_09940 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D BJD96_08250 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08470 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08520 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_04305 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D BJD96_09830 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D BJD96_07010 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:snl00785] D BJD96_06685 octanoyltransferase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181] D BJD96_10235 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D BJD96_11935 lipoate--protein ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D BJD96_09750 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D BJD96_01270 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_09460 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D BJD96_09455 2-oxoisovalerate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D BJD96_07195 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D BJD96_07200 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D BJD96_06765 2-oxoisovalerate dehydrogenase K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D BJD96_06770 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D BJD96_06775 2-oxoglutarate dehydrogenase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D BJD96_06670 glycine dehydrogenase (aminomethyl-transferring) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D BJD96_06675 glycine dehydrogenase (aminomethyl-transferring) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D BJD96_06665 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] C 00790 Folate biosynthesis [PATH:snl00790] D BJD96_12055 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D BJD96_03285 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BJD96_12540 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D BJD96_12535 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D BJD96_12545 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D BJD96_07135 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BJD96_06070 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D BJD96_05550 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D BJD96_11310 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D BJD96_11305 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D BJD96_11300 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D BJD96_11320 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D BJD96_01900 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D BJD96_11325 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D BJD96_11315 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D BJD96_11225 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D BJD96_03550 cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D BJD96_03520 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D BJD96_03535 molybdopterin synthase subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D BJD96_03515 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D BJD96_03525 molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D BJD96_03545 molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:snl00670] D BJD96_07135 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D BJD96_05720 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D BJD96_09605 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D BJD96_04235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D BJD96_09560 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D BJD96_09555 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BJD96_08610 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BJD96_06665 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D BJD96_13635 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54] D BJD96_07130 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D BJD96_05290 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D BJD96_06595 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:snl00860] D BJD96_06025 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D BJD96_05045 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D BJD96_06050 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D BJD96_06045 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D BJD96_06035 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D BJD96_06040 uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D BJD96_05360 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D BJD96_05370 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D BJD96_05365 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D BJD96_11945 heme-dependent peroxidase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D BJD96_02805 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D BJD96_13515 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D BJD96_02790 preprotein translocase subunit TatB K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D BJD96_13505 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D BJD96_13510 sirohydrochlorin ferrochelatase K03794 sirB; sirohydrochlorin ferrochelatase [EC:4.99.1.4] D BJD96_09355 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D BJD96_09360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D BJD96_03890 heme-degrading monooxygenase IsdG K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48] D BJD96_02420 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:snl00130] D BJD96_06945 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D BJD96_09700 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D BJD96_09695 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D BJD96_09690 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D BJD96_05435 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D BJD96_05430 o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D BJD96_09685 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D BJD96_10140 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D BJD96_09705 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:snl00900] D BJD96_12640 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02055 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D BJD96_02065 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D BJD96_11930 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D BJD96_11920 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2] D BJD96_11925 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D BJD96_03105 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D BJD96_06740 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BJD96_06940 heptaprenyl pyrophosphate synthase subunit A K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30] D BJD96_06950 heptaprenyl diphosphate synthase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D BJD96_08360 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:snl00909] D BJD96_06085 phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:snl00906] D BJD96_00595 squalene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96] D BJD96_00600 dehydrosqualene desaturase K10209 crtN; 4,4'-diapophytoene desaturase [EC:1.3.8.2] D BJD96_00585 diapolycopene oxygenase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44] D BJD96_04780 aldehyde dehydrogenase K25072 crtNc; 4,4'-diapolycopenoate synthase [EC:1.2.99.10] D BJD96_00590 glycosyl transferase family 2 K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-] D BJD96_00580 glycosyl-4,4'-diaponeurosporenoate acyltransferase K10212 K10212; glycosyl-4,4'-diaponeurosporenoate acyltransferase [EC:2.3.1.-] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:snl00907] D BJD96_13670 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D BJD96_07940 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D BJD96_09700 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D BJD96_01090 choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:snl00261] D BJD96_13495 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D BJD96_07325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_08035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D BJD96_07320 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D BJD96_07315 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D BJD96_07310 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:snl00521] D BJD96_06610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D BJD96_09645 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D BJD96_09395 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D BJD96_03325 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D BJD96_06610 glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:snl00401] D BJD96_07510 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D BJD96_11250 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_02510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D BJD96_07495 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BJD96_07490 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D BJD96_08525 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D BJD96_08250 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08470 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08520 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_09830 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:snl00999] D BJD96_05465 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D BJD96_06370 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites [PATH:snl00997] D BJD96_03865 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12] D BJD96_03850 sialic acid synthase K23446 sfnaD; D-ornithine---citrate ligase [EC:6.3.2.58] D BJD96_03860 siderophore synthetase K23447 sfnaB; staphyloferrin A synthase [EC:6.3.2.57] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:snl00362] D BJD96_13670 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D BJD96_09070 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_02275 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_07520 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D BJD96_00765 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D BJD96_13675 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D BJD96_13680 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D BJD96_07275 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:snl00625] D BJD96_07430 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D BJD96_07405 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_04190 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_00475 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_13970 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D BJD96_02220 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:snl00361] D BJD96_09070 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_02275 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_02220 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation [PATH:snl00622] D BJD96_09070 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_02275 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_07520 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D BJD96_13670 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:snl00643] D BJD96_09070 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_02275 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D BJD96_13690 acyl CoA:acetate/3-ketoacid CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation D BJD96_01770 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D BJD96_01775 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D BJD96_01780 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D BJD96_07520 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:snl00626] D BJD96_07430 glutathione-dependent formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:snl03020] D BJD96_12325 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BJD96_12320 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BJD96_03770 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BJD96_08990 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BJD96_04160 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:snl03010] D BJD96_06920 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BJD96_08380 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BJD96_05780 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BJD96_03725 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BJD96_13225 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BJD96_12305 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BJD96_03710 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BJD96_03805 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BJD96_03635 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BJD96_03765 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BJD96_12310 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BJD96_03760 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BJD96_07965 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BJD96_03705 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BJD96_08285 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BJD96_08465 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BJD96_03685 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BJD96_13215 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BJD96_03660 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BJD96_06420 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BJD96_06470 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D BJD96_12345 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BJD96_03655 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BJD96_03640 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BJD96_03645 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BJD96_03700 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BJD96_03715 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BJD96_12335 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BJD96_00075 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BJD96_12340 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BJD96_03800 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BJD96_03690 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BJD96_03735 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BJD96_03675 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BJD96_03775 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BJD96_03720 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BJD96_08450 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BJD96_05995 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BJD96_06135 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BJD96_03665 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BJD96_03650 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BJD96_03695 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BJD96_12610 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D BJD96_06145 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BJD96_08570 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BJD96_03680 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BJD96_03730 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BJD96_04200 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BJD96_09295 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BJD96_07970 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BJD96_06590 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BJD96_13850 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BJD96_05990 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BJD96_03755 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BJD96_12315 ribosomal protein L7Ae K07590 RP-L7A; large subunit ribosomal protein L7A D BJD96_03935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_04525 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_05065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12480 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12465 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12475 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_03940 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_04530 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_05080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12470 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_03945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12525 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_04535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_05085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:snl00970] D BJD96_12485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BJD96_05130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BJD96_05075 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BJD96_11010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_12495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_05120 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_09205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_05405 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BJD96_09735 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BJD96_03950 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BJD96_05385 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BJD96_00100 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BJD96_05160 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BJD96_05195 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BJD96_03970 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BJD96_05190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BJD96_05410 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BJD96_00095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BJD96_03955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BJD96_05110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_12505 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_04520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05185 tRNA-His K14226 tRNA-His; tRNA His D BJD96_05395 tRNA-His K14226 tRNA-His; tRNA His D BJD96_12460 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BJD96_05070 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BJD96_05210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_12500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_04515 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_05115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_05105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_05100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BJD96_12510 