+F Repair protein KO
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DNA Repair and Recombination Proteins - Solanum tuberosum (potato)
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 102597553 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 102605438 activating signal cointegrator 1 complex subunit 3 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 102578286 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 102588365 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 102599279 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 102598353 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 102596231 methyl-CpG-binding domain protein 4-like protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 102585160 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 102582844 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102596980 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102595176 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 102587879 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 102604894 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 102581685 uncharacterized LOC102581685 K03504 POLD3; DNA polymerase delta subunit 3
F 102605871 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
F 102606360 uncharacterized LOC102606360 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 102599922 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 102581718 DNA polymerase epsilon subunit 2 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 102603585 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 102581875 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 102602982 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 102604298 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 102582898 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 102604923 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 102578604 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 102582395 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 102604097 DNA polymerase beta K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 102598568 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 102581644 poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 102604711 poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 102589868 poly [ADP-ribose] polymerase 3-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 102584255 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 102599587 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 102577665 RAD23-like; uncharacterized LOC102577665 K10839 RAD23; UV excision repair protein RAD23
F 102593740 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 102604588 ubiquitin receptor RAD23d K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 102595356 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102583049 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107059797 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102605478 cullin-4-like K10609 CUL4; cullin 4
F 102585506 cullin-4-like K10609 CUL4; cullin 4
F 102579151 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 102582170 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 102604140 uncharacterized LOC102604140 K15082 RAD7; DNA repair protein RAD7
F 102598857 uncharacterized LOC102598857 K15082 RAD7; DNA repair protein RAD7
F 102586115 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 102584572 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
F 102593550 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 102590390 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 102597176 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 102598459 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 102578707 RPB1; DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 102581537 DNA-directed RNA polymerase II subunit RPB2-like K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 102592899 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 102598724 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 102583025 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 102594456 DNA-directed RNA polymerases IV and V subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 107061272 DNA-directed RNA polymerase II subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 102596627 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102597013 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102590791 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102585816 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102590023 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 102584130 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 102590696 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 102590066 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 102594913 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 102580987 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 102598466 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 102596451 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 102581010 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F 102595356 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102583049 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107059797 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 102605478 cullin-4-like K10609 CUL4; cullin 4
F 102585506 cullin-4-like K10609 CUL4; cullin 4
F 102579151 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 102590960 DNA excision repair protein ERCC-8 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 102595123 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 102584783 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 102579579 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 102585461 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 102587866 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 102589513 DNA repair helicase XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 102592877 DNA repair helicase XPB1-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 102581333 DNA repair helicase UVH6 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 102603411 probable RNA polymerase II transcription factor B subunit 1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 102581609 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 102601591 GTF2H2; general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 102595318 general transcription factor IIH subunit 3 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 102597627 general transcription factor IIH subunit 4 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 102604697 uncharacterized LOC102604697 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 102591981 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 102603534 cyclin-H1-1-like K06634 CCNH; cyclin H
E 102594849 cyclin-H1-1-like K06634 CCNH; cyclin H
E 102589938 uncharacterized LOC102589938 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 102580048 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102585520 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102589752 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 102590057 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 102587963 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 102600870 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 102606244 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 102603702 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 102590040 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 102586982 DNA repair protein UVH3 K10846 ERCC5; DNA excision repair protein ERCC-5
E 102604298 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 102585560 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 102605397 cullin-3A K03869 CUL3; cullin 3
E 102586525 cullin-3A-like K03869 CUL3; cullin 3
E 102603521 transcription elongation factor B polypeptide 1 K03872 ELOC; elongin-C
E 102586920 uncharacterized LOC102586920 K03873 ELOB; elongin-B
E 102593806 uncharacterized LOC102593806 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 102598532 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 102598298 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 102603118 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 102602160 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 102592720 MLH1; DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E 102596485 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
E 102597269 DNA mismatch repair protein MLH3 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 102604894 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 102581685 uncharacterized LOC102581685 K03504 POLD3; DNA polymerase delta subunit 3
E 102605871 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
E 102606360 uncharacterized LOC102606360 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 102580048 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102585520 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102589752 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 102590057 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 102587963 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 102600870 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 102606244 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 102604147 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 102581237 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 102583635 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 102603953 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 102578520 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 102597034 uncharacterized LOC102597034 K10756 RFC3_5; replication factor C subunit 3/5
E 107061912 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 102581875 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 102579780 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 102579493 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 102604298 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 102605009 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 102587218 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107059491 uncharacterized LOC107059491 K10865 MRE11; double-strand break repair protein MRE11
