+F Repair protein KO #

  DNA Repair and Recombination Proteins - Streptomyces noursei ATCC 11455

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D SNOUR_05465 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_10795 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_30540 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_37905 methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_37020 phr; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E SNOUR_06925 ung1; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E SNOUR_34905 ung2; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E SNOUR_31295 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E SNOUR_18860 mutY; A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E SNOUR_19595 nth; endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex E SNOUR_17915 ATP-dependent DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D SNOUR_15980 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_18275 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_35630 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_42725 NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_12340 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D SNOUR_05465 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_10795 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_30540 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_37905 methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D SNOUR_37020 phr; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D SNOUR_37895 2OG-Fe(II) oxygenase K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] C BER (base exicision repair) D DNA glycosylases E SNOUR_06925 ung1; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E SNOUR_34905 ung2; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E SNOUR_06090 G/U mismatch-specific uracil-DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] E SNOUR_05040 Uracil-DNA glycosylase superfamily protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E SNOUR_05470 DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E SNOUR_10800 alkA; DNA-3-methyladenine glycosylase II K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] E SNOUR_31295 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E SNOUR_18860 mutY; A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E SNOUR_15770 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E SNOUR_13735 mutM; DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E SNOUR_12990 nei; putative endonuclease 8 2 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] E SNOUR_27195 nei1; Endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] E SNOUR_19595 nth; endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E SNOUR_10980 exonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] E SNOUR_24520 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] E SNOUR_29795 nfo; Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] E SNOUR_09100 nfi; Endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7] D RecJ D DNA ligase E SNOUR_14180 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E SNOUR_30390 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E SNOUR_08490 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E SNOUR_30585 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A E SNOUR_30550 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E SNOUR_30630 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E SNOUR_15545 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E SNOUR_15565 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E SNOUR_17350 uvrD; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E SNOUR_30390 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E SNOUR_14180 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F SNOUR_23210 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F SNOUR_23215 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F SNOUR_00770 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F SNOUR_23390 rpoA1; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F SNOUR_43180 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F SNOUR_33075 RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F SNOUR_24795 mfd; bacterial transcription repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases E SNOUR_16075 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E SNOUR_16080 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E SNOUR_00520 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E SNOUR_03155 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E SNOUR_30045 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E SNOUR_43430 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E SNOUR_21235 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E SNOUR_27490 holB2; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E SNOUR_19450 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E SNOUR_11695 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E SNOUR_31070 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E SNOUR_32775 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] E SNOUR_19805 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E SNOUR_14180 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E SNOUR_15545 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E SNOUR_15565 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E SNOUR_17350 uvrD; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E SNOUR_00050 single-strand binding protein K03111 ssb; single-strand DNA-binding protein E SNOUR_20925 single-strand binding protein K03111 ssb; single-strand DNA-binding protein E SNOUR_21085 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein E SNOUR_26960 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein E SNOUR_43900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E SNOUR_26620 RecD/TraA family helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] E SNOUR_12915 recA; RecA recombinase K03553 recA; recombination protein RecA E SNOUR_32860 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA E SNOUR_32865 ruvB; Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E SNOUR_32855 ruvC; Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E SNOUR_20940 Endodeoxyribonuclease RusA K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] E SNOUR_33090 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E SNOUR_06155 exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50 E SNOUR_06160 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E SNOUR_12915 recA; RecA recombinase K03553 recA; recombination protein RecA E SNOUR_18835 radA; RadA-like DNA repair protein K04485 radA; DNA repair protein RadA/Sms E SNOUR_21245 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF E SNOUR_13770 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E SNOUR_27705 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E SNOUR_19795 recR; DNA replication and repair protein RecR K06187 recR; recombination protein RecR E SNOUR_31400 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) E SNOUR_32860 ruvA; Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA E SNOUR_32865 ruvB; Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E SNOUR_32855 ruvC; Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor E SNOUR_25295 CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D Archaeal homologous recombinant proteins E SNOUR_06155 exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50 E SNOUR_06160 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex E SNOUR_06540 Ku protein K10979 ku; DNA end-binding protein Ku E SNOUR_34005 Ku protein K10979 ku; DNA end-binding protein Ku E SNOUR_06535 DNA polymerase LigD, polymerase domain-containing protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] E SNOUR_10910 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F SNOUR_12465 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F SNOUR_21260 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F SNOUR_12495 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F SNOUR_21255 gyrBS; DNA gyrase subunit B, novobiocin-sensitive K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F SNOUR_19460 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F SNOUR_13830 histone protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta F SNOUR_25745 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F SNOUR_20950 RecT protein K07455 recT; recombination protein RecT F SNOUR_27705 recO; DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F SNOUR_19795 recR; DNA replication and repair protein RecR K06187 recR; recombination protein RecR F SNOUR_14180 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F SNOUR_12705 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F SNOUR_23900 ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F SNOUR_08490 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F SNOUR_30585 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A F SNOUR_30550 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D SNOUR_34420 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] C Other SOS response factors D SNOUR_12915 recA; RecA recombinase K03553 recA; recombination protein RecA D SNOUR_12770 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D SNOUR_31400 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D SNOUR_31665 DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D SNOUR_00050 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SNOUR_20925 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SNOUR_21085 ssb1; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein D SNOUR_26960 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D SNOUR_43900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D SNOUR_12910 recX; Regulatory protein RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase D SNOUR_06730 PHP domain-containing protein K02347 polX; DNA polymerase (family X) C DNA helicases D SNOUR_12775 dinG; DinG-like ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D SNOUR_12255 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D SNOUR_12985 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] C Modulation of nucleotide pools D SNOUR_15980 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_18275 putative NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_35630 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_42725 NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D SNOUR_31435 MutT/nudix family protein K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D SNOUR_12340 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D SNOUR_12760 nrdJ; ribonucleoside-diphosphate reductase class II K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SNOUR_15350 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D SNOUR_15355 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 5, 2025