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BJD96_03975 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BJD96_05380 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05135 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05140 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05155 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05390 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BJD96_05165 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BJD96_12490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BJD96_05125 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BJD96_05150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_09730 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_05415 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_12770 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_05145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_05170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BJD96_05095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BJD96_12515 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BJD96_05180 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BJD96_05175 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BJD96_03965 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BJD96_12520 tRNA-Val K14237 tRNA-Val; tRNA Val D BJD96_05090 tRNA-Val K14237 tRNA-Val; tRNA Val D BJD96_03960 tRNA-Val K14237 tRNA-Val; tRNA Val D BJD96_12395 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D BJD96_04875 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BJD96_04880 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BJD96_04870 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BJD96_06280 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BJD96_06220 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BJD96_07020 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BJD96_06520 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BJD96_05975 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BJD96_00045 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BJD96_13600 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D BJD96_12385 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BJD96_12665 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BJD96_08610 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D BJD96_06065 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BJD96_09075 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BJD96_12530 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BJD96_11835 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BJD96_08345 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BJD96_06215 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BJD96_09280 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BJD96_09275 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BJD96_05730 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BJD96_09900 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:snl03060] D BJD96_03740 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BJD96_12360 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BJD96_10945 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BJD96_06185 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D BJD96_06180 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BJD96_04345 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BJD96_11095 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BJD96_08490 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BJD96_12750 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA D BJD96_08500 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BJD96_10035 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BJD96_10040 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BJD96_09065 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:snl04122] D BJD96_05795 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_06260 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_06265 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BJD96_03535 molybdopterin synthase subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D BJD96_03550 cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D BJD96_03540 molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D BJD96_03510 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D BJD96_04470 hypothetical protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D BJD96_03520 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D BJD96_03515 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D BJD96_05800 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:snl03018] D BJD96_10955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BJD96_08280 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BJD96_10935 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D BJD96_04390 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D BJD96_11265 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BJD96_06895 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BJD96_04195 transcription termination factor Rho K03628 rho; transcription termination factor Rho D BJD96_08220 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D BJD96_08275 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D BJD96_09485 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BJD96_06445 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BJD96_04700 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BJD96_08115 RNA chaperone Hfq K03666 hfq; host factor-I protein D BJD96_02535 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:snl03030] D BJD96_04905 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BJD96_05880 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BJD96_08340 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D BJD96_12740 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BJD96_12695 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BJD96_06415 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BJD96_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BJD96_00080 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BJD96_06535 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BJD96_07835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_04315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_13220 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_10510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_07095 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BJD96_08430 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BJD96_09270 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D BJD96_05940 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BJD96_04855 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:snl03410] D BJD96_07030 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BJD96_11990 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BJD96_05025 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BJD96_03135 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D BJD96_05945 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D BJD96_01890 DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D BJD96_06060 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D BJD96_06560 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D BJD96_05940 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BJD96_06190 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BJD96_04855 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:snl03420] D BJD96_12600 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BJD96_11065 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BJD96_11070 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BJD96_09240 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BJD96_04850 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BJD96_05940 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BJD96_04855 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:snl03430] D BJD96_08160 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D BJD96_09250 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D BJD96_08155 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D BJD96_04850 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BJD96_06730 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BJD96_06735 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BJD96_06190 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BJD96_07835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_04315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_13220 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_10510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_05880 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BJD96_08340 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D BJD96_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BJD96_12740 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BJD96_06415 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BJD96_12695 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BJD96_04905 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BJD96_04855 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:snl03440] D BJD96_06190 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BJD96_07835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_04315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_13220 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_10510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_00020 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D BJD96_12730 recombination protein RecR K06187 recR; recombination protein RecR D BJD96_08225 recombinase RecA K03553 recA; recombination protein RecA D BJD96_05940 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BJD96_06165 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BJD96_08545 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BJD96_06275 RecD/TraA family helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D BJD96_05880 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BJD96_08340 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D BJD96_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BJD96_12740 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BJD96_06415 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BJD96_12695 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BJD96_04905 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BJD96_08980 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:snl02010] D BJD96_03490 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D BJD96_03495 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D BJD96_03500 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D BJD96_01510 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D BJD96_01505 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D BJD96_01500 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D BJD96_09430 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D BJD96_13700 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D BJD96_13705 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D BJD96_11255 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D BJD96_02630 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D BJD96_02635 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D BJD96_02625 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D BJD96_02620 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D BJD96_07535 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D BJD96_07540 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D BJD96_07545 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D BJD96_07550 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D BJD96_00305 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D BJD96_00310 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D BJD96_00315 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D BJD96_00320 sugar ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D BJD96_07345 thioredoxine reductase K02040 pstS; phosphate transport system substrate-binding protein D BJD96_07350 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D BJD96_07355 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D BJD96_07360 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BJD96_03435 amino acid ABC transporter substrate-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein D BJD96_03430 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein D BJD96_03425 ABC transporter permease K16959 tcyM; L-cystine transport system permease protein D BJD96_03440 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D BJD96_05220 glutamate ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D BJD96_01665 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D BJD96_10605 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D BJD96_10610 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D BJD96_10615 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D BJD96_09905 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D BJD96_09925 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BJD96_09920 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BJD96_09915 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D BJD96_09910 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BJD96_03870 iron citrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein D BJD96_13305 iron citrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein D BJD96_03880 fecD; iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein D BJD96_03875 iron-siderophore ABC transporter permease K23183 fecC; ferric citrate transport system permease protein D BJD96_11715 manganese ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein D BJD96_01425 zinc ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein D BJD96_11710 manganese ABC transporter permease K19976 mntB; manganese transport system permease protein D BJD96_01430 manganese ABC transporter permease K19976 mntB; manganese transport system permease protein D BJD96_01435 manganese ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D BJD96_11705 phosphonate ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D BJD96_02295 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D BJD96_06570 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D BJD96_06565 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D BJD96_03455 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D BJD96_03790 transporter K16785 ecfT; energy-coupling factor transport system permease protein D BJD96_09545 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D BJD96_02180 ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein D BJD96_03780 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BJD96_03785 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BJD96_11680 teichoic acid ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D BJD96_05015 sugar ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D BJD96_11685 teichoic acid export protein ATP-binding subunit K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D BJD96_05010 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D BJD96_03030 heme ABC transporter permease K09813 hrtB; hemin transport system permease protein D BJD96_03035 hemin ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D BJD96_01945 bacitracin ABC transporter permease K11632 bceB; bacitracin transport system permease protein D BJD96_01940 bacitracin ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D BJD96_02280 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BJD96_02285 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BJD96_11655 antibiotic ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D BJD96_11435 thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D BJD96_11440 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D BJD96_01820 macrolide efflux ABC transporter Msr(A) K18231 msr; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:snl02060] D BJD96_09510 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BJD96_09515 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BJD96_00775 PTS glucose transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D BJD96_07155 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BJD96_05745 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D BJD96_01590 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BJD96_03295 permease K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D BJD96_02900 PTS maltose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D BJD96_00815 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D BJD96_00655 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D BJD96_03240 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D BJD96_11915 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D BJD96_12765 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D BJD96_01680 PTS mannose transporter subunit IIABC K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191] D BJD96_04005 PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D BJD96_04015 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D BJD96_00720 PTS mannose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D BJD96_00710 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D BJD96_00715 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D BJD96_00955 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D BJD96_00950 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D BJD96_00945 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D BJD96_01640 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D BJD96_01645 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D BJD96_01650 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D BJD96_11360 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BJD96_11365 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:snl03070] D BJD96_06185 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D BJD96_12360 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BJD96_10945 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BJD96_03740 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BJD96_06180 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BJD96_04345 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BJD96_11095 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BJD96_08500 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BJD96_08490 