E 102580839 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 102581377 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA1-core complex
E 102589099 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 102579131 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 102585833 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 102596388 uncharacterized LOC102596388 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 102599655 BRCA1-A complex subunit BRE K12173 BRE; BRCA1-A complex subunit BRE
E 102592487 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 102582880 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 102594563 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 102603882 BRCT domain-containing protein At4g02110-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 102589639 DNA topoisomerase 2-binding protein 1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 102587218 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107059491 uncharacterized LOC107059491 K10865 MRE11; double-strand break repair protein MRE11
E 102580839 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 102581377 nijmegen breakage syndrome 1 protein K10867 NBN; nibrin
D BRCA complex
E 102591010 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 102587795 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 102587795 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 102578308 DNA repair protein RAD51 homolog 2 K10869 RAD51L1; RAD51-like protein 1
E 102588877 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 102587995 DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 102581295 DNA repair protein XRCC2 homolog K10879 XRCC2; DNA-repair protein XRCC2
E 102588226 DNA repair protein XRCC2 homolog K10879 XRCC2; DNA-repair protein XRCC2
E 102597626 DNA repair protein XRCC2 homolog K10879 XRCC2; DNA-repair protein XRCC2
E 102604185 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 102601709 uncharacterized LOC102601709 K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 102587460 uncharacterized LOC102587460 K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 102580628 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 102589702 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 102579983 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 102588195 protein chromatin remodeling 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107060415 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107060232 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107060234 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107062111 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107062849 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 102593600 mediator of RNA polymerase II transcription subunit 34-like K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 102600231 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 102598356 ATP-dependent DNA helicase Q-like SIM K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 102601604 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102581697 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102585773 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 102601604 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102581697 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102599971 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102584797 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102591019 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 102586282 uncharacterized LOC102586282 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 102580048 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102585520 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 102589752 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 102590057 replication protein A 32 kDa subunit A K10739 RFA2; replication factor A2
E 102587963 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 102600870 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 102606244 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 102597725 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 102594659 serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 102583086 serine/threonine-protein phosphatase 4 regulatory subunit 3 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 102602525 serine/threonine-protein phosphatase 4 regulatory subunit 3 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 102605092 uncharacterized LOC102605092 K19022 AP5B1; AP-5 complex subunit beta-1
E 102588486 uncharacterized LOC102588486 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 102605381 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 102601629 structural maintenance of chromosomes protein 6B K22804 SMC6; structural maintenance of chromosomes protein 6
E 102585398 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 102598833 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 102606189 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 102578384 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 102580492 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 102605541 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 102605330 crossover junction endonuclease EME1B-like K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 102588124 crossover junction endonuclease MUS81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 102591989 probable 26S proteasome complex subunit sem1-1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 102597488 structure-specific endonuclease subunit SLX1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 102598472 structure-specific endonuclease subunit SLX1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 102598638 flap endonuclease GEN-like 2 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 102595702 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 102604855 protein DDB_G0268328-like K19026 SPG11; spatacsin
E 102605407 uncharacterized LOC102605407 K19026 SPG11; spatacsin
E 102586412 protein DDB_G0276689 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 102602545 protein MRG1 K11339 MORF4L1; mortality factor 4-like protein 1
E 102581078 protein MRG1-like K11339 MORF4L1; mortality factor 4-like protein 1
E 102588509 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 102600460 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 102603889 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 102586723 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 102602785 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 102595089 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 102580926 DNA-dependent metalloprotease WSS1-like K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 102577544 PBF-2; DNA-binding protein p24 K26559 WHY1; single-stranded DNA-binding protein WHY1
E 102577630 StWHY2; Why2 protein K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 102580271 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 102579031 ATP-dependent DNA helicase 2 subunit KU80 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 102587218 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107059491 uncharacterized LOC107059491 K10865 MRE11; double-strand break repair protein MRE11
E 102580839 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 102578397 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 102589344 DNA repair protein XRCC4-like K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 102604097 DNA polymerase beta K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 102578604 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 102578785 uncharacterized LOC102578785 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 102601834 uncharacterized LOC102601834 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 102601597 E3 ubiquitin-protein ligase FANCL K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 102601608 uncharacterized LOC102601608 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 102604779 MHF histone-fold complex subunit 1 K11511 APITD1; centromere protein S
E 102599606 centromere protein X K15360 STRA13; centromere protein X
E 102578657 uncharacterized LOC102578657 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 102601604 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102581697 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 102599971 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102584797 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 102591019 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 102586282 uncharacterized LOC102586282 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 102589220 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 102598688 Fanconi anemia group I protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 102591010 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like K08775 BRCA2; breast cancer 2 susceptibility protein
E 102582880 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 102600013 fanconi-associated nuclease 1 homolog K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 102587795 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 102588877 DNA repair protein RAD51 homolog 3 K10870 RAD51L2; RAD51-like protein 2
E 102588760 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 102603653 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48
