+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptomyces noursei ATCC 11455
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D SNOUR_13740 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D SNOUR_26420 orn; exoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
D SNOUR_37945 ATPase central domain-containing protein K13525 VCP; transitional endoplasmic reticulum ATPase
C Other pre-60S particles
B Other ribosome biogenesis factors
C SNOUR_27625 era; GTPase Era K03595 era; GTPase
C SNOUR_27350 obg; GTPase obg K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C SNOUR_29995 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
C SNOUR_13310 nusA; NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
C SNOUR_33015 nusB; NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
C SNOUR_23180 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D SNOUR_24635 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SNOUR_33105 May act as RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SNOUR_13765 putative RNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SNOUR_27555 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SNOUR_21200 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SNOUR_29910 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SNOUR_24615 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SNOUR_31385 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D SNOUR_10280 rlmAII; 23S rRNA methyl transferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D SNOUR_18180 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SNOUR_13530 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SNOUR_19435 tsnR; 23S rRNA (adenosine1067-2'-O)-methyltransferase K05926 nhs; 23S rRNA (adenosine1067-2'-O)-methyltransferase [EC:2.1.1.230]
D SNOUR_31385 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SNOUR_31470 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SNOUR_30005 putative RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C SNOUR_23480 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C SNOUR_10575 GCN5-like N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C SNOUR_10620 acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C SNOUR_24435 GCN5-like N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C SNOUR_19875 alpha-L-glutamate ligase, RimK family protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
C SNOUR_36660 putative acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
C SNOUR_13630 rimM; 30S ribosomal subunit accessory protein K02860 rimM; 16S rRNA processing protein RimM
C SNOUR_13020 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C SNOUR_19365 thiazole/oxazole-forming peptide maturase, SagD family component K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
C SNOUR_19390 thiazole/oxazole-forming peptide maturase, SagD family component K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
B rRNA processing factors
C SNOUR_13740 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
C SNOUR_27335 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
C SNOUR_32965 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C SNOUR_27625 era; GTPase Era K03595 era; GTPase
C SNOUR_11380 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C SNOUR_15415 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C SNOUR_31510 der; GTPase Der K03977 engA; GTPase
C SNOUR_27350 obg; GTPase obg K03979 obgE; GTPase [EC:3.6.5.-]
C SNOUR_12805 ATP/GTP-binding protein K03665 hflX; GTPase
B Other maturation factors
C SNOUR_14800 Uncharacterized protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C SNOUR_12815 (p)ppGpp synthetase I SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C SNOUR_32890 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C SNOUR_13290 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C SNOUR_13315 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
C SNOUR_27410 ribosome silencing factor RsfS/YbeB/iojap K09710 ybeB; ribosome-associated protein
C SNOUR_27610 ybeY; Endoribonuclease K07042 ybeY; probable rRNA maturation factor
C SNOUR_16050 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
C SNOUR_13750 putative metal-binding protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024