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:snl02020] D BJD96_05930 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D BJD96_05925 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D BJD96_03285 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BJD96_07345 thioredoxine reductase K02040 pstS; phosphate transport system substrate-binding protein D BJD96_05735 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D BJD96_13795 transporter K07793 tctA; putative tricarboxylic transport membrane protein D BJD96_13800 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D BJD96_06875 two-component sensor histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D BJD96_06870 DNA-binding response regulator K07775 resD; two-component system, OmpR family, response regulator ResD D BJD96_09360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D BJD96_00120 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D BJD96_00115 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D BJD96_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D BJD96_01940 bacitracin ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D BJD96_01945 bacitracin ABC transporter permease K11632 bceB; bacitracin transport system permease protein D BJD96_11560 histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3] D BJD96_11565 DNA-binding response regulator K19078 graR; two-component system, OmpR family, response regulator protein GraR D BJD96_10200 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D BJD96_10195 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D BJD96_10190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D BJD96_10185 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D BJD96_07565 phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D BJD96_00790 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BJD96_07190 two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D BJD96_07185 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D BJD96_10095 kinase K06347 kapB; kinase-associated protein B D BJD96_00450 two-component system response regulator DcuR K11615 malR; two-component system, CitB family, response regulator MalR D BJD96_00460 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D BJD96_05885 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D BJD96_00455 malate permease K11616 maeN; malate:Na+ symporter D BJD96_04670 accessory regulator AgrB K07813 agrB; accessory gene regulator B D BJD96_04665 accessory regulator AgrD K07800 agrD; AgrD protein D BJD96_04660 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D BJD96_04655 DNA-binding response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D BJD96_02810 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02815 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02825 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02820 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D BJD96_04945 two-component sensor histidine kinase K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3] D BJD96_04950 DNA-binding response regulator K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR D BJD96_02835 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D BJD96_02840 DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D BJD96_02830 hypothetical protein K10851 nreA; nitrogen regulatory protein A D BJD96_02845 nitrate transporter NarT K10850 narT; MFS transporter, NNP family, putative nitrate transporter D BJD96_08090 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_09500 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D BJD96_09495 cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D BJD96_04965 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D BJD96_04245 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D BJD96_03980 arginase K01476 rocF; arginase [EC:3.5.3.1] D BJD96_00500 arginase K01476 rocF; arginase [EC:3.5.3.1] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:snl02024] D BJD96_04130 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D BJD96_08115 RNA chaperone Hfq K03666 hfq; host factor-I protein D BJD96_07495 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D BJD96_07490 glutamine amidotransferase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D BJD96_01135 hypothetical protein K20276 bapA; large repetitive protein D BJD96_13685 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_12025 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_05540 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D BJD96_11780 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BJD96_04665 accessory regulator AgrD K07800 agrD; AgrD protein D BJD96_04670 accessory regulator AgrB K07813 agrB; accessory gene regulator B D BJD96_04660 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D BJD96_04655 DNA-binding response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA D BJD96_09170 phenol soluble modulin K20337 psmB; phenol-soluble modulin beta D BJD96_09175 hemolytic protein K20337 psmB; phenol-soluble modulin beta D BJD96_09180 phenol soluble modulin K20337 psmB; phenol-soluble modulin beta D BJD96_09185 hemolytic protein K20337 psmB; phenol-soluble modulin beta D BJD96_09190 phenol soluble modulin K20337 psmB; phenol-soluble modulin beta D BJD96_13460 hemolysin activation protein K20337 psmB; phenol-soluble modulin beta D BJD96_01595 hemolysin activation protein K20337 psmB; phenol-soluble modulin beta D BJD96_05575 repressor K20338 rot; MarR family transcriptional regulator, global regulator for virulence D BJD96_09905 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D BJD96_09925 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BJD96_09920 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BJD96_09915 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D BJD96_09910 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BJD96_01790 nickel ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BJD96_01795 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D BJD96_01800 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BJD96_01805 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D BJD96_01810 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D BJD96_04345 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D BJD96_01860 peptidase K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D BJD96_09740 competence protein ComK K02250 comK; competence protein ComK D BJD96_06185 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D BJD96_12360 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BJD96_10945 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BJD96_03740 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BJD96_06180 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BJD96_11095 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BJD96_08500 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BJD96_08490 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D BJD96_07535 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly D BJD96_06540 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D BJD96_10955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:snl01501] D BJD96_02425 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D BJD96_09905 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D BJD96_09925 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BJD96_09920 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BJD96_09915 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D BJD96_09910 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BJD96_12215 BlaZ family class A beta-lactamase K18766 blaZ; beta-lactamase class A BlaZ [EC:3.5.2.6] D BJD96_11655 antibiotic ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D BJD96_09135 penicillin-binding protein K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-] D BJD96_06585 penicillin-binding protein K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-] D BJD96_07040 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01502 Vancomycin resistance [PATH:snl01502] D BJD96_04380 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BJD96_07295 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BJD96_04415 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BJD96_04385 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D BJD96_09130 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BJD96_07175 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BJD96_00790 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:snl01503] D BJD96_06210 cell wall amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BJD96_05735 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D BJD96_11560 histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3] D BJD96_11565 DNA-binding response regulator K19078 graR; two-component system, OmpR family, response regulator protein GraR D BJD96_10200 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D BJD96_10195 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D BJD96_10190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D BJD96_10185 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D BJD96_07565 phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D BJD96_08540 aureolysin K01401 aur; aureolysin [EC:3.4.24.29] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:snl01000] C 01001 Protein kinases [BR:snl01001] D BJD96_08590 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D BJD96_04440 anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D BJD96_05930 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D BJD96_06875 two-component sensor histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D BJD96_00120 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D BJD96_11560 histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3] D BJD96_07190 two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D BJD96_03020 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BJD96_04945 two-component sensor histidine kinase K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3] D BJD96_02835 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D BJD96_05265 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D BJD96_04660 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:snl01009] D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BJD96_08595 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:snl01002] D BJD96_09065 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D BJD96_02670 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D BJD96_13040 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D BJD96_03400 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BJD96_09570 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D BJD96_12780 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D BJD96_04020 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D BJD96_04990 protease K05520 yhbO; deglycase [EC:3.5.1.124] D BJD96_01090 choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11] D BJD96_02230 class A sortase SrtA K07284 srtA; sortase A [EC:3.4.22.70] D BJD96_04670 accessory regulator AgrB K07813 agrB; accessory gene regulator B D BJD96_03315 CAAX protease K07052 K07052; CAAX protease family protein D BJD96_04690 CAAX protease K07052 K07052; CAAX protease family protein D BJD96_09760 CAAX protease K07052 K07052; CAAX protease family protein D BJD96_02565 CAAX protease K07052 K07052; CAAX protease family protein D BJD96_11595 hypothetical protein K07052 K07052; CAAX protease family protein D BJD96_09880 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D BJD96_08540 aureolysin K01401 aur; aureolysin [EC:3.4.24.29] D BJD96_00790 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BJD96_10150 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D BJD96_13470 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_05625 dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_01545 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_02135 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_02225 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D BJD96_06790 hypothetical protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D BJD96_11145 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D BJD96_08625 hypothetical protein K12940 abgA; aminobenzoyl-glutamate utilization protein A D BJD96_08635 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D BJD96_12930 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9] D BJD96_01885 peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D BJD96_04930 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D BJD96_06700 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D BJD96_04975 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D BJD96_12560 zinc metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BJD96_05655 peptidase M28 K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7] D BJD96_08350 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D BJD96_01860 peptidase K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D BJD96_05735 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D BJD96_11660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_12250 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_00795 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_11005 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BJD96_10380 peptidase K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D BJD96_07950 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D BJD96_10035 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BJD96_10040 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D BJD96_07165 serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D BJD96_05810 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D BJD96_06600 rhomboid family intramembrane serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105] D BJD96_08395 HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D BJD96_02160 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D BJD96_13000 gamma-glutamyltransferase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126] D BJD96_06310 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D BJD96_06305 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:snl01003] D BJD96_09800 diglucosyl diacylglycerol synthase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D BJD96_07040 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D BJD96_05725 transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28] D BJD96_04995 glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28] D BJD96_11690 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D BJD96_00780 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D BJD96_00785 glycosyl transferase family 1 K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52] D BJD96_11125 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D BJD96_11340 glycosyltransferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-] D BJD96_08440 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein D BJD96_08445 hypothetical protein K25619 yfhO; lipoteichoic acid glycosylation protein C 01005 Lipopolysaccharide biosynthesis proteins [BR:snl01005] D BJD96_11125 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:snl01011] D BJD96_04180 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BJD96_04300 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D BJD96_11170 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D BJD96_05680 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D BJD96_09125 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D BJD96_00695 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D BJD96_09795 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7] D BJD96_04380 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D BJD96_03580 aminoacyltransferase K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16] D BJD96_07455 aminoacyltransferase K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17] D BJD96_07450 aminoacyltransferase K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18] D BJD96_07295 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BJD96_04415 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D BJD96_09220 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D BJD96_09130 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D BJD96_07175 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D BJD96_11445 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_07180 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_13755 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D BJD96_07040 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D BJD96_09135 penicillin-binding protein K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-] D BJD96_06585 penicillin-binding protein K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-] D BJD96_11660 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_12250 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_00795 penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D BJD96_05725 transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28] D BJD96_04995 glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28] D BJD96_00790 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BJD96_03400 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D BJD96_01885 peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D BJD96_02230 class A sortase SrtA K07284 srtA; sortase A [EC:3.4.22.70] D BJD96_06210 cell wall amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:snl01004] D BJD96_08525 [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D BJD96_09945 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D BJD96_09940 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D BJD96_08250 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08470 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_08520 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D BJD96_04305 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D BJD96_09830 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D BJD96_13280 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_05715 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D BJD96_13685 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_12025 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_08530 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D BJD96_07590 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D BJD96_05740 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:snl01006] D