E 102578423 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 102600476 phytochrome-associated serine/threonine-protein phosphatase 3 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 102605875 phytochrome-associated serine/threonine-protein phosphatase 3-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 102587535 serine/threonine-protein phosphatase 6 regulatory subunit 3-like K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 102596683 serine/threonine-protein phosphatase 6 regulatory subunit 3-like K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 102603747 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 102593887 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 102585575 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 102605009 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 102599189 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 102583515 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 102599689 DNA repair protein REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 102591871 DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 102577800 ubiquitin carrier-like protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102583372 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102593648 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102577553 UbcE2; ubiquitin-conjugating enzyme-like protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102592500 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 102589663 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 102588387 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 102598495 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 102588901 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 102580207 ubiquitin-conjugating enzyme E2 variant 1B-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 102581905 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 102586208 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 102604957 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 102581875 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 102593069 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 102585546 uncharacterized LOC102585546 K10903 HUS1; HUS1 checkpoint protein
D 102578796 uncharacterized LOC102578796 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 102598005 cell cycle checkpoint protein RAD17 K06662 HRAD17; cell cycle checkpoint protein
D 102581237 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 102583635 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 102603953 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 102578520 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 102597034 uncharacterized LOC102597034 K10756 RFC3_5; replication factor C subunit 3/5
D 107061912 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 102578796 uncharacterized LOC102578796 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 102579745 protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 102588496 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 102588760 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 102605499 uncharacterized LOC102605499 K20403 TTI1; TELO2-interacting protein 1
D 102596581 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 102590172 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 102598035 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 102596182 serine/threonine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 102579744 14-3-3 protein 4 K06630 YWHAE; 14-3-3 protein epsilon
D 102580656 14-3-3-like protein-like K06630 YWHAE; 14-3-3 protein epsilon
D 102581950 14-3-3 protein 7 K06630 YWHAE; 14-3-3 protein epsilon
D 102588264 16R; 14-3-3-like protein 16R-like K06630 YWHAE; 14-3-3 protein epsilon
D 102582707 34G; 14-3-3-like protein C-like K06630 YWHAE; 14-3-3 protein epsilon
D 102580127 14-3-3; 14-3-3 protein 2-like K06630 YWHAE; 14-3-3 protein epsilon
D 102596432 14-3-3 protein 9 K06630 YWHAE; 14-3-3 protein epsilon
D 102600258 14-3-3 protein 8 K06630 YWHAE; 14-3-3 protein epsilon
D 102577702 RA215; 14-3-3 protein-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 102580766 35G; 14-3-3 protein 1 K06630 YWHAE; 14-3-3 protein epsilon
D 102595977 14-3-3 protein 7-like K06630 YWHAE; 14-3-3 protein epsilon
D 102586856 14-3-3 protein 10 K06630 YWHAE; 14-3-3 protein epsilon
D 102601986 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 102592152 uncharacterized LOC102592152 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 102594820 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102591366 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102604353 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102589768 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102589178 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102597551 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102590331 serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102592470 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 102591670 protein downstream neighbor of son homolog K22422 DONSON; protein downstream neighbor of Son
D 102603061 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 102603396 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 102588422 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 102578820 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 102597324 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 102597121 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 102581880 DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 102593845 DNA-directed primase/polymerase protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 102606437 5' exonuclease Apollo K15340 DCLRE1A; DNA cross-link repair 1A protein
D 102596611 uncharacterized LOC102596611 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 102587753 DNA cross-link repair protein SNM1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 102596374 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 102600414 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 102585556 endonuclease V K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 102603029 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 102577709 ZEN1; endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 102603473 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 102583290 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 102603050 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 102600710 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 102592190 pre-mRNA-processing factor 19 homolog 1-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 102589616 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 102605698 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 102583474 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
D 102589483 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 102590204 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102590520 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102601934 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102591126 uncharacterized LOC102591126 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102586441 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102604055 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102589306 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102585367 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 102602086 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 102605798 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 102601428 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 102578286 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 102588365 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 102588134 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 102594175 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 102599279 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 102598353 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 102594852 uncharacterized LOC102594852 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102589657 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102599707 DNA-3-methyladenine glycosylase-like K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102595001 probable GMP synthase [glutamine-hydrolyzing] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102594169 uncharacterized LOC102594169 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102598399 DNA-3-methyladenine glycosylase 1-like K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102604594 DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102587559 probable GMP synthase [glutamine-hydrolyzing] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 102584467 formamidopyrimidine-DNA glycosylase-like K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 102593307 formamidopyrimidine-DNA glycosylase-like K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 102582844 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102596980 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 102595176 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 102598756 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 102581629 DNA polymerase I B, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 102581629 DNA polymerase I B, chloroplastic/mitochondrial-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 4099994 rpoB; RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 4099930 rpoC2; RNA polymerase beta'' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 4099931 rpoC1; RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 4099876 rpoA; RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 102596642 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 102596968 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 102585921 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 102594430 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 102585921 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 102594430 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 102603127 DNA repair protein RadA homolog K04485 radA; DNA repair protein RadA/Sms
E 102583700 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 102598827 DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 102597444 DNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 102592601 ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 102585921 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 102594430 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 102596968 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 102590204 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102590520 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102601934 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102591126 uncharacterized LOC102591126 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 102586441 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102604055 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 102589306 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024