BJD96_06740 geranyl transferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D BJD96_06940 heptaprenyl pyrophosphate synthase subunit A K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30] D BJD96_06950 heptaprenyl diphosphate synthase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30] D BJD96_08360 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D BJD96_06085 phytoene synthase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D BJD96_00595 squalene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96] D BJD96_08120 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BJD96_09705 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D BJD96_09355 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:snl01007] D BJD96_12395 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D BJD96_05730 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BJD96_09900 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BJD96_12385 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BJD96_11835 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BJD96_12665 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BJD96_09075 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BJD96_06065 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BJD96_12530 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BJD96_06220 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BJD96_07020 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BJD96_06215 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BJD96_06520 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BJD96_00045 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BJD96_08345 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BJD96_05975 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BJD96_06280 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BJD96_09280 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BJD96_09275 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BJD96_01915 N-succinyldiaminopimelate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117] D BJD96_09680 N-acetyl-L,L-diaminopimelate aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-] D BJD96_11250 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_02510 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D BJD96_12285 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D BJD96_01210 Fis family transcriptional regulator K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D BJD96_10075 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D BJD96_01525 ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D BJD96_01370 4-aminobutyrate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D BJD96_02170 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D BJD96_05045 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D BJD96_06050 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D BJD96_05630 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D BJD96_12110 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D BJD96_01515 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] D BJD96_12885 aminotransferase V K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:snl00194] D BJD96_04290 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D BJD96_04285 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D BJD96_04280 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D BJD96_04275 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D BJD96_04270 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D BJD96_04265 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D BJD96_04260 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D BJD96_04255 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BJD96_04250 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:snl03000] D BJD96_06100 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D BJD96_02695 hypothetical protein K13653 K13653; AraC family transcriptional regulator D BJD96_11370 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D BJD96_06525 CBS domain-containing protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D BJD96_05700 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BJD96_02195 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BJD96_07555 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BJD96_03470 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BJD96_12205 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BJD96_04640 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D BJD96_01020 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D BJD96_12755 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D BJD96_08265 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D BJD96_13585 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D BJD96_04065 transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D BJD96_12445 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D BJD96_01365 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D BJD96_02385 GntR family transcriptional regulator K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor D BJD96_07995 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BJD96_00620 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BJD96_02305 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D BJD96_11430 MarR family transcriptional regulator K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA D BJD96_05575 repressor K20338 rot; MarR family transcriptional regulator, global regulator for virulence D BJD96_03045 MarR family transcriptional regulator K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator D BJD96_02860 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D BJD96_08095 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D BJD96_06840 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BJD96_06575 transcriptional repressor K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D BJD96_05060 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D BJD96_14050 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D BJD96_06240 Rrf2 family transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D BJD96_00165 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D BJD96_13410 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D BJD96_14075 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D BJD96_00150 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D BJD96_04055 transcriptional regulator K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D BJD96_13920 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons D BJD96_01350 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D BJD96_07205 DNA-binding protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D BJD96_02760 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D BJD96_03115 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D BJD96_11970 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D BJD96_11700 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D BJD96_11910 RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D BJD96_03235 RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D BJD96_07010 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D BJD96_01410 transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D BJD96_12635 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D BJD96_01320 transcriptional regulator K02647 cdaR; carbohydrate diacid regulator D BJD96_04625 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D BJD96_08385 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor D BJD96_00875 transcriptional regulator K07727 K07727; putative transcriptional regulator D BJD96_01345 transcriptional regulator K07729 K07729; putative transcriptional regulator D BJD96_07885 hypothetical protein K07729 K07729; putative transcriptional regulator D BJD96_04420 antitoxin MazE K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D BJD96_00820 hypothetical protein K03488 licT; beta-glucoside operon transcriptional antiterminator D BJD96_00770 transcriptional regulator K03480 glcT; transcriptional antiterminator D BJD96_04010 PTS lactose transporter subunit IIB K03483 mtlR; mannitol operon transcriptional activator D BJD96_01675 PTS mannose transporter subunit IIA K02538 manR; mannose operon transcriptional activator D BJD96_04360 CsoR family transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D BJD96_13620 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BJD96_13825 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BJD96_08150 glycerol-3-phosphate responsive antiterminator GlpP K02443 glpP; glycerol uptake operon antiterminator D BJD96_00300 hypothetical protein K02443 glpP; glycerol uptake operon antiterminator D BJD96_06745 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D BJD96_06435 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D BJD96_12425 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response D BJD96_10980 hypothetical protein K05311 cggR; central glycolytic genes regulator D BJD96_09055 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D BJD96_05960 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D BJD96_09740 competence protein ComK K02250 comK; competence protein ComK D BJD96_09150 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:snl03021] D BJD96_03770 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BJD96_12325 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BJD96_12320 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BJD96_04160 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D BJD96_08990 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BJD96_06540 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D BJD96_00685 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D BJD96_04445 RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor D BJD96_12365 RNA polymerase subunit sigma K27000 sigH; RNA polymerase sigma-H factor D BJD96_06725 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D BJD96_12355 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D BJD96_04430 serine/threonine protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D BJD96_04435 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D BJD96_04440 anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D BJD96_06320 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D BJD96_04195 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:snl03019] D BJD96_08510 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BJD96_08275 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-] D BJD96_09485 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D BJD96_08220 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-] D BJD96_10935 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D BJD96_05320 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-] D BJD96_04390 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D BJD96_06555 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D BJD96_11265 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BJD96_06895 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BJD96_10955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BJD96_08280 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D BJD96_04195 transcription termination factor Rho K03628 rho; transcription termination factor Rho D BJD96_05900 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D BJD96_06445 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BJD96_04700 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BJD96_08115 RNA chaperone Hfq K03666 hfq; host factor-I protein D BJD96_02535 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D BJD96_11035 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:snl03011] D BJD96_06920 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D BJD96_08380 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D BJD96_05780 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D BJD96_03725 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D BJD96_13225 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D BJD96_12305 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D BJD96_03710 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D BJD96_03805 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D BJD96_03635 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D BJD96_03765 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D BJD96_12310 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D BJD96_03760 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D BJD96_07965 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BJD96_03705 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D BJD96_08285 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D BJD96_08465 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D BJD96_03685 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D BJD96_13215 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D BJD96_03660 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D BJD96_06420 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D BJD96_06470 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D BJD96_12345 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D BJD96_03655 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D BJD96_03640 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D BJD96_03645 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D BJD96_03700 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D BJD96_03715 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D BJD96_00075 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D BJD96_12340 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D BJD96_12335 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D BJD96_03800 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D BJD96_03690 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D BJD96_03735 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D BJD96_03675 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D BJD96_03775 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D BJD96_03720 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D BJD96_08450 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D BJD96_05995 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D BJD96_06135 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D BJD96_03665 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D BJD96_03650 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D BJD96_03695 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D BJD96_06145 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D BJD96_08570 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D BJD96_03680 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D BJD96_03730 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D BJD96_04200 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D BJD96_09295 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D BJD96_07970 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BJD96_06590 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D BJD96_13850 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D BJD96_05990 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D BJD96_03755 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D BJD96_12610 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D BJD96_12315 ribosomal protein L7Ae K07590 RP-L7A; large subunit ribosomal protein L7A D BJD96_12715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12470 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_03945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12525 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_04535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_05085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_03935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_04525 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_05065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12480 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12465 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12475 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_03940 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_04530 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_05080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:snl03009] D BJD96_08510 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BJD96_06510 GTPase Era K03595 era; GTPase D BJD96_06150 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D BJD96_06725 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D BJD96_12355 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D BJD96_05615 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D BJD96_12650 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BJD96_08605 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D BJD96_12330 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BJD96_09320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D BJD96_06460 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BJD96_13830 16S rRNA (guanine(527)-N(7))-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BJD96_09145 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BJD96_12670 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BJD96_12375 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BJD96_00140 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BJD96_09525 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D BJD96_08600 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BJD96_04890 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D BJD96_06865 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BJD96_09060 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BJD96_05260 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BJD96_09845 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BJD96_00985 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BJD96_04595 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D BJD96_12280 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D BJD96_02105 GNAT family N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D BJD96_08460 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D BJD96_06455 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D BJD96_06290 Holliday junction DNA helicase RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D BJD96_12380 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D BJD96_04390 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D BJD96_06555 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] D BJD96_08585 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D BJD96_06925 ribosome biogenesis GTPase Der K03977 engA; GTPase D BJD96_08435 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D BJD96_08105 GTPase HflX K03665 hflX; GTPase D BJD96_06365 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase D BJD96_04220 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BJD96_06200 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D BJD96_08300 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D BJD96_08335 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D BJD96_00015 RNA-binding protein K14761 rlbA; ribosome-associated protein D BJD96_06390 ribosome silencing factor K09710 ybeB; ribosome-associated protein D BJD96_06495 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D BJD96_06375 RNA-binding protein K07574 yhbY; RNA-binding protein D BJD96_11100 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D BJD96_13245 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D BJD96_09300 DNA-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:snl03016] D BJD96_06815 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D BJD96_07005 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D BJD96_08345 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D BJD96_09075 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D BJD96_12665 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D BJD96_11835 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BJD96_12530 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D BJD96_06220 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BJD96_06280 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D BJD96_07020 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D BJD96_06520 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BJD96_05975 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D BJD96_00045 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D BJD96_12385 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D BJD96_06065 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D BJD96_06215 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D BJD96_09280 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D BJD96_09275 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D BJD96_05730 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BJD96_09900 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D BJD96_06205 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D BJD96_05340 cell-cycle regulation protein HIT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BJD96_05640 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D BJD96_03795 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D BJD96_08295 tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D BJD96_05795 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_06260 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_04220 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D BJD96_08120 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D BJD96_13840 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D BJD96_13835 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D BJD96_13845 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D BJD96_07065 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA D BJD96_12395 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] D BJD96_11375 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D BJD96_12080 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D BJD96_06465 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D BJD96_08405 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D BJD96_08455 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D BJD96_06545 tRNA methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D BJD96_05235 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D BJD96_09285 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D BJD96_06265 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D BJD96_10160 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein D BJD96_06170 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D BJD96_11315 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D BJD96_11320 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D BJD96_01900 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D BJD96_11325 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D BJD96_11225 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D BJD96_05230 tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D BJD96_06175 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D BJD96_05800 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D BJD96_12570 tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D BJD96_04590 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D BJD96_04600 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D BJD96_04585 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D BJD96_06230 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D BJD96_09305 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-] D BJD96_10935 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D BJD96_08280 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:snl03012] D BJD96_08315 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BJD96_05985 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BJD96_04620 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D BJD96_08375 translation elongation factor Ts K02357 tsf; elongation factor Ts D BJD96_12295 translation elongation factor Tu K02358 tuf; elongation factor Tu D BJD96_12300 translation elongation factor G K02355 fusA; elongation factor G D BJD96_04210 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D BJD96_08365 ribosome recycling factor K02838 frr; ribosome recycling factor D BJD96_04215 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D BJD96_12605 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D BJD96_03750 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D BJD96_06705 elongation factor P K02356 efp; elongation factor P D BJD96_11090 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D BJD96_09785 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:snl03110] D BJD96_09955 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D BJD96_12410 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D BJD96_06015 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D BJD96_08390 HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D BJD96_06445 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BJD96_04700 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BJD96_12555 Hsp33 family molecular chaperone K04083 hslO; molecular chaperone Hsp33 D BJD96_06440 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D BJD96_02855 heat-shock protein K13993 HSP20; HSP20 family protein D BJD96_04695 co-chaperone GroES K04078 groES; chaperonin GroES D BJD96_05735 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D BJD96_12560 zinc metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D BJD96_04255 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D BJD96_10090 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D BJD96_05325 peptidylprolyl isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8] D BJD96_09245 thioredoxin K03671 TXN; thioredoxin D BJD96_09505 NrdH-redoxin K03676 grxC; glutaredoxin 3 C 04131 Membrane trafficking [BR:snl04131] D BJD96_06955 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_10975 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BJD96_02720 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_13135 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_05905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:snl03032] D BJD96_07095 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D BJD96_06935 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D BJD96_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D BJD96_00080 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D BJD96_14205 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D BJD96_07850 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D BJD96_08890 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D BJD96_10495 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D BJD96_06535 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D BJD96_05965 helicase DnaB K03346 dnaB; replication initiation and membrane attachment protein D BJD96_05970 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI D BJD96_07835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_04315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_13220 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_10510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_05880 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BJD96_08340 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D BJD96_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BJD96_06415 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BJD96_12695 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BJD96_04905 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BJD96_12740 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BJD96_08430 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D BJD96_09270 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D BJD96_05940 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BJD96_04855 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BJD96_07090 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-] D BJD96_00030 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BJD96_00025 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BJD96_07580 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BJD96_07585 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BJD96_08410 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D BJD96_03620 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:snl03036] D BJD96_08510 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_06935 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D BJD96_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D BJD96_04100 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D BJD96_14055 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D BJD96_08115 RNA chaperone Hfq K03666 hfq; host factor-I protein D BJD96_07995 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BJD96_00620 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BJD96_08505 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D BJD96_06855 segregation protein A K05896 scpA; segregation and condensation protein A D BJD96_06860 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D BJD96_09115 cell division protein FtsA K03590 ftsA; cell division protein FtsA D BJD96_12580 cell division protein DivIC K13052 divIC; cell division protein DivIC D BJD96_08270 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BJD96_05675 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D BJD96_09120 hypothetical protein K03589 ftsQ; cell division protein FtsQ D BJD96_12825 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_13450 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_09370 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_01440 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_09110 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BJD96_09265 cell division protein ZapA K09888 zapA; cell division protein ZapA D BJD96_06210 cell wall amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BJD96_05790 septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator D BJD96_09080 cell division protein DivIVA K04074 divIVA; cell division initiation protein D BJD96_06125 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D BJD96_06130 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D BJD96_04375 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D BJD96_13860 plasmid replication-associated protein K03496 parA; chromosome partitioning protein D BJD96_13955 plasmid replication-associated protein K03496 parA; chromosome partitioning protein D BJD96_13620 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BJD96_13825 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BJD96_07580 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BJD96_07585 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BJD96_13835 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D BJD96_13830 16S rRNA (guanine(527)-N(7))-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BJD96_08405 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D BJD96_08400 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D BJD96_06845 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D BJD96_12590 nucleotide pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein D BJD96_06020 engB; YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein D BJD96_11025 DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:snl03400] D BJD96_02045 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D BJD96_00610 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D BJD96_11990 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D BJD96_03135 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D BJD96_05025 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D BJD96_07030 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D BJD96_05445 nucleoside triphosphatase YtkD K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D BJD96_08830 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BJD96_14265 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BJD96_10435 dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D BJD96_01890 DNA-3-methyladenine glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D BJD96_06060 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D BJD96_05945 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D BJD96_06560 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D BJD96_06190 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D BJD96_04855 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D BJD96_05940 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D BJD96_11065 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D BJD96_11070 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D BJD96_09240 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D BJD96_04850 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D BJD96_12325 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D BJD96_12320 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D BJD96_03770 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D BJD96_04160 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta D BJD96_08990 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D BJD96_12600 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D BJD96_08160 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D BJD96_09250 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 D BJD96_08155 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D BJD96_06730 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D BJD96_06735 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D BJD96_05880 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D BJD96_08340 polC; PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] D BJD96_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D BJD96_06415 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D BJD96_12695 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D BJD96_04905 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D BJD96_12740 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D BJD96_07835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_04315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_13220 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_10510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_06275 RecD/TraA family helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D BJD96_08225 recombinase RecA K03553 recA; recombination protein RecA D BJD96_06165 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D BJD96_08980 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D BJD96_07620 nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50 D BJD96_07625 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D BJD96_12405 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D BJD96_00020 DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D BJD96_08545 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D BJD96_12730 recombination protein RecR K06187 recR; recombination protein RecR D BJD96_06750 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D BJD96_07775 Holliday junction resolvase K03700 recU; recombination protein U D BJD96_07045 Holliday junction resolvase RecU K03700 recU; recombination protein U D BJD96_10025 helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D BJD96_10030 helicase-exonuclease AddAB subunit AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D BJD96_00030 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D BJD96_00025 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D BJD96_08410 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D BJD96_06935 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D BJD96_07870 recombinase RecT K07455 recT; recombination protein RecT D BJD96_11265 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BJD96_06895 recombinase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D BJD96_04900 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D BJD96_07515 DNA repair protein K03502 umuC; DNA polymerase V D BJD96_07950 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D BJD96_05000 recombination regulator RecX K03565 recX; regulatory protein D BJD96_09255 DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X) D BJD96_07015 ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D BJD96_11210 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D BJD96_11205 class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D BJD96_05875 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:snl03029] D BJD96_08315 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D BJD96_05985 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D BJD96_08375 translation elongation factor Ts K02357 tsf; elongation factor Ts D BJD96_12295 translation elongation factor Tu K02358 tuf; elongation factor Tu D BJD96_12300 translation elongation factor G K02355 fusA; elongation factor G D BJD96_06510 GTPase Era K03595 era; GTPase D BJD96_05730 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D BJD96_06220 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D BJD96_06520 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D BJD96_11835 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D BJD96_04875 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D BJD96_04880 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D BJD96_04870 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D BJD96_07835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_04315 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_13220 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_10510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D BJD96_06445 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BJD96_06440 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D BJD96_04700 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BJD96_04695 co-chaperone GroES K04078 groES; chaperonin GroES D BJD96_05795 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_06260 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_09355 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D BJD96_09360 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D BJD96_04345 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:snl02000] D BJD96_05035 multidrug ABC transporter ATP-binding protein K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-] D BJD96_02280 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D BJD96_02285 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D BJD96_11655 antibiotic ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D BJD96_12160 multidrug ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D BJD96_11435 thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D BJD96_11440 cysteine ABC transporter ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D BJD96_01820 macrolide efflux ABC transporter Msr(A) K18231 msr; macrolide transport system ATP-binding/permease protein D BJD96_11270 heme ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D BJD96_03490 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D BJD96_03495 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D BJD96_03500 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D BJD96_01510 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D BJD96_01505 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D BJD96_01500 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D BJD96_09430 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D BJD96_13700 glycine/betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein D BJD96_13705 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D BJD96_11255 glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein D BJD96_02630 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D BJD96_02635 amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D BJD96_02625 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D BJD96_02620 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D BJD96_07535 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D BJD96_07540 rbsC; ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D BJD96_07545 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D BJD96_00305 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D BJD96_00310 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D BJD96_00315 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D BJD96_00320 sugar ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D BJD96_02575 iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D BJD96_02570 methionine ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D BJD96_07345 thioredoxine reductase K02040 pstS; phosphate transport system substrate-binding protein D BJD96_07350 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D BJD96_07355 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D BJD96_07360 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D BJD96_03435 amino acid ABC transporter substrate-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein D BJD96_03430 amino acid ABC transporter permease K16958 tcyL; L-cystine transport system permease protein D BJD96_03425 ABC transporter permease K16959 tcyM; L-cystine transport system permease protein D BJD96_03440 amino acid ABC transporter ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D BJD96_05220 glutamate ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D BJD96_01665 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D BJD96_10605 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D BJD96_10610 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein D BJD96_10615 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D BJD96_09905 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D BJD96_09925 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein D BJD96_09920 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D BJD96_09915 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D BJD96_09910 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D BJD96_01790 nickel ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D BJD96_01795 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D BJD96_01800 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D BJD96_01805 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D BJD96_01810 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D BJD96_03870 iron citrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein D BJD96_13305 iron citrate ABC transporter substrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein D BJD96_03880 fecD; iron-dicitrate transporter subunit FecD K23182 fecD; ferric citrate transport system permease protein D BJD96_03875 iron-siderophore ABC transporter permease K23183 fecC; ferric citrate transport system permease protein D BJD96_03450 ferrichrome ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein D BJD96_01815 ferrichrome ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein D BJD96_11635 iron ABC transporter K25288 fhuB; ferric hydroxamate/heme transport system permease protein D BJD96_11630 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein D BJD96_11640 iron-enterobactin transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16] D BJD96_11185 iron ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D BJD96_11195 iron ABC transporter permease K25283 yclO; iron-siderophore transport system permease protein D BJD96_11200 iron ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein D BJD96_11190 iron ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D BJD96_02480 iron-siderophore ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D BJD96_11825 Vitamin B12 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D BJD96_11820 enterobactin ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D BJD96_04030 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D BJD96_11715 manganese ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein D BJD96_01425 zinc ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein D BJD96_11710 manganese ABC transporter permease K19976 mntB; manganese transport system permease protein D BJD96_01430 manganese ABC transporter permease K19976 mntB; manganese transport system permease protein D BJD96_01435 manganese ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D BJD96_11705 phosphonate ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D BJD96_02295 ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D BJD96_06570 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D BJD96_06565 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D BJD96_03455 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D BJD96_02175 transporter K16926 htsT; energy-coupling factor transport system substrate-specific component D BJD96_03790 transporter K16785 ecfT; energy-coupling factor transport system permease protein D BJD96_09545 cobalt ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein D BJD96_02180 ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein D BJD96_03780 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BJD96_03785 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BJD96_09540 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BJD96_02185 ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D BJD96_09535 thiamine ABC transporter permease K16925 ykoE; energy-coupling factor transport system permease protein D BJD96_11680 teichoic acid ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D BJD96_05015 sugar ABC transporter permease K09692 tagG; teichoic acid transport system permease protein D BJD96_11685 teichoic acid export protein ATP-binding subunit K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D BJD96_05010 teichoic acid ABC transporter ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4] D BJD96_03030 heme ABC transporter permease K09813 hrtB; hemin transport system permease protein D BJD96_03035 hemin ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D BJD96_01480 ABC transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein D BJD96_01475 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein D BJD96_01485 multidrug ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein D BJD96_01945 bacitracin ABC transporter permease K11632 bceB; bacitracin transport system permease protein D BJD96_01940 bacitracin ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein D BJD96_13415 ABC transporter permease K25149 narB; polyether ionophore transport system permease protein D BJD96_13420 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein D BJD96_05350 multidrug ABC transporter ATP-binding protein K25157 ecsB; ABC-2 type transport system permease protein D BJD96_05345 multidrug ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein D BJD96_03155 sodium ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D BJD96_13110 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BJD96_13345 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BJD96_04740 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D BJD96_01725 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D BJD96_11580 amino acid transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D BJD96_11585 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_03150 sodium ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_13100 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_13340 lantibiotic ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_04725 sodium ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_04735 antibiotic ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_01720 glycosyl transferase family 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_13105 bacitracin ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D BJD96_01120 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D BJD96_01115 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D BJD96_10590 Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D BJD96_04800 C4-dicarboxylate ABC transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D BJD96_01965 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D BJD96_01240 D-xylose transporter XylE K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D BJD96_00410 MFS transporter K06610 iolF; MFS transporter, SP family, inositol transporter D BJD96_07400 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D BJD96_12005 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D BJD96_02345 glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D BJD96_12890 permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D BJD96_01355 transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D BJD96_13810 glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D BJD96_02845 nitrate transporter NarT K10850 narT; MFS transporter, NNP family, putative nitrate transporter D BJD96_02700 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D BJD96_11390 multidrug MFS transporter K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein D BJD96_02580 chloramphenicol resistance protein K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump D BJD96_11500 arabinose transporter permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D BJD96_12975 arabinose ABC transporter permease K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D BJD96_03855 multidrug MFS transporter K23448 sfaA; MFS transporter, DHA1 family, staphyloferrin A biosynthesis exporter D BJD96_09935 MFS transporter permease K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B D BJD96_02645 quinolone resistance protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_00890 quinolone resistance protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_02020 quinolone resistance protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_00110 multidrug MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D BJD96_03925 multidrug MFS transporter K18934 lmrS; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_12970 multidrug MFS transporter K18934 lmrS; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_03915 multidrug MFS transporter K18935 sdrM; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_02725 drug:proton antiporter K18936 mdeA; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_01180 MFS transporter permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D BJD96_09510 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D BJD96_09515 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D BJD96_07155 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D BJD96_00775 PTS glucose transporter subunit IICBA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D BJD96_05745 PTS glucose transporter subunit IIBC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D BJD96_01590 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D BJD96_03295 permease K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D BJD96_02900 PTS maltose transporter subunit IIBC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D BJD96_00815 PTS beta-glucoside transporter subunit IIABC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D BJD96_00655 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D BJD96_12765 trehalose permease IIC protein K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D BJD96_03240 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D BJD96_11915 PTS alpha-glucoside transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D BJD96_11360 PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D BJD96_04005 PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D BJD96_04015 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D BJD96_00720 PTS mannose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D BJD96_00710 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D BJD96_00715 PTS lactose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D BJD96_00955 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D BJD96_00950 PTS galactitol transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D BJD96_00945 PTS galactitol transporter subunit IIC K02775 gatC; galactitol PTS system EIIC component D BJD96_01680 PTS mannose transporter subunit IIABC K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191] D BJD96_01640 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D BJD96_01645 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D BJD96_01650 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D BJD96_11615 PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D BJD96_08140 aquaporin K02440 glpF; glycerol uptake facilitator D BJD96_07615 mechanosensitive ion channel protein MscL K03282 mscL; large conductance mechanosensitive channel D BJD96_13255 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D BJD96_13750 magnesium transporter K06213 mgtE; magnesium transporter D BJD96_09840 magnesium transporter K06213 mgtE; magnesium transporter D BJD96_01785 urea transporter K08717 utp; urea transporter D BJD96_05480 camphor resistance protein CrcB K06199 crcB; fluoride exporter D BJD96_05485 camphor resistance protein CrcB K06199 crcB; fluoride exporter D BJD96_10260 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D BJD96_11350 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BJD96_02085 holin K06518 cidA; holin-like protein D BJD96_00850 melibiose:sodium transporter MelB K11104 melB; melibiose permease D BJD96_05980 gamma-aminobutyrate permease K11733 lysP; lysine-specific permease D BJD96_05910 gamma-aminobutyrate permease K11737 cycA; D-serine/D-alanine/glycine transporter D BJD96_04050 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D BJD96_11275 dihydroorotate dehydrogenase K07238 TC.ZIP; zinc transporter, ZIP family D BJD96_03370 multidrug resistance protein SMR K18924 ykkC; paired small multidrug resistance pump D BJD96_13155 multidrug resistance protein SMR K18924 ykkC; paired small multidrug resistance pump D BJD96_13150 transporter K18925 ykkD; paired small multidrug resistance pump D BJD96_03610 glucose transporter K05340 glcU; glucose uptake protein D BJD96_07075 chloramphenicol-sensitivity protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD D BJD96_11780 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D BJD96_10145 sodium:proton antiporter K07084 yuiF; putative amino acid transporter D BJD96_01565 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BJD96_02395 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BJD96_13580 2-keto-3-deoxygluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D BJD96_01310 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D BJD96_01575 lactate permease K03303 lutP; lactate permease D BJD96_03005 L-lactate permease K03303 lutP; lactate permease D BJD96_03830 choline transporter K05020 opuD; glycine betaine transporter D BJD96_08680 choline transporter K05020 opuD; glycine betaine transporter D BJD96_09195 choline transporter K05020 opuD; glycine betaine transporter D BJD96_13780 choline transporter K05020 opuD; glycine betaine transporter D BJD96_02050 choline transporter K05020 opuD; glycine betaine transporter D BJD96_01990 glycine/betaine ABC transporter permease K05020 opuD; glycine betaine transporter D BJD96_00485 sodium:pantothenate symporter K14392 panF; sodium/pantothenate symporter D BJD96_04865 sodium/proline symporter K11928 putP; sodium/proline symporter D BJD96_02335 sodium/proline symporter K11928 putP; sodium/proline symporter D BJD96_02880 glutamate:protein symporter K11102 gltP; proton glutamate symport protein D BJD96_03110 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D BJD96_03390 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D BJD96_02075 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D BJD96_11720 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D BJD96_09770 Ktr system potassium uptake protein D K03498 trkH; trk/ktr system potassium uptake protein D BJD96_09490 potassium transporter Trk K03499 trkA; trk/ktr system potassium uptake protein D BJD96_12960 allantoin permease K10975 allP; allantoin permease D BJD96_09050 uracil permease K02824 uraA; uracil permease D BJD96_13050 xanthine permease K16169 pbuX; xanthine permease D BJD96_03625 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D BJD96_12430 nucleoside permease K11535 nupC; nucleoside transport protein D BJD96_01600 pyrimidine nucleoside transporter NupC K11535 nupC; nucleoside transport protein D BJD96_11650 nucleoside permease K16323 yxjA; purine nucleoside transport protein D BJD96_11965 ChrA protein K07240 chrA; chromate transporter D BJD96_03205 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D BJD96_01935 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D BJD96_09410 divalent metal cation transporter K03322 mntH; manganese transport protein D BJD96_12150 manganese transporter K03322 mntH; manganese transport protein D BJD96_02910 Na/Pi cotransporter K03324 yjbB; phosphate:Na+ symporter D BJD96_00160 arsenic transporter K03893 arsB; arsenical pump membrane protein D BJD96_13405 arsenic transporter K03893 arsB; arsenical pump membrane protein D BJD96_10705 arsenic resistance protein K03325 ACR3; arsenite transporter D BJD96_11755 cation:proton antiporter K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D BJD96_10100 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D BJD96_10105 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D BJD96_11750 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D BJD96_10110 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D BJD96_11745 antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D BJD96_11740 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D BJD96_10115 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D BJD96_11735 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D BJD96_10120 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D BJD96_11730 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D BJD96_10125 Na(+)/H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D BJD96_11725 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D BJD96_10130 Na+/H+ antiporter subunit G1 K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D BJD96_03595 malonate transporter K24180 mleP; malate permease and related proteins D BJD96_01000 transporter K24180 mleP; malate permease and related proteins D BJD96_01075 permease K24180 mleP; malate permease and related proteins D BJD96_11465 lysine transporter LysE K06895 lysE; L-lysine exporter family protein LysE/ArgO D BJD96_00050 azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump D BJD96_00055 hypothetical protein K26606 azlD; branched chain amino acid efflux pump D BJD96_13795 transporter K07793 tctA; putative tricarboxylic transport membrane protein D BJD96_13800 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D BJD96_06880 riboflavin transporter RibU K23675 fmnP; riboflavin transporter D BJD96_07105 hypothetical protein K09125 yhhQ; queuosine precursor transporter D BJD96_12825 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_13450 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_09370 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_01440 cell division protein FtsW K03588 ftsW; cell division protein FtsW D BJD96_02810 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02815 nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D BJD96_02825 respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D BJD96_13770 ferrous iron transporter A K04758 feoA; ferrous iron transport protein A D BJD96_13775 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D BJD96_00575 TspO protein K05770 TSPO; translocator protein D BJD96_13790 methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D BJD96_02955 copper resistance protein CopC K14166 ycnJ; copper transport protein C 02044 Secretion system [BR:snl02044] D BJD96_09090 cell division protein K02221 yggT; YggT family protein D BJD96_06400 hypothetical protein K02237 comEA; competence protein ComEA D BJD96_06405 ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12] D BJD96_06410 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D BJD96_11110 DNA/RNA helicase K02240 comFA; competence protein ComFA D BJD96_11105 amidophosphoribosyltransferase K02242 comFC; competence protein ComFC D BJD96_06625 competence protein ComGA K02243 comGA; competence protein ComGA D BJD96_06630 competence protein ComG K02244 comGB; competence protein ComGB D BJD96_06635 competence protein ComGC K02245 comGC; competence protein ComGC D BJD96_06640 competence protein K02246 comGD; competence protein ComGD D BJD96_06075 hypothetical protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D BJD96_09740 competence protein ComK K02250 comK; competence protein ComK D BJD96_11095 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D BJD96_06185 protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein D BJD96_12360 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D BJD96_10945 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D BJD96_03740 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D BJD96_08490 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D BJD96_08500 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D BJD96_06180 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D BJD96_04345 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:snl02042] D BJD96_01205 permease K11041 eta; exfoliative toxin A/B D BJD96_10260 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D BJD96_11350 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D BJD96_03910 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:snl02022] D BJD96_05930 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D BJD96_05925 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D BJD96_06875 two-component sensor histidine kinase K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3] D BJD96_06870 DNA-binding response regulator K07775 resD; two-component system, OmpR family, response regulator ResD D BJD96_00120 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] D BJD96_00115 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR D BJD96_11560 histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3] D BJD96_11565 DNA-binding response regulator K19078 graR; two-component system, OmpR family, response regulator protein GraR D BJD96_07190 two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3] D BJD96_07185 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR D BJD96_03020 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D BJD96_03025 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D BJD96_04945 two-component sensor histidine kinase K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3] D BJD96_04950 DNA-binding response regulator K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR D BJD96_02835 two-component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3] D BJD96_02840 DNA-binding response regulator K07696 nreC; two-component system, NarL family, response regulator NreC D BJD96_05265 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D BJD96_05270 DNA-binding response regulator K02479 K02479; two-component system, NarL family, response regulator D BJD96_00450 two-component system response regulator DcuR K11615 malR; two-component system, CitB family, response regulator MalR D BJD96_04660 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3] D BJD96_04655 DNA-binding response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA C 02035 Bacterial motility proteins C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:snl04812] D BJD96_09110 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BJD96_09115 cell division protein FtsA K03590 ftsA; cell division protein FtsA D BJD96_13860 plasmid replication-associated protein K03496 parA; chromosome partitioning protein D BJD96_13955 plasmid replication-associated protein K03496 parA; chromosome partitioning protein D BJD96_13620 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BJD96_13825 nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:snl04147] D BJD96_01395 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D BJD96_10955 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D BJD96_10975 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D BJD96_10970 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D BJD96_05905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D BJD96_07390 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D BJD96_04700 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D BJD96_06445 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D BJD96_10050 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D BJD96_13045 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D BJD96_12295 translation elongation factor Tu K02358 tuf; elongation factor Tu D BJD96_05340 cell-cycle regulation protein HIT K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D BJD96_05570 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_01670 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D BJD96_13685 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_12025 acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D BJD96_12020 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_02060 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D BJD96_03745 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D BJD96_06195 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D BJD96_10060 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D BJD96_10055 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D BJD96_03475 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D BJD96_08135 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D BJD96_08090 type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D BJD96_06045 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D BJD96_03285 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D BJD96_05755 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D BJD96_09555 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D BJD96_09445 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06760 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D BJD96_06810 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D BJD96_10965 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D BJD96_02720 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D BJD96_13135 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:snl02048] D BJD96_13975 restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D BJD96_13990 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D BJD96_13985 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D BJD96_05825 adenine methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D BJD96_14295 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D BJD96_04425 PemK family transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D BJD96_04420 antitoxin MazE K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D BJD96_14100 addiction module protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D BJD96_14095 prevent-host-death protein K19159 yefM; antitoxin YefM D BJD96_13330 death-on-curing protein K07341 doc; death on curing protein D BJD96_09110 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D BJD96_07580 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D BJD96_07585 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D BJD96_05795 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D BJD96_06260 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:snl01504] D BJD96_01820 macrolide efflux ABC transporter Msr(A) K18231 msr; macrolide transport system ATP-binding/permease protein D BJD96_12215 BlaZ family class A beta-lactamase K18766 blaZ; beta-lactamase class A BlaZ [EC:3.5.2.6] D BJD96_00790 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D BJD96_11430 MarR family transcriptional regulator K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA D BJD96_11560 histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3] D BJD96_11565 DNA-binding response regulator K19078 graR; two-component system, OmpR family, response regulator protein GraR D BJD96_10200 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] D BJD96_10195 D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export D BJD96_10190 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13] D BJD96_10185 D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein D BJD96_07565 phosphatidylglycerol lysyltransferase K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D BJD96_11655 antibiotic ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2] D BJD96_02645 quinolone resistance protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_00890 quinolone resistance protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein D BJD96_02020 quinolone resistance protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:snl00537] D BJD96_03285 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:snl03100] D BJD96_12485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BJD96_05130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BJD96_05075 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D BJD96_11010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_12495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_05120 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_09205 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D BJD96_05405 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BJD96_09735 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BJD96_03950 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D BJD96_05385 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BJD96_00100 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BJD96_05160 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D BJD96_05195 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D BJD96_03970 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BJD96_05190 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D BJD96_05410 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BJD96_00095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BJD96_03955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D BJD96_05110 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05400 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_12505 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_04520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05200 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D BJD96_05185 tRNA-His K14226 tRNA-His; tRNA His D BJD96_05395 tRNA-His K14226 tRNA-His; tRNA His D BJD96_12460 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BJD96_05070 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D BJD96_05210 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_12500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_04515 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_05115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_05105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D BJD96_05100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BJD96_12510 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BJD96_03975 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D BJD96_05380 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05135 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05140 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05155 tRNA-Met K14230 tRNA-Met; tRNA Met D BJD96_05390 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BJD96_05165 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D BJD96_12490 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BJD96_05125 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D BJD96_05150 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_09730 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_05415 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_12770 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_05145 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D BJD96_05170 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BJD96_05095 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BJD96_12515 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D BJD96_05180 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D BJD96_05175 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BJD96_03965 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D BJD96_12520 tRNA-Val K14237 tRNA-Val; tRNA Val D BJD96_05090 tRNA-Val K14237 tRNA-Val; tRNA Val D BJD96_03960 tRNA-Val K14237 tRNA-Val; tRNA Val D BJD96_03935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_04525 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_05065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12480 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12465 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12725 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D BJD96_12455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12720 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12475 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_03940 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_04530 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_05080 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D BJD96_12715 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12450 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12470 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_03945 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12525 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_04535 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_05085 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D BJD96_12750 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA D BJD96_07065 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA D BJD96_10925 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D BJD96_02610 3-hydroxybutyryl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108] D BJD96_01570 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D BJD96_11865 oxidoreductase K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-] D BJD96_02935 erythritol/L-threitol dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-] D BJD96_03385 octopine dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28] D BJD96_00275 NADP-dependent oxidoreductase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5] D BJD96_03820 NADP-dependent oxidoreductase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5] D BJD96_09995 CoA-disulfide reductase K08255 cdr; CoA-disulfide reductase [EC:1.8.1.14] D BJD96_13120 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D BJD96_06905 hypothetical protein K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-] D BJD96_07530 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D BJD96_01015 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D BJD96_07145 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D BJD96_07150 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D BJD96_00370 hypothetical protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D BJD96_05050 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D BJD96_05820 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D BJD96_13115 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D BJD96_10655 peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D BJD96_00835 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D BJD96_13610 nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D BJD96_00480 5,10-methylene tetrahydromethanopterin reductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D BJD96_04910 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D BJD96_02970 thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D BJD96_00155 arsenate reductase (thioredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D BJD96_01085 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D BJD96_07440 SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D BJD96_07070 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D BJD96_02990 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D BJD96_12845 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D BJD96_02780 GNAT family N-acetyltransferase K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-] D BJD96_00255 GNAT family N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D BJD96_09200 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D BJD96_05710 acetoin dehydrogenase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-] D BJD96_13200 phosphinothricin acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D BJD96_07000 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D BJD96_01295 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D BJD96_11055 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D BJD96_08560 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D BJD96_01330 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D BJD96_06530 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D BJD96_11130 hypothetical protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D BJD96_03985 TIGR00159 family protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D BJD96_03905 uridylyltransferase K11442 K11442; putative uridylyltransferase [EC:2.7.7.-] D BJD96_11060 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D BJD96_12415 protein arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D BJD96_12880 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D BJD96_10940 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D BJD96_09640 methicillin resistance protein FmtA K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103] D BJD96_02070 lactonase K02352 drp35; lactonase [EC:3.1.1.-] D BJD96_02640 tributyrin esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-] D BJD96_02615 thioesterase K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33] D BJD96_03095 3-hydroxyacyl-CoA dehydrogenase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D BJD96_07600 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D BJD96_06360 hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-] D BJD96_00070 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59] D BJD96_12660 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D BJD96_08055 thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D BJD96_10825 hypothetical protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D BJD96_02895 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BJD96_08690 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BJD96_13185 amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D BJD96_08615 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BJD96_09470 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D BJD96_12050 bacillithiol biosynthesis deacetylase BshB2 K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-] D BJD96_12630 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D BJD96_04225 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2] D BJD96_05375 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D BJD96_07100 esterase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D BJD96_00470 pyruvate decarboxylase K27601 kdcA; branched-chain-2-oxoacid decarboxylase [EC:4.1.1.72] D BJD96_13240 PadR family transcriptional regulator K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-] D BJD96_14025 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D BJD96_00035 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D BJD96_01300 TIGR00268 family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D BJD96_01290 TIGR00299 family protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D BJD96_00405 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D BJD96_02145 poly-gamma-glutamate synthase PgsB K01932 capB; gamma-polyglutamate synthase [EC:6.3.2.-] D BJD96_04140 ATP-grasp domain-containing protein K27344 ldmS; L-aspartate-L-methionine ligase [EC:6.3.2.-] D BJD96_10770 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D BJD96_14065 copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D BJD96_05705 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC D BJD96_09155 bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase C 99982 Energy metabolism D BJD96_03465 sufurtransferase FdhD K02379 fdhD; FdhD protein D BJD96_12910 acyl-CoA synthetase FdrA K02381 fdrA; FdrA protein D BJD96_06885 ferredoxin K05337 fer; ferredoxin D BJD96_10575 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D BJD96_07250 hypothetical protein K04748 norQ; nitric oxide reductase NorQ protein D BJD96_13165 dihydrolipoamide dehydrogenase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase C 99983 Lipid metabolism D BJD96_07140 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit D BJD96_11115 fatty acid-binding protein DegV K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D BJD96_11215 ribonucleotide reductase assembly protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D BJD96_09100 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D BJD96_13905 hypothetical protein K21462 icaC; probable poly-beta-1,6-N-acetyl-D-glucosamine export protein D BJD96_12235 hypothetical protein K21462 icaC; probable poly-beta-1,6-N-acetyl-D-glucosamine export protein C 99987 Cofactor metabolism D BJD96_03530 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D BJD96_08630 p-aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein D BJD96_00675 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein D BJD96_00680 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others D BJD96_00550 serine/threonine protein phosphatase K22390 ACP7; acid phosphatase type 7 D BJD96_02310 glyoxalase K15975 K15975; glyoxalase family protein D BJD96_02315 ring-cleaving dioxygenase K15975 K15975; glyoxalase family protein D BJD96_01110 glyoxalase K15975 K15975; glyoxalase family protein D BJD96_01155 hypothetical protein K15977 K15977; putative oxidoreductase D BJD96_02320 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D BJD96_07125 hypothetical protein K26958 brxA_B; bacilliredoxin D BJD96_06780 hypothetical protein K26958 brxA_B; bacilliredoxin D BJD96_11155 bacillithiol system protein YtxJ K26959 brxC; monothiol bacilliredoxin B B 09192 Unclassified: genetic information processing C 99973 Transcription D BJD96_07285 cold-shock protein K03704 cspA; cold shock protein D BJD96_12980 cold-shock protein K03704 cspA; cold shock protein D BJD96_09895 transcriptional regulator Spx K16509 spxA; regulatory protein spx D BJD96_04450 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D BJD96_10085 general stress protein K07570 GSP13; general stress protein 13 D BJD96_12575 RNA-binding protein S1 K07571 K07571; S1 RNA binding domain protein C 99975 Protein processing D BJD96_12420 excinuclease ABC subunit B K19411 mcsA; protein arginine kinase activator D BJD96_06010 trigger factor K03545 tig; trigger factor D BJD96_01765 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D BJD96_01760 urease accessory protein UreF K03188 ureF; urease accessory protein D BJD96_01755 urease accessory protein UreG K03189 ureG; urease accessory protein D BJD96_01750 urease accessory protein UreD K03190 ureD; urease accessory protein D BJD96_10930 SsrA-binding protein K03664 smpB; SsrA-binding protein D BJD96_01145 dithiol-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase D BJD96_09890 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D BJD96_06110 hypothetical protein K03630 radC; DNA repair protein RadC D BJD96_00195 DNA recombinase K03630 radC; DNA repair protein RadC D BJD96_11830 endonuclease III K07457 K07457; endonuclease III related protein D BJD96_12675 hypothetical protein K07461 K07461; putative endonuclease D BJD96_08415 DNA protecting protein DprA K04096 smf; DNA processing protein D BJD96_07025 DNA replication protein DnaD K02086 dnaD; DNA replication protein D BJD96_10625 topiosmerase K07476 yusF; toprim domain protein D BJD96_06235 recombinase RarA K07478 ycaJ; putative ATPase D BJD96_00440 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D BJD96_05935 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D BJD96_02270 IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D BJD96_14110 transposase K07496 K07496; putative transposase D BJD96_13935 IS6 family transposase K07498 K07498; putative transposase D BJD96_14090 IS6 family transposase K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D BJD96_12735 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D BJD96_01220 galactose:cation symporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D BJD96_02415 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D BJD96_02440 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D BJD96_03280 gamma-aminobutyrate permease K03293 TC.AAT; amino acid transporter, AAT family D BJD96_07985 gamma-aminobutyrate permease K03293 TC.AAT; amino acid transporter, AAT family D BJD96_13760 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BJD96_02590 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D BJD96_03585 multidrug transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D BJD96_02585 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D BJD96_01405 choline transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D BJD96_11230 peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D BJD96_11235 peptide ABC transporter permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D BJD96_11550 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D BJD96_07385 solute:sodium symporter family transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D BJD96_13710 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D BJD96_02255 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D BJD96_12865 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D BJD96_07575 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D BJD96_12950 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D BJD96_09820 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D BJD96_07260 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D BJD96_12870 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D BJD96_03250 symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D BJD96_00745 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth D BJD96_06325 allophanate hydrolase K06351 kipI; inhibitor of KinA D BJD96_00215 recombinase RecB K06400 spoIVCA; site-specific DNA recombinase D BJD96_12625 septation protein SpoVG K06412 spoVG; stage V sporulation protein G C 99993 Cell motility C 99995 Signaling proteins D BJD96_09385 GTP-binding protein TypA K06207 typA; GTP-binding protein D BJD96_06490 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D BJD96_13230 lysozyme K07273 acm; lysozyme D BJD96_02155 capsule biosynthesis protein CapA K07282 capA; gamma-polyglutamate biosynthesis protein CapA D BJD96_02150 poly-gamma-glutamate biosynthesis protein PgsC K22116 capC; gamma-polyglutamate biosynthesis protein CapC D BJD96_06030 cytochrome C assembly protein K02497 hemX; HemX protein D BJD96_03050 hypothetical protein K21463 tcaA; membrane-associated protein TcaA D BJD96_01620 hypothetical protein K21463 tcaA; membrane-associated protein TcaA C 99994 Others D BJD96_07365 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D BJD96_05850 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D BJD96_13915 hypothetical protein K26996 sdpI; immunity protein, SdpI family B B 09194 Poorly characterized C 99996 General function prediction only D BJD96_10715 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D BJD96_09885 hypothetical protein K06198 coiA; competence protein CoiA D BJD96_05670 tRNA-binding protein K06878 K06878; tRNA-binding protein D BJD96_09870 globin K06886 glbN; hemoglobin D BJD96_02010 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily D BJD96_11815 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D BJD96_09165 noncanonical pyrimidine nucleotidase, YjjG family K07025 K07025; putative hydrolase of the HAD superfamily D BJD96_10570 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D BJD96_10585 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D BJD96_03900 hypothetical protein K07038 K07038; inner membrane protein D BJD96_05020 metal-dependent hydrolase K07038 K07038; inner membrane protein D BJD96_04955 hypothetical protein K07058 K07058; membrane protein D BJD96_01005 hypothetical protein K07146 K07146; UPF0176 protein D BJD96_04605 hypothetical protein K04750 phnB; PhnB protein D BJD96_12945 phosphatase K15640 K15640; uncharacterized phosphatase D BJD96_00530 phage infection protein K01421 yhgE; putative membrane protein D BJD96_01055 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein D BJD96_10595 DUF368 domain-containing protein K08974 K08974; putative membrane protein D BJD96_09350 hypothetical protein K08976 K08976; putative membrane protein D BJD96_04400 hypothetical protein K08981 K08981; putative membrane protein C 99997 Function unknown D BJD96_11850 hypothetical protein K06885 K06885; uncharacterized protein D BJD96_11540 hypothetical protein K06890 K06890; uncharacterized protein D BJD96_11395 hypothetical protein K06934 K06934; uncharacterized protein D BJD96_04350 phosphohydrolase K06950 K06950; uncharacterized protein D BJD96_13075 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein D BJD96_12370 hypothetical protein K06962 K06962; uncharacterized protein D BJD96_06990 zinc metallopeptidase K06973 K06973; uncharacterized protein D BJD96_02290 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein D BJD96_05215 hypothetical protein K07035 K07035; uncharacterized protein D BJD96_01385 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein D BJD96_01905 hypothetical protein K07035 K07035; uncharacterized protein D BJD96_11000 TIGR01777 family protein K07071 K07071; uncharacterized protein D BJD96_04680 nitroreductase K07078 K07078; uncharacterized protein D BJD96_00180 permease K07089 K07089; uncharacterized protein D BJD96_13395 hypothetical protein K07090 K07090; uncharacterized protein D BJD96_13500 hypothetical protein K07090 K07090; uncharacterized protein D BJD96_00645 hypothetical protein K07090 K07090; uncharacterized protein D BJD96_01125 permease K07090 K07090; uncharacterized protein D BJD96_05805 hypothetical protein K07090 K07090; uncharacterized protein D BJD96_10245 hypothetical protein K07090 K07090; uncharacterized protein D BJD96_09210 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein D BJD96_04630 hypothetical protein K07112 K07112; uncharacterized protein D BJD96_06055 aminopeptidase K07120 K07120; uncharacterized protein D BJD96_06825 short-chain dehydrogenase K07124 K07124; uncharacterized protein D BJD96_05585 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D BJD96_13575 hypothetical protein K07148 K07148; uncharacterized protein D BJD96_10020 hypothetical protein K07148 K07148; uncharacterized protein D BJD96_05440 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D BJD96_11520 hypothetical protein K09145 K09145; uncharacterized protein D BJD96_04405 hypothetical protein K09167 K09167; uncharacterized protein D BJD96_04395 hypothetical protein K09167 K09167; uncharacterized protein D BJD96_11530 cupin K09705 K09705; uncharacterized protein D BJD96_06850 hypothetical protein K09763 K09763; uncharacterized protein D BJD96_11455 hypothetical protein K09768 K09768; uncharacterized protein D BJD96_08495 DNA-binding protein K09787 K09787; uncharacterized protein D BJD96_11505 hypothetical protein K09793 K09793; uncharacterized protein D BJD96_07340 RNA-binding protein K00243 K00243; uncharacterized protein D BJD96_13265 hypothetical protein K09822 K09822; uncharacterized protein D BJD96_03380 hypothetical protein K09940 K09940; uncharacterized protein D BJD96_07895 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein D BJD96_09960 DUF4440 domain-containing protein K09958 K09958; uncharacterized protein D BJD96_03305 outer surface protein K09963 K09963; uncharacterized protein D BJD96_00730 outer surface protein K09963 K09963; uncharacterized protein D BJD96_07935 hypothetical protein K09976 K09976; uncharacterized protein D BJD96_12875 iron chaperone K05937 K05937; uncharacterized protein D BJD96_06140 hypothetical protein K07584 ysxB; uncharacterized protein D BJD96_11555 hypothetical protein K07220 K07220; uncharacterized protein D BJD96_05030 hypothetical protein K07586 ygaC; uncharacterized protein D BJD96_08325 DNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 